#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	LeftGene	LeftLocalBreakpoint	LeftBreakpoint	RightGene	RightLocalBreakpoint	RightBreakpoint	SpliceType	LargeAnchorSupport	NumCounterFusionLeft	NumCounterFusionRight	FAR_left	FAR_right	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	FFPM	microh_brkpt_dist	num_microh_near_brkpt
FGFR3--TACC3	1690	3	1690.00	3.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	27590	chr4:1739702:+	ONLY_REF_SPLICE	YES	40	958	41.32	1.77	GT	1.8892	AG	1.7819	17.3484	627	0
TMPRSS2--ERG	959	0	959.00	0.00	TMPRSS2^ENSG00000184012.14	4652	chr21:41508081:-	ERG^ENSG00000157554.19	28751	chr21:38584945:-	ONLY_REF_SPLICE	YES	4	37	192.00	25.26	GT	1.6895	AG	1.9219	9.827	1104	0
FGFR3--BAIAP2L1	402	3	402.00	3.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	BAIAP2L1^ENSG00000006453.14	16927	chr7:98362432:-	ONLY_REF_SPLICE	YES	40	31	9.90	12.69	GT	1.8892	AG	1.8062	4.1501	1171	0
LMNA--NTRK1	388	3	388.00	3.00	LMNA^ENSG00000160789.23	17733	chr1:156130773:+	NTRK1^ENSG00000198400.13	40289	chr1:156874906:+	ONLY_REF_SPLICE	YES	1863	85	0.21	4.56	GT	1.7465	AG	1.5058	4.0066	947	0
TPM3--NTRK1	382	2	382.00	2.00	TPM3^ENSG00000143549.21	13389	chr1:154170400:-	NTRK1^ENSG00000198400.13	42070	chr1:156874571:+	ONLY_REF_SPLICE	YES	3302	12	0.12	29.62	GT	1.9329	AG	1.6895	3.9349	355	0
NCOA4--RET	295	2	295.00	2.00	NCOA4^ENSG00000266412.6	9075	chr10:46012883:-	RET^ENSG00000165731.20	30127	chr10:43116584:+	ONLY_REF_SPLICE	YES	1124	182	0.26	1.63	GT	1.9086	AG	1.8323	3.0434	5144	0
CCDC6--RET	289	2	289.00	2.00	CCDC6^ENSG00000108091.11	1435	chr10:59906122:-	RET^ENSG00000165731.20	31587	chr10:43116584:+	ONLY_REF_SPLICE	YES	810	182	0.36	1.60	GT	1.8892	AG	1.8323	2.9819	2092	0
KIF5B--RET	277	2	277.00	2.00	KIF5B^ENSG00000170759.11	19977	chr10:32017143:-	RET^ENSG00000165731.20	38832	chr10:43114480:+	ONLY_REF_SPLICE	YES	571	6	0.49	40.00	GT	1.9656	AG	1.9656	2.859	3178	0
KIF5B--RET	3	0	3.00	0.00	KIF5B^ENSG00000170759.11	19970	chr10:32017150:-	RET^ENSG00000165731.20	38827	chr10:43114475:+	INCL_NON_REF_SPLICE	YES	591	0	0.01	4.00	CA	1.9656	CC	1.9656	0.0307	3187	0
ETV6--NTRK3	272	1	272.00	1.00	ETV6^ENSG00000139083.11	11237	chr12:11869969:+	NTRK3^ENSG00000140538.16	46238	chr15:87940753:-	ONLY_REF_SPLICE	YES	1023	4	0.27	54.80	GT	1.7819	AG	1.9656	2.7974	1252	0
SLC34A2--ROS1	260	6	260.00	6.00	SLC34A2^ENSG00000157765.13	6084	chr4:25664330:+	ROS1^ENSG00000047936.11	58025	chr6:117324415:-	ONLY_REF_SPLICE	YES	0	26	267.00	9.89	GT	1.8892	AG	1.7465	2.7258	999	0
CD74--ROS1	205	3	205.00	2.93	CD74^ENSG00000019582.16	4990	chr5:150404680:-	ROS1^ENSG00000047936.11	48731	chr6:117324415:-	ONLY_REF_SPLICE	YES	12050	34	0.02	5.97	GT	1.7819	AG	1.7465	2.1307	2407	0
