#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	LeftGene	LeftLocalBreakpoint	LeftBreakpoint	RightGene	RightLocalBreakpoint	RightBreakpoint	SpliceType	LargeAnchorSupport	NumCounterFusionLeft	NumCounterFusionRight	FAR_left	FAR_right	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	FFPM	microh_brkpt_dist	num_microh_near_brkpt
TMPRSS2--ERG	143	0	143.00	0.00	TMPRSS2^ENSG00000184012.14	4652	chr21:41508081:-	ERG^ENSG00000157554.19	28751	chr21:38584945:-	ONLY_REF_SPLICE	YES	0	10	144.00	13.09	GT	1.6895	AG	1.9219	1.4661	1104	0
FGFR3--TACC3	120	0	120.00	0.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	27590	chr4:1739702:+	ONLY_REF_SPLICE	YES	5	302	20.17	0.40	GT	1.8892	AG	1.7819	1.2303	627	0
ETV6--NTRK3	81	0	81.00	0.00	ETV6^ENSG00000139083.11	11237	chr12:11869969:+	NTRK3^ENSG00000140538.16	46238	chr15:87940753:-	ONLY_REF_SPLICE	YES	491	0	0.17	82.00	GT	1.7819	AG	1.9656	0.8305	1252	0
FGFR3--BAIAP2L1	50	0	50.00	0.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	BAIAP2L1^ENSG00000006453.14	16927	chr7:98362432:-	ONLY_REF_SPLICE	YES	5	12	8.50	3.92	GT	1.8892	AG	1.8062	0.5126	1171	0
NCOA4--RET	46	0	46.00	0.00	NCOA4^ENSG00000266412.6	9075	chr10:46012883:-	RET^ENSG00000165731.20	30127	chr10:43116584:+	ONLY_REF_SPLICE	YES	357	15	0.13	2.94	GT	1.9086	AG	1.8323	0.4716	5144	0
LMNA--NTRK1	40	0	40.00	0.00	LMNA^ENSG00000160789.23	17733	chr1:156130773:+	NTRK1^ENSG00000198400.13	40289	chr1:156874906:+	ONLY_REF_SPLICE	YES	334	13	0.12	2.93	GT	1.7465	AG	1.5058	0.4101	947	0
PAX8--PPARG	28	0	28.00	0.00	PAX8^ENSG00000125618.18	9714	chr2:113235394:-	PPARG^ENSG00000132170.23	31404	chr3:12379704:+	ONLY_REF_SPLICE	YES	4	4	5.80	5.80	GT	1.8295	AG	1.9329	0.2871	1923	0
TPM3--NTRK1	18	0	18.00	0.00	TPM3^ENSG00000143549.21	13389	chr1:154170400:-	NTRK1^ENSG00000198400.13	42070	chr1:156874571:+	ONLY_REF_SPLICE	YES	1358	1	0.01	9.50	GT	1.9329	AG	1.6895	0.1845	355	0
SLC34A2--ROS1	16	1	16.00	1.00	SLC34A2^ENSG00000157765.13	6084	chr4:25664330:+	ROS1^ENSG00000047936.11	58025	chr6:117324415:-	ONLY_REF_SPLICE	YES	0	2	18.00	6.00	GT	1.8892	AG	1.7465	0.1743	999	0
SLC34A2--ROS1	3	0	3.00	0.00	SLC34A2^ENSG00000157765.13	6088	chr4:25664334:+	ROS1^ENSG00000047936.11	58028	chr6:117324412:-	INCL_NON_REF_SPLICE	YES	0	2	4.00	1.33	GA	1.7465	TG	1.8892	0.0308	1002	0
SLC45A3--BRAF	16	0	16.00	0.00	SLC45A3^ENSG00000158715.6	1116	chr1:205680394:-	BRAF^ENSG00000157764.14	25172	chr7:140794467:-	ONLY_REF_SPLICE	YES	0	262	17.00	0.06	GT	1.5628	AG	1.7465	0.164	2599	0
CCDC6--RET	14	0	14.00	0.00	CCDC6^ENSG00000108091.11	1435	chr10:59906122:-	RET^ENSG00000165731.20	31587	chr10:43116584:+	ONLY_REF_SPLICE	YES	297	15	0.05	0.94	GT	1.8892	AG	1.8323	0.1435	2092	0
