File Info

Filename
V4_0001_RNA_0005_23H5VFLT4_s43.starfusion.starfusion.fusion_predictions.filtered.tsv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23H5VFLT4/nfcore_rnafusion_100M__5f1fa79--20260304-093157/starfusion/V4_0001_RNA_0005_23H5VFLT4_s43.starfusion.starfusion.fusion_predictions.filtered.tsv
Size
846.6 KB
Workflow Run
dev_rna_exp0001_5f1fa79
Published
Mar 04, 2026 5:42 PM

Content

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#FusionName JunctionReadCount SpanningFragCount est_J est_S SpliceType LeftGene LeftBreakpoint RightGene RightBreakpoint JunctionReads SpanningFrags LargeAnchorSupport FFPM LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy annots breakpoint_ID blacklisted blacklist_reasons CALL filter_reason FILTER total_reads
FGFR3--TACC3 221 5 221.0 5.0 ONLY_REF_SPLICE FGFR3^ENSG00000068078.20 chr4:1806934:+ TACC3^ENSG00000013810.20 chr4:1739702:+ 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&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1284:10708:1112,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1495:21241:21654,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1470:48140:25395,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2139:44006:10612,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2476:37874:10360 YES_LDAS 2.3121 GT 1.8892 AG 1.7819 "[""ChimerKB"",""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""YOSHIHARA_TCGA"",""Klijn_CellLines"",""DEEPEST2019"",""GUO2018CR_TCGA"",""ChimerPub"",""TumorFusionsNAR2018"",""Cosmic"",""INTRACHROMOSOMAL[chr4:0.05Mb]"",""LOCAL_REARRANGEMENT:+:[48122]""]" chr4:1806934-chr4:1739702 False 1 PASS 226
TMPRSS2--ERG 98 0 98.0 0.0 ONLY_REF_SPLICE TMPRSS2^ENSG00000184012.14 chr21:41508081:- ERG^ENSG00000157554.19 chr21:38584945:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1106:51716:27637,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1116:47817:27217,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1121:46992:21556,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1127:25132:18137,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1127:30723:26586,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1129:10716:27385,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1140:20270:17086,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1140:42744:17422,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1149:39007:7950,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1151:37510:19342,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1157:27648:27960,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1164:25699:19174,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1192:46935:28212,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1202:38101:24793,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1203:40859:19034,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1215:34298:18291,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1216:40868:28772,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1219:8920:13177,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1220:48060:28422,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1250:20715:26432,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1258:18151:21458,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1267:17568:10725,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1270:28360:7025,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1290:27293:12742,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1293:7634:2205,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1298:37923:4727,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1301:8443:19664,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1311:14454:10851,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1311:44160:7768,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1312:51150:27693,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1316:21168:1378,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1336:27050:24821,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1342:38343:9716,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1346:44112:5246,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1348:24348:21542,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1349:11290:17759,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1357:25909:7348,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1358:39055:18908,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1360:7375:27623,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1364:37421:18655,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1364:42510:5442,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1366:50600:19847,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1377:33109:14438,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1380:11638:9786,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1385:15611:9576,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1387:12674:24527,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1389:7270:11579,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1395:46409:19146,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1397:16905:25297,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1412:6509:27161,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1430:4098:3088,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1457:4001:26685,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1475:13580:25311,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1489:28919:20015,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1490:23336:11663,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2107:37882:20575,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2123:21322:18123,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2129:31629:23252,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2135:14591:17142,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2139:31054:10626,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2146:10546:3606,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2187:38910:19272,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2188:11582:27007,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2195:29088:27792,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2214:3548:25788,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2227:47987:15993,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2240:17633:15208,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2307:6242:11733,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2345:22163:25662,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2392:34040:23588,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2392:49451:24387,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2396:2788:21024,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2467:47477:16792,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2470:1566:3242,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1126:2456:12742,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1192:28255:28478,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1218:42502:25269,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1218:9462:7670,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1305:47768:29655,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1313:46919:15741,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1331:44484:2079,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1337:24307:25844,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1379:43521:1589,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1427:38562:19538,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2102:43796:16974,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2105:27430:20239,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2266:30472:4405,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2335:10732:27469,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2395:18960:22383,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1228:18062:18810,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1256:41838:28380,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1275:19688:6325,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1498:18782:2429,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2408:4034:4013,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2441:38271:22397,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1106:38845:25297,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2118:27325:15741,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2134:47267:25031 . YES_LDAS 1.0026 GT 1.6895 AG 1.9219 "[""ChimerKB"",""Larsson_TCGA"",""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""YOSHIHARA_TCGA"",""chimerdb_pubmed"",""DEEPEST2019"",""GUO2018CR_TCGA"",""ChimerPub"",""TumorFusionsNAR2018"",""Cosmic"",""INTRACHROMOSOMAL[chr21:2.80Mb]""]" chr21:41508081-chr21:38584945 False 1 PASS 98
LMNA--NTRK1 97 1 97.0 1.0 ONLY_REF_SPLICE LMNA^ENSG00000160789.23 chr1:156130773:+ NTRK1^ENSG00000198400.13 chr1:156874906:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1114:15392:18081,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1117:27252:16764,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1120:45293:29627,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1132:13321:12644,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1134:9721:6969,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1136:34064:16119,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1138:45908:7516,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1140:2302:24443,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1143:32422:3859,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1147:50940:23490,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1159:11331:28478,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1163:36014:23924,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1167:47089:3620,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1171:4527:6409,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1179:10813:14830,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1202:22827:6044,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1203:11703:26600,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1203:26637:8328,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1206:7043:17913,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1212:13879:28520,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1215:8402:2527,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1216:16929:3732,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1231:44152:6213,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1235:14162:25031,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1237:12836:8609,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1239:40665:22201,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1256:5927:11719,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1273:17568:20729,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1278:11153:2780,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1281:13604:11649,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1281:34476:9632,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1294:12528:5778,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1305:24154:16021,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1317:1445:14970,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1317:25221:2541,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1336:18636:13723,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1347:41046:19833,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1358:11242:9744,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1364:39767:24316,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1366:42477:29179,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1369:36968:3718,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1397:29525:28100,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1417:8726:17801,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1446:46328:27301,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1449:12375:18543,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1454:42761:25437,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1459:10821:27539,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1461:15012:19412,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1477:10627:16946,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1477:6695:26110,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1498:15586:24947,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2151:31386:4335,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2172:16759:14059,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2205:32664:29501,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2208:18078:3732,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2241:44476:5512,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2269:34258:24807,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2286:33109:10682,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2288:33036:8398,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2292:43214:27007,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2309:46644:8342,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2323:17940:20365,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2327:43521:12826,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2328:6962:20407,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2335:23401:29207,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2347:28158:28114,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2350:23636:10416,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2362:6178:18655,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2384:45091:29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&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2169:8807:10290 YES_LDAS 1.0025 GT 1.7465 AG 1.5058 "[""ChimerKB"",""ChimerPub"",""Cosmic"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr1:0.68Mb]""]" chr1:156130773-chr1:156874906 False 1 PASS 98
FGFR3--BAIAP2L1 94 0 94.0 0.0 ONLY_REF_SPLICE FGFR3^ENSG00000068078.20 chr4:1806934:+ BAIAP2L1^ENSG00000006453.14 chr7:98362432:- 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. YES_LDAS 0.9616 GT 1.8892 AG 1.8062 "[""ChimerKB"",""Klijn_CellLines"",""ChimerPub"",""Cosmic"",""CCLE_StarF2019"",""INTERCHROMOSOMAL[chr4--chr7]""]" chr4:1806934-chr7:98362432 False 1 PASS 94
TPM3--NTRK1 83 2 83.0 2.0 ONLY_REF_SPLICE TPM3^ENSG00000143549.21 chr1:154170400:- NTRK1^ENSG00000198400.13 chr1:156874571:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1105:5425:18782,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1117:14713:28170,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1131:49467:16568,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1141:9292:25479,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1147:26119:3172,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1149:2351:27021,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1155:52016:24765,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1160:39355:10206,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1181:38530:15783,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1183:2521:8006,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1187:2214:27932,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1188:20497:10893,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1191:15789:15853,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1191:31637:6311,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1192:35350:2429,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1205:40625:16666,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1212:42817:4769,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1218:29501:25395,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1226:33740:6143,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1233:25011:24989,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1256:42146:22327,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1261:18183:6437,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1275:50907:13065,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1276:28854:3844,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1285:47348:23378,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1296:4843:4433,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1310:22770:4405,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1310:24105:27091,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1324:7302:1855,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1329:10999:26530,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1355:5611:15489,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1368:38449:23041,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1388:18984:22145,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1392:9761:23798,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1393:34412:12322,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1397:44840:23209,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1419:3071:29557,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1426:1599:10781,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1493:19478:12042,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1496:41571:24246,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2140:24323:23798,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2167:43311:9772,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2175:31030:1925,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2176:23790:28758,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2182:11379:2051,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2222:23514:27189,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2249:16428:26825,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2272:4778:22004,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2286:18305:5890,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2295:25666:14270,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2296:40269:10360,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2322:38942:7362,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2343:29412:23560,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2345:27988:6661,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2419:2456:14396,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2444:18919:7712,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2478:44913:29445,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1105:16549:14396,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1135:5288:22635,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1170:50665:14326,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1183:24332:22803,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1190:43052:20113,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1322:6647:19496,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1445:37462:28758,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1459:17649:13779,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1470:9114:25339,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2112:8362:6044,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2113:1518:29557,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2433:15214:20407,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2478:33392:27623,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2488:48731:9940,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1151:39250:12995,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1208:23717:28660,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1313:27907:13807,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1492:15910:5610,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2285:9672:15517,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2355:17973:28912,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2498:22997:26152,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1148:30270:17843,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1169:19834:3214,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1394:25367:26783,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1409:18005:3746,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2190:11646:8847 &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1175:34533:25704,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1223:44160:21052 YES_LDAS 0.8696 GT 1.9329 AG 1.6895 "[""ChimerKB"",""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""HaasMedCancer"",""Klijn_CellLines"",""chimerdb_pubmed"",""DEEPEST2019"",""ChimerPub"",""TumorFusionsNAR2018"",""Cosmic"",""INTRACHROMOSOMAL[chr1:2.62Mb]""]" chr1:154170400-chr1:156874571 False 1 PASS 85
SLC34A2--ROS1 83 5 83.0 5.0 ONLY_REF_SPLICE SLC34A2^ENSG00000157765.13 chr4:25664330:+ ROS1^ENSG00000047936.11 chr6:117324415:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1106:8685:9435,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1107:14251:8651,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1116:48585:18964,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1133:18741:21472,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1135:30278:29683,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1137:36434:13891,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1144:37850:14634,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1145:1849:4601,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1178:29226:6451,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1178:48165:24036,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1179:27899:6647,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1191:28886:17492,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1195:14761:24443,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1227:9632:1631,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1233:3111:21668,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1235:42364:28730,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1262:23555:9323,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1264:9583:19959,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1269:43764:21346,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1273:10740:11958,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1280:1267:26965,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1281:13564:28590,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1292:7998:23266,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1296:38845:10360,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1301:39128:15251,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1308:42793:15881,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1337:12787:5806,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1341:32656:17100,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1353:41515:22887,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1356:14980:16329,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1359:5571:23602,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1413:33214:20729,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1429:41539:21724,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1451:12933:17492,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1459:45762:4657,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1470:48731:15265,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1471:39136:15545,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1477:29566:7207,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1482:20562:20253,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1486:41774:3326,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1493:38214:9884,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1498:51190:29557,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2105:31273:24429,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2116:23935:10122,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2156:51870:26783,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2196:42008:15979,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2198:40431:14816,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2208:51352:14872,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2214:13790:8861,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2215:26241:22691,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2222:26435:3354,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2298:3265:6717,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2301:27964:2051,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2313:16565:11817,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2402:26297:6843,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2418:31329:12112,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2435:6703:19762,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2436:35027:22943,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2468:14397:24513,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1110:28207:24919,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1110:3281:12770,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1114:10279:21584,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1116:17536:21010,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1155:28134:12378,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1223:26378:14970,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1235:51207:9856,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1305:47639:9197,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1341:12844:15068,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1368:27147:3718,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1481:19793:5694,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2318:39897:23504,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2486:38635:15825,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1176:48278:23195,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1222:2489:2653,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1344:12860:16862,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1369:4657:27511,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1370:24332:6016,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1464:45471:27721,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1470:31038:22649,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2473:50309:5610,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1367:20877:23518,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1491:5911:19875,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2158:21532:25269 &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1224:48521:9015,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1233:36936:19945,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1257:12399:23294,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1405:11849:2864,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2118:27924:19188 YES_LDAS 0.9003 GT 1.8892 AG 1.7465 "[""ChimerKB"",""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""Klijn_CellLines"",""GUO2018CR_TCGA"",""chimerdb_pubmed"",""ChimerPub"",""Cosmic"",""INTERCHROMOSOMAL[chr4--chr6]""]" chr4:25664330-chr6:117324415 False 1 PASS 88