CD74--ROS1	5	3	5.00	0.07	CD74^ENSG00000019582.16	4990	chr5:150404680:-	ROS1^ENSG00000047936.11	12652	chr6:117425920:-	INCL_NON_REF_SPLICE	NO	12050	0	0.00	9.00	GT	1.7819	TT	1.9656	0.0519	3298	0
EML4--ALK	178	0	178.00	0.00	EML4^ENSG00000143924.19	17400	chr2:42295516:+	ALK^ENSG00000171094.18	59003	chr2:29223528:-	ONLY_REF_SPLICE	YES	200	19	0.89	8.95	GT	1.6895	AG	1.9086	1.824	1550	0
TFG--NTRK1	125	1	125.00	1.00	TFG^ENSG00000114354.15	9135	chr3:100732672:+	NTRK1^ENSG00000198400.13	37655	chr1:156874571:+	ONLY_REF_SPLICE	YES	665	12	0.19	9.77	GT	1.9329	AG	1.6895	1.2911	883	0
SLC45A3--BRAF	124	0	124.00	0.00	SLC45A3^ENSG00000158715.6	1116	chr1:205680394:-	BRAF^ENSG00000157764.14	25172	chr7:140794467:-	ONLY_REF_SPLICE	YES	0	529	125.00	0.24	GT	1.5628	AG	1.7465	1.2706	2599	0
PAX8--PPARG	117	0	117.00	0.00	PAX8^ENSG00000125618.18	9714	chr2:113235394:-	PPARG^ENSG00000132170.23	31404	chr3:12379704:+	ONLY_REF_SPLICE	YES	25	7	4.54	14.75	GT	1.8295	AG	1.9329	1.1989	1923	0
EGFR--SEPTIN14	110	1	110.00	1.00	EGFR^ENSG00000146648.19	30734	chr7:55200413:+	SEPTIN14^ENSG00000154997.9	54769	chr7:55796092:-	ONLY_REF_SPLICE	YES	1	4	56.00	22.40	GT	1.8892	AG	1.9899	1.1374	658	0
PAPOLA--TPM3	13	0	13.00	0.00	PAPOLA^ENSG00000090060.18	2168	chr14:96502600:+	TPM3^ENSG00000143549.21	57001	chr1:154157721:-	ONLY_REF_SPLICE	YES	253	3546	0.06	0.00	GT	1.9219	AG	1.7232	0.1332	2337	0
IPCEF1--TCF12	3	0	3.00	0.00	IPCEF1^ENSG00000074706.13	14861	chr6:154199668:-	TCF12^ENSG00000140262.18	30078	chr15:57063750:+	ONLY_REF_SPLICE	YES	328	767	0.01	0.01	GT	1.7968	AG	1.5656	0.0307	3487	0
NDUFB2--MROH1	3	0	3.00	0.00	NDUFB2^ENSG00000090266.13	2961	chr7:140696842:+	MROH1^ENSG00000179832.17	20298	chr8:144168295:+	ONLY_REF_SPLICE	YES	1017	280	0.00	0.01	GT	1.8892	AG	1.7232	0.0307	188	0
MYO19--FERMT3	2	0	2.00	0.00	MYO19^ENSG00000278259.5	9228	chr17:36525228:-	FERMT3^ENSG00000149781.13	39728	chr11:64223048:+	ONLY_REF_SPLICE	YES	243	981	0.01	0.00	GT	1.7465	AG	1.8892	0.0205	130	0
RAD54B--LYN	2	0	2.00	0.00	RAD54B^ENSG00000197275.14	3894	chr8:94458268:-	LYN^ENSG00000254087.8	34606	chr8:55966715:+	ONLY_REF_SPLICE	YES	66	667	0.04	0.00	GT	1.7819	AG	1.7465	0.0205	2829	0
RPS6KA1--RBCK1	2	0	2.00	0.00	RPS6KA1^ENSG00000117676.14	8219	chr1:26547270:+	RBCK1^ENSG00000125826.21	38484	chr20:430350:+	ONLY_REF_SPLICE	YES	573	611	0.01	0.00	GT	1.7819	AG	1.5656	0.0205	224	0
SNX29--CLEC16A	2	0	2.00	0.00	SNX29^ENSG00000048471.14	23845	chr16:12356279:+	CLEC16A^ENSG00000038532.16	44763	chr16:10969161:+	ONLY_REF_SPLICE	YES	525	134	0.01	0.02	GT	1.8323	AG	1.7465	0.0205	3465	0
ZDHHC20--SELENOF	2	0	2.00	0.00	ZDHHC20^ENSG00000180776.16	1317	chr13:21459054:-	SELENOF^ENSG00000183291.17	29893	chr1:86863605:-	ONLY_REF_SPLICE	YES	422	786	0.01	0.00	GT	1.7819	AG	1.8892	0.0205	6625	0