KIF5B--RET	13	0	13.00	0.00	KIF5B^ENSG00000170759.11	19977	chr10:32017143:-	RET^ENSG00000165731.20	38832	chr10:43114480:+	ONLY_REF_SPLICE	YES	172	2	0.08	4.67	GT	1.9656	AG	1.9656	0.1333	3178	0
CD74--ROS1	12	0	12.00	0.00	CD74^ENSG00000019582.16	4990	chr5:150404680:-	ROS1^ENSG00000047936.11	48731	chr6:117324415:-	ONLY_REF_SPLICE	YES	7015	2	0.00	4.33	GT	1.7819	AG	1.7465	0.123	2407	0
EGFR--SEPTIN14	12	0	12.00	0.00	EGFR^ENSG00000146648.19	30734	chr7:55200413:+	SEPTIN14^ENSG00000154997.9	54769	chr7:55796092:-	ONLY_REF_SPLICE	YES	0	0	13.00	13.00	GT	1.8892	AG	1.9899	0.123	658	0
FBXO25--SEPTIN14	11	0	11.00	0.00	FBXO25^ENSG00000147364.17	7247	chr8:435707:+	SEPTIN14^ENSG00000154997.9	37100	chr7:55796092:-	ONLY_REF_SPLICE	YES	24	0	0.48	12.00	GT	1.7819	AG	1.9899	0.1128	750	0
TFG--NTRK1	4	0	4.00	0.00	TFG^ENSG00000114354.15	9135	chr3:100732672:+	NTRK1^ENSG00000198400.13	37655	chr1:156874571:+	ONLY_REF_SPLICE	YES	158	1	0.03	2.50	GT	1.9329	AG	1.6895	0.041	883	0
ACAP2--SENP7	3	0	3.00	0.00	ACAP2^ENSG00000114331.15	1250	chr3:195442795:-	SENP7^ENSG00000138468.16	44510	chr3:101459052:-	ONLY_REF_SPLICE	YES	198	152	0.02	0.03	GT	1.6729	AG	1.8323	0.0308	5800	0
EML4--ALK	3	0	3.00	0.00	EML4^ENSG00000143924.19	17400	chr2:42295516:+	ALK^ENSG00000171094.18	59003	chr2:29223528:-	ONLY_REF_SPLICE	YES	90	4	0.04	0.80	GT	1.6895	AG	1.9086	0.0308	1550	0
USP45--CDK19	3	0	3.00	0.00	USP45^ENSG00000123552.18	13511	chr6:99476143:-	CDK19^ENSG00000155111.15	35336	chr6:110773937:-	ONLY_REF_SPLICE	YES	63	24	0.06	0.16	GT	1.2419	AG	1.9656	0.0308	1665	0
CLDN15--FIS1	2	0	2.00	0.00	CLDN15^ENSG00000106404.14	2456	chr7:101237365:-	FIS1^ENSG00000214253.9	13802	chr7:101240906:-	ONLY_REF_SPLICE	YES	62	326	0.05	0.01	GT	1.5656	AG	1.9329	0.0205	893	0
VRK2--FANCL	2	0	2.00	0.00	VRK2^ENSG00000028116.18	21870	chr2:58146474:+	FANCL^ENSG00000115392.12	37353	chr2:58165874:-	ONLY_REF_SPLICE	YES	171	59	0.02	0.05	GT	1.8892	AG	1.9329	0.0205	2725	0
ZDHHC21--PCNT	2	0	2.00	0.00	ZDHHC21^ENSG00000175893.12	10198	chr9:14658749:-	PCNT^ENSG00000160299.17	31467	chr21:46349012:+	ONLY_REF_SPLICE	YES	67	44	0.04	0.07	GT	1.7465	AG	1.8892	0.0205	4839	0
AMFR--RBL2	1	0	1.00	0.00	AMFR^ENSG00000159461.15	3969	chr16:56414252:-	RBL2^ENSG00000103479.17	24853	chr16:53439016:+	ONLY_REF_SPLICE	YES	169	148	0.01	0.01	GT	1.6895	AG	1.9086	0.0103	1073	0
RBL2--AMFR	1	0	1.00	0.00	RBL2^ENSG00000103479.17	19867	chr16:53470922:+	AMFR^ENSG00000159461.15	42040	chr16:56369327:-	ONLY_REF_SPLICE	YES	112	153	0.02	0.01	GT	1.8256	AG	1.9329	0.0103	347	0