File Info
- Filename
- V4_0001_RNA_0005_23H5VFLT4_s25.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23H5VFLT4/nfcore_rnafusion_100M__5f1fa79--20260304-093157/fusioninspector/V4_0001_RNA_0005_23H5VFLT4_s25.FusionInspector.fusions.abridged.tsv
- Size
- 5.5 KB
- Workflow Run
- dev_rna_exp0001_5f1fa79
- Published
- Mar 04, 2026 3:41 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 2137 | 4 | 2137.00 | 3.99 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 36 | 1092 | 57.89 | 1.96 | GT | 1.8892 | AG | 1.7819 | 21.8144 | 627 | 0 |
| FGFR3--TACC3 | 3 | 4 | 3.00 | 0.01 | FGFR3^ENSG00000068078.20 | 9872 | chr4:1806928:+ | TACC3^ENSG00000013810.20 | 27586 | chr4:1739698:+ | INCL_NON_REF_SPLICE | NO | 123 | 1065 | 0.06 | 0.01 | AC | 1.8892 | GA | 1.7819 | 0.0307 | 633 | 0 |
| TMPRSS2--ERG | 1304 | 0 | 1304.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 0 | 37 | 1305.00 | 34.34 | GT | 1.6895 | AG | 1.9219 | 13.2864 | 1104 | 0 |
| LMNA--NTRK1 | 687 | 3 | 687.00 | 3.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 2327 | 128 | 0.30 | 5.36 | GT | 1.7465 | AG | 1.5058 | 7.0304 | 947 | 0 |
| LMNA--NTRK1 | 3 | 1 | 3.00 | 0.00 | LMNA^ENSG00000160789.23 | 17734 | chr1:156130774:+ | NTRK1^ENSG00000198400.13 | 40292 | chr1:156874909:+ | INCL_NON_REF_SPLICE | YES | 2325 | 150 | 0.00 | 0.03 | TG | 1.7465 | TC | 1.4566 | 0.0306 | 949 | 0 |
| FGFR3--BAIAP2L1 | 584 | 2 | 584.00 | 2.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 37 | 25 | 15.45 | 22.58 | GT | 1.8892 | AG | 1.8062 | 5.9707 | 1171 | 0 |
| NCOA4--RET | 504 | 4 | 504.00 | 4.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1371 | 257 | 0.37 | 1.97 | GT | 1.9086 | AG | 1.8323 | 5.176 | 5144 | 0 |
| TPM3--NTRK1 | 498 | 2 | 498.00 | 2.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 3299 | 16 | 0.15 | 29.47 | GT | 1.9329 | AG | 1.6895 | 5.0945 | 355 | 0 |
| ETV6--NTRK3 | 474 | 1 | 474.00 | 1.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1156 | 7 | 0.41 | 59.50 | GT | 1.7819 | AG | 1.9656 | 4.8397 | 1252 | 0 |
| SLC34A2--ROS1 | 389 | 9 | 389.00 | 9.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 19 | 399.00 | 19.95 | GT | 1.8892 | AG | 1.7465 | 4.0552 | 999 | 0 |
| CCDC6--RET | 386 | 2 | 386.00 | 2.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 939 | 257 | 0.41 | 1.51 | GT | 1.8892 | AG | 1.8323 | 3.9533 | 2092 | 0 |
| KIF5B--RET | 377 | 2 | 377.00 | 2.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 622 | 5 | 0.61 | 63.33 | GT | 1.9656 | AG | 1.9656 | 3.8616 | 3178 | 0 |
| EML4--ALK | 297 | 0 | 297.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 204 | 27 | 1.45 | 10.64 | GT | 1.6895 | AG | 1.9086 | 3.0261 | 1550 | 0 |
| CD74--ROS1 | 266 | 4 | 266.00 | 4.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 11884 | 18 | 0.02 | 14.26 | GT | 1.7819 | AG | 1.7465 | 2.7511 | 2407 | 0 |