CCDC6--RET 76 0 76.0 0.0 ONLY_REF_SPLICE CCDC6^ENSG00000108091.11 chr10:59906122:- RET^ENSG00000165731.20 chr10:43116584:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1102:26791:13695,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1103:27713:10725,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1116:11986:19945,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1116:17973:11930,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1117:38724:13961,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1119:22536:27091,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1120:7043:15979,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1122:40455:19370,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1137:45576:17619,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1141:25577:22635,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1143:47825:11033,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1164:39112:1518,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1169:6461:15671,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1177:28360:22579,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1185:10700:4545,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1188:1938:28464,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1204:26403:9127,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1217:32179:6016,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1242:10611:16049,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1251:25124:8118,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1276:45495:19216,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1283:47145:10893,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1284:21751:15727,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1289:24461:24933,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1317:17301:26853,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1319:25375:8441,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1321:13297:25269,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1324:32519:17114,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1326:47833:19342,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1327:14009:8062,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1342:13628:27581,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1365:36014:18824,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1368:11412:12532,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1373:21646:16301,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1387:47979:23742,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1392:31564:3466,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1426:23523:28772,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1432:8079:28842,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1433:26896:5946,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1463:7812:4643,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1481:37219:1350,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1484:39209:22957,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1494:21087:6675,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2123:44330:8595,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2124:26241:28548,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2129:36766:27133,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2152:20740:11341,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2164:17123:3985,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2171:4390:28702,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2208:2796:6465,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2263:34840:14774,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2296:42081:6857,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2370:18264:23784,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2370:19186:1925,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2386:41709:12434,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2396:4899:19664,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2474:47016:12602,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2477:29048:4741,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1130:24129:23882,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1131:40859:14718,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1147:18644:2976,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1296:42097:9688,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1378:5280:15419,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1385:31928:25199,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1439:28385:11803,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1442:44338:5750,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2107:39379:26727,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2122:28522:9267,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2146:50891:19062,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2234:43909:5624,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1329:20788:4419,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1434:13928:21850,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2271:27964:17100,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1437:15497:25662,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1469:28393:28604,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2189:23078:19959 . YES_LDAS 0.7775 GT 1.8892 AG 1.8323 "[""Mitelman"",""ChimerKB"",""Larsson_TCGA"",""ChimerSeq"",""TCGA_StarF2019"",""YOSHIHARA_TCGA"",""HaasMedCancer"",""DEEPEST2019"",""GUO2018CR_TCGA"",""ChimerPub"",""TumorFusionsNAR2018"",""Cosmic"",""INTRACHROMOSOMAL[chr10:16.66Mb]""]" chr10:59906122-chr10:43116584 False 1 PASS 76
IGH@-ext--GPR173 73 0 73.0 0.0 INCL_NON_REF_SPLICE IGH@-ext^IGH.g@-ext chr14:106537812:- GPR173^ENSG00000184194.6 chrX:53049052:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1105:42607:16764,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1118:25343:7320,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1223:14073:19076,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1244:8977:28072,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1251:25149:19454,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1397:11938:9716,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1426:9931:17591,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1474:11412:14690,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1485:28142:28058,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2102:29113:4265,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2105:12083:28380,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2181:50292:25564,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2201:4309:17857,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2204:43327:17619,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2209:38635:7810,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2211:43618:23448,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2233:11104:21724,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2262:38554:1252,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2328:28822:24471,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2345:51587:25536,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2363:47712:19496,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2368:25626:29725,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2455:12747:13891,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1126:7237:4125,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1135:31305:10220,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1138:38165:17563,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1159:9211:3704,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1175:33036:25073,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1186:51862:26124,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1197:2448:16568,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1214:30148:6199,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1228:9770:7418,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1304:2667:19104,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1336:40932:28464,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1386:7472:20982,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1432:25747:11215,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1482:5409:28730,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2105:29622:19748,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2231:44015:16428,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2264:18766:15180,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2286:14381:26278,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2294:28498:15026,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2294:8839:22425,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2415:38974:27763,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2422:4827:16091,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1143:1752:29655,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1172:20926:5190,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1179:8111:3088,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1181:40916:8679,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1332:11379:3480,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1333:8103:8595,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2101:9373:27553,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2113:5781:8973,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2218:44896:9996,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2326:11655:27469,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2334:5166:9169,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2355:13078:29599,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2382:8265:22439,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2419:41401:25325,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1169:5652:14270,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1181:38586:24064,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1191:30302:1757,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1223:13717:15012,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1233:48278:10781,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1319:42388:12798,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1370:24752:9071,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1429:28498:10094,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2211:21500:9996,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2247:45770:1589,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2254:18086:18067,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2319:22131:27371,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2361:51409:21556,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2403:17382:15531 . NO_LDAS 0.7468 GA 1.9329 GC 1.053 "[""INTERCHROMOSOMAL[chr14--chrX]""]" chr14:106537812-chrX:53049052 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 73
NCOA4--RET 69 1 69.0 1.0 ONLY_REF_SPLICE NCOA4^ENSG00000266412.6 chr10:46012883:- RET^ENSG00000165731.20 chr10:43116584:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1101:11905:26474,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1108:33077:29179,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1113:23523:20841,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1117:7068:6801,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1134:44832:20141,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1135:13669:6969,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1135:26395:24891,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1140:40301:17843,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1160:2197:20757,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1183:46361:12392,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1189:2869:8973,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1201:11703:25620,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1206:17415:22789,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1207:23539:23924,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1208:40398:4475,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1208:43432:3873,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1212:7148:13331,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1220:24396:4083,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1225:21007:26657,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1234:30245:8833,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1249:21298:1799,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1258:2731:7670,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1260:51805:5456,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1261:41846:4573,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1261:47558:14550,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1281:26451:5904,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1288:39015:24611,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1313:25100:27189,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1325:47178:11958,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1329:19567:11019,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1336:20068:28394,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1405:2432:6423,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1419:47720:7263,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1425:1040:8525,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1438:45843:15391,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1449:33902:7067,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1456:22503:7278,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1458:16581:29641,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1466:30844:2359,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1472:32470:21010,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1482:16953:22719,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1495:11121:16231,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2108:1777:5876,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2115:5352:17198,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2157:26718:6563,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2157:37243:7530,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2231:9389:3060,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2259:50786:13023,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2264:48035:1785,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2276:44468:11972,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2283:47606:19174,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2294:11339:26026,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2417:21581:6577,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2419:32260:2261,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1105:35051:6311,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1117:6396:28086,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1206:34015:4825,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1221:32341:29109,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1253:14777:28366,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1280:48545:14662,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1286:21087:18501,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1309:48723:1266,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1378:1477:5806,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2109:46911:26516,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2480:33320:10823,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1128:50584:14354,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1204:38206:27105,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1259:1607:14690,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2491:46579:3943 &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1379:43586:21430 YES_LDAS 0.7161 GT 1.9086 AG 1.8323 "[""ChimerKB"",""ChimerSeq"",""TCGA_StarF2019"",""YOSHIHARA_TCGA"",""HaasMedCancer"",""chimerdb_pubmed"",""DEEPEST2019"",""GUO2018CR_TCGA"",""ChimerPub"",""TumorFusionsNAR2018"",""Cosmic"",""INTRACHROMOSOMAL[chr10:2.87Mb]""]" chr10:46012883-chr10:43116584 False 1 PASS 70
CD74--ROS1 66 2 66.0 2.0 ONLY_REF_SPLICE CD74^ENSG00000019582.16 chr5:150404680:- ROS1^ENSG00000047936.11 chr6:117324415:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1111:27511:27525,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1144:47251:3760,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1150:34873:16596,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1169:15101:18361,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1173:19502:23041,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1174:40317:26222,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1185:38457:26474,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1197:13693:19118,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1221:10886:3718,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1266:39047:9562,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1313:49022:2681,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1329:48424:20113,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1367:18288:20379,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1376:22989:13275,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1381:15554:14634,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1411:34428:25690,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1427:6679:28772,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1460:33109:24807,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2114:8419:23322,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2197:40067:8356,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2280:44678:20996,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2280:46482:7193,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2316:27883:9337,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2339:18790:19006,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2363:37729:16049,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2381:8200:5036,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2416:23110:10066,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2462:35868:7306,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2479:33724:5582,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2492:24720:11874,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1122:14219:6465,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1132:36936:17871,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1133:13459:22131,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1141:42801:27245,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1161:19453:16932,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1276:47825:23167,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1304:25610:20337,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1308:20707:22074,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1331:31426:22845,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1348:25869:20225,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1367:50899:14340,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1411:8402:3873,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1437:45722:28240,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2111:1874:25522,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2301:50875:28058,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2436:9414:2962,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2474:31782:13625,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1139:15093:28464,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1348:41571:17633,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1354:8912:19776,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1377:10473:16960,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1466:18474:13107,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2134:14082:5890,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1133:48674:22453,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1147:36200:21472,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1234:32794:14956,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1238:48205:25143,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1285:42963:26909,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1444:51174:28492,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1465:38327:11565,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2146:29744:12364,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2162:14009:21262,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2190:19300:28716,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2205:50964:1364,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2217:43036:28941,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2486:19923:28002 &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1328:14802:10949,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1110:33311:24877 YES_LDAS 0.6957 GT 1.7819 AG 1.7465 "[""ChimerKB"",""ChimerSeq"",""TCGA_StarF2019"",""Klijn_CellLines"",""chimerdb_pubmed"",""DEEPEST2019"",""GUO2018CR_TCGA"",""ChimerPub"",""TumorFusionsNAR2018"",""Cosmic"",""INTERCHROMOSOMAL[chr5--chr6]""]" chr5:150404680-chr6:117324415 False 1 PASS 68
