File Info
- Filename
- V4_0001_RNA_0005_23H5VFLT4_s34.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23H5VFLT4/nfcore_rnafusion_100M__5f1fa79--20260304-093157/fusioninspector/V4_0001_RNA_0005_23H5VFLT4_s34.FusionInspector.fusions.abridged.tsv
- Size
- 5.7 KB
- Workflow Run
- dev_rna_exp0001_5f1fa79
- Published
- Mar 04, 2026 3:37 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 1623 | 3 | 1623.00 | 2.99 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 44 | 914 | 36.16 | 1.78 | GT | 1.8892 | AG | 1.7819 | 16.6755 | 627 | 0 |
| FGFR3--TACC3 | 6 | 3 | 6.00 | 0.01 | FGFR3^ENSG00000068078.20 | 9880 | chr4:1806936:+ | TACC3^ENSG00000013810.20 | 27593 | chr4:1739705:+ | INCL_NON_REF_SPLICE | YES | 16 | 942 | 0.59 | 0.01 | GA | 1.8892 | TA | 1.5219 | 0.0616 | 623 | 0 |
| TMPRSS2--ERG | 1045 | 0 | 1045.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 6 | 28 | 149.43 | 36.07 | GT | 1.6895 | AG | 1.9219 | 10.717 | 1104 | 0 |
| LMNA--NTRK1 | 518 | 6 | 518.00 | 6.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 1843 | 87 | 0.28 | 5.97 | GT | 1.7465 | AG | 1.5058 | 5.3739 | 947 | 0 |
| ETV6--NTRK3 | 460 | 3 | 460.00 | 3.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 987 | 1 | 0.47 | 232.00 | GT | 1.7819 | AG | 1.9656 | 4.7484 | 1252 | 0 |
| FGFR3--BAIAP2L1 | 425 | 2 | 425.00 | 2.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 45 | 18 | 9.30 | 22.53 | GT | 1.8892 | AG | 1.8062 | 4.3791 | 1171 | 0 |
| TPM3--NTRK1 | 396 | 2 | 396.00 | 2.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 3325 | 12 | 0.12 | 30.69 | GT | 1.9329 | AG | 1.6895 | 4.0817 | 355 | 0 |
| NCOA4--RET | 334 | 0 | 334.00 | 0.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1105 | 167 | 0.30 | 1.99 | GT | 1.9086 | AG | 1.8323 | 3.4254 | 5144 | 0 |
| CCDC6--RET | 298 | 5 | 298.00 | 5.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 752 | 167 | 0.40 | 1.81 | GT | 1.8892 | AG | 1.8323 | 3.1075 | 2092 | 0 |
| KIF5B--RET | 254 | 1 | 254.00 | 1.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 536 | 4 | 0.48 | 51.20 | GT | 1.9656 | AG | 1.9656 | 2.6152 | 3178 | 0 |
| SLC34A2--ROS1 | 252 | 3 | 252.00 | 3.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 14 | 256.00 | 17.07 | GT | 1.8892 | AG | 1.7465 | 2.6152 | 999 | 0 |
| EML4--ALK | 229 | 0 | 229.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 211 | 38 | 1.08 | 5.90 | GT | 1.6895 | AG | 1.9086 | 2.3485 | 1550 | 0 |
| CD74--ROS1 | 221 | 6 | 221.00 | 6.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 11814 | 13 | 0.02 | 16.29 | GT | 1.7819 | AG | 1.7465 | 2.328 | 2407 | 0 |
| PAX8--PPARG | 176 | 0 | 176.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 27 | 5 | 6.32 | 29.50 | GT | 1.8295 | AG | 1.9329 | 1.805 | 1923 | 0 |
| PAX8--PPARG | 4 | 0 | 4.00 | 0.00 | PAX8^ENSG00000125618.18 | 9708 | chr2:113235400:- | PPARG^ENSG00000132170.23 | 31399 | chr3:12379699:+ | INCL_NON_REF_SPLICE | YES | 28 | 4 | 0.17 | 1.00 | TC | 1.5329 | CT | 1.8892 | 0.041 | 1929 | 0 |
