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Filename
V4_0001_RNA_0005_23H5VFLT4_s43.starfusion.starfusion.fusion_predictions.filter_summary.txt
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23H5VFLT4/nfcore_rnafusion_100M__5f1fa79--20260304-093157/starfusion/V4_0001_RNA_0005_23H5VFLT4_s43.starfusion.starfusion.fusion_predictions.filter_summary.txt
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1.0 KB
Published
Mar 04, 2026 5:42 PM
STAR-FUSION FILTERING SUMMARY
================================================================================

Input file: V4_0001_RNA_0005_23H5VFLT4_s43.starfusion.starfusion.fusion_predictions.tsv
Blacklist: blacklist_hg38_GRCh38_v2.4.0.tsv.gz
Filter config: starfusion_filter_config.yaml
Output file: V4_0001_RNA_0005_23H5VFLT4_s43.starfusion.starfusion.fusion_predictions.filter_summary.tsv

Total fusions: 2114
Pass (CALL=1): 16 (0.8%)
Fail (CALL=0): 2098 (99.2%)

Blacklist Flagging:
  Total blacklisted: 106
  All blacklisted fusions have CALL=0

Failure Reasons:
  Read count too low: 1 < 5: 1231
  Excluded SpliceType: INCL_NON_REF_SPLICE: 709
  Blacklisted: 106
  Read count too low: 2 < 5: 19
  Excluded annotation pattern: HGNC_GENEFAM: 19
  Excluded annotation pattern: GTEx_recurrent_StarF2019: 7
  Excluded annotation pattern: DGD_PARALOGS: 4
  Read count too low: 3 < 5: 2
  Excluded annotation pattern: ConjoinG: 1

Breakdown by SpliceType:
  INCL_NON_REF_SPLICE: 0 pass, 751 fail (total: 751)
  ONLY_REF_SPLICE: 16 pass, 1347 fail (total: 1363)