IGH-@-ext--HSD11B1L 65 0 65.0 0.0 INCL_NON_REF_SPLICE IGH-@-ext^IGH-.g@-ext chr14:105864635:+ HSD11B1L^ENSG00000167733.14 chr19:5688337:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1108:6129:9015,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1164:50567:13541,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1165:16136:8637,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1198:26953:21262,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1210:8952:3901,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1224:46539:21220,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1225:3831:15349,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1284:6614:29417,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1373:37001:23167,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1395:15934:14564,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1398:2480:6143,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1410:43812:14200,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1432:25941:5694,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2111:6404:10584,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2263:1841:3046,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2302:12779:19188,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2312:43561:13765,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2322:22471:10220,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2327:10991:3396,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2330:44993:3690,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2342:51344:19594,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2454:22859:22551,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2479:12512:7095,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2479:2408:29669,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1105:34379:15068,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1118:48221:22453,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1127:49548:15251,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1161:23838:15839,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1166:4503:5694,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1281:21646:16554,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1282:6072:16596,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1307:3929:6605,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1345:10659:14368,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1409:17382:11944,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1442:26071:24975,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1455:33813:5932,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1493:25383:24765,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2109:8863:12182,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2263:28417:3564,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2363:48780:1757,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2392:42453:17647,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2402:24704:1476,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2469:45900:20225,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1144:35455:22929,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1233:42162:17787,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1263:4875:18137,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1298:6307:28408,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1398:45786:19720,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1406:1324:13583,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1409:51449:27988,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1456:49977:15012,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1461:2998:22705,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2195:17269:28702,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2375:28409:4167,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2401:26589:28702,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2449:6639:7684,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1166:8677:14802,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1176:27746:2373,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1195:23296:7137,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1282:35431:7053,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1301:22058:21332,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1401:12334:27105,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1424:50147:23462,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2142:45519:27637,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2227:14818:17086 . NO_LDAS 0.665 AC 1.8295 TG 1.5301 "[""INTERCHROMOSOMAL[chr14--chr19]""]" chr14:105864635-chr19:5688337 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 65
KIF5B--RET 57 2 57.0 2.0 ONLY_REF_SPLICE KIF5B^ENSG00000170759.11 chr10:32017143:- RET^ENSG00000165731.20 chr10:43114480:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1102:25157:14059,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1110:37656:27413,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1115:32373:29473,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1123:33198:20982,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1125:50592:5680,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1130:31839:24625,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1135:13758:8693,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1144:33384:9477,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1147:5967:7894,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1183:42841:15881,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1184:47906:15685,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1189:12164:1364,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1203:29631:29655,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1212:40091:24681,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1213:44880:10024,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1214:47477:4097,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1215:3848:1336,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1225:36564:19020,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1236:34193:20183,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1243:47380:2864,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1271:30043:6801,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1284:38165:26839,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1295:41321:26110,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1304:1453:18095,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1311:28765:11481,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1314:23272:2135,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1318:10336:14144,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1335:21589:17268,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1343:15125:19552,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1353:18952:13429,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1391:47938:19272,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1421:38246:8090,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1474:38400:18529,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2148:45697:5638,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2220:29857:20407,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2227:12779:9688,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2246:44354:23378,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2310:15044:9295,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2361:4438:22201,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2385:39832:9407,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2411:4317:29445,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1104:10093:9239,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1116:12747:1560,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1157:10417:23812,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1166:37348:29291,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1240:26500:4811,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1313:3476:19861,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1330:43715:25606,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1370:9122:5120,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1377:33344:4307,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1441:47833:19594,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1445:26467:28016,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2182:39225:9926,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1211:15764:4349,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1216:16517:2962,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1334:4616:4545,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2447:18701:12126 &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2448:30084:20351,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2353:33676:25423 YES_LDAS 0.6036 GT 1.9656 AG 1.9656 "[""ChimerKB"",""ChimerPub"",""Cosmic"",""ChimerSeq"",""INTRACHROMOSOMAL[chr10:11.02Mb]""]" chr10:32017143-chr10:43114480 False 1 PASS 59
SLC45A3--BRAF 50 0 50.0 0.0 ONLY_REF_SPLICE SLC45A3^ENSG00000158715.6 chr1:205680394:- BRAF^ENSG00000157764.14 chr7:140794467:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1114:11752:28170,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1161:13167:13779,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1178:7343:25353,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1209:28393:12546,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1210:39250:12042,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1212:15611:8987,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1237:31629:7081,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1245:20732:25087,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1248:51554:20519,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1253:12771:13737,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1269:23870:16960,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1340:23523:3494,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1366:10352:20897,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1403:34954:17408,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1498:41709:11677,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2106:51522:15503,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2109:11444:11860,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2135:18838:14774,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2135:49411:27679,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2135:51077:6465,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2152:50357:26320,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2164:21047:25353,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2209:3993:24148,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2233:51012:26755,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2252:48901:2695,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2256:33878:6521,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2259:51352:6325,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2283:4907:29095,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2470:7731:24569,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1187:47259:2401,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1248:26945:17801,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1347:39258:19034,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1410:25375:28366,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1420:6331:6255,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1433:26063:29221,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1440:29744:26432,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1467:8241:13849,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2193:24016:13037,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2233:27924:8202,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1218:25181:13149,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1263:22689:23714,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1270:10215:24162,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1287:36887:3718,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1358:34525:1336,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1417:36078:23364,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2276:16468:14087,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2324:13175:17044,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2463:10659:27259,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2204:31232:27329,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2268:8451:16315 . YES_LDAS 0.5115 GT 1.5628 AG 1.7465 "[""ChimerKB"",""ChimerPub"",""Cosmic"",""ChimerSeq"",""INTERCHROMOSOMAL[chr1--chr7]""]" chr1:205680394-chr7:140794467 False 1 PASS 50
ETV6--NTRK3 50 0 50.0 0.0 ONLY_REF_SPLICE ETV6^ENSG00000139083.11 chr12:11869969:+ NTRK3^ENSG00000140538.16 chr15:87940753:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1101:42275:21122,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1102:1833:22425,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1109:13637:10304,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1127:26030:19608,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1162:45948:3915,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1166:22697:11761,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1180:41952:9491,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1181:4212:28198,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1194:26144:8006,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1230:2707:6983,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1233:38085:28296,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1237:22147:13527,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1239:31435:10640,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1243:5789:6885,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1244:30278:27721,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1245:12860:20309,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1257:32098:1869,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1262:32680:6997,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1273:22269:4741,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1278:22422:7137,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1304:2448:2247,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1308:51538:29655,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1324:37445:9786,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1334:50818:18487,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1365:33222:8553,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1372:7035:12938,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1381:46620:3564,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1396:50616:2499,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1461:6250:20855,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1465:26063:6941,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1473:18240:15194,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1495:30456:19006,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1498:5361:1575,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2137:41183:20519,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2141:33587:29473,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2161:31459:29067,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2219:40269:7950,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2305:32413:18417,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2318:51271:5736,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2370:27066:9295,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1196:32721:25704,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1217:23943:4167,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1372:4681:19286,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1374:37826:10640,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1380:46870:10697,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1263:29986:6731,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1495:26395:11747,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2154:4697:22229,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2202:6388:12826,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1344:27543:26797 . YES_LDAS 0.5115 GT 1.7819 AG 1.9656 "[""ChimerKB"",""Larsson_TCGA"",""ChimerSeq"",""TCGA_StarF2019"",""YOSHIHARA_TCGA"",""HaasMedCancer"",""chimerdb_pubmed"",""chimerdb_omim"",""DEEPEST2019"",""GUO2018CR_TCGA"",""ChimerPub"",""TumorFusionsNAR2018"",""Cosmic"",""INTERCHROMOSOMAL[chr12--chr15]""]" chr12:11869969-chr15:87940753 False 1 PASS 50
TFG--NTRK1 34 3 34.0 3.0 ONLY_REF_SPLICE TFG^ENSG00000114354.15 chr3:100732672:+ NTRK1^ENSG00000198400.13 chr1:156874571:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1124:25828:24611,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1140:28425:17955,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1155:24874:5498,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1158:44540:2569,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1174:48173:25872,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1186:17601:6745,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1285:51692:2345,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1332:39387:13485,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1378:50851:28184,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1385:4479:28520,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1464:38028:3340,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1475:43950:26068,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2110:20869:18319,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2132:45107:5316,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2137:46943:3340,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2153:10158:20225,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2174:14308:14494,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2297:13313:7978,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2297:20594:3859,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2382:36750:3228,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2384:28190:20351,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2387:24065:28478,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2435:17051:20113,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2471:1574:7796,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1123:50786:1252,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1346:4721:3634,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2267:28563:11187,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1210:5797:19875,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1301:28239:8609,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1336:20796:23434,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1351:36717:11888,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1491:43845:9688,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2154:34574:21150,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2160:36636:19398 &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1428:13774:16540,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2186:26071:18810,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1374:23345:21150 YES_LDAS 0.3785 GT 1.9329 AG 1.6895 "[""ChimerKB"",""ChimerSeq"",""TCGA_StarF2019"",""HaasMedCancer"",""DEEPEST2019"",""chimerdb_pubmed"",""TumorFusionsNAR2018"",""Cosmic"",""INTERCHROMOSOMAL[chr3--chr1]""]" chr3:100732672-chr1:156874571 False 1 PASS 37
PAX8--PPARG 33 0 33.0 0.0 ONLY_REF_SPLICE PAX8^ENSG00000125618.18 chr2:113235394:- PPARG^ENSG00000132170.23 chr3:12379704:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1121:5021:14942,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1131:50535:18333,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1142:9972:10935,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1171:23304:7179,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1190:26920:25634,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1307:40997:7642,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1313:28093:9001,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1449:41183:27974,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1460:2424:14480,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1476:48561:7404,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2104:14866:24625,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2140:31718:23602,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2177:31192:26362,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2210:2125:21024,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2265:13952:11439,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2304:25230:22004,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2418:34962:16217,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1195:46830:23125,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1252:21225:6521,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1379:19178:23153,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1459:35188:13555,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2120:32430:28310,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2192:13685:19076,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1146:23749:24148,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1179:42534:21374,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1244:10287:3410,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2320:29161:27273,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2374:45188:23616,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1178:31418:25017,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1178:50398:12966,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1248:29995:17198,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2206:47809:8959,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2249:26839:25269 . YES_LDAS 0.3376 GT 1.8295 AG 1.9329 "[""Mitelman"",""ChimerKB"",""ChimerSeq"",""TCGA_StarF2019"",""YOSHIHARA_TCGA"",""HaasMedCancer"",""chimerdb_pubmed"",""chimerdb_omim"",""DEEPEST2019"",""GUO2018CR_TCGA"",""ChimerPub"",""TumorFusionsNAR2018"",""Cosmic"",""INTERCHROMOSOMAL[chr2--chr3]""]" chr2:113235394-chr3:12379704 False 1 PASS 33
EGFR--SEPTIN14 28 0 28.0 0.0 ONLY_REF_SPLICE EGFR^ENSG00000146648.19 chr7:55200413:+ SEPTIN14^ENSG00000154997.9 chr7:55796092:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1121:39088:6409,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1179:16112:15405,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1183:9341:4321,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1197:14535:18305,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1243:52153:14298,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1255:30084:16764,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1258:43683:6969,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1259:42558:8917,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1298:13111:13849,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1307:10077:29193,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1310:28279:15068,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1419:7618:3550,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1429:35941:18641,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1455:38222:13037,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2128:28142:22145,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2138:48294:9015,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2170:49184:15180,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2258:23361:5260,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2264:4438:20155,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2266:43796:28016,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2378:3540:10781,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1407:17358:8679,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1469:46959:9197,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2264:8160:26488,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2428:1364:27637,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1236:26694:7726,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2245:25351:16946,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2461:48165:11593 . YES_LDAS 0.2864 GT 1.8892 AG 1.9899 "[""INTRACHROMOSOMAL[chr7:0.58Mb]""]" chr7:55200413-chr7:55796092 False 1 PASS 28
MRPS18A--AC061975.8 20 0 17.5 0.0 INCL_NON_REF_SPLICE MRPS18A^ENSG00000096080.12 chr6:43687668:- AC061975.8^ENSG00000287721.1 chr17:28223196:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1385:26540:16119,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2237:34703:14900,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2385:6809:19664,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2444:18062:21192,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1371:47639:26825,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2106:36491:3424,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1103:16298:25816,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1462:3920:5442,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1489:15594:29137,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2182:26856:23560,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2461:48027:20939,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2470:10085:1631,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2498:44573:21542,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1174:23296:5876,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1275:26856:10080,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1322:11145:6213,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1347:48893:23308,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1398:24097:15447,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2117:50543:20645,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2345:1283:7824 . YES_LDAS 0.179 GT 1.7232 AG 1.7819 "[""INTERCHROMOSOMAL[chr6--chr17]""]" chr6:43687668-chr17:28223196 True pair|recurrent breakpoints 0 Blacklisted FAIL 20