| PAX8--PPARG | 3 | 0 | 3.00 | 0.00 | PAX8^ENSG00000125618.18 | 9707 | chr2:113235401:- | PPARG^ENSG00000132170.23 | 31400 | chr3:12379700:+ | INCL_NON_REF_SPLICE | YES | 28 | 4 | 0.14 | 0.80 | CT | 1.6895 | TT | 1.9219 | 0.0308 | 1930 | 0 |
| TFG--NTRK1 | 153 | 0 | 153.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 701 | 12 | 0.22 | 11.85 | GT | 1.9329 | AG | 1.6895 | 1.5691 | 883 | 0 |
| SLC45A3--BRAF | 126 | 0 | 126.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 1 | 530 | 63.50 | 0.24 | GT | 1.5628 | AG | 1.7465 | 1.2922 | 2599 | 0 |
| EGFR--SEPTIN14 | 114 | 1 | 114.00 | 1.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 2 | 2 | 38.67 | 38.67 | GT | 1.8892 | AG | 1.9899 | 1.1794 | 658 | 0 |
| AC105105.1--MALT1 | 4 | 0 | 4.00 | 0.00 | AC105105.1^ENSG00000267257.1 | 2246 | chr18:58536660:+ | MALT1^ENSG00000172175.15 | 35537 | chr18:58659863:+ | INCL_NON_REF_SPLICE | YES | 302 | 1 | 0.02 | 2.50 | GT | 1.9086 | AG | 1.9086 | 0.041 | 290 | 0 |
| AC105105.1--MALT1 | 4 | 0 | 4.00 | 0.00 | AC105105.1^ENSG00000267257.1 | 2246 | chr18:58536660:+ | MALT1^ENSG00000172175.15 | 56844 | chr18:58681170:+ | INCL_NON_REF_SPLICE | YES | 302 | 736 | 0.02 | 0.01 | GT | 1.9086 | AG | 1.9899 | 0.041 | 227 | 0 |
| ATF6--DPY19L1 | 4 | 0 | 4.00 | 0.00 | ATF6^ENSG00000118217.7 | 17558 | chr1:161863312:+ | DPY19L1^ENSG00000173852.15 | 40998 | chr7:35018596:- | ONLY_REF_SPLICE | YES | 324 | 42 | 0.02 | 0.12 | GT | 1.9086 | AG | 1.8892 | 0.041 | 746 | 0 |
| DIS3L--ATP5F1C | 3 | 0 | 3.00 | 0.00 | DIS3L^ENSG00000166938.13 | 2925 | chr15:66295141:+ | ATP5F1C^ENSG00000165629.20 | 30268 | chr10:7806974:+ | ONLY_REF_SPLICE | YES | 154 | 882 | 0.03 | 0.00 | GT | 1.7056 | AG | 1.7465 | 0.0308 | 4211 | 0 |
| PKHD1L1--UBR5 | 3 | 0 | 3.00 | 0.00 | PKHD1L1^ENSG00000205038.12 | 79973 | chr8:109527020:+ | UBR5^ENSG00000104517.13 | 97218 | chr8:102345545:- | ONLY_REF_SPLICE | YES | 154 | 819 | 0.03 | 0.00 | GT | 1.5628 | AG | 1.9219 | 0.0308 | 2329 | 0 |
| TMEM123--SIK3 | 3 | 0 | 3.00 | 0.00 | TMEM123^ENSG00000152558.15 | 5490 | chr11:102448812:- | SIK3^ENSG00000160584.16 | 15590 | chr11:116957064:- | ONLY_REF_SPLICE | YES | 527 | 270 | 0.01 | 0.01 | GT | 1.9656 | AG | 1.9656 | 0.0308 | 2303 | 0 |
| TUBB4B--MKI67 | 2 | 0 | 2.00 | 0.00 | TUBB4B^ENSG00000188229.6 | 1131 | chr9:137241417:+ | MKI67^ENSG00000148773.14 | 9559 | chr10:128119319:- | ONLY_REF_SPLICE | YES | 703 | 406 | 0.00 | 0.01 | GT | 1.8256 | AG | 1.4566 | 0.0205 | 1116 | 0 |
| STK10--PTPN7 | 1 | 0 | 1.00 | 0.00 | STK10^ENSG00000072786.13 | 17619 | chr5:172064720:- | PTPN7^ENSG00000143851.15 | 36481 | chr1:202157820:- | ONLY_REF_SPLICE | YES | 207 | 288 | 0.01 | 0.01 | GT | 1.8892 | AG | 1.5656 | 0.0103 | 971 | 0 |
| TMEM135--TTC17 | 1 | 0 | 1.00 | 0.00 | TMEM135^ENSG00000166575.17 | 7196 | chr11:87236684:+ | TTC17^ENSG00000052841.15 | 31411 | chr11:43379233:+ | ONLY_REF_SPLICE | YES | 164 | 257 | 0.01 | 0.01 | GT | 1.7232 | AG | 1.9899 | 0.0103 | 2611 | 0 |
29 rows