| SLC45A3--BRAF | 220 | 0 | 220.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 552 | 221.00 | 0.40 | GT | 1.5628 | AG | 1.7465 | 2.2416 | 2599 | 0 |
| PAX8--PPARG | 200 | 0 | 200.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 29 | 4 | 6.70 | 40.20 | GT | 1.8295 | AG | 1.9329 | 2.0378 | 1923 | 0 |
| TFG--NTRK1 | 160 | 0 | 160.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 731 | 16 | 0.22 | 9.47 | GT | 1.9329 | AG | 1.6895 | 1.6302 | 883 | 0 |
| EGFR--SEPTIN14 | 135 | 3 | 135.00 | 3.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 2 | 3 | 46.33 | 34.75 | GT | 1.8892 | AG | 1.9899 | 1.4061 | 658 | 0 |
| ABCF1--TCP1 | 2 | 0 | 2.00 | 0.00 | ABCF1^ENSG00000204574.14 | 8099 | chr6:30584566:+ | TCP1^ENSG00000120438.12 | 19510 | chr6:159788143:- | ONLY_REF_SPLICE | YES | 536 | 1121 | 0.01 | 0.00 | GT | 1.8062 | AG | 1.8892 | 0.0204 | 809 | 0 |
| ELL--KDM4B | 2 | 0 | 2.00 | 0.00 | ELL^ENSG00000105656.13 | 1196 | chr19:18521921:- | KDM4B^ENSG00000127663.15 | 25220 | chr19:5047476:+ | ONLY_REF_SPLICE | YES | 360 | 266 | 0.01 | 0.01 | GT | 1.8062 | AG | 1.7968 | 0.0204 | 3628 | 0 |
| GTF2H3--ITGB3BP | 2 | 0 | 2.00 | 0.00 | GTF2H3^ENSG00000111358.14 | 3980 | chr12:123645561:+ | ITGB3BP^ENSG00000142856.17 | 28258 | chr1:63454968:- | ONLY_REF_SPLICE | YES | 310 | 97 | 0.01 | 0.03 | GT | 1.8295 | AG | 1.8295 | 0.0204 | 1604 | 0 |
| OSBPL9--NRF1 | 2 | 0 | 2.00 | 0.00 | OSBPL9^ENSG00000117859.19 | 4611 | chr1:51617221:+ | NRF1^ENSG00000106459.15 | 44677 | chr7:129657346:+ | ONLY_REF_SPLICE | YES | 113 | 90 | 0.03 | 0.03 | GT | 1.7465 | AG | 1.8892 | 0.0204 | 1704 | 0 |
| TMTC3--ZFC3H1 | 2 | 0 | 2.00 | 0.00 | TMTC3^ENSG00000139324.12 | 11223 | chr12:88176319:+ | ZFC3H1^ENSG00000133858.17 | 29952 | chr12:71647813:- | ONLY_REF_SPLICE | YES | 41 | 147 | 0.07 | 0.02 | GT | 1.9219 | AG | 1.6729 | 0.0204 | 1903 | 0 |
| CLN6--TBCD | 1 | 0 | 1.00 | 0.00 | CLN6^ENSG00000128973.13 | 5006 | chr15:68218536:- | TBCD^ENSG00000141556.21 | 52249 | chr17:82920556:+ | ONLY_REF_SPLICE | YES | 611 | 340 | 0.00 | 0.01 | GT | 1.8892 | AG | 1.4566 | 0.0102 | 1696 | 0 |
| CLN6--TBCD | 1 | 0 | 1.00 | 0.00 | CLN6^ENSG00000128973.13 | 10802 | chr15:68211263:- | TBCD^ENSG00000141556.21 | 25245 | chr17:82797757:+ | ONLY_REF_SPLICE | YES | 535 | 225 | 0.00 | 0.01 | GT | 1.8892 | AG | 1.6402 | 0.0102 | 1054 | 0 |
| EFR3A--ASAP1 | 1 | 0 | 1.00 | 0.00 | EFR3A^ENSG00000132294.15 | 1230 | chr8:131904322:+ | ASAP1^ENSG00000153317.15 | 51277 | chr8:130169067:- | ONLY_REF_SPLICE | YES | 922 | 39 | 0.00 | 0.05 | GT | 1.7232 | AG | 1.8295 | 0.0102 | 4372 | 0 |
| ZKSCAN7-AS1--DNMT3A | 1 | 0 | 1.00 | 0.00 | ZKSCAN7-AS1^ENSG00000236869.1 | 1095 | chr3:44685559:- | DNMT3A^ENSG00000119772.17 | 13292 | chr2:25275087:- | ONLY_REF_SPLICE | YES | 0 | 121 | 2.00 | 0.02 | GT | 1.7465 | AG | 1.2729 | 0.0102 | 2927 | 0 |
28 rows