EML4--ALK 18 0 18.0 0.0 ONLY_REF_SPLICE EML4^ENSG00000143924.19 chr2:42295516:+ ALK^ENSG00000171094.18 chr2:29223528:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1127:4964:12182,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1128:47979:6227,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1178:24518:14270,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1215:37227:28408,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1311:27891:18123,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1345:42744:8763,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1374:19211:10963,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1443:42550:8651,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1456:19283:14480,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1489:43100:17030,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2201:27204:15166,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2235:41167:5638,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2487:31977:22873,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1201:51207:16694,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2109:51546:14592,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2184:20384:11761,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1106:34638:9463,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1481:6898:19959 . YES_LDAS 0.1841 GT 1.6895 AG 1.9086 "[""ChimerKB"",""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""YOSHIHARA_TCGA"",""HaasMedCancer"",""Klijn_CellLines"",""chimerdb_pubmed"",""DEEPEST2019"",""GUO2018CR_TCGA"",""ChimerPub"",""TumorFusionsNAR2018"",""Cosmic"",""INTRACHROMOSOMAL[chr2:12.25Mb]""]" chr2:42295516-chr2:29223528 False 1 PASS 18
MRPS18A--PDC-AS1 16 0 3.5 0.0 INCL_NON_REF_SPLICE MRPS18A^ENSG00000096080.12 chr6:43687668:- PDC-AS1^ENSG00000229739.4 chr1:186459293:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1385:26540:16119,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2385:6809:19664,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2444:18062:21192,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1371:47639:26825,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2106:36491:3424,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1103:16298:25816,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1462:3920:5442,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1489:15594:29137,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2461:48027:20939,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2470:10085:1631,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2498:44573:21542,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1275:26856:10080,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1347:48893:23308,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1398:24097:15447,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2117:50543:20645,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2304:30326:24499 . YES_LDAS 0.0358 GT 1.7232 AG 1.7819 "[""INTERCHROMOSOMAL[chr6--chr1]""]" chr6:43687668-chr1:186459293 True pair|recurrent breakpoints 0 Blacklisted FAIL 16
RPL17--RPL17P12 11 0 11.0 0.0 INCL_NON_REF_SPLICE RPL17^ENSG00000265681.7 chr18:49491405:- RPL17P12^ENSG00000230559.1 chr2:146194373:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1146:41952:15152,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1325:33020:23280,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1332:37866:12168,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1437:13531:15783,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2376:32567:21346,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1442:51943:3873,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1458:21743:20645,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2185:46838:8314,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2292:41693:23055,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1474:37284:17380,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2452:9430:22691 . NO_LDAS 0.1125 GT 1.9219 AG 1.8892 "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTERCHROMOSOMAL[chr18--chr2]""]" chr18:49491405-chr2:146194373 True pair|recurrent breakpoints 0 Blacklisted FAIL 11
AGAP5--AC022400.4 10 0 10.0 0.0 INCL_NON_REF_SPLICE AGAP5^ENSG00000172650.14 chr10:73692043:- AC022400.4^ENSG00000272140.2 chr10:73713332:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1132:27608:3284,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1148:34015:2051,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1241:5822:20421,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2259:17091:26965,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2335:4592:19524,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1484:7674:21108,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1490:20715:29011,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1347:32389:27287,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1429:15441:26909,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1440:11104:25648 . YES_LDAS 0.1023 GT 1.7465 AG 1.9086 "[""INTRACHROMOSOMAL[chr10:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[5854]""]" chr10:73692043-chr10:73713332 True pair|recurrent breakpoints 0 Blacklisted FAIL 10
CHST11--MME 9 0 9.0 0.0 INCL_NON_REF_SPLICE CHST11^ENSG00000171310.11 chr12:104601991:+ MME^ENSG00000196549.13 chr3:155183570:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1168:35180:12896,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1186:35285:5932,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1202:42720:5806,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1281:16217:10402,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1455:6170:28310,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2209:10813:7656,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2366:29889:10458,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2185:14575:22159,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2488:21241:21962 . NO_LDAS 0.0921 GT 1.7056 AG 1.9656 "[""INTERCHROMOSOMAL[chr12--chr3]""]" chr12:104601991-chr3:155183570 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 9
LILRB1--LILRA5 8 0 8.0 0.0 ONLY_REF_SPLICE LILRB1^ENSG00000104972.15 chr19:54631107:+ LILRA5^ENSG00000187116.14 chr19:54312370:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1106:19720:20645,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1116:19809:28730,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1141:2853:9730,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2109:38149:29137,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2260:3831:9099,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2323:5943:25255,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2350:39411:14256,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2181:14389:18333 . YES_LDAS 0.0818 GT 1.7819 AG 1.7465 "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:0.30Mb]""]" chr19:54631107-chr19:54312370 True pair|recurrent breakpoints 0 Blacklisted FAIL 8
BPTF--DCXR 8 0 8.0 0.0 INCL_NON_REF_SPLICE BPTF^ENSG00000171634.18 chr17:67945620:+ DCXR^ENSG00000169738.8 chr17:82037080:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1304:39605:3214,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2307:7763:2738,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1316:12302:14214,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2149:19534:4741,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2223:22568:3270,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2492:37729:13835,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1172:13232:3382,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1391:49524:23672 . NO_LDAS 0.0818 GT 1.5628 AG 1.6049 "[""INTRACHROMOSOMAL[chr17:14.05Mb]""]" chr17:67945620-chr17:82037080 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 8
LEPROT--LEPR 7 0 7.0 0.0 ONLY_REF_SPLICE LEPROT^ENSG00000213625.9 chr1:65425378:+ LEPR^ENSG00000116678.20 chr1:65565546:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1365:30812:12756,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2146:38764:23308,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2387:36483:16862,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1469:15813:10570,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2206:17002:22775,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1407:30440:27357,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2448:2052:24204 . YES_LDAS 0.0716 GT 1.8256 AG 1.9219 "[""GTEx_recurrent_StarF2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr1:0.09Mb]"",""NEIGHBORS[89682]""]" chr1:65425378-chr1:65565546 True pair|recurrent breakpoints 0 Blacklisted FAIL 7
GNS--HLA-A 7 0 3.5 0.0 INCL_NON_REF_SPLICE GNS^ENSG00000135677.11 chr12:64715124:- HLA-A^ENSG00000206503.13 chr6:29890264:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2124:33740:13037,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1365:16864:28730,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1405:38303:5274,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1386:19130:17717,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1103:33578:15699,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1242:1518:11481,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2490:41919:10612 . NO_LDAS 0.0358 GT 1.6402 AG 1.2729 "[""INTERCHROMOSOMAL[chr12--chr6]""]" chr12:64715124-chr6:29890264 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 7
AC026191.1--SRGAP3 7 0 7.0 0.0 ONLY_REF_SPLICE AC026191.1^ENSG00000254485.5 chr3:9326010:- SRGAP3^ENSG00000196220.16 chr3:9124917:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1205:3055:3410,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2198:10287:1112,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1138:51870:17058,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1209:30407:13989,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2311:18337:20883,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2272:44985:17717,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2384:41070:29011 . YES_LDAS 0.0716 GT 1.9656 AG 1.8062 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.04Mb]"",""NEIGHBORS[42903]""]" chr3:9326010-chr3:9124917 True pair|recurrent breakpoints 0 Blacklisted FAIL 7
VTI1A--AL158212.1 5 0 5.0 0.0 ONLY_REF_SPLICE VTI1A^ENSG00000151532.14 chr10:112668998:+ AL158212.1^ENSG00000225292.2 chr10:112888735:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1166:43780:12518,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1259:27632:22046,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2231:34193:2107,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1474:49386:23153,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1481:10813:4545 . YES_LDAS 0.0512 GT 1.7465 AG 1.8892 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr10:0.07Mb]"",""NEIGHBORS[69991]""]" chr10:112668998-chr10:112888735 True pair|recurrent breakpoints 0 Blacklisted FAIL 5
HLA-B--ZFYVE28 5 0 5.0 0.0 INCL_NON_REF_SPLICE HLA-B^ENSG00000234745.13 chr6:31354629:- ZFYVE28^ENSG00000159733.14 chr4:2304531:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2103:26548:5680,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2232:1445:17100,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1466:45188:16582,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1237:29897:23336,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1394:37324:3887 . NO_LDAS 0.0512 GT 1.9656 AG 1.7819 "[""INTERCHROMOSOMAL[chr6--chr4]""]" chr6:31354629-chr4:2304531 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 5
SULF2--MCAM 4 0 4.0 0.0 INCL_NON_REF_SPLICE SULF2^ENSG00000196562.14 chr20:47785365:- MCAM^ENSG00000076706.17 chr11:119318329:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2292:34031:6619,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2191:2667:13471,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2365:2141:23966,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2483:13475:27455 . NO_LDAS 0.0409 GT 1.7056 AG 1.3996 "[""INTERCHROMOSOMAL[chr20--chr11]""]" chr20:47785365-chr11:119318329 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 4
PIH1D1--WASF3 4 0 4.0 0.0 INCL_NON_REF_SPLICE PIH1D1^ENSG00000104872.11 chr19:49447338:- WASF3^ENSG00000132970.14 chr13:26687521:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2272:16144:9295,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1433:51239:17647,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2464:24930:17254,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1131:39290:9113 . NO_LDAS 0.0409 GT 1.7968 AG 1.8323 "[""INTERCHROMOSOMAL[chr19--chr13]""]" chr19:49447338-chr13:26687521 True pair|recurrent breakpoints 0 Blacklisted FAIL 4
MFHAS1--AL512306.1 4 0 4.0 0.0 INCL_NON_REF_SPLICE MFHAS1^ENSG00000147324.11 chr8:8892744:- AL512306.1^ENSG00000236779.1 chr1:204529646:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1370:48877:2009,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2396:30351:6633,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2425:32761:14564,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2468:34436:24751 . NO_LDAS 0.0409 GT 1.2729 AG 1.6729 "[""INTERCHROMOSOMAL[chr8--chr1]""]" chr8:8892744-chr1:204529646 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 4
CTDNEP1--NAB2 4 0 2.0 0.0 INCL_NON_REF_SPLICE CTDNEP1^ENSG00000175826.12 chr17:7244031:- NAB2^ENSG00000166886.13 chr12:57093174:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2384:24178:25143,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2353:15667:28926,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1150:49394:13863,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1156:16921:16722 . NO_LDAS 0.0205 GT 1.9329 AG 1.9329 "[""INTERCHROMOSOMAL[chr17--chr12]""]" chr17:7244031-chr12:57093174 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 4
CTDNEP1--IBTK 4 0 2.0 0.0 INCL_NON_REF_SPLICE CTDNEP1^ENSG00000175826.12 chr17:7244031:- IBTK^ENSG00000005700.15 chr6:82240236:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2384:24178:25143,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2353:15667:28926,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1150:49394:13863,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1156:16921:16722 . NO_LDAS 0.0205 GT 1.9329 AG 1.8892 "[""INTERCHROMOSOMAL[chr17--chr6]""]" chr17:7244031-chr6:82240236 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 4
CHCHD10--AC005064.1 4 0 3.23 0.0 INCL_NON_REF_SPLICE CHCHD10^ENSG00000250479.9 chr22:23767834:- AC005064.1^ENSG00000234715.2 chr7:103446122:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1337:39800:21878,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2308:43990:15180,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1248:29631:27665,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2348:40067:4377 . NO_LDAS 0.033 GT 1.6402 AG 1.1589 "[""INTERCHROMOSOMAL[chr22--chr7]""]" chr22:23767834-chr7:103446122 True pair|recurrent breakpoints 0 Blacklisted FAIL 4
AL139002.1--TMEM200A 4 0 4.0 0.0 ONLY_REF_SPLICE AL139002.1^ENSG00000233379.2 chr13:77975347:- TMEM200A^ENSG00000164484.12 chr6:130440407:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2429:25327:4013,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1415:3540:25886,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2265:49564:14354,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1238:24259:26460 . YES_LDAS 0.0409 GT 1.9656 AG 1.7465 "[""INTERCHROMOSOMAL[chr13--chr6]""]" chr13:77975347-chr6:130440407 True pair|recurrent breakpoints 0 Blacklisted FAIL 4
AC008740.1--CRYM-AS1 4 0 3.75 0.0 INCL_NON_REF_SPLICE AC008740.1^ENSG00000257403.2 chr16:21352138:+ CRYM-AS1^ENSG00000189149.12 chr16:21338921:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2239:42421:11846,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2322:46013:27343,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1261:27373:6941,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1363:43214:26530 . YES_LDAS 0.0384 GT 1.7232 AG 1.9656 "[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8102]""]" chr16:21352138-chr16:21338921 True pair|recurrent breakpoints 0 Blacklisted FAIL 4
SLC7A5--SMG1P1 4 1 2.0 0.33 ONLY_REF_SPLICE SLC7A5^ENSG00000103257.9 chr16:87868885:- SMG1P1^ENSG00000237296.9 chr16:22454702:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1217:35140:4335,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1412:25505:20015,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1468:10328:23742,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1226:29509:24541 &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2348:22398:8525 YES_LDAS 0.0239 GT 1.5301 AG 1.9656 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:65.34Mb]""]" chr16:87868885-chr16:22454702 True pair|recurrent breakpoints 0 Blacklisted FAIL 5
VTI1A--AL158212.1 3 0 3.0 0.0 INCL_NON_REF_SPLICE VTI1A^ENSG00000151532.14 chr10:112669009:+ AL158212.1^ENSG00000225292.2 chr10:112888735:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2338:13264:26446,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1258:29954:26124,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1183:12261:16946 . YES_LDAS 0.0307 GT 1.5628 AG 1.8892 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr10:0.07Mb]"",""NEIGHBORS[69991]""]" chr10:112669009-chr10:112888735 True pair|recurrent breakpoints 0 Blacklisted FAIL 3
TMED3--MINAR1 3 0 3.0 0.0 ONLY_REF_SPLICE TMED3^ENSG00000166557.14 chr15:79314005:+ MINAR1^ENSG00000169330.9 chr15:79456098:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1114:16436:29137,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1203:43270:3592,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1193:6000:23812 . YES_LDAS 0.0307 GT 1.7968 AG 1.9656 "[""INTRACHROMOSOMAL[chr15:0.00Mb]"",""NEIGHBORS[4904]""]" chr15:79314005-chr15:79456098 True pair|recurrent breakpoints 0 Blacklisted FAIL 3
SPCS2--HIPK1 3 0 3.0 0.0 ONLY_REF_SPLICE SPCS2^ENSG00000118363.12 chr11:74949399:+ HIPK1^ENSG00000163349.22 chr1:113973024:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1144:35860:8384,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1349:4382:23840,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2474:44314:6521 . YES_LDAS 0.0307 GT 1.7819 AG 1.9086 "[""INTERCHROMOSOMAL[chr11--chr1]""]" chr11:74949399-chr1:113973024 False 0 Read count too low: 3 < 5 FAIL 3
SEPTIN14--AP006222.1 3 0 3.0 0.0 INCL_NON_REF_SPLICE SEPTIN14^ENSG00000154997.9 chr7:55795924:- AP006222.1^ENSG00000228463.10 chr1:289370:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1126:16840:1420,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1493:21605:10010,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2287:21638:23854 . YES_LDAS 0.0307 GT 1.5546 AG 1.7968 "[""INTERCHROMOSOMAL[chr7--chr1]""]" chr7:55795924-chr1:289370 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 3
MAZ--SMARCA5 3 0 1.0 0.0 INCL_NON_REF_SPLICE MAZ^ENSG00000103495.14 chr16:29807214:+ SMARCA5^ENSG00000153147.6 chr4:143513943:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1109:23458:1336,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1466:23231:21934,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1223:22196:10725 . NO_LDAS 0.0102 GC 1.6895 AG 1.2366 "[""INTERCHROMOSOMAL[chr16--chr4]""]" chr16:29807214-chr4:143513943 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 3
JUND--CCDC13 3 0 3.0 0.0 INCL_NON_REF_SPLICE JUND^ENSG00000130522.6 chr19:18280504:- CCDC13^ENSG00000244607.7 chr3:42739711:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2167:16840:12826,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1277:26848:4125,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1256:35374:18950 . NO_LDAS 0.0307 GT 1.7465 AG 1.8892 "[""INTERCHROMOSOMAL[chr19--chr3]""]" chr19:18280504-chr3:42739711 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 3
GALNT15--ZDHHC7 3 0 3.0 0.0 INCL_NON_REF_SPLICE GALNT15^ENSG00000131386.19 chr3:16219970:+ ZDHHC7^ENSG00000153786.13 chr16:84981943:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1125:40681:3788,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1107:13920:8525,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2210:22560:21668 . NO_LDAS 0.0307 GT 1.8892 AG 1.8062 "[""INTERCHROMOSOMAL[chr3--chr16]""]" chr3:16219970-chr16:84981943 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 3
DTX2--DTX1 3 0 3.0 0.0 ONLY_REF_SPLICE DTX2^ENSG00000091073.19 chr7:76503587:+ DTX1^ENSG00000135144.7 chr12:113095325:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1429:19898:6297,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2127:12892:4559,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2492:39848:26390 . NO_LDAS 0.0307 GT 1.9219 AG 1.6402 "[""INTERCHROMOSOMAL[chr7--chr12]""]" chr7:76503587-chr12:113095325 False 0 Read count too low: 3 < 5 FAIL 3
AC104123.1--CAST 3 0 3.0 0.0 ONLY_REF_SPLICE AC104123.1^ENSG00000251314.2 chr5:96379652:+ CAST^ENSG00000153113.24 chr5:96675539:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2132:31871:21794,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2167:41887:28884,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1322:44443:16778 . YES_LDAS 0.0307 GT 1.7819 AG 1.8295 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.11Mb]""]" chr5:96379652-chr5:96675539 True pair|recurrent breakpoints 0 Blacklisted FAIL 3
AC009533.1--MIR4307HG 3 0 3.0 0.0 INCL_NON_REF_SPLICE AC009533.1^ENSG00000111788.10 chr12:9310083:+ MIR4307HG^ENSG00000257612.2 chr14:26881418:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1278:3670:28941,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2302:49775:22481,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2329:11501:2709 . NO_LDAS 0.0307 GT 1.5656 AG 1.8323 "[""INTERCHROMOSOMAL[chr12--chr14]""]" chr12:9310083-chr14:26881418 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 3
SAMD5--SASH1 3 1 3.0 1.0 ONLY_REF_SPLICE SAMD5^ENSG00000203727.4 chr6:147509387:+ SASH1^ENSG00000111961.18 chr6:148390134:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1223:31524:9618,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1236:1275:26951,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2273:16128:18599 &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1355:33603:2289 YES_LDAS 0.0409 GT 1.8295 AG 1.9219 "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr6:0.70Mb]""]" chr6:147509387-chr6:148390134 True pair|recurrent breakpoints 0 Blacklisted FAIL 4
ZNF827--SMARCC1 2 0 2.0 0.0 ONLY_REF_SPLICE ZNF827^ENSG00000151612.18 chr4:145870245:- SMARCC1^ENSG00000173473.11 chr3:47622341:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1133:51571:8917,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2457:32834:23938 . NO_LDAS 0.0205 GT 1.9329 AG 1.9086 "[""INTERCHROMOSOMAL[chr4--chr3]""]" chr4:145870245-chr3:47622341 False 0 Read count too low: 2 < 5 FAIL 2
ZNF433-AS1--EIF4G3 2 0 2.0 0.0 ONLY_REF_SPLICE ZNF433-AS1^ENSG00000219665.8 chr19:12001822:+ EIF4G3^ENSG00000075151.22 chr1:21089213:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2497:11768:24583,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1173:28676:19931 . YES_LDAS 0.0205 GT 1.8295 AG 1.9656 "[""INTERCHROMOSOMAL[chr19--chr1]""]" chr19:12001822-chr1:21089213 False 0 Read count too low: 2 < 5 FAIL 2
ZCCHC7--PABPC1L 2 0 2.0 0.0 ONLY_REF_SPLICE ZCCHC7^ENSG00000147905.18 chr9:37126942:+ PABPC1L^ENSG00000101104.13 chr20:44912660:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2117:51029:26979,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2236:1307:8819 . YES_LDAS 0.0205 GT 1.9656 AG 1.6402 "[""INTERCHROMOSOMAL[chr9--chr20]""]" chr9:37126942-chr20:44912660 False 0 Read count too low: 2 < 5 FAIL 2
WASHC3--CABLES1 2 0 2.0 0.0 ONLY_REF_SPLICE WASHC3^ENSG00000120860.11 chr12:102050189:- CABLES1^ENSG00000134508.12 chr18:23257227:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1419:47882:29263,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2203:1817:20996 . NO_LDAS 0.0205 GT 1.9656 AG 1.5329 "[""INTERCHROMOSOMAL[chr12--chr18]""]" chr12:102050189-chr18:23257227 False 0 Read count too low: 2 < 5 FAIL 2
UMAD1--GLCCI1 2 0 2.0 0.0 ONLY_REF_SPLICE UMAD1^ENSG00000219545.11 chr7:7801743:+ GLCCI1^ENSG00000106415.13 chr7:8003908:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1153:38942:3830,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1171:16112:3690 . YES_LDAS 0.0205 GT 1.9656 AG 1.7465 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS[776]""]" chr7:7801743-chr7:8003908 True pair|recurrent breakpoints 0 Blacklisted FAIL 2
TMEM131L--PGM3 2 0 2.0 0.0 INCL_NON_REF_SPLICE TMEM131L^ENSG00000121210.16 chr4:153621849:+ PGM3^ENSG00000013375.16 chr6:83182894:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1175:33044:6843,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1287:6113:4979 . NO_LDAS 0.0205 GT 1.5656 AG 1.9219 "[""INTERCHROMOSOMAL[chr4--chr6]""]" chr4:153621849-chr6:83182894 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 2
SF3B3--EIF2B1 2 0 2.0 0.0 ONLY_REF_SPLICE SF3B3^ENSG00000189091.13 chr16:70530917:+ EIF2B1^ENSG00000111361.13 chr12:123622761:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1297:12019:7754,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1297:12027:7740 . YES_LDAS 0.0205 GT 1.5656 AG 1.8892 "[""INTERCHROMOSOMAL[chr16--chr12]""]" chr16:70530917-chr12:123622761 False 0 Read count too low: 2 < 5 FAIL 2
SELENOS--FAM131B 2 0 0.67 0.0 INCL_NON_REF_SPLICE SELENOS^ENSG00000131871.15 chr15:101277421:- FAM131B^ENSG00000159784.18 chr7:143362795:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1274:50915:27707,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1424:4632:5162 . NO_LDAS 0.0069 GT 0.9183 AG 0.9183 "[""INTERCHROMOSOMAL[chr15--chr7]""]" chr15:101277421-chr7:143362795 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 2
SAMD5--AL033504.1 2 0 2.0 0.0 ONLY_REF_SPLICE SAMD5^ENSG00000203727.4 chr6:147509387:+ AL033504.1^ENSG00000227681.5 chr6:147733729:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1283:13588:6969,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2303:26136:9533 . YES_LDAS 0.0205 GT 1.8295 AG 1.5219 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[90682]""]" chr6:147509387-chr6:147733729 True pair|recurrent breakpoints 0 Blacklisted FAIL 2
RIMKLA--CAMSAP1 2 0 2.0 0.0 INCL_NON_REF_SPLICE RIMKLA^ENSG00000177181.15 chr1:42419655:+ CAMSAP1^ENSG00000130559.19 chr9:135883078:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1110:9575:11705,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1133:37170:8805 . NO_LDAS 0.0205 GT 1.9899 AG 1.9656 "[""INTERCHROMOSOMAL[chr1--chr9]""]" chr1:42419655-chr9:135883078 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 2
REV1--CDC42 2 0 2.0 0.0 ONLY_REF_SPLICE REV1^ENSG00000135945.10 chr2:99489817:- CDC42^ENSG00000070831.17 chr1:22078429:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2201:22633:25325,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2328:43917:26685 . NO_LDAS 0.0205 GT 1.4566 AG 1.8892 "[""INTERCHROMOSOMAL[chr2--chr1]""]" chr2:99489817-chr1:22078429 False 0 Read count too low: 2 < 5 FAIL 2
RETREG3--RUBCN 2 0 2.0 0.0 ONLY_REF_SPLICE RETREG3^ENSG00000141699.11 chr17:42609086:- RUBCN^ENSG00000145016.16 chr3:197697049:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1468:22730:17254,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2370:1032:20841 . YES_LDAS 0.0205 GT 1.9329 AG 1.8892 "[""INTERCHROMOSOMAL[chr17--chr3]""]" chr17:42609086-chr3:197697049 False 0 Read count too low: 2 < 5 FAIL 2
RBBP4--C1QBP 2 0 1.0 0.0 ONLY_REF_SPLICE RBBP4^ENSG00000162521.19 chr1:32662337:+ C1QBP^ENSG00000108561.8 chr17:5434966:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2175:22746:20309,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2104:13273:26825 . YES_LDAS 0.0102 GT 1.9329 AG 1.9329 "[""INTERCHROMOSOMAL[chr1--chr17]""]" chr1:32662337-chr17:5434966 True pair|recurrent breakpoints 0 Blacklisted FAIL 2
PTBP2--PLEKHA2 2 0 2.0 0.0 ONLY_REF_SPLICE PTBP2^ENSG00000117569.19 chr1:96723594:+ PLEKHA2^ENSG00000169499.15 chr8:38946124:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1242:27381:28170,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2150:8394:7390 . YES_LDAS 0.0205 GT 1.8295 AG 1.8892 "[""INTERCHROMOSOMAL[chr1--chr8]""]" chr1:96723594-chr8:38946124 False 0 Read count too low: 2 < 5 FAIL 2
PRSS53--VKORC1 2 0 2.0 0.0 ONLY_REF_SPLICE PRSS53^ENSG00000151006.7 chr16:31087537:- VKORC1^ENSG00000167397.15 chr16:31091342:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1222:34533:11691,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2241:41401:29697 . YES_LDAS 0.0205 GT 1.9329 AG 1.9086 "[""INTRACHROMOSOMAL[chr16:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[1214]""]" chr16:31087537-chr16:31091342 False 0 Read count too low: 2 < 5 FAIL 2
PPP2R2D--JAKMIP3 2 0 2.0 0.0 ONLY_REF_SPLICE PPP2R2D^ENSG00000175470.20 chr10:131947791:+ JAKMIP3^ENSG00000188385.12 chr10:132104672:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1395:9414:6157,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1144:11024:4237 . YES_LDAS 0.0205 GT 1.8892 AG 1.5219 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr10:0.08Mb]"",""NEIGHBORS[76502]""]" chr10:131947791-chr10:132104672 True pair|recurrent breakpoints 0 Blacklisted FAIL 2
PMS2P11--CCDC146 2 0 1.0 0.0 INCL_NON_REF_SPLICE PMS2P11^ENSG00000241350.1 chr7:77015855:+ CCDC146^ENSG00000135205.15 chr7:77236947:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2497:6315:8805,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2286:20319:16750 . YES_LDAS 0.0102 GT 1.4566 AG 1.9329 "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr7:0.11Mb]""]" chr7:77015855-chr7:77236947 True pair|recurrent breakpoints 0 Blacklisted FAIL 2
PGAP1--FAM131B 2 0 0.67 0.0 INCL_NON_REF_SPLICE PGAP1^ENSG00000197121.15 chr2:196926631:- FAM131B^ENSG00000159784.18 chr7:143362795:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1274:50915:27707,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1424:4632:5162 . NO_LDAS 0.0069 GT 0.9183 AG 0.9183 "[""INTERCHROMOSOMAL[chr2--chr7]""]" chr2:196926631-chr7:143362795 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 2
OR2T2--OR2T27 2 0 2.0 0.0 ONLY_REF_SPLICE OR2T2^ENSG00000196240.5 chr1:248449392:+ OR2T27^ENSG00000187701.4 chr1:248650888:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2326:25666:9421,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1442:44354:22761 . YES_LDAS 0.0205 GT 1.6402 AG 1.8323 "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr1:0.19Mb]""]" chr1:248449392-chr1:248650888 False 0 Excluded annotation pattern: DGD_PARALOGS FAIL 2
NSF--LRRC37A 2 0 0.5 0.0 INCL_NON_REF_SPLICE NSF^ENSG00000073969.18 chr17:46704854:+ LRRC37A^ENSG00000176681.14 chr17:46293932:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2340:33546:28814,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1350:13839:26572 . YES_LDAS 0.0051 GT 1.6729 AG 1.9329 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr17:0.25Mb]""]" chr17:46704854-chr17:46293932 False 0 Excluded annotation pattern: GTEx_recurrent_StarF2019 FAIL 2
NPEPPS--TBC1D3C 2 0 0.33 0.0 ONLY_REF_SPLICE NPEPPS^ENSG00000141279.17 chr17:47592545:+ TBC1D3C^ENSG00000278299.5 chr17:38067067:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2202:41709:10949,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1152:40075:23784 . YES_LDAS 0.0034 GT 1.9329 AG 1.7465 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr17:9.45Mb]""]" chr17:47592545-chr17:38067067 False 0 Excluded annotation pattern: GTEx_recurrent_StarF2019 FAIL 2
NFATC3--SRPK2 2 0 2.0 0.0 ONLY_REF_SPLICE NFATC3^ENSG00000072736.19 chr16:68085784:+ SRPK2^ENSG00000135250.17 chr7:105203785:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1161:41507:6311,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1129:23296:9912 . YES_LDAS 0.0205 GT 1.7056 AG 1.8062 "[""INTERCHROMOSOMAL[chr16--chr7]""]" chr16:68085784-chr7:105203785 False 0 Read count too low: 2 < 5 FAIL 2
MRPS18A--SLC22A20P 2 0 1.0 0.0 INCL_NON_REF_SPLICE MRPS18A^ENSG00000096080.12 chr6:43687668:- SLC22A20P^ENSG00000197847.12 chr11:65238748:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1254:49621:11425,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2330:23701:8034 . YES_LDAS 0.0102 GT 1.7232 AG 1.7819 "[""INTERCHROMOSOMAL[chr6--chr11]""]" chr6:43687668-chr11:65238748 True pair|recurrent breakpoints 0 Blacklisted FAIL 2
MRPS18A--AC074117.1 2 0 1.0 0.0 INCL_NON_REF_SPLICE MRPS18A^ENSG00000096080.12 chr6:43687668:- AC074117.1^ENSG00000234072.1 chr2:27358885:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1254:49621:11425,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2330:23701:8034 . YES_LDAS 0.0102 GT 1.7232 AG 1.7819 "[""INTERCHROMOSOMAL[chr6--chr2]""]" chr6:43687668-chr2:27358885 True pair|recurrent breakpoints 0 Blacklisted FAIL 2
MIR4435-2HG--AC083899.1 2 0 2.0 0.0 ONLY_REF_SPLICE MIR4435-2HG^ENSG00000172965.17 chr2:111344061:- AC083899.1^ENSG00000204745.4 chr2:87125198:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1177:12140:8300,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2355:10983:20225 . YES_LDAS 0.0205 GT 1.8295 AG 1.8062 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr2:23.81Mb]""]" chr2:111344061-chr2:87125198 True pair|recurrent breakpoints 0 Blacklisted FAIL 2
MED24--FADS2 2 0 2.0 0.0 ONLY_REF_SPLICE MED24^ENSG00000008838.20 chr17:40036121:- FADS2^ENSG00000134824.14 chr11:61828495:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1347:31726:15461,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2324:1065:2766 . YES_LDAS 0.0205 GT 1.7465 AG 1.8323 "[""INTERCHROMOSOMAL[chr17--chr11]""]" chr17:40036121-chr11:61828495 False 0 Read count too low: 2 < 5 FAIL 2
MATR3--PARP8 2 0 2.0 0.0 ONLY_REF_SPLICE MATR3^ENSG00000280987.4 chr5:139278408:+ PARP8^ENSG00000151883.19 chr5:50815432:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2457:43788:22032,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2287:50438:28338 . YES_LDAS 0.0205 GT 1.8892 AG 1.9899 "[""INTRACHROMOSOMAL[chr5:88.43Mb]""]" chr5:139278408-chr5:50815432 False 0 Read count too low: 2 < 5 FAIL 2
LRRC8D--ZNF326 2 0 2.0 0.0 ONLY_REF_SPLICE LRRC8D^ENSG00000171492.14 chr1:89843782:+ ZNF326^ENSG00000162664.17 chr1:89998110:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1143:34800:28632,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2459:20901:14928 . YES_LDAS 0.0205 GT 1.7819 AG 1.7819 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr1:0.06Mb]"",""NEIGHBORS[58499]""]" chr1:89843782-chr1:89998110 True pair|recurrent breakpoints 0 Blacklisted FAIL 2
IRAK3--UBE2N 2 0 2.0 0.0 ONLY_REF_SPLICE IRAK3^ENSG00000090376.11 chr12:66228370:+ UBE2N^ENSG00000177889.10 chr12:93411299:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2122:44953:7039,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1368:13491:17871 . YES_LDAS 0.0205 GT 1.9329 AG 1.9899 "[""INTRACHROMOSOMAL[chr12:27.15Mb]""]" chr12:66228370-chr12:93411299 False 0 Read count too low: 2 < 5 FAIL 2
IFFO1--TMEM159 2 0 2.0 0.0 INCL_NON_REF_SPLICE IFFO1^ENSG00000010295.20 chr12:6549756:- TMEM159^ENSG00000011638.11 chr16:21161234:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1146:7140:9113,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1479:11452:28072 . NO_LDAS 0.0205 GT 1.9899 AG 1.9899 "[""INTERCHROMOSOMAL[chr12--chr16]""]" chr12:6549756-chr16:21161234 True pair|recurrent breakpoints 0 Blacklisted FAIL 2
HTR1D--FCER2 2 0 1.0 0.0 INCL_NON_REF_SPLICE HTR1D^ENSG00000179546.4 chr1:23193541:- FCER2^ENSG00000104921.15 chr19:7697589:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2283:3427:4867,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1181:10158:5596 . NO_LDAS 0.0102 GC 1.7056 AG 1.7819 "[""INTERCHROMOSOMAL[chr1--chr19]""]" chr1:23193541-chr19:7697589 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 2
HLA-B--ZBTB43 2 0 2.0 0.0 INCL_NON_REF_SPLICE HLA-B^ENSG00000234745.13 chr6:31354629:- ZBTB43^ENSG00000169155.10 chr9:126833169:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2219:46943:16680,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2387:10635:15166 . NO_LDAS 0.0205 GT 1.9656 AG 1.9086 "[""INTERCHROMOSOMAL[chr6--chr9]""]" chr6:31354629-chr9:126833169 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 2
G3BP2--TMEM138 2 0 2.0 0.0 ONLY_REF_SPLICE G3BP2^ENSG00000138757.15 chr4:75646338:- TMEM138^ENSG00000149483.12 chr11:61368597:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1354:32737:27637,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2146:8427:17591 . YES_LDAS 0.0205 GT 1.6895 AG 1.9656 "[""INTERCHROMOSOMAL[chr4--chr11]""]" chr4:75646338-chr11:61368597 False 0 Read count too low: 2 < 5 FAIL 2
FOXO1--LINC00598 2 0 2.0 0.0 ONLY_REF_SPLICE FOXO1^ENSG00000150907.10 chr13:40665583:- LINC00598^ENSG00000215483.11 chr13:40474095:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2396:44557:8511,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1424:50697:7179 . YES_LDAS 0.0205 GT 1.7232 AG 1.8295 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[19860]""]" chr13:40665583-chr13:40474095 True pair|recurrent breakpoints 0 Blacklisted FAIL 2
FBXO25--SEPTIN14 2 0 2.0 0.0 ONLY_REF_SPLICE FBXO25^ENSG00000147364.17 chr8:435707:+ SEPTIN14^ENSG00000154997.9 chr7:55796092:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1280:43149:11649,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2305:31750:11803 . YES_LDAS 0.0205 GT 1.7819 AG 1.9899 "[""INTERCHROMOSOMAL[chr8--chr7]""]" chr8:435707-chr7:55796092 False 0 Read count too low: 2 < 5 FAIL 2
FAM193B--STAT5B 2 0 2.0 0.0 INCL_NON_REF_SPLICE FAM193B^ENSG00000146067.16 chr5:177554489:- STAT5B^ENSG00000173757.10 chr17:42201805:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1447:21168:4461,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2234:34557:3662 . NO_LDAS 0.0205 GT 1.231 AG 1.5546 "[""INTERCHROMOSOMAL[chr5--chr17]""]" chr5:177554489-chr17:42201805 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 2
DPEP1--MLLT10 2 0 2.0 0.0 ONLY_REF_SPLICE DPEP1^ENSG00000015413.9 chr16:89626493:+ MLLT10^ENSG00000078403.17 chr10:21551816:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1364:1154:11047,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2117:12019:5904 . NO_LDAS 0.0205 GT 1.9329 AG 1.9329 "[""INTERCHROMOSOMAL[chr16--chr10]""]" chr16:89626493-chr10:21551816 False 0 Read count too low: 2 < 5 FAIL 2
CYP20A1--SPECC1 2 0 2.0 0.0 INCL_NON_REF_SPLICE CYP20A1^ENSG00000119004.16 chr2:203246921:+ SPECC1^ENSG00000128487.18 chr17:20315855:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2492:21549:10276,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1474:24906:26320 . NO_LDAS 0.0205 GT 1.7465 AG 1.9656 "[""INTERCHROMOSOMAL[chr2--chr17]""]" chr2:203246921-chr17:20315855 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 2
CTSC--RAB38 2 0 2.0 0.0 ONLY_REF_SPLICE CTSC^ENSG00000109861.17 chr11:88296133:- RAB38^ENSG00000123892.12 chr11:88149955:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2338:49791:20127,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1426:25577:1813 . YES_LDAS 0.0205 GT 1.9899 AG 1.8062 "[""GTEx_recurrent_StarF2019"",""Babiceanu_Normal"",""ChimerSeq"",""Greger_Normal"",""INTRACHROMOSOMAL[chr11:0.09Mb]"",""NEIGHBORS[89626]""]" chr11:88296133-chr11:88149955 True pair|recurrent breakpoints 0 Blacklisted FAIL 2
CCNY--CREM 2 0 2.0 0.0 ONLY_REF_SPLICE CCNY^ENSG00000108100.18 chr10:35337207:+ CREM^ENSG00000095794.19 chr10:35206895:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1396:17140:14802,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2457:7302:2163 . YES_LDAS 0.0205 GT 1.7056 AG 1.9656 "[""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr10:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[34067]""]" chr10:35337207-chr10:35206895 False 0 Read count too low: 2 < 5 FAIL 2
BX571818.1--TMEM200A 2 0 2.0 0.0 ONLY_REF_SPLICE BX571818.1^ENSG00000285417.1 chr1:206053265:+ TMEM200A^ENSG00000164484.12 chr6:130440407:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1370:1008:24050,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2448:12876:1869 . NO_LDAS 0.0205 GT 1.9656 AG 1.7465 "[""INTERCHROMOSOMAL[chr1--chr6]""]" chr1:206053265-chr6:130440407 False 0 Read count too low: 2 < 5 FAIL 2
ARPC1B--PLCG2 2 0 2.0 0.0 ONLY_REF_SPLICE ARPC1B^ENSG00000130429.15 chr7:99385778:+ PLCG2^ENSG00000197943.10 chr16:81912597:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1198:49022:21178,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1286:49435:12924 . YES_LDAS 0.0205 GT 1.5058 AG 1.9329 "[""INTERCHROMOSOMAL[chr7--chr16]""]" chr7:99385778-chr16:81912597 False 0 Read count too low: 2 < 5 FAIL 2
AC109322.1--PPP1R14B 2 0 2.0 0.0 INCL_NON_REF_SPLICE AC109322.1^ENSG00000255224.1 chr8:144078756:- PPP1R14B^ENSG00000173457.11 chr11:64246600:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2422:31006:3284,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2334:14211:5050 . YES_LDAS 0.0205 GT 1.7968 AG 1.9219 "[""INTERCHROMOSOMAL[chr8--chr11]""]" chr8:144078756-chr11:64246600 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 2
AC015712.1--C1QBP 2 0 1.0 0.0 ONLY_REF_SPLICE AC015712.1^ENSG00000232386.9 chr15:100855348:+ C1QBP^ENSG00000108561.8 chr17:5434966:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2175:22746:20309,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2104:13273:26825 . YES_LDAS 0.0102 GT 1.9329 AG 1.9329 "[""INTERCHROMOSOMAL[chr15--chr17]""]" chr15:100855348-chr17:5434966 True pair|recurrent breakpoints 0 Blacklisted FAIL 2
SLC7A5--SMG1P1 2 1 1.0 0.17 ONLY_REF_SPLICE SLC7A5^ENSG00000103257.9 chr16:87868885:- SMG1P1^ENSG00000237296.9 chr16:22451620:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1261:48278:13947,&V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1496:41830:9898 &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2348:22398:8525 YES_LDAS 0.0119 GT 1.5301 AG 1.9656 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:65.34Mb]""]" chr16:87868885-chr16:22451620 True pair|recurrent breakpoints 0 Blacklisted FAIL 3
ZYG11A--FNTA 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZYG11A^ENSG00000203995.10 chr1:52892975:+ FNTA^ENSG00000168522.13 chr8:43059092:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2124:39468:8441 . YES_LDAS 0.0102 GT 1.8062 AG 1.7056 "[""INTERCHROMOSOMAL[chr1--chr8]""]" chr1:52892975-chr8:43059092 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZSWIM6--AC138866.1 1 0 0.1 0.0 ONLY_REF_SPLICE ZSWIM6^ENSG00000130449.6 chr5:61494410:+ AC138866.1^ENSG00000254701.3 chr5:70207745:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1257:8993:15741 . YES_LDAS 0.001 GT 1.7968 AG 1.9656 "[""INTRACHROMOSOMAL[chr5:8.65Mb]""]" chr5:61494410-chr5:70207745 False 0 Read count too low: 1 < 5 FAIL 1
ZSCAN26--TFCP2 1 0 1.0 0.0 ONLY_REF_SPLICE ZSCAN26^ENSG00000197062.12 chr6:28272787:+ TFCP2^ENSG00000135457.10 chr12:51118772:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1488:23765:18740 . NO_LDAS 0.0102 GT 1.5628 AG 1.8295 "[""INTERCHROMOSOMAL[chr6--chr12]""]" chr6:28272787-chr12:51118772 False 0 Read count too low: 1 < 5 FAIL 1
ZNRF2--BCL3 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZNRF2^ENSG00000180233.11 chr7:30285780:+ BCL3^ENSG00000069399.15 chr19:44751227:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1173:15772:24625 . YES_LDAS 0.0102 GT 1.2729 AG 1.9086 "[""INTERCHROMOSOMAL[chr7--chr19]""]" chr7:30285780-chr19:44751227 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZNF93--DPY19L3 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF93^ENSG00000184635.16 chr19:19901091:+ DPY19L3^ENSG00000178904.19 chr19:32432716:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1377:44330:22355 . YES_LDAS 0.0102 GT 1.8323 AG 1.5628 "[""INTRACHROMOSOMAL[chr19:12.44Mb]""]" chr19:19901091-chr19:32432716 False 0 Read count too low: 1 < 5 FAIL 1
ZNF891--EIF3I 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZNF891^ENSG00000214029.6 chr12:133117942:- EIF3I^ENSG00000084623.12 chr1:32234327:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2381:28902:1575 . YES_LDAS 0.0102 GT 0.7219 AG 1.9656 "[""INTERCHROMOSOMAL[chr12--chr1]""]" chr12:133117942-chr1:32234327 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZNF84--EDRF1 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF84^ENSG00000198040.11 chr12:133048848:+ EDRF1^ENSG00000107938.18 chr10:125763301:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1365:1849:21556 . YES_LDAS 0.0102 GT 1.9656 AG 1.7232 "[""INTERCHROMOSOMAL[chr12--chr10]""]" chr12:133048848-chr10:125763301 False 0 Read count too low: 1 < 5 FAIL 1
ZNF791--OVOL2 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF791^ENSG00000173875.14 chr19:12624710:+ OVOL2^ENSG00000125850.11 chr20:17957037:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1143:13976:11397 . YES_LDAS 0.0102 GT 1.7968 AG 1.9219 "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr19--chr20]""]" chr19:12624710-chr20:17957037 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
ZNF783--YTHDC2 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF783^ENSG00000204946.10 chr7:149262357:+ YTHDC2^ENSG00000047188.16 chr5:113591041:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2479:36167:16708 . YES_LDAS 0.0102 GT 1.2867 AG 1.9329 "[""INTERCHROMOSOMAL[chr7--chr5]""]" chr7:149262357-chr5:113591041 False 0 Read count too low: 1 < 5 FAIL 1
ZNF770--ZNF277 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZNF770^ENSG00000198146.4 chr15:34979644:- ZNF277^ENSG00000198839.10 chr7:112286873:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2111:48003:8062 . NO_LDAS 0.0102 GT 1.371 AG 1.8062 "[""INTERCHROMOSOMAL[chr15--chr7]""]" chr15:34979644-chr7:112286873 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZNF75D--AC234771.4 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF75D^ENSG00000186376.15 chrX:135343261:- AC234771.4^ENSG00000236491.1 chrX:135193082:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2445:22107:4433 . YES_LDAS 0.0102 GT 1.6895 AG 1.9899 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chrX:0.05Mb]"",""NEIGHBORS[54241]""]" chrX:135343261-chrX:135193082 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
ZNF736--USP10 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF736^ENSG00000234444.10 chr7:64336982:+ USP10^ENSG00000103194.16 chr16:84758716:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2337:25901:1813 . YES_LDAS 0.0102 GT 1.7056 AG 1.8062 "[""INTERCHROMOSOMAL[chr7--chr16]""]" chr7:64336982-chr16:84758716 False 0 Read count too low: 1 < 5 FAIL 1
ZNF720--ZNF479 1 0 0.33 0.0 ONLY_REF_SPLICE ZNF720^ENSG00000197302.10 chr16:31723353:+ ZNF479^ENSG00000185177.13 chr7:57126718:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2155:28514:15839 . NO_LDAS 0.0034 GT 1.8892 AG 1.9656 "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr16--chr7]""]" chr16:31723353-chr7:57126718 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
ZNF720--SCAF4 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF720^ENSG00000197302.10 chr16:31723353:+ SCAF4^ENSG00000156304.15 chr21:31706357:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1214:26378:9870 . YES_LDAS 0.0102 GT 1.8892 AG 1.6402 "[""INTERCHROMOSOMAL[chr16--chr21]""]" chr16:31723353-chr21:31706357 False 0 Read count too low: 1 < 5 FAIL 1
ZNF718--PCM1 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF718^ENSG00000250312.8 chr4:124673:+ PCM1^ENSG00000078674.18 chr8:17989859:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2430:29550:19566 . YES_LDAS 0.0102 GT 1.7819 AG 1.8062 "[""INTERCHROMOSOMAL[chr4--chr8]""]" chr4:124673-chr8:17989859 False 0 Read count too low: 1 < 5 FAIL 1
ZNF708--ANAPC4 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF708^ENSG00000182141.10 chr19:21329210:- ANAPC4^ENSG00000053900.11 chr4:25393805:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1464:3484:29291 . YES_LDAS 0.0102 GT 1.8323 AG 1.5628 "[""INTERCHROMOSOMAL[chr19--chr4]""]" chr19:21329210-chr4:25393805 False 0 Read count too low: 1 < 5 FAIL 1
ZNF7--USP48 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF7^ENSG00000147789.15 chr8:144837507:+ USP48^ENSG00000090686.16 chr1:21724095:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1443:50179:25844 . YES_LDAS 0.0102 GT 1.8256 AG 1.9656 "[""INTERCHROMOSOMAL[chr8--chr1]""]" chr8:144837507-chr1:21724095 False 0 Read count too low: 1 < 5 FAIL 1
ZNF664--ARID4B 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF664^ENSG00000179195.16 chr12:123988138:+ ARID4B^ENSG00000054267.22 chr1:235260752:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1159:42130:15629 . NO_LDAS 0.0102 GT 1.9329 AG 1.9329 "[""INTERCHROMOSOMAL[chr12--chr1]""]" chr12:123988138-chr1:235260752 False 0 Read count too low: 1 < 5 FAIL 1
ZNF654--ATM 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF654^ENSG00000175105.8 chr3:88113196:+ ATM^ENSG00000149311.19 chr11:108227595:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2348:26014:16273 . YES_LDAS 0.0102 GT 1.9656 AG 1.7819 "[""INTERCHROMOSOMAL[chr3--chr11]""]" chr3:88113196-chr11:108227595 False 0 Read count too low: 1 < 5 FAIL 1
ZNF644--TAF1 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF644^ENSG00000122482.21 chr1:90937485:- TAF1^ENSG00000147133.16 chrX:71367499:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1270:2715:21458 . YES_LDAS 0.0102 GT 1.9899 AG 1.7968 "[""INTERCHROMOSOMAL[chr1--chrX]""]" chr1:90937485-chrX:71367499 False 0 Read count too low: 1 < 5 FAIL 1
ZNF609--FZD6 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF609^ENSG00000180357.9 chr15:64500166:+ FZD6^ENSG00000164930.12 chr8:103318590:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2333:30658:27063 . YES_LDAS 0.0102 GT 1.8892 AG 1.2729 "[""INTERCHROMOSOMAL[chr15--chr8]""]" chr15:64500166-chr8:103318590 False 0 Read count too low: 1 < 5 FAIL 1
ZNF607--GSK3A 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZNF607^ENSG00000198182.13 chr19:37711610:- GSK3A^ENSG00000105723.13 chr19:42232990:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2426:51854:16105 . NO_LDAS 0.0102 GT 1.8256 AG 1.8892 "[""INTRACHROMOSOMAL[chr19:4.51Mb]""]" chr19:37711610-chr19:42232990 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZNF586--ZNF714 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZNF586^ENSG00000083828.16 chr19:57769878:+ ZNF714^ENSG00000160352.16 chr19:21062606:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1171:25440:18922 . YES_LDAS 0.0102 GT 1.8323 AG 1.9219 "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:36.64Mb]""]" chr19:57769878-chr19:21062606 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
ZNF567--ZGRF1 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF567^ENSG00000189042.13 chr19:36727214:+ ZGRF1^ENSG00000138658.16 chr4:112547408:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2215:20780:13765 . YES_LDAS 0.0102 GT 1.9329 AG 1.585 "[""INTERCHROMOSOMAL[chr19--chr4]""]" chr19:36727214-chr4:112547408 False 0 Read count too low: 1 < 5 FAIL 1
ZNF558--YY1AP1 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZNF558^ENSG00000167785.9 chr19:8832283:- YY1AP1^ENSG00000163374.20 chr1:155660442:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1154:46377:28310 . NO_LDAS 0.0102 GT 1.4716 AG 1.9329 "[""INTERCHROMOSOMAL[chr19--chr1]""]" chr19:8832283-chr1:155660442 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZNF544--ZNF41 1 0 0.5 0.0 INCL_NON_REF_SPLICE ZNF544^ENSG00000198131.14 chr19:58262789:+ ZNF41^ENSG00000147124.12 chrX:47447575:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1416:5943:19987 . NO_LDAS 0.0051 GT 1.9899 AG 1.9086 "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr19--chrX]""]" chr19:58262789-chrX:47447575 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
ZNF500--PLCXD1 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF500^ENSG00000103199.14 chr16:4752522:- PLCXD1^ENSG00000182378.15 chrX:284167:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1468:9729:12140 . YES_LDAS 0.0102 GT 1.5656 AG 1.9086 "[""INTERCHROMOSOMAL[chr16--chrX]""]" chr16:4752522-chrX:284167 False 0 Read count too low: 1 < 5 FAIL 1
ZNF493--ZNF417 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZNF493^ENSG00000196268.12 chr19:21425190:+ ZNF417^ENSG00000173480.11 chr19:57909827:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2206:5077:23195 . NO_LDAS 0.0102 GT 1.7968 AG 1.8323 "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:36.47Mb]""]" chr19:21425190-chr19:57909827 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
ZNF486--FGD2 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF486^ENSG00000256229.8 chr19:20167360:+ FGD2^ENSG00000146192.15 chr6:37013609:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1373:8224:14774 . YES_LDAS 0.0102 GT 1.7968 AG 1.7465 "[""INTERCHROMOSOMAL[chr19--chr6]""]" chr19:20167360-chr6:37013609 False 0 Read count too low: 1 < 5 FAIL 1
ZNF433-AS1--ZNF100 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZNF433-AS1^ENSG00000219665.8 chr19:11987823:+ ZNF100^ENSG00000197020.11 chr19:21767511:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2277:47865:26264 . YES_LDAS 0.0102 GT 1.6895 AG 1.8062 "[""INTRACHROMOSOMAL[chr19:9.68Mb]""]" chr19:11987823-chr19:21767511 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZNF431--AC092687.2 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF431^ENSG00000196705.8 chr19:21143643:+ AC092687.2^ENSG00000236162.1 chr2:10719035:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2485:42486:3242 . NO_LDAS 0.0102 GT 1.6895 AG 1.9219 "[""INTERCHROMOSOMAL[chr19--chr2]""]" chr19:21143643-chr2:10719035 False 0 Read count too low: 1 < 5 FAIL 1
ZNF408--POLR1A 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF408^ENSG00000175213.3 chr11:46702765:+ POLR1A^ENSG00000068654.16 chr2:86039462:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2469:27034:29109 . YES_LDAS 0.0102 GT 1.9086 AG 1.8323 "[""INTERCHROMOSOMAL[chr11--chr2]""]" chr11:46702765-chr2:86039462 False 0 Read count too low: 1 < 5 FAIL 1
ZNF365--SURF1 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZNF365^ENSG00000138311.18 chr10:62480248:+ SURF1^ENSG00000148290.10 chr9:133354741:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1282:4616:2303 . NO_LDAS 0.0102 GT 1.9219 AG 1.8892 "[""INTERCHROMOSOMAL[chr10--chr9]""]" chr10:62480248-chr9:133354741 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZNF346--RGS3 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZNF346^ENSG00000113761.12 chr5:177066528:+ RGS3^ENSG00000138835.22 chr9:113583568:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2429:26289:19076 . YES_LDAS 0.0102 GT 1.9656 AG 1.8323 "[""INTERCHROMOSOMAL[chr5--chr9]""]" chr5:177066528-chr9:113583568 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZNF345--GTF2F1 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZNF345^ENSG00000251247.11 chr19:36851221:+ GTF2F1^ENSG00000125651.14 chr19:6387411:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2282:42243:25970 . NO_LDAS 0.0102 GT 1.8256 AG 1.3383 "[""INTRACHROMOSOMAL[chr19:30.46Mb]""]" chr19:36851221-chr19:6387411 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZNF283--AACS 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF283^ENSG00000167637.18 chr19:43837179:+ AACS^ENSG00000081760.17 chr12:125142092:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1309:25610:15180 . YES_LDAS 0.0102 GT 1.9086 AG 1.9656 "[""INTERCHROMOSOMAL[chr19--chr12]""]" chr19:43837179-chr12:125142092 False 0 Read count too low: 1 < 5 FAIL 1
ZNF266--ZNF619 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZNF266^ENSG00000174652.19 chr19:9413191:- ZNF619^ENSG00000177873.14 chr3:40487891:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1241:35358:26432 . NO_LDAS 0.0102 GT 1.3996 AG 1.9656 "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr19--chr3]""]" chr19:9413191-chr3:40487891 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
ZNF233--MCM7 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZNF233^ENSG00000159915.12 chr19:44266250:+ MCM7^ENSG00000166508.18 chr7:100097745:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2295:36458:13093 . NO_LDAS 0.0102 GT 1.5546 AG 1.9329 "[""INTERCHROMOSOMAL[chr19--chr7]""]" chr19:44266250-chr7:100097745 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZNF169--HNRNPUL1 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF169^ENSG00000175787.17 chr9:94293069:+ HNRNPUL1^ENSG00000105323.17 chr19:41268223:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1481:29283:28184 . YES_LDAS 0.0102 GT 1.9329 AG 1.9219 "[""INTERCHROMOSOMAL[chr9--chr19]""]" chr9:94293069-chr19:41268223 False 0 Read count too low: 1 < 5 FAIL 1
ZNF141--RPS24 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF141^ENSG00000131127.14 chr4:337986:+ RPS24^ENSG00000138326.21 chr10:78054531:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1288:43853:5638 . YES_LDAS 0.0102 GT 1.4295 AG 1.4566 "[""INTERCHROMOSOMAL[chr4--chr10]""]" chr4:337986-chr10:78054531 False 0 Read count too low: 1 < 5 FAIL 1
ZNF140--EP400 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF140^ENSG00000196387.10 chr12:133083561:+ EP400^ENSG00000183495.14 chr12:132005077:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2342:41677:6801 . YES_LDAS 0.0102 GT 1.8892 AG 1.6729 "[""INTRACHROMOSOMAL[chr12:1.00Mb]""]" chr12:133083561-chr12:132005077 False 0 Read count too low: 1 < 5 FAIL 1
ZNF107--VAC14 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF107^ENSG00000196247.11 chr7:64666285:+ VAC14^ENSG00000103043.15 chr16:70688090:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2424:9543:2289 . NO_LDAS 0.0102 GT 1.7968 AG 1.8892 "[""INTERCHROMOSOMAL[chr7--chr16]""]" chr7:64666285-chr16:70688090 False 0 Read count too low: 1 < 5 FAIL 1
ZMYND11--WDR37 1 0 1.0 0.0 ONLY_REF_SPLICE ZMYND11^ENSG00000015171.20 chr10:240111:+ WDR37^ENSG00000047056.16 chr10:1080011:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2184:26152:18894 . YES_LDAS 0.0102 GT 1.9656 AG 1.8892 "[""INTRACHROMOSOMAL[chr10:0.79Mb]""]" chr10:240111-chr10:1080011 False 0 Read count too low: 1 < 5 FAIL 1
ZMIZ1--RBCK1 1 0 1.0 0.0 ONLY_REF_SPLICE ZMIZ1^ENSG00000108175.18 chr10:79243738:+ RBCK1^ENSG00000125826.21 chr20:417526:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1368:42121:29487 . YES_LDAS 0.0102 GT 1.9899 AG 1.6402 "[""INTERCHROMOSOMAL[chr10--chr20]""]" chr10:79243738-chr20:417526 False 0 Read count too low: 1 < 5 FAIL 1
ZGPAT--LIME1 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZGPAT^ENSG00000197114.12 chr20:63736186:+ LIME1^ENSG00000203896.10 chr20:63736197:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2344:17690:6899 . YES_LDAS 0.0102 GT 1.6402 AG 1.6729 "[""ConjoinG"",""INTRACHROMOSOMAL[chr20:0.00Mb]"",""NEIGHBORS[141]""]" chr20:63736186-chr20:63736197 False 0 Excluded annotation pattern: ConjoinG FAIL 1
ZGPAT--HSF1 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZGPAT^ENSG00000197114.12 chr20:63735297:+ HSF1^ENSG00000185122.11 chr8:144311174:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1275:42728:25914 . YES_LDAS 0.0102 GT 1.3996 AG 1.9329 "[""INTERCHROMOSOMAL[chr20--chr8]""]" chr20:63735297-chr8:144311174 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZFC3H1--SNORD3A 1 0 0.5 0.0 INCL_NON_REF_SPLICE ZFC3H1^ENSG00000133858.17 chr12:71611786:- SNORD3A^ENSG00000263934.5 chr17:19188019:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1139:4697:26320 . YES_LDAS 0.0051 GT 1.9329 AG 1.9656 "[""INTERCHROMOSOMAL[chr12--chr17]""]" chr12:71611786-chr17:19188019 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZFAND6--MTMR2 1 0 1.0 0.0 ONLY_REF_SPLICE ZFAND6^ENSG00000086666.19 chr15:80059809:+ MTMR2^ENSG00000087053.20 chr11:95888261:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1385:15845:22004 . YES_LDAS 0.0102 GT 1.5058 AG 1.6895 "[""INTERCHROMOSOMAL[chr15--chr11]""]" chr15:80059809-chr11:95888261 False 0 Read count too low: 1 < 5 FAIL 1
ZFAND3--ZNF148 1 0 1.0 0.0 ONLY_REF_SPLICE ZFAND3^ENSG00000156639.12 chr6:37929999:+ ZNF148^ENSG00000163848.20 chr3:125288228:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1414:40269:20253 . YES_LDAS 0.0102 GT 1.9656 AG 1.7968 "[""INTERCHROMOSOMAL[chr6--chr3]""]" chr6:37929999-chr3:125288228 False 0 Read count too low: 1 < 5 FAIL 1
ZFAND3--TLK2P2 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZFAND3^ENSG00000156639.12 chr6:38152455:+ TLK2P2^ENSG00000228828.1 chr10:37820578:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2411:32405:17142 . YES_LDAS 0.0102 GT 1.8323 AG 1.7968 "[""INTERCHROMOSOMAL[chr6--chr10]""]" chr6:38152455-chr10:37820578 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZFAND3--NDUFB2 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZFAND3^ENSG00000156639.12 chr6:38116708:+ NDUFB2^ENSG00000090266.13 chr7:140702953:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1115:4503:5078 . YES_LDAS 0.0102 GT 1.9329 AG 1.9086 "[""INTERCHROMOSOMAL[chr6--chr7]""]" chr6:38116708-chr7:140702953 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZFAND3--BTBD9 1 0 1.0 0.0 ONLY_REF_SPLICE ZFAND3^ENSG00000156639.12 chr6:37929999:+ BTBD9^ENSG00000183826.18 chr6:38345093:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2362:38012:6927 . YES_LDAS 0.0102 GT 1.9656 AG 1.7465 "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr6:0.01Mb]"",""LOCAL_INVERSION:+:-:[13827]""]" chr6:37929999-chr6:38345093 False 0 Read count too low: 1 < 5 FAIL 1
ZEB1--UGP2 1 0 0.5 0.0 INCL_NON_REF_SPLICE ZEB1^ENSG00000148516.22 chr10:31461143:+ UGP2^ENSG00000169764.16 chr2:63887994:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2347:27074:15839 . NO_LDAS 0.0051 GT 1.8892 AG 1.8062 "[""INTERCHROMOSOMAL[chr10--chr2]""]" chr10:31461143-chr2:63887994 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZEB1--SHANK2 1 0 1.0 0.0 ONLY_REF_SPLICE ZEB1^ENSG00000148516.22 chr10:31319292:+ SHANK2^ENSG00000162105.20 chr11:71224796:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2238:13556:6717 . YES_LDAS 0.0102 GT 1.8256 AG 1.9656 "[""INTERCHROMOSOMAL[chr10--chr11]""]" chr10:31319292-chr11:71224796 False 0 Read count too low: 1 < 5 FAIL 1
ZDHHC8--PRPF19 1 0 0.33 0.0 INCL_NON_REF_SPLICE ZDHHC8^ENSG00000099904.16 chr22:20146145:+ PRPF19^ENSG00000110107.9 chr11:60901369:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1197:36119:3424 . NO_LDAS 0.0034 GC 1.1033 AG 1.6895 "[""INTERCHROMOSOMAL[chr22--chr11]""]" chr22:20146145-chr11:60901369 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZDHHC14--STAG1 1 0 1.0 0.0 ONLY_REF_SPLICE ZDHHC14^ENSG00000175048.17 chr6:157382266:+ STAG1^ENSG00000118007.13 chr3:136521417:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2184:17512:2219 . NO_LDAS 0.0102 GT 1.7056 AG 1.8256 "[""INTERCHROMOSOMAL[chr6--chr3]""]" chr6:157382266-chr3:136521417 False 0 Read count too low: 1 < 5 FAIL 1
ZDHHC14--NUDT14 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZDHHC14^ENSG00000175048.17 chr6:157381596:+ NUDT14^ENSG00000183828.15 chr14:105181239:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1498:7464:9674 . NO_LDAS 0.0102 GT 1.2729 AG 1.1589 "[""INTERCHROMOSOMAL[chr6--chr14]""]" chr6:157381596-chr14:105181239 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZDHHC14--CRTC1 1 0 1.0 0.0 ONLY_REF_SPLICE ZDHHC14^ENSG00000175048.17 chr6:157382266:+ CRTC1^ENSG00000105662.16 chr19:18759551:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2270:50600:17408 . YES_LDAS 0.0102 GT 1.7056 AG 1.7056 "[""INTERCHROMOSOMAL[chr6--chr19]""]" chr6:157382266-chr19:18759551 False 0 Read count too low: 1 < 5 FAIL 1
ZCCHC7--EBLN3P 1 0 1.0 0.0 ONLY_REF_SPLICE ZCCHC7^ENSG00000147905.18 chr9:37327834:+ EBLN3P^ENSG00000281649.2 chr9:37080859:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2414:3710:14802 . NO_LDAS 0.0102 GT 1.9086 AG 1.8892 "[""INTRACHROMOSOMAL[chr9:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[29646]""]" chr9:37327834-chr9:37080859 False 0 Read count too low: 1 < 5 FAIL 1
ZBTB40--PANK3 1 0 1.0 0.0 ONLY_REF_SPLICE ZBTB40^ENSG00000184677.18 chr1:22452004:+ PANK3^ENSG00000120137.7 chr5:168568998:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1172:9656:8959 . YES_LDAS 0.0102 GT 1.9656 AG 1.7465 "[""INTERCHROMOSOMAL[chr1--chr5]""]" chr1:22452004-chr5:168568998 False 0 Read count too low: 1 < 5 FAIL 1
ZBTB25--WASHC4 1 0 1.0 0.0 ONLY_REF_SPLICE ZBTB25^ENSG00000089775.12 chr14:64487114:- WASHC4^ENSG00000136051.15 chr12:105127129:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1143:26645:6997 . YES_LDAS 0.0102 GT 1.8295 AG 1.8892 "[""INTERCHROMOSOMAL[chr14--chr12]""]" chr14:64487114-chr12:105127129 False 0 Read count too low: 1 < 5 FAIL 1
ZADH2--DTX3 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZADH2^ENSG00000180011.7 chr18:75208850:- DTX3^ENSG00000178498.16 chr12:57604863:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1302:31871:24316 . YES_LDAS 0.0102 GT 1.7968 AG 1.5628 "[""INTERCHROMOSOMAL[chr18--chr12]""]" chr18:75208850-chr12:57604863 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZADH2--C16orf54 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZADH2^ENSG00000180011.7 chr18:75205362:- C16orf54^ENSG00000185905.4 chr16:29744612:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1419:51797:9449 . NO_LDAS 0.0102 GT 1.4716 AG 1.7968 "[""INTERCHROMOSOMAL[chr18--chr16]""]" chr18:75205362-chr16:29744612 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
YY1AP1--SCYL3 1 0 1.0 0.0 INCL_NON_REF_SPLICE YY1AP1^ENSG00000163374.20 chr1:155660784:- SCYL3^ENSG00000000457.14 chr1:169894091:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2380:5716:11103 . NO_LDAS 0.0102 GT 1.8892 AG 1.9899 "[""INTRACHROMOSOMAL[chr1:14.16Mb]""]" chr1:155660784-chr1:169894091 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
YWHAH--SEC62 1 0 1.0 0.0 ONLY_REF_SPLICE YWHAH^ENSG00000128245.15 chr22:31944820:+ SEC62^ENSG00000008952.17 chr3:169975608:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2474:29040:1560 . YES_LDAS 0.0102 GT 1.9656 AG 1.9086 "[""INTERCHROMOSOMAL[chr22--chr3]""]" chr22:31944820-chr3:169975608 False 0 Read count too low: 1 < 5 FAIL 1
YWHAE--PFKL 1 0 1.0 0.0 ONLY_REF_SPLICE YWHAE^ENSG00000108953.17 chr17:1400047:- PFKL^ENSG00000141959.17 chr21:44306681:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1188:21435:5428 . YES_LDAS 0.0102 GT 1.9329 AG 1.9656 "[""INTERCHROMOSOMAL[chr17--chr21]""]" chr17:1400047-chr21:44306681 False 0 Read count too low: 1 < 5 FAIL 1
YWHAE--CRK 1 0 1.0 0.0 ONLY_REF_SPLICE YWHAE^ENSG00000108953.17 chr17:1400047:- CRK^ENSG00000167193.8 chr17:1437155:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2413:28878:5036 . YES_LDAS 0.0102 GT 1.9329 AG 1.8323 "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr17:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[20467]""]" chr17:1400047-chr17:1437155 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
YTHDC2--DCP2 1 0 1.0 0.0 ONLY_REF_SPLICE YTHDC2^ENSG00000047188.16 chr5:113515362:+ DCP2^ENSG00000172795.17 chr5:112985835:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1257:22463:1939 . NO_LDAS 0.0102 GT 1.8295 AG 1.8295 "[""INTRACHROMOSOMAL[chr5:0.49Mb]""]" chr5:113515362-chr5:112985835 False 0 Read count too low: 1 < 5 FAIL 1
YTHDC2--AL450405.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE YTHDC2^ENSG00000047188.16 chr5:113581607:+ AL450405.1^ENSG00000230202.1 chr6:117999341:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2368:47364:29347 . NO_LDAS 0.0102 GT 1.9329 AG 1.5656 "[""INTERCHROMOSOMAL[chr5--chr6]""]" chr5:113581607-chr6:117999341 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
YLPM1--SUSD6 1 0 1.0 0.0 ONLY_REF_SPLICE YLPM1^ENSG00000119596.18 chr14:74782325:+ SUSD6^ENSG00000100647.8 chr14:69658513:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1393:11849:27301 . YES_LDAS 0.0102 GT 1.8256 AG 1.9656 "[""INTRACHROMOSOMAL[chr14:5.05Mb]""]" chr14:74782325-chr14:69658513 False 0 Read count too low: 1 < 5 FAIL 1
YLPM1--SNX9 1 0 1.0 0.0 INCL_NON_REF_SPLICE YLPM1^ENSG00000119596.18 chr14:74799697:+ SNX9^ENSG00000130340.17 chr6:157928283:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1310:43367:6899 . NO_LDAS 0.0102 GT 1.9656 AG 1.9086 "[""INTERCHROMOSOMAL[chr14--chr6]""]" chr14:74799697-chr6:157928283 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
YJEFN3--GATAD2A 1 0 1.0 0.0 ONLY_REF_SPLICE YJEFN3^ENSG00000250067.12 chr19:19535450:+ GATAD2A^ENSG00000167491.17 chr19:19495754:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1230:5611:14003 . YES_LDAS 0.0102 GT 1.9219 AG 1.8892 "[""INTRACHROMOSOMAL[chr19:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[19930]""]" chr19:19535450-chr19:19495754 False 0 Read count too low: 1 < 5 FAIL 1
YIPF6--BAZ1B 1 0 0.5 0.0 ONLY_REF_SPLICE YIPF6^ENSG00000181704.12 chrX:68510776:+ BAZ1B^ENSG00000009954.11 chr7:73508471:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2433:6841:12910 . YES_LDAS 0.0051 GC 1.9329 AG 1.5656 "[""INTERCHROMOSOMAL[chrX--chr7]""]" chrX:68510776-chr7:73508471 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
YARS2--NRDC 1 0 1.0 0.0 ONLY_REF_SPLICE YARS2^ENSG00000139131.13 chr12:32753918:- NRDC^ENSG00000078618.22 chr1:51814813:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1356:19389:21248 . YES_LDAS 0.0102 GT 1.9086 AG 1.8256 "[""INTERCHROMOSOMAL[chr12--chr1]""]" chr12:32753918-chr1:51814813 False 0 Read count too low: 1 < 5 FAIL 1
XRRA1--CCDC144A 1 0 0.33 0.0 ONLY_REF_SPLICE XRRA1^ENSG00000166435.15 chr11:74906239:- CCDC144A^ENSG00000170160.17 chr17:16732538:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1330:17568:25129 . NO_LDAS 0.0034 GT 1.9656 AG 1.7465 "[""INTERCHROMOSOMAL[chr11--chr17]""]" chr11:74906239-chr17:16732538 False 0 Read count too low: 1 < 5 FAIL 1
XRN2--PHF3 1 0 1.0 0.0 ONLY_REF_SPLICE XRN2^ENSG00000088930.8 chr20:21303473:+ PHF3^ENSG00000118482.12 chr6:63684129:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2201:2537:26895 . NO_LDAS 0.0102 GT 1.6895 AG 1.6729 "[""INTERCHROMOSOMAL[chr20--chr6]""]" chr20:21303473-chr6:63684129 False 0 Read count too low: 1 < 5 FAIL 1
XRN2--METTL16 1 0 1.0 0.0 ONLY_REF_SPLICE XRN2^ENSG00000088930.8 chr20:21357792:+ METTL16^ENSG00000127804.13 chr17:2477885:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2439:10554:20799 . NO_LDAS 0.0102 GT 1.9656 AG 1.7056 "[""INTERCHROMOSOMAL[chr20--chr17]""]" chr20:21357792-chr17:2477885 False 0 Read count too low: 1 < 5 FAIL 1
XRN2--CMPK1 1 0 1.0 0.0 ONLY_REF_SPLICE XRN2^ENSG00000088930.8 chr20:21303473:+ CMPK1^ENSG00000162368.13 chr1:47368469:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1112:36248:23434 . YES_LDAS 0.0102 GT 1.6895 AG 1.8295 "[""INTERCHROMOSOMAL[chr20--chr1]""]" chr20:21303473-chr1:47368469 False 0 Read count too low: 1 < 5 FAIL 1
XRN1--NUP85 1 0 1.0 0.0 ONLY_REF_SPLICE XRN1^ENSG00000114127.11 chr3:142432661:- NUP85^ENSG00000125450.11 chr17:75215754:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1388:39775:26741 . YES_LDAS 0.0102 GT 1.6895 AG 1.7968 "[""INTERCHROMOSOMAL[chr3--chr17]""]" chr3:142432661-chr17:75215754 False 0 Read count too low: 1 < 5 FAIL 1
XRN1--ATP1B3 1 0 1.0 0.0 ONLY_REF_SPLICE XRN1^ENSG00000114127.11 chr3:142347234:- ATP1B3^ENSG00000069849.11 chr3:141903620:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1124:32907:21346 . YES_LDAS 0.0102 GT 1.6895 AG 1.6729 "[""INTRACHROMOSOMAL[chr3:0.38Mb]""]" chr3:142347234-chr3:141903620 False 0 Read count too low: 1 < 5 FAIL 1
XPR1--CCNI 1 0 1.0 0.0 ONLY_REF_SPLICE XPR1^ENSG00000143324.14 chr1:180682411:+ CCNI^ENSG00000118816.11 chr4:77066405:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2341:3330:29641 . YES_LDAS 0.0102 GT 1.9899 AG 1.9329 "[""INTERCHROMOSOMAL[chr1--chr4]""]" chr1:180682411-chr4:77066405 False 0 Read count too low: 1 < 5 FAIL 1
XPO5--GRHPR 1 0 1.0 0.0 ONLY_REF_SPLICE XPO5^ENSG00000124571.18 chr6:43555836:- GRHPR^ENSG00000137106.18 chr9:37424845:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1166:28207:25648 . YES_LDAS 0.0102 GT 1.7968 AG 1.8295 "[""INTERCHROMOSOMAL[chr6--chr9]""]" chr6:43555836-chr9:37424845 False 0 Read count too low: 1 < 5 FAIL 1
XPO1--SMIM14 1 0 1.0 0.0 ONLY_REF_SPLICE XPO1^ENSG00000082898.19 chr2:61490642:- SMIM14^ENSG00000163683.12 chr4:39572463:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2455:47841:16862 . NO_LDAS 0.0102 GT 1.5058 AG 1.9656 "[""INTERCHROMOSOMAL[chr2--chr4]""]" chr2:61490642-chr4:39572463 False 0 Read count too low: 1 < 5 FAIL 1
XPC--ABCB4 1 0 1.0 0.0 INCL_NON_REF_SPLICE XPC^ENSG00000154767.15 chr3:14170438:- ABCB4^ENSG00000005471.19 chr7:87472650:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2463:10182:19482 . NO_LDAS 0.0102 GT 1.3996 AG 1.7465 "[""INTERCHROMOSOMAL[chr3--chr7]""]" chr3:14170438-chr7:87472650 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
XIAP--THOC2 1 0 1.0 0.0 ONLY_REF_SPLICE XIAP^ENSG00000101966.13 chrX:123859905:+ THOC2^ENSG00000125676.20 chrX:123712908:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1183:20149:28618 . YES_LDAS 0.0102 GT 1.6895 AG 1.7232 "[""INTRACHROMOSOMAL[chrX:0.13Mb]""]" chrX:123859905-chrX:123712908 False 0 Read count too low: 1 < 5 FAIL 1
WIZ--NPM1P24 1 0 0.33 0.0 INCL_NON_REF_SPLICE WIZ^ENSG00000011451.21 chr19:15439119:- NPM1P24^ENSG00000215086.2 chr10:72918148:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1358:37106:6283 . NO_LDAS 0.0034 GT 1.231 AG 1.4295 "[""INTERCHROMOSOMAL[chr19--chr10]""]" chr19:15439119-chr10:72918148 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
WFDC8--ECM2 1 0 1.0 0.0 INCL_NON_REF_SPLICE WFDC8^ENSG00000158901.12 chr20:45579211:- ECM2^ENSG00000106823.12 chr9:92514874:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1239:15052:4377 . NO_LDAS 0.0102 GT 1.2419 AG 1.231 "[""INTERCHROMOSOMAL[chr20--chr9]""]" chr20:45579211-chr9:92514874 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
WDR92--PATJ 1 0 1.0 0.0 ONLY_REF_SPLICE WDR92^ENSG00000243667.7 chr2:68131277:- PATJ^ENSG00000132849.21 chr1:61797287:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1423:16808:4083 . YES_LDAS 0.0102 GT 1.9329 AG 1.9219 "[""INTERCHROMOSOMAL[chr2--chr1]""]" chr2:68131277-chr1:61797287 False 0 Read count too low: 1 < 5 FAIL 1
WDR75--NREP 1 0 1.0 0.0 ONLY_REF_SPLICE WDR75^ENSG00000115368.10 chr2:189441578:+ NREP^ENSG00000134986.14 chr5:111755830:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2432:15805:1476 . YES_LDAS 0.0102 GT 1.9329 AG 1.8256 "[""INTERCHROMOSOMAL[chr2--chr5]""]" chr2:189441578-chr5:111755830 False 0 Read count too low: 1 < 5 FAIL 1
WDR70--AC034234.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE WDR70^ENSG00000082068.9 chr5:37381685:+ AC034234.1^ENSG00000248935.1 chr5:60030860:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1444:45657:2766 . NO_LDAS 0.0102 GT 1.9329 AG 1.9656 "[""INTRACHROMOSOMAL[chr5:22.27Mb]""]" chr5:37381685-chr5:60030860 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
WDR6--MTG1 1 0 1.0 0.0 INCL_NON_REF_SPLICE WDR6^ENSG00000178252.18 chr3:49012245:+ MTG1^ENSG00000148824.19 chr10:133395713:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1322:48674:14662 . YES_LDAS 0.0102 GT 1.9086 AG 1.8323 "[""INTERCHROMOSOMAL[chr3--chr10]""]" chr3:49012245-chr10:133395713 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
WDR4--TMEM258 1 0 1.0 0.0 ONLY_REF_SPLICE WDR4^ENSG00000160193.12 chr21:42853569:- TMEM258^ENSG00000134825.16 chr11:61790602:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1274:26783:15447 . YES_LDAS 0.0102 GT 1.7465 AG 1.8892 "[""INTERCHROMOSOMAL[chr21--chr11]""]" chr21:42853569-chr11:61790602 False 0 Read count too low: 1 < 5 FAIL 1
WDR33--UHRF2 1 0 1.0 0.0 ONLY_REF_SPLICE WDR33^ENSG00000136709.12 chr2:127763062:- UHRF2^ENSG00000147854.17 chr9:6420912:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2208:48011:26012 . YES_LDAS 0.0102 GT 1.9219 AG 1.5656 "[""INTERCHROMOSOMAL[chr2--chr9]""]" chr2:127763062-chr9:6420912 False 0 Read count too low: 1 < 5 FAIL 1
WDR33--STAT5B 1 0 1.0 0.0 ONLY_REF_SPLICE WDR33^ENSG00000136709.12 chr2:127811012:- STAT5B^ENSG00000173757.10 chr17:42217464:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1202:40366:23223 . YES_LDAS 0.0102 GT 1.8256 AG 1.9329 "[""INTERCHROMOSOMAL[chr2--chr17]""]" chr2:127811012-chr17:42217464 False 0 Read count too low: 1 < 5 FAIL 1
WDR27--TAF4 1 0 1.0 0.0 ONLY_REF_SPLICE WDR27^ENSG00000184465.16 chr6:169672255:- TAF4^ENSG00000130699.18 chr20:62014707:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1490:47299:8749 . YES_LDAS 0.0102 GT 1.8295 AG 1.9329 "[""INTERCHROMOSOMAL[chr6--chr20]""]" chr6:169672255-chr20:62014707 False 0 Read count too low: 1 < 5 FAIL 1
WDR27--AL135910.1 1 0 1.0 0.0 ONLY_REF_SPLICE WDR27^ENSG00000184465.16 chr6:169582836:- AL135910.1^ENSG00000272848.2 chr6:169430712:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2214:26880:14466 . YES_LDAS 0.0102 GT 1.6729 AG 1.9656 "[""INTRACHROMOSOMAL[chr6:0.00Mb]"",""NEIGHBORS[4737]""]" chr6:169582836-chr6:169430712 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
WDR12--BRPF3 1 0 1.0 0.0 ONLY_REF_SPLICE WDR12^ENSG00000138442.10 chr2:202907865:- BRPF3^ENSG00000096070.19 chr6:36213880:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1219:26370:2317 . YES_LDAS 0.0102 GT 1.5546 AG 1.9086 "[""INTERCHROMOSOMAL[chr2--chr6]""]" chr2:202907865-chr6:36213880 False 0 Read count too low: 1 < 5 FAIL 1
WDPCP--SMC6 1 0 1.0 0.0 ONLY_REF_SPLICE WDPCP^ENSG00000143951.16 chr2:63813622:- SMC6^ENSG00000163029.16 chr2:17745951:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2128:26443:9393 . YES_LDAS 0.0102 GT 1.7056 AG 1.8892 "[""INTRACHROMOSOMAL[chr2:45.32Mb]""]" chr2:63813622-chr2:17745951 False 0 Read count too low: 1 < 5 FAIL 1
WDFY4--LINC00847 1 0 1.0 0.0 INCL_NON_REF_SPLICE WDFY4^ENSG00000128815.19 chr10:48743159:+ LINC00847^ENSG00000245060.8 chr5:180831573:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1450:28166:29557 . YES_LDAS 0.0102 GC 1.8256 AG 1.4295 "[""INTERCHROMOSOMAL[chr10--chr5]""]" chr10:48743159-chr5:180831573 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
WDFY2--RB1 1 0 1.0 0.0 ONLY_REF_SPLICE WDFY2^ENSG00000139668.9 chr13:51584824:+ RB1^ENSG00000139687.16 chr13:48452993:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1221:15700:15166 . YES_LDAS 0.0102 GT 1.9086 AG 1.6729 "[""INTRACHROMOSOMAL[chr13:2.99Mb]""]" chr13:51584824-chr13:48452993 False 0 Read count too low: 1 < 5 FAIL 1
WASHC4--TM9SF2 1 0 1.0 0.0 ONLY_REF_SPLICE WASHC4^ENSG00000136051.15 chr12:105152451:+ TM9SF2^ENSG00000125304.10 chr13:99554304:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1364:47493:29291 . YES_LDAS 0.0102 GT 1.9899 AG 1.8323 "[""INTERCHROMOSOMAL[chr12--chr13]""]" chr12:105152451-chr13:99554304 False 0 Read count too low: 1 < 5 FAIL 1
WASH3P--VCP 1 0 0.17 0.0 ONLY_REF_SPLICE WASH3P^ENSG00000185596.16 chr15:101966223:+ VCP^ENSG00000165280.18 chr9:35068362:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2124:49322:2415 . YES_LDAS 0.0017 GT 1.9656 AG 1.8062 "[""INTERCHROMOSOMAL[chr15--chr9]""]" chr15:101966223-chr9:35068362 False 0 Read count too low: 1 < 5 FAIL 1
WASH3P--CEP350 1 0 0.17 0.0 ONLY_REF_SPLICE WASH3P^ENSG00000185596.16 chr15:101966223:+ CEP350^ENSG00000135837.16 chr1:180019949:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1351:17309:9071 . YES_LDAS 0.0017 GT 1.9656 AG 1.7465 "[""INTERCHROMOSOMAL[chr15--chr1]""]" chr15:101966223-chr1:180019949 False 0 Read count too low: 1 < 5 FAIL 1
WAPL--IQCJ-SCHIP1 1 0 1.0 0.0 INCL_NON_REF_SPLICE WAPL^ENSG00000062650.20 chr10:86500675:- IQCJ-SCHIP1^ENSG00000283154.2 chr3:159886285:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2261:25602:25928 . NO_LDAS 0.0102 GT 1.8295 AG 1.8295 "[""INTERCHROMOSOMAL[chr10--chr3]""]" chr10:86500675-chr3:159886285 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
VTI1A--AL158212.1 1 0 1.0 0.0 ONLY_REF_SPLICE VTI1A^ENSG00000151532.14 chr10:112668998:+ AL158212.1^ENSG00000225292.2 chr10:112905977:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2171:41660:24737 . NO_LDAS 0.0102 GT 1.7465 AG 1.9899 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr10:0.07Mb]"",""NEIGHBORS[69991]""]" chr10:112668998-chr10:112905977 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
VPS8--TNIK 1 0 1.0 0.0 ONLY_REF_SPLICE VPS8^ENSG00000156931.16 chr3:184849195:+ TNIK^ENSG00000154310.17 chr3:171228221:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1460:21961:7712 . YES_LDAS 0.0102 GT 1.9329 AG 1.9899 "[""INTRACHROMOSOMAL[chr3:13.35Mb]""]" chr3:184849195-chr3:171228221 False 0 Read count too low: 1 < 5 FAIL 1
VPS51--C11orf80 1 0 1.0 0.0 ONLY_REF_SPLICE VPS51^ENSG00000149823.9 chr11:65096478:+ C11orf80^ENSG00000173715.18 chr11:66796281:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2183:8370:11271 . YES_LDAS 0.0102 GT 1.9656 AG 1.9656 "[""INTRACHROMOSOMAL[chr11:1.63Mb]""]" chr11:65096478-chr11:66796281 False 0 Read count too low: 1 < 5 FAIL 1
VPS41--TMEM38B 1 0 1.0 0.0 ONLY_REF_SPLICE VPS41^ENSG00000006715.16 chr7:38789801:- TMEM38B^ENSG00000095209.12 chr9:105773865:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1358:43731:28744 . NO_LDAS 0.0102 GT 1.5656 AG 1.8892 "[""INTERCHROMOSOMAL[chr7--chr9]""]" chr7:38789801-chr9:105773865 False 0 Read count too low: 1 < 5 FAIL 1
VPS37A--ATAD2 1 0 1.0 0.0 ONLY_REF_SPLICE VPS37A^ENSG00000155975.10 chr8:17286427:+ ATAD2^ENSG00000156802.13 chr8:123380677:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2388:23668:21206 . YES_LDAS 0.0102 GT 1.9329 AG 1.9086 "[""INTRACHROMOSOMAL[chr8:106.02Mb]""]" chr8:17286427-chr8:123380677 False 0 Read count too low: 1 < 5 FAIL 1
VPS13D--GAB3 1 0 1.0 0.0 INCL_NON_REF_SPLICE VPS13D^ENSG00000048707.15 chr1:12308645:+ GAB3^ENSG00000160219.12 chrX:154677756:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1484:25181:14550 . NO_LDAS 0.0102 GT 1.8062 AG 1.8256 "[""INTERCHROMOSOMAL[chr1--chrX]""]" chr1:12308645-chrX:154677756 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
VPS13D--DAP3 1 0 1.0 0.0 ONLY_REF_SPLICE VPS13D^ENSG00000048707.15 chr1:12253826:+ DAP3^ENSG00000132676.16 chr1:155731356:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1472:28457:5596 . YES_LDAS 0.0102 GT 1.9086 AG 1.9329 "[""INTRACHROMOSOMAL[chr1:143.18Mb]""]" chr1:12253826-chr1:155731356 False 0 Read count too low: 1 < 5 FAIL 1
VPS13C--LINC02785 1 0 1.0 0.0 INCL_NON_REF_SPLICE VPS13C^ENSG00000129003.19 chr15:62007354:- LINC02785^ENSG00000226822.3 chr1:108072572:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1498:44880:7978 . NO_LDAS 0.0102 GT 1.6402 AG 1.8892 "[""INTERCHROMOSOMAL[chr15--chr1]""]" chr15:62007354-chr1:108072572 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
VPS13A--OSTF1 1 0 1.0 0.0 ONLY_REF_SPLICE VPS13A^ENSG00000197969.14 chr9:77177804:+ OSTF1^ENSG00000134996.12 chr9:75117504:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1485:50163:15979 . YES_LDAS 0.0102 GT 1.8892 AG 1.9329 "[""INTRACHROMOSOMAL[chr9:2.03Mb]""]" chr9:77177804-chr9:75117504 False 0 Read count too low: 1 < 5 FAIL 1
VPS13A--ATP13A3 1 0 1.0 0.0 ONLY_REF_SPLICE VPS13A^ENSG00000197969.14 chr9:77351446:+ ATP13A3^ENSG00000133657.16 chr3:194454392:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2191:10805:27848 . YES_LDAS 0.0102 GT 1.7968 AG 1.7819 "[""INTERCHROMOSOMAL[chr9--chr3]""]" chr9:77351446-chr3:194454392 False 0 Read count too low: 1 < 5 FAIL 1
VGLL4--PBX3 1 0 1.0 0.0 ONLY_REF_SPLICE VGLL4^ENSG00000144560.15 chr3:11601833:- PBX3^ENSG00000167081.18 chr9:125748550:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2340:12253:3676 . YES_LDAS 0.0102 GT 1.4566 AG 1.8892 "[""INTERCHROMOSOMAL[chr3--chr9]""]" chr3:11601833-chr9:125748550 False 0 Read count too low: 1 < 5 FAIL 1
VGLL4--ATG7 1 0 1.0 0.0 ONLY_REF_SPLICE VGLL4^ENSG00000144560.15 chr3:11702971:- ATG7^ENSG00000197548.12 chr3:11347877:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1349:34986:3032 . YES_LDAS 0.0102 GT 1.8295 AG 1.5546 "[""DEEPEST2019"",""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr3:0.00Mb]"",""NEIGHBORS_OVERLAP:-:+:[1596]""]" chr3:11702971-chr3:11347877 False 0 Read count too low: 1 < 5 FAIL 1
VCP--KCNQ1OT1 1 0 1.0 0.0 INCL_NON_REF_SPLICE VCP^ENSG00000165280.18 chr9:35060347:- KCNQ1OT1^ENSG00000269821.1 chr11:2685988:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1204:13442:15236 . NO_LDAS 0.0102 GT 1.6895 AG 1.9656 "[""INTERCHROMOSOMAL[chr9--chr11]""]" chr9:35060347-chr11:2685988 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
VAV2--BRD3 1 0 1.0 0.0 ONLY_REF_SPLICE VAV2^ENSG00000160293.17 chr9:133806081:- BRD3^ENSG00000169925.17 chr9:134053590:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2212:22616:20001 . YES_LDAS 0.0102 GT 1.8892 AG 1.5656 "[""DEEPEST2019"",""TumorFusionsNAR2018"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr9:0.04Mb]"",""LOCAL_REARRANGEMENT:-:[37701]""]" chr9:133806081-chr9:134053590 False 0 Read count too low: 1 < 5 FAIL 1
VAPA--POLR3B 1 0 1.0 0.0 ONLY_REF_SPLICE VAPA^ENSG00000101558.14 chr18:9914335:+ POLR3B^ENSG00000013503.10 chr12:106496055:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1415:48521:6745 . YES_LDAS 0.0102 GT 1.7465 AG 1.5628 "[""INTERCHROMOSOMAL[chr18--chr12]""]" chr18:9914335-chr12:106496055 False 0 Read count too low: 1 < 5 FAIL 1
VAPA--ANKRD12 1 0 1.0 0.0 ONLY_REF_SPLICE VAPA^ENSG00000101558.14 chr18:9914335:+ ANKRD12^ENSG00000101745.17 chr18:9254211:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2169:34654:2513 . YES_LDAS 0.0102 GT 1.7465 AG 1.9899 "[""INTRACHROMOSOMAL[chr18:0.63Mb]""]" chr18:9914335-chr18:9254211 False 0 Read count too low: 1 < 5 FAIL 1
UVSSA--MAEA 1 0 1.0 0.0 ONLY_REF_SPLICE UVSSA^ENSG00000163945.19 chr4:1355245:+ MAEA^ENSG00000090316.16 chr4:1332757:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1241:19736:10472 . YES_LDAS 0.0102 GT 1.3383 AG 1.6729 "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr4:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[5544]""]" chr4:1355245-chr4:1332757 False 0 Read count too low: 1 < 5 FAIL 1
UTP6--COPRSP1 1 0 1.0 0.0 INCL_NON_REF_SPLICE UTP6^ENSG00000108651.10 chr17:31865366:- COPRSP1^ENSG00000236440.1 chr2:140683798:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2320:7294:16049 . YES_LDAS 0.0102 GT 1.9899 AG 1.9329 "[""INTERCHROMOSOMAL[chr17--chr2]""]" chr17:31865366-chr2:140683798 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
UTP25--AK7 1 0 1.0 0.0 INCL_NON_REF_SPLICE UTP25^ENSG00000117597.18 chr1:209830947:+ AK7^ENSG00000140057.9 chr14:96472687:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2393:32276:27371 . NO_LDAS 0.0102 GT 1.231 AG 1.2729 "[""INTERCHROMOSOMAL[chr1--chr14]""]" chr1:209830947-chr14:96472687 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
USP6NL--USP25 1 0 1.0 0.0 ONLY_REF_SPLICE USP6NL^ENSG00000148429.14 chr10:11597631:- USP25^ENSG00000155313.15 chr21:15777904:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1191:9705:29445 . YES_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTERCHROMOSOMAL[chr10--chr21]""]" chr10:11597631-chr21:15777904 False 0 Read count too low: 1 < 5 FAIL 1
USP48--XRCC5 1 0 1.0 0.0 INCL_NON_REF_SPLICE USP48^ENSG00000090686.16 chr1:21679086:- XRCC5^ENSG00000079246.16 chr2:216113016:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1378:26103:15979 . NO_LDAS 0.0102 GT 1.4295 AG 1.7819 "[""INTERCHROMOSOMAL[chr1--chr2]""]" chr1:21679086-chr2:216113016 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
USP48--KLF13 1 0 1.0 0.0 INCL_NON_REF_SPLICE USP48^ENSG00000090686.16 chr1:21721036:- KLF13^ENSG00000169926.11 chr15:31375531:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2411:7367:6535 . NO_LDAS 0.0102 GT 1.8295 AG 1.7819 "[""INTERCHROMOSOMAL[chr1--chr15]""]" chr1:21721036-chr15:31375531 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
USP48--AC241585.1 1 0 0.5 0.0 INCL_NON_REF_SPLICE USP48^ENSG00000090686.16 chr1:21782824:- AC241585.1^ENSG00000223612.3 chr1:145233329:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2219:1218:26320 . YES_LDAS 0.0051 GT 1.7465 AG 1.5219 "[""INTRACHROMOSOMAL[chr1:123.45Mb]""]" chr1:21782824-chr1:145233329 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
USP47--BTBD10 1 0 1.0 0.0 ONLY_REF_SPLICE USP47^ENSG00000170242.19 chr11:11842224:+ BTBD10^ENSG00000148925.11 chr11:13421838:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1278:25375:27385 . YES_LDAS 0.0102 GT 1.9329 AG 1.8323 "[""INTRACHROMOSOMAL[chr11:1.43Mb]""]" chr11:11842224-chr11:13421838 False 0 Read count too low: 1 < 5 FAIL 1
USP4--CR381670.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE USP4^ENSG00000114316.13 chr3:49324702:- CR381670.1^ENSG00000278931.1 chr21:8863998:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2448:21541:21780 . YES_LDAS 0.0102 GT 1.9656 AG 1.9086 "[""INTERCHROMOSOMAL[chr3--chr21]""]" chr3:49324702-chr21:8863998 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
USP3--KIAA0930 1 0 1.0 0.0 ONLY_REF_SPLICE USP3^ENSG00000140455.17 chr15:63504830:+ KIAA0930^ENSG00000100364.19 chr22:45212107:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2311:24210:8272 . YES_LDAS 0.0102 GT 1.7819 AG 1.8892 "[""INTERCHROMOSOMAL[chr15--chr22]""]" chr15:63504830-chr22:45212107 False 0 Read count too low: 1 < 5 FAIL 1
USP3--IARS1 1 0 1.0 0.0 ONLY_REF_SPLICE USP3^ENSG00000140455.17 chr15:63574403:+ IARS1^ENSG00000196305.18 chr9:92229126:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1346:7383:28814 . YES_LDAS 0.0102 GT 1.7968 AG 1.9086 "[""INTERCHROMOSOMAL[chr15--chr9]""]" chr15:63574403-chr9:92229126 False 0 Read count too low: 1 < 5 FAIL 1
USP28--USP25 1 0 1.0 0.0 ONLY_REF_SPLICE USP28^ENSG00000048028.11 chr11:113840598:- USP25^ENSG00000155313.15 chr21:15762891:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2396:29590:27287 . NO_LDAS 0.0102 GT 1.8892 AG 1.9656 "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr11--chr21]""]" chr11:113840598-chr21:15762891 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
USP25--HOOK3 1 0 1.0 0.0 ONLY_REF_SPLICE USP25^ENSG00000155313.15 chr21:15730438:+ HOOK3^ENSG00000168172.9 chr8:42964311:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1122:35836:25493 . YES_LDAS 0.0102 GT 1.5301 AG 1.9656 "[""INTERCHROMOSOMAL[chr21--chr8]""]" chr21:15730438-chr8:42964311 False 0 Read count too low: 1 < 5 FAIL 1
USP14--YES1 1 0 1.0 0.0 ONLY_REF_SPLICE USP14^ENSG00000101557.15 chr18:180339:+ YES1^ENSG00000176105.14 chr18:756835:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1409:6695:26671 . YES_LDAS 0.0102 GT 1.9219 AG 1.8062 "[""INTRACHROMOSOMAL[chr18:0.51Mb]""]" chr18:180339-chr18:756835 False 0 Read count too low: 1 < 5 FAIL 1
USP11--SETD1A 1 0 1.0 0.0 ONLY_REF_SPLICE USP11^ENSG00000102226.10 chrX:47233219:+ SETD1A^ENSG00000099381.18 chr16:30979145:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2205:22341:14172 . YES_LDAS 0.0102 GT 1.7465 AG 1.7819 "[""INTERCHROMOSOMAL[chrX--chr16]""]" chrX:47233219-chr16:30979145 False 0 Read count too low: 1 < 5 FAIL 1
USF1--UBE2L6 1 0 1.0 0.0 INCL_NON_REF_SPLICE USF1^ENSG00000158773.14 chr1:161042641:- UBE2L6^ENSG00000156587.16 chr11:57551911:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1455:48593:4181 . YES_LDAS 0.0102 GT 1.5656 AG 1.8892 "[""INTERCHROMOSOMAL[chr1--chr11]""]" chr1:161042641-chr11:57551911 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
USB1--SGSM3 1 0 1.0 0.0 ONLY_REF_SPLICE USB1^ENSG00000103005.12 chr16:58002645:+ SGSM3^ENSG00000100359.21 chr22:40400696:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1164:48796:24260 . YES_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTERCHROMOSOMAL[chr16--chr22]""]" chr16:58002645-chr22:40400696 False 0 Read count too low: 1 < 5 FAIL 1
USB1--MYO7B 1 0 1.0 0.0 INCL_NON_REF_SPLICE USB1^ENSG00000103005.12 chr16:58010039:+ MYO7B^ENSG00000169994.18 chr2:127632310:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2481:43206:25395 . NO_LDAS 0.0102 GT 1.9219 AG 1.7819 "[""INTERCHROMOSOMAL[chr16--chr2]""]" chr16:58010039-chr2:127632310 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
URB1--GABPA 1 0 1.0 0.0 ONLY_REF_SPLICE URB1^ENSG00000142207.7 chr21:32378445:- GABPA^ENSG00000154727.11 chr21:25758010:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1474:3443:7754 . YES_LDAS 0.0102 GT 1.5656 AG 1.9899 "[""INTRACHROMOSOMAL[chr21:6.54Mb]""]" chr21:32378445-chr21:25758010 False 0 Read count too low: 1 < 5 FAIL 1
UQCRH--ATG2B 1 0 1.0 0.0 INCL_NON_REF_SPLICE UQCRH^ENSG00000173660.12 chr1:46303820:+ ATG2B^ENSG00000066739.12 chr14:96322644:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2296:47809:27287 . NO_LDAS 0.0102 GT 1.7968 AG 0.9968 "[""INTERCHROMOSOMAL[chr1--chr14]""]" chr1:46303820-chr14:96322644 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
UQCRH--AC005740.5 1 0 1.0 0.0 INCL_NON_REF_SPLICE UQCRH^ENSG00000173660.12 chr1:46303820:+ AC005740.5^ENSG00000287726.1 chr5:141906695:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2422:45568:6114 . NO_LDAS 0.0102 GT 1.7968 AG 0.971 "[""INTERCHROMOSOMAL[chr1--chr5]""]" chr1:46303820-chr5:141906695 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
UQCRC2--WDR59 1 0 1.0 0.0 ONLY_REF_SPLICE UQCRC2^ENSG00000140740.11 chr16:21976243:+ WDR59^ENSG00000103091.15 chr16:74885795:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2106:12925:26138 . YES_LDAS 0.0102 GT 1.9656 AG 1.6402 "[""INTRACHROMOSOMAL[chr16:52.89Mb]""]" chr16:21976243-chr16:74885795 False 0 Read count too low: 1 < 5 FAIL 1
UQCC1--HNRNPDL 1 0 1.0 0.0 INCL_NON_REF_SPLICE UQCC1^ENSG00000101019.22 chr20:35392036:- HNRNPDL^ENSG00000152795.18 chr4:82429547:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1201:10441:26040 . YES_LDAS 0.0102 GT 1.8062 AG 1.5628 "[""INTERCHROMOSOMAL[chr20--chr4]""]" chr20:35392036-chr4:82429547 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
UNK--RAB5IF 1 0 1.0 0.0 ONLY_REF_SPLICE UNK^ENSG00000132478.10 chr17:75784984:+ RAB5IF^ENSG00000101084.18 chr20:36607715:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1332:4058:15657 . NO_LDAS 0.0102 GT 1.6895 AG 1.5058 "[""INTERCHROMOSOMAL[chr17--chr20]""]" chr17:75784984-chr20:36607715 False 0 Read count too low: 1 < 5 FAIL 1
UMAD1--PHF14 1 0 1.0 0.0 ONLY_REF_SPLICE UMAD1^ENSG00000219545.11 chr7:7673453:+ PHF14^ENSG00000106443.17 chr7:11111350:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2182:27835:29571 . YES_LDAS 0.0102 GT 1.8295 AG 1.8062 "[""INTRACHROMOSOMAL[chr7:3.01Mb]""]" chr7:7673453-chr7:11111350 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
UMAD1--GLCCI1 1 0 1.0 0.0 ONLY_REF_SPLICE UMAD1^ENSG00000219545.11 chr7:7673453:+ GLCCI1^ENSG00000106415.13 chr7:8003908:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2358:12876:2878 . YES_LDAS 0.0102 GT 1.8295 AG 1.7465 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS[776]""]" chr7:7673453-chr7:8003908 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
UHRF1BP1L--ANKS1B 1 0 1.0 0.0 INCL_NON_REF_SPLICE UHRF1BP1L^ENSG00000111647.13 chr12:100028537:- ANKS1B^ENSG00000185046.18 chr12:99825389:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1384:43982:11860 . YES_LDAS 0.0102 GT 1.5058 AG 1.8323 "[""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr12:0.04Mb]"",""NEIGHBORS[43801]""]" chr12:100028537-chr12:99825389 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
UHMK1--LRP1B 1 0 1.0 0.0 INCL_NON_REF_SPLICE UHMK1^ENSG00000152332.16 chr1:162512823:+ LRP1B^ENSG00000168702.18 chr2:140886185:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1471:20100:18445 . NO_LDAS 0.0102 GT 1.3996 AG 1.8062 "[""INTERCHROMOSOMAL[chr1--chr2]""]" chr1:162512823-chr2:140886185 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
UGP2--COG3 1 0 1.0 0.0 ONLY_REF_SPLICE UGP2^ENSG00000169764.16 chr2:63857936:+ COG3^ENSG00000136152.15 chr13:45524976:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2254:45382:7249 . YES_LDAS 0.0102 GT 1.9219 AG 1.9086 "[""INTERCHROMOSOMAL[chr2--chr13]""]" chr2:63857936-chr13:45524976 False 0 Read count too low: 1 < 5 FAIL 1
UGGT2--GNPTG 1 0 1.0 0.0 ONLY_REF_SPLICE UGGT2^ENSG00000102595.20 chr13:96031889:- GNPTG^ENSG00000090581.10 chr16:1357700:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1114:9381:18011 . YES_LDAS 0.0102 GT 1.7968 AG 1.9656 "[""INTERCHROMOSOMAL[chr13--chr16]""]" chr13:96031889-chr16:1357700 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
UBXN4--KYNU 1 0 1.0 0.0 ONLY_REF_SPLICE UBXN4^ENSG00000144224.17 chr2:135742011:+ KYNU^ENSG00000115919.15 chr2:143029627:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1214:8661:29487 . YES_LDAS 0.0102 GT 1.6895 AG 1.5219 "[""INTRACHROMOSOMAL[chr2:7.09Mb]""]" chr2:135742011-chr2:143029627 False 0 Read count too low: 1 < 5 FAIL 1
UBR5--ZNF706 1 0 1.0 0.0 ONLY_REF_SPLICE UBR5^ENSG00000104517.13 chr8:102412173:- ZNF706^ENSG00000120963.12 chr8:101201743:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1136:35091:14732 . NO_LDAS 0.0102 GT 1.9086 AG 1.9656 "[""INTRACHROMOSOMAL[chr8:1.05Mb]""]" chr8:102412173-chr8:101201743 False 0 Read count too low: 1 < 5 FAIL 1
UBQLN1--RNPC3 1 0 1.0 0.0 INCL_NON_REF_SPLICE UBQLN1^ENSG00000135018.14 chr9:83682945:- RNPC3^ENSG00000185946.16 chr1:103545201:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2274:5822:20982 . NO_LDAS 0.0102 GT 1.5058 AG 1.7465 "[""INTERCHROMOSOMAL[chr9--chr1]""]" chr9:83682945-chr1:103545201 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
UBFD1--TP53BP1 1 0 1.0 0.0 INCL_NON_REF_SPLICE UBFD1^ENSG00000103353.16 chr16:23567024:+ TP53BP1^ENSG00000067369.14 chr15:43404691:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1330:22811:1673 . YES_LDAS 0.0102 GT 1.8295 AG 1.9329 "[""INTERCHROMOSOMAL[chr16--chr15]""]" chr16:23567024-chr15:43404691 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
UBE2K--ATM 1 0 1.0 0.0 ONLY_REF_SPLICE UBE2K^ENSG00000078140.14 chr4:39698390:+ ATM^ENSG00000149311.19 chr11:108343222:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1431:42688:24246 . YES_LDAS 0.0102 GT 1.6895 AG 1.5219 "[""INTERCHROMOSOMAL[chr4--chr11]""]" chr4:39698390-chr11:108343222 False 0 Read count too low: 1 < 5 FAIL 1
UBE2G1--CRLF3 1 0 1.0 0.0 ONLY_REF_SPLICE UBE2G1^ENSG00000132388.12 chr17:4366271:- CRLF3^ENSG00000176390.12 chr17:30786031:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1103:28911:20533 . YES_LDAS 0.0102 GT 1.7819 AG 1.8062 "[""INTRACHROMOSOMAL[chr17:26.40Mb]""]" chr17:4366271-chr17:30786031 False 0 Read count too low: 1 < 5 FAIL 1
UBE2E3--SFMBT2 1 0 1.0 0.0 ONLY_REF_SPLICE UBE2E3^ENSG00000170035.16 chr2:180984093:+ SFMBT2^ENSG00000198879.12 chr10:7176165:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1491:34355:15082 . YES_LDAS 0.0102 GT 1.9086 AG 1.6729 "[""INTERCHROMOSOMAL[chr2--chr10]""]" chr2:180984093-chr10:7176165 False 0 Read count too low: 1 < 5 FAIL 1
UBE2E2--AC010149.1 1 0 1.0 0.0 ONLY_REF_SPLICE UBE2E2^ENSG00000182247.10 chr3:23217312:+ AC010149.1^ENSG00000235419.5 chr2:230551101:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2156:16881:5106 . YES_LDAS 0.0102 GT 1.8892 AG 1.6895 "[""INTERCHROMOSOMAL[chr3--chr2]""]" chr3:23217312-chr2:230551101 False 0 Read count too low: 1 < 5 FAIL 1
UBE2E1--UBE2E2 1 0 1.0 0.0 ONLY_REF_SPLICE UBE2E1^ENSG00000170142.12 chr3:23811510:+ UBE2E2^ENSG00000182247.10 chr3:23208692:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1259:36022:28842 . YES_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr3:0.21Mb]""]" chr3:23811510-chr3:23208692 False 0 Excluded annotation pattern: DGD_PARALOGS FAIL 1
UBE2D1--INPP5D 1 0 1.0 0.0 ONLY_REF_SPLICE UBE2D1^ENSG00000072401.15 chr10:58335225:+ INPP5D^ENSG00000168918.14 chr2:233079335:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1464:6865:20239 . YES_LDAS 0.0102 GT 1.6402 AG 1.9086 "[""INTERCHROMOSOMAL[chr10--chr2]""]" chr10:58335225-chr2:233079335 False 0 Read count too low: 1 < 5 FAIL 1
UBAP1--NFIC 1 0 1.0 0.0 ONLY_REF_SPLICE UBAP1^ENSG00000165006.14 chr9:34179240:+ NFIC^ENSG00000141905.19 chr19:3381712:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1119:8152:6213 . YES_LDAS 0.0102 GT 1.9329 AG 1.9656 "[""INTERCHROMOSOMAL[chr9--chr19]""]" chr9:34179240-chr19:3381712 False 0 Read count too low: 1 < 5 FAIL 1
UBAP1--CREM 1 0 1.0 0.0 ONLY_REF_SPLICE UBAP1^ENSG00000165006.14 chr9:34179240:+ CREM^ENSG00000095794.19 chr10:35206895:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1435:11922:4643 . YES_LDAS 0.0102 GT 1.9329 AG 1.9656 "[""INTERCHROMOSOMAL[chr9--chr10]""]" chr9:34179240-chr10:35206895 False 0 Read count too low: 1 < 5 FAIL 1
UBAC2--RASA3 1 0 1.0 0.0 ONLY_REF_SPLICE UBAC2^ENSG00000134882.16 chr13:99238554:+ RASA3^ENSG00000185989.11 chr13:114041094:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1439:1744:9015 . YES_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTRACHROMOSOMAL[chr13:14.59Mb]""]" chr13:99238554-chr13:114041094 False 0 Read count too low: 1 < 5 FAIL 1
UBA7--DNAJB2 1 0 1.0 0.0 ONLY_REF_SPLICE UBA7^ENSG00000182179.13 chr3:49805897:- DNAJB2^ENSG00000135924.16 chr2:219285987:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1163:33918:16035 . YES_LDAS 0.0102 GT 1.7232 AG 1.8323 "[""INTERCHROMOSOMAL[chr3--chr2]""]" chr3:49805897-chr2:219285987 False 0 Read count too low: 1 < 5 FAIL 1
UBA6-AS1--EIF3E 1 0 1.0 0.0 ONLY_REF_SPLICE UBA6-AS1^ENSG00000248049.7 chr4:67701484:+ EIF3E^ENSG00000104408.11 chr8:108229195:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2282:1906:17114 . YES_LDAS 0.0102 GT 1.8295 AG 1.9656 "[""INTERCHROMOSOMAL[chr4--chr8]""]" chr4:67701484-chr8:108229195 False 0 Read count too low: 1 < 5 FAIL 1
U2AF2--MGLL 1 0 1.0 0.0 INCL_NON_REF_SPLICE U2AF2^ENSG00000063244.13 chr19:55669169:+ MGLL^ENSG00000074416.14 chr3:127690334:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1193:14543:8539 . NO_LDAS 0.0102 GT 1.9329 AG 1.6402 "[""INTERCHROMOSOMAL[chr19--chr3]""]" chr19:55669169-chr3:127690334 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
U2--ZMAT3 1 0 1.0 0.0 INCL_NON_REF_SPLICE U2^ENSG00000274452.1 chr17:43290255:- ZMAT3^ENSG00000172667.11 chr3:179004184:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1219:51635:20099 . YES_LDAS 0.0102 GT 1.4295 AG 1.9219 "[""INTERCHROMOSOMAL[chr17--chr3]""]" chr17:43290255-chr3:179004184 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TYW1--DAZL 1 0 0.5 0.0 INCL_NON_REF_SPLICE TYW1^ENSG00000198874.13 chr7:67098643:+ DAZL^ENSG00000092345.14 chr3:16593695:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1122:21646:20365 . NO_LDAS 0.0051 GT 1.7819 AG 1.9329 "[""INTERCHROMOSOMAL[chr7--chr3]""]" chr7:67098643-chr3:16593695 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TYW1--CALN1 1 0 0.5 0.0 ONLY_REF_SPLICE TYW1^ENSG00000198874.13 chr7:67195337:+ CALN1^ENSG00000183166.11 chr7:72278810:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1117:12286:17156 . YES_LDAS 0.0051 GT 1.6729 AG 1.9086 "[""INTRACHROMOSOMAL[chr7:4.54Mb]""]" chr7:67195337-chr7:72278810 False 0 Read count too low: 1 < 5 FAIL 1
TXNL1--DAPK1 1 0 1.0 0.0 ONLY_REF_SPLICE TXNL1^ENSG00000091164.13 chr18:56638343:- DAPK1^ENSG00000196730.13 chr9:87604954:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1359:8969:7039 . YES_LDAS 0.0102 GT 1.9656 AG 1.8323 "[""INTERCHROMOSOMAL[chr18--chr9]""]" chr18:56638343-chr9:87604954 False 0 Read count too low: 1 < 5 FAIL 1
TXN2--PRR7 1 0 1.0 0.0 INCL_NON_REF_SPLICE TXN2^ENSG00000100348.10 chr22:36480571:- PRR7^ENSG00000131188.12 chr5:177446569:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2432:21969:18599 . NO_LDAS 0.0102 GT 1.9656 AG 1.6729 "[""INTERCHROMOSOMAL[chr22--chr5]""]" chr22:36480571-chr5:177446569 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TXLNGY--PSMD3 1 0 1.0 0.0 ONLY_REF_SPLICE TXLNGY^ENSG00000131002.12 chrY:19587507:+ PSMD3^ENSG00000108344.15 chr17:39996183:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1447:12593:7992 . YES_LDAS 0.0102 GT 1.6729 AG 1.8892 "[""INTERCHROMOSOMAL[chrY--chr17]""]" chrY:19587507-chr17:39996183 False 0 Read count too low: 1 < 5 FAIL 1
TUT7--RBBP6 1 0 1.0 0.0 ONLY_REF_SPLICE TUT7^ENSG00000083223.18 chr9:86343075:- RBBP6^ENSG00000122257.20 chr16:24563423:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2452:47388:22467 . YES_LDAS 0.0102 GT 1.9086 AG 1.9329 "[""INTERCHROMOSOMAL[chr9--chr16]""]" chr9:86343075-chr16:24563423 False 0 Read count too low: 1 < 5 FAIL 1
TULP4--KLC1 1 0 1.0 0.0 ONLY_REF_SPLICE TULP4^ENSG00000130338.13 chr6:158314268:+ KLC1^ENSG00000126214.21 chr14:103700655:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1139:3136:14536 . YES_LDAS 0.0102 GT 1.8256 AG 1.7819 "[""INTERCHROMOSOMAL[chr6--chr14]""]" chr6:158314268-chr14:103700655 False 0 Read count too low: 1 < 5 FAIL 1
TUBGCP6--LIMK1 1 0 1.0 0.0 INCL_NON_REF_SPLICE TUBGCP6^ENSG00000128159.12 chr22:50244343:- LIMK1^ENSG00000106683.15 chr7:74111653:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1483:51465:12042 . NO_LDAS 0.0102 GT 1.8256 AG 1.9329 "[""INTERCHROMOSOMAL[chr22--chr7]""]" chr22:50244343-chr7:74111653 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TUBGCP2--FAM126B 1 0 1.0 0.0 ONLY_REF_SPLICE TUBGCP2^ENSG00000130640.14 chr10:133297321:- FAM126B^ENSG00000155744.9 chr2:201022932:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1328:49378:12798 . NO_LDAS 0.0102 GT 1.5546 AG 1.9329 "[""INTERCHROMOSOMAL[chr10--chr2]""]" chr10:133297321-chr2:201022932 False 0 Read count too low: 1 < 5 FAIL 1
TUBB6--TCP1 1 0 1.0 0.0 ONLY_REF_SPLICE TUBB6^ENSG00000176014.13 chr18:12311053:+ TCP1^ENSG00000120438.12 chr6:159788143:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1305:41766:1490 . NO_LDAS 0.0102 GT 1.8062 AG 1.8892 "[""INTERCHROMOSOMAL[chr18--chr6]""]" chr18:12311053-chr6:159788143 False 0 Read count too low: 1 < 5 FAIL 1
TTYH3--MRM2 1 0 1.0 0.0 ONLY_REF_SPLICE TTYH3^ENSG00000136295.15 chr7:2649988:+ MRM2^ENSG00000122687.19 chr7:2235564:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1192:42607:12028 . YES_LDAS 0.0102 GT 1.5546 AG 1.7968 "[""INTRACHROMOSOMAL[chr7:0.39Mb]""]" chr7:2649988-chr7:2235564 False 0 Read count too low: 1 < 5 FAIL 1
TTLL4--PABPN1P2 1 0 1.0 0.0 INCL_NON_REF_SPLICE TTLL4^ENSG00000135912.11 chr2:218746296:+ PABPN1P2^ENSG00000255875.2 chr19:52809994:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2198:27163:2289 . NO_LDAS 0.0102 GT 1.3383 AG 1.8892 "[""INTERCHROMOSOMAL[chr2--chr19]""]" chr2:218746296-chr19:52809994 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TTLL12--ADRA1D 1 0 1.0 0.0 INCL_NON_REF_SPLICE TTLL12^ENSG00000100304.13 chr22:43174209:- ADRA1D^ENSG00000171873.8 chr20:4248775:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1189:42469:24933 . NO_LDAS 0.0102 GT 1.6402 AG 1.5656 "[""INTERCHROMOSOMAL[chr22--chr20]""]" chr22:43174209-chr20:4248775 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TTC3--FADS2 1 0 1.0 0.0 ONLY_REF_SPLICE TTC3^ENSG00000182670.13 chr21:37073473:+ FADS2^ENSG00000134824.14 chr11:61857011:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2434:46458:27161 . YES_LDAS 0.0102 GT 1.5058 AG 1.6895 "[""INTERCHROMOSOMAL[chr21--chr11]""]" chr21:37073473-chr11:61857011 False 0 Read count too low: 1 < 5 FAIL 1
TTC21B--PAXIP1-DT 1 0 1.0 0.0 INCL_NON_REF_SPLICE TTC21B^ENSG00000123607.16 chr2:165929657:- PAXIP1-DT^ENSG00000273344.1 chr7:155004622:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2264:1485:23952 . NO_LDAS 0.0102 AT 1.9219 AC 1.9899 "[""INTERCHROMOSOMAL[chr2--chr7]""]" chr2:165929657-chr7:155004622 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TTBK2--TMEM44 1 0 1.0 0.0 ONLY_REF_SPLICE TTBK2^ENSG00000128881.17 chr15:42811688:- TMEM44^ENSG00000145014.18 chr3:194611020:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1479:19235:23420 . YES_LDAS 0.0102 GT 1.3753 AG 1.5219 "[""INTERCHROMOSOMAL[chr15--chr3]""]" chr15:42811688-chr3:194611020 False 0 Read count too low: 1 < 5 FAIL 1
TSTD3--PBX3 1 0 1.0 0.0 ONLY_REF_SPLICE TSTD3^ENSG00000279170.3 chr6:99531790:+ PBX3^ENSG00000167081.18 chr9:125748550:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1220:31135:1406 . YES_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTERCHROMOSOMAL[chr6--chr9]""]" chr6:99531790-chr9:125748550 False 0 Read count too low: 1 < 5 FAIL 1
TSN--AC002075.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE TSN^ENSG00000211460.12 chr2:121757261:+ AC002075.1^ENSG00000225898.1 chr7:93778020:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2114:50705:21402 . NO_LDAS 0.0102 GT 1.7465 AG 1.8892 "[""INTERCHROMOSOMAL[chr2--chr7]""]" chr2:121757261-chr7:93778020 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TSFM--STX2 1 0 1.0 0.0 ONLY_REF_SPLICE TSFM^ENSG00000123297.20 chr12:57793073:+ STX2^ENSG00000111450.14 chr12:130821788:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2124:20100:9533 . YES_LDAS 0.0102 GT 1.8892 AG 1.5058 "[""INTRACHROMOSOMAL[chr12:72.98Mb]""]" chr12:57793073-chr12:130821788 False 0 Read count too low: 1 < 5 FAIL 1
TRPV2--ADAD2 1 0 1.0 0.0 INCL_NON_REF_SPLICE TRPV2^ENSG00000187688.15 chr17:16423629:+ ADAD2^ENSG00000140955.11 chr16:84194901:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2101:46134:14382 . NO_LDAS 0.0102 AT 1.8892 AC 1.2419 "[""INTERCHROMOSOMAL[chr17--chr16]""]" chr17:16423629-chr16:84194901 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TRPS1--PTDSS1 1 0 1.0 0.0 ONLY_REF_SPLICE TRPS1^ENSG00000104447.13 chr8:115668545:- PTDSS1^ENSG00000156471.13 chr8:96273299:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1321:48254:2219 . YES_LDAS 0.0102 GT 1.8295 AG 1.9329 "[""INTRACHROMOSOMAL[chr8:19.07Mb]""]" chr8:115668545-chr8:96273299 False 0 Read count too low: 1 < 5 FAIL 1
TRPC4AP--IQCN 1 0 1.0 0.0 INCL_NON_REF_SPLICE TRPC4AP^ENSG00000100991.12 chr20:35008664:- IQCN^ENSG00000130518.17 chr19:18258569:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2105:33125:25872 . NO_LDAS 0.0102 GT 1.9656 AG 1.8892 "[""INTERCHROMOSOMAL[chr20--chr19]""]" chr20:35008664-chr19:18258569 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TRPC4AP--ASAH2 1 0 1.0 0.0 INCL_NON_REF_SPLICE TRPC4AP^ENSG00000100991.12 chr20:35049866:- ASAH2^ENSG00000188611.16 chr10:50248537:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2415:37494:22817 . NO_LDAS 0.0102 GT 1.585 AG 1.7465 "[""INTERCHROMOSOMAL[chr20--chr10]""]" chr20:35049866-chr10:50248537 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TROAP--RAD54L 1 0 1.0 0.0 ONLY_REF_SPLICE TROAP^ENSG00000135451.13 chr12:49324037:+ RAD54L^ENSG00000085999.13 chr1:46273355:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1342:6849:2920 . YES_LDAS 0.0102 GT 1.6729 AG 1.8256 "[""INTERCHROMOSOMAL[chr12--chr1]""]" chr12:49324037-chr1:46273355 False 0 Read count too low: 1 < 5 FAIL 1
TRNT1--BAZ1A 1 0 1.0 0.0 ONLY_REF_SPLICE TRNT1^ENSG00000072756.17 chr3:3140648:+ BAZ1A^ENSG00000198604.11 chr14:34862322:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2496:14858:11607 . YES_LDAS 0.0102 GT 1.5546 AG 1.8295 "[""INTERCHROMOSOMAL[chr3--chr14]""]" chr3:3140648-chr14:34862322 False 0 Read count too low: 1 < 5 FAIL 1
TRMT61B--UPP1 1 0 1.0 0.0 ONLY_REF_SPLICE TRMT61B^ENSG00000171103.11 chr2:28865017:- UPP1^ENSG00000183696.14 chr7:48107361:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1110:32090:22060 . YES_LDAS 0.0102 GT 1.9086 AG 1.7968 "[""INTERCHROMOSOMAL[chr2--chr7]""]" chr2:28865017-chr7:48107361 False 0 Read count too low: 1 < 5 FAIL 1
TRMT61B--PPP1CB 1 0 1.0 0.0 ONLY_REF_SPLICE TRMT61B^ENSG00000171103.11 chr2:28869579:- PPP1CB^ENSG00000213639.10 chr2:28783907:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2203:36289:20645 . YES_LDAS 0.0102 GT 1.7465 AG 1.9656 "[""INTRACHROMOSOMAL[chr2:0.05Mb]"",""LOCAL_INVERSION:-:+:[46881]""]" chr2:28869579-chr2:28783907 False 0 Read count too low: 1 < 5 FAIL 1
TRIM71--RIMKLB 1 0 1.0 0.0 INCL_NON_REF_SPLICE TRIM71^ENSG00000206557.6 chr3:32818932:+ RIMKLB^ENSG00000166532.16 chr12:8713815:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2143:6922:5400 . YES_LDAS 0.0102 GT 1.5656 AG 1.8892 "[""INTERCHROMOSOMAL[chr3--chr12]""]" chr3:32818932-chr12:8713815 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TRIM52-AS1--RACK1 1 0 1.0 0.0 ONLY_REF_SPLICE TRIM52-AS1^ENSG00000248275.2 chr5:181261384:+ RACK1^ENSG00000204628.12 chr5:181242345:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1191:4681:4125 . YES_LDAS 0.0102 GT 1.9656 AG 1.7465 "[""INTRACHROMOSOMAL[chr5:0.01Mb]"",""LOCAL_INVERSION:+:-:[13073]""]" chr5:181261384-chr5:181242345 False 0 Read count too low: 1 < 5 FAIL 1
TRIM52--SORL1 1 0 1.0 0.0 ONLY_REF_SPLICE TRIM52^ENSG00000183718.5 chr5:181260001:- SORL1^ENSG00000137642.13 chr11:121612736:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1245:45430:12714 . YES_LDAS 0.0102 GT 1.8892 AG 1.7819 "[""INTERCHROMOSOMAL[chr5--chr11]""]" chr5:181260001-chr11:121612736 False 0 Read count too low: 1 < 5 FAIL 1
TRIM52--SHLD2 1 0 1.0 0.0 INCL_NON_REF_SPLICE TRIM52^ENSG00000183718.5 chr5:181260001:- SHLD2^ENSG00000122376.12 chr10:87094336:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1135:7213:4475 . YES_LDAS 0.0102 GT 1.8892 AG 1.371 "[""INTERCHROMOSOMAL[chr5--chr10]""]" chr5:181260001-chr10:87094336 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TRIM52--RBPJ 1 0 1.0 0.0 ONLY_REF_SPLICE TRIM52^ENSG00000183718.5 chr5:181260001:- RBPJ^ENSG00000168214.21 chr4:26429898:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1175:5061:20365 . YES_LDAS 0.0102 GT 1.8892 AG 1.8295 "[""INTERCHROMOSOMAL[chr5--chr4]""]" chr5:181260001-chr4:26429898 False 0 Read count too low: 1 < 5 FAIL 1
TRIM52--BRIP1 1 0 1.0 0.0 ONLY_REF_SPLICE TRIM52^ENSG00000183718.5 chr5:181260001:- BRIP1^ENSG00000136492.9 chr17:61847220:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1481:25763:24667 . YES_LDAS 0.0102 GT 1.8892 AG 1.7968 "[""INTERCHROMOSOMAL[chr5--chr17]""]" chr5:181260001-chr17:61847220 False 0 Read count too low: 1 < 5 FAIL 1
TRIM24--LUC7L2 1 0 1.0 0.0 ONLY_REF_SPLICE TRIM24^ENSG00000122779.18 chr7:138460912:+ LUC7L2^ENSG00000146963.18 chr7:139412551:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1461:30763:26180 . YES_LDAS 0.0102 GT 1.8295 AG 1.8892 "[""INTRACHROMOSOMAL[chr7:0.75Mb]""]" chr7:138460912-chr7:139412551 False 0 Read count too low: 1 < 5 FAIL 1
TRIAP1--NFIX 1 0 1.0 0.0 INCL_NON_REF_SPLICE TRIAP1^ENSG00000170855.4 chr12:120446226:- NFIX^ENSG00000008441.18 chr19:13094937:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2276:20392:5050 . NO_LDAS 0.0102 GT 1.9656 AG 1.4716 "[""INTERCHROMOSOMAL[chr12--chr19]""]" chr12:120446226-chr19:13094937 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TRAPPC6A--DCTD 1 0 1.0 0.0 ONLY_REF_SPLICE TRAPPC6A^ENSG00000007255.10 chr19:45178093:- DCTD^ENSG00000129187.15 chr4:182915575:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2239:23159:2808 . YES_LDAS 0.0102 GT 1.5058 AG 1.8892 "[""INTERCHROMOSOMAL[chr19--chr4]""]" chr19:45178093-chr4:182915575 False 0 Read count too low: 1 < 5 FAIL 1
TRAPPC10--ZBTB24 1 0 1.0 0.0 ONLY_REF_SPLICE TRAPPC10^ENSG00000160218.13 chr21:44063785:+ ZBTB24^ENSG00000112365.5 chr6:109467734:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2464:40010:22383 . YES_LDAS 0.0102 GT 1.9656 AG 1.9329 "[""INTERCHROMOSOMAL[chr21--chr6]""]" chr21:44063785-chr6:109467734 False 0 Read count too low: 1 < 5 FAIL 1
TRAPPC10--EIF4B 1 0 0.2 0.0 ONLY_REF_SPLICE TRAPPC10^ENSG00000160218.13 chr21:44032172:+ EIF4B^ENSG00000063046.18 chr12:53038356:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1403:32923:16021 . YES_LDAS 0.002 GT 1.4295 AG 1.4566 "[""INTERCHROMOSOMAL[chr21--chr12]""]" chr21:44032172-chr12:53038356 False 0 Read count too low: 1 < 5 FAIL 1
TRAPPC10--AC073254.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE TRAPPC10^ENSG00000160218.13 chr21:44075153:+ AC073254.1^ENSG00000237126.8 chr2:232584769:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1226:30529:9015 . NO_LDAS 0.0102 GT 1.5301 AG 1.8323 "[""INTERCHROMOSOMAL[chr21--chr2]""]" chr21:44075153-chr2:232584769 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TRAF4--TMEM161B-AS1 1 0 1.0 0.0 INCL_NON_REF_SPLICE TRAF4^ENSG00000076604.15 chr17:28748983:+ TMEM161B-AS1^ENSG00000247828.8 chr5:88285225:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1342:13127:28450 . NO_LDAS 0.0102 GT 1.7465 AG 1.8062 "[""INTERCHROMOSOMAL[chr17--chr5]""]" chr17:28748983-chr5:88285225 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TRAF4--SF3B1 1 0 1.0 0.0 ONLY_REF_SPLICE TRAF4^ENSG00000076604.15 chr17:28747264:+ SF3B1^ENSG00000115524.17 chr2:197418588:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1280:51465:1112 . YES_LDAS 0.0102 GT 1.9899 AG 1.8256 "[""INTERCHROMOSOMAL[chr17--chr2]""]" chr17:28747264-chr2:197418588 False 0 Read count too low: 1 < 5 FAIL 1
TRAF3--PPP1R13B 1 0 1.0 0.0 ONLY_REF_SPLICE TRAF3^ENSG00000131323.16 chr14:102891417:+ PPP1R13B^ENSG00000088808.18 chr14:103797518:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1401:35439:11719 . YES_LDAS 0.0102 GT 1.8892 AG 1.6895 "[""INTRACHROMOSOMAL[chr14:0.82Mb]""]" chr14:102891417-chr14:103797518 False 0 Read count too low: 1 < 5 FAIL 1
TRAF3--JAML 1 0 1.0 0.0 INCL_NON_REF_SPLICE TRAF3^ENSG00000131323.16 chr14:102897401:+ JAML^ENSG00000160593.19 chr11:118203021:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1103:20335:20141 . NO_LDAS 0.0102 GT 1.8062 AG 1.9086 "[""INTERCHROMOSOMAL[chr14--chr11]""]" chr14:102897401-chr11:118203021 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TRAF1--CCDC115 1 0 1.0 0.0 ONLY_REF_SPLICE TRAF1^ENSG00000056558.11 chr9:120923705:- CCDC115^ENSG00000136710.10 chr2:130339232:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2131:5636:24387 . YES_LDAS 0.0102 GT 1.7819 AG 1.7056 "[""INTERCHROMOSOMAL[chr9--chr2]""]" chr9:120923705-chr2:130339232 False 0 Read count too low: 1 < 5 FAIL 1
TRABD2A--ACADM 1 0 1.0 0.0 INCL_NON_REF_SPLICE TRABD2A^ENSG00000186854.11 chr2:84836700:- ACADM^ENSG00000117054.15 chr1:75749454:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1108:19728:17689 . NO_LDAS 0.0102 GT 1.9329 AG 1.9329 "[""INTERCHROMOSOMAL[chr2--chr1]""]" chr2:84836700-chr1:75749454 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TRA2A--GLCCI1 1 0 1.0 0.0 ONLY_REF_SPLICE TRA2A^ENSG00000164548.11 chr7:23531789:- GLCCI1^ENSG00000106415.13 chr7:8003908:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2245:50155:16133 . YES_LDAS 0.0102 GT 1.9086 AG 1.7465 "[""INTRACHROMOSOMAL[chr7:15.41Mb]""]" chr7:23531789-chr7:8003908 False 0 Read count too low: 1 < 5 FAIL 1
TPTE2--MRPS31P2 1 0 1.0 0.0 ONLY_REF_SPLICE TPTE2^ENSG00000132958.17 chr13:19475573:- MRPS31P2^ENSG00000232894.1 chr13:19570288:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1262:29315:10136 . YES_LDAS 0.0102 GT 1.8295 AG 1.9656 "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[15809]""]" chr13:19475573-chr13:19570288 False 0 Read count too low: 1 < 5 FAIL 1
TPST1--FOXK1 1 0 1.0 0.0 ONLY_REF_SPLICE TPST1^ENSG00000169902.15 chr7:66286709:+ FOXK1^ENSG00000164916.11 chr7:4740838:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1372:20278:18726 . YES_LDAS 0.0102 GT 1.7465 AG 1.8062 "[""INTRACHROMOSOMAL[chr7:61.43Mb]""]" chr7:66286709-chr7:4740838 False 0 Read count too low: 1 < 5 FAIL 1
TPRA1--GBP5 1 0 1.0 0.0 INCL_NON_REF_SPLICE TPRA1^ENSG00000163870.16 chr3:127576617:- GBP5^ENSG00000154451.14 chr1:89269480:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2475:25812:2836 . NO_LDAS 0.0102 GT 1.8892 AG 1.9329 "[""INTERCHROMOSOMAL[chr3--chr1]""]" chr3:127576617-chr1:89269480 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TPD52--AZIN1 1 0 1.0 0.0 ONLY_REF_SPLICE TPD52^ENSG00000076554.15 chr8:80171425:- AZIN1^ENSG00000155096.14 chr8:102858150:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1207:38691:8160 . YES_LDAS 0.0102 GT 1.5656 AG 1.9899 "[""INTRACHROMOSOMAL[chr8:22.60Mb]""]" chr8:80171425-chr8:102858150 False 0 Read count too low: 1 < 5 FAIL 1
TPCN2--POLD4 1 0 1.0 0.0 INCL_NON_REF_SPLICE TPCN2^ENSG00000162341.18 chr11:69063967:+ POLD4^ENSG00000175482.9 chr11:67353432:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2229:48205:4209 . YES_LDAS 0.0102 GT 1.7968 AG 1.4295 "[""INTRACHROMOSOMAL[chr11:1.69Mb]""]" chr11:69063967-chr11:67353432 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TPCN1--STT3B 1 0 1.0 0.0 ONLY_REF_SPLICE TPCN1^ENSG00000186815.13 chr12:113226964:+ STT3B^ENSG00000163527.10 chr3:31615105:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1373:49629:26096 . NO_LDAS 0.0102 GT 1.7968 AG 1.8062 "[""INTERCHROMOSOMAL[chr12--chr3]""]" chr12:113226964-chr3:31615105 False 0 Read count too low: 1 < 5 FAIL 1
TP53BP1--RABEP1 1 0 1.0 0.0 ONLY_REF_SPLICE TP53BP1^ENSG00000067369.14 chr15:43491669:- RABEP1^ENSG00000029725.17 chr17:5308694:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1118:47566:10893 . YES_LDAS 0.0102 GT 1.4566 AG 1.7819 "[""INTERCHROMOSOMAL[chr15--chr17]""]" chr15:43491669-chr17:5308694 False 0 Read count too low: 1 < 5 FAIL 1
TOPBP1--DNAJC13 1 0 1.0 0.0 ONLY_REF_SPLICE TOPBP1^ENSG00000163781.14 chr3:133657798:- DNAJC13^ENSG00000138246.17 chr3:132477789:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1129:8880:21990 . YES_LDAS 0.0102 GT 0.8366 AG 1.8256 "[""INTRACHROMOSOMAL[chr3:1.06Mb]""]" chr3:133657798-chr3:132477789 False 0 Read count too low: 1 < 5 FAIL 1
TOP2B--RABGAP1L 1 0 1.0 0.0 ONLY_REF_SPLICE TOP2B^ENSG00000077097.15 chr3:25664229:- RABGAP1L^ENSG00000152061.23 chr1:174683522:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1495:4163:19342 . YES_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chr3--chr1]""]" chr3:25664229-chr1:174683522 False 0 Read count too low: 1 < 5 FAIL 1
TOP2A--MAST4 1 0 0.5 0.0 INCL_NON_REF_SPLICE TOP2A^ENSG00000131747.15 chr17:40389977:- MAST4^ENSG00000069020.18 chr5:67160554:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1456:23506:29137 . NO_LDAS 0.0051 GT 1.9086 AG 1.7819 "[""INTERCHROMOSOMAL[chr17--chr5]""]" chr17:40389977-chr5:67160554 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TONSL--NKPD1 1 0 1.0 0.0 INCL_NON_REF_SPLICE TONSL^ENSG00000160949.17 chr8:144436230:- NKPD1^ENSG00000179846.10 chr19:45158796:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2357:36167:11215 . NO_LDAS 0.0102 AT 1.7465 AC 1.7819 "[""INTERCHROMOSOMAL[chr8--chr19]""]" chr8:144436230-chr19:45158796 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TOMM70--PTPN1 1 0 1.0 0.0 INCL_NON_REF_SPLICE TOMM70^ENSG00000154174.8 chr3:100400790:- PTPN1^ENSG00000196396.10 chr20:50510405:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1461:23248:14816 . YES_LDAS 0.0102 GT 1.4566 AG 1.6402 "[""INTERCHROMOSOMAL[chr3--chr20]""]" chr3:100400790-chr20:50510405 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TOM1--ZNF7 1 0 1.0 0.0 ONLY_REF_SPLICE TOM1^ENSG00000100284.22 chr22:35338788:+ ZNF7^ENSG00000147789.15 chr8:144829043:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1162:16638:2051 . YES_LDAS 0.0102 GT 1.7819 AG 1.9656 "[""INTERCHROMOSOMAL[chr22--chr8]""]" chr22:35338788-chr8:144829043 False 0 Read count too low: 1 < 5 FAIL 1
TNKS--XKR6 1 0 1.0 0.0 ONLY_REF_SPLICE TNKS^ENSG00000173273.16 chr8:9556612:+ XKR6^ENSG00000171044.11 chr8:11114092:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2307:12116:24176 . YES_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTRACHROMOSOMAL[chr8:1.11Mb]""]" chr8:9556612-chr8:11114092 False 0 Read count too low: 1 < 5 FAIL 1
TNFSF4--AC007663.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE TNFSF4^ENSG00000117586.11 chr1:173186330:- AC007663.1^ENSG00000161132.6 chr22:20303272:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1460:44233:16245 . NO_LDAS 0.0102 GT 1.3996 AG 1.7819 "[""INTERCHROMOSOMAL[chr1--chr22]""]" chr1:173186330-chr22:20303272 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TNFRSF1B--PANK2 1 0 1.0 0.0 ONLY_REF_SPLICE TNFRSF1B^ENSG00000028137.19 chr1:12191085:+ PANK2^ENSG00000125779.23 chr20:3907926:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1291:45730:24162 . YES_LDAS 0.0102 GT 1.8062 AG 1.5546 "[""INTERCHROMOSOMAL[chr1--chr20]""]" chr1:12191085-chr20:3907926 False 0 Read count too low: 1 < 5 FAIL 1
TMX3--CPNE8 1 0 1.0 0.0 ONLY_REF_SPLICE TMX3^ENSG00000166479.10 chr18:68710021:- CPNE8^ENSG00000139117.14 chr12:38776301:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1235:33676:23938 . YES_LDAS 0.0102 GT 1.5058 AG 1.8323 "[""INTERCHROMOSOMAL[chr18--chr12]""]" chr18:68710021-chr12:38776301 False 0 Read count too low: 1 < 5 FAIL 1
TMX1--CDC20 1 0 1.0 0.0 INCL_NON_REF_SPLICE TMX1^ENSG00000139921.13 chr14:51255846:+ CDC20^ENSG00000117399.14 chr1:43359239:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1255:9001:25003 . YES_LDAS 0.0102 GT 1.8323 AG 1.8892 "[""INTERCHROMOSOMAL[chr14--chr1]""]" chr14:51255846-chr1:43359239 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TMTC2--SSR4 1 0 1.0 0.0 ONLY_REF_SPLICE TMTC2^ENSG00000179104.9 chr12:82687669:+ SSR4^ENSG00000180879.14 chrX:153796434:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2263:2569:28800 . YES_LDAS 0.0102 GT 1.9899 AG 1.7056 "[""INTERCHROMOSOMAL[chr12--chrX]""]" chr12:82687669-chrX:153796434 False 0 Read count too low: 1 < 5 FAIL 1
TMSB15B-AS1--CPLANE1 1 0 1.0 0.0 ONLY_REF_SPLICE TMSB15B-AS1^ENSG00000231728.5 chrX:103918087:- CPLANE1^ENSG00000197603.16 chr5:37231049:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2297:14001:13821 . YES_LDAS 0.0102 GT 1.9656 AG 1.8892 "[""INTERCHROMOSOMAL[chrX--chr5]""]" chrX:103918087-chr5:37231049 False 0 Read count too low: 1 < 5 FAIL 1
TMOD1--TDRD7 1 0 1.0 0.0 ONLY_REF_SPLICE TMOD1^ENSG00000136842.14 chr9:97524308:+ TDRD7^ENSG00000196116.8 chr9:97475383:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1493:29841:13737 . NO_LDAS 0.0102 GT 1.9656 AG 1.9656 "[""DEEPEST2019"",""TumorFusionsNAR2018"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr9:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[5055]""]" chr9:97524308-chr9:97475383 False 0 Read count too low: 1 < 5 FAIL 1
TMLHE--CLIC2 1 0 1.0 0.0 ONLY_REF_SPLICE TMLHE^ENSG00000185973.12 chrX:155506898:- CLIC2^ENSG00000155962.13 chrX:155299145:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1416:22948:5190 . YES_LDAS 0.0102 GT 1.8892 AG 1.7465 "[""INTRACHROMOSOMAL[chrX:0.15Mb]""]" chrX:155506898-chrX:155299145 False 0 Read count too low: 1 < 5 FAIL 1
TMEM67--ATAD2 1 0 1.0 0.0 ONLY_REF_SPLICE TMEM67^ENSG00000164953.16 chr8:93816515:+ ATAD2^ENSG00000156802.13 chr8:123336532:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2343:23668:21878 . YES_LDAS 0.0102 GT 1.8892 AG 1.8295 "[""INTRACHROMOSOMAL[chr8:29.50Mb]""]" chr8:93816515-chr8:123336532 False 0 Read count too low: 1 < 5 FAIL 1
TMEM63A--ZYX 1 0 1.0 0.0 ONLY_REF_SPLICE TMEM63A^ENSG00000196187.12 chr1:225862218:- ZYX^ENSG00000159840.16 chr7:143388489:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1329:14397:11089 . YES_LDAS 0.0102 GT 1.9219 AG 1.9656 "[""INTERCHROMOSOMAL[chr1--chr7]""]" chr1:225862218-chr7:143388489 False 0 Read count too low: 1 < 5 FAIL 1
TMEM59--RN7SL767P 1 0 0.25 0.0 INCL_NON_REF_SPLICE TMEM59^ENSG00000116209.12 chr1:54031174:- RN7SL767P^ENSG00000241529.3 chr3:113632754:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2329:46498:16245 . YES_LDAS 0.0026 GT 1.8295 AG 1.8295 "[""INTERCHROMOSOMAL[chr1--chr3]""]" chr1:54031174-chr3:113632754 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TMEM35B--ZMYM6 1 0 1.0 0.0 ONLY_REF_SPLICE TMEM35B^ENSG00000243749.1 chr1:34983767:- ZMYM6^ENSG00000163867.17 chr1:35020467:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1218:45155:6016 . YES_LDAS 0.0102 GT 1.8892 AG 1.7819 "[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[812]""]" chr1:34983767-chr1:35020467 False 0 Read count too low: 1 < 5 FAIL 1
TMEM245--MAN2B2 1 0 1.0 0.0 INCL_NON_REF_SPLICE TMEM245^ENSG00000106771.13 chr9:109108453:- MAN2B2^ENSG00000013288.9 chr4:6614297:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2266:9503:1294 . NO_LDAS 0.0102 GT 1.6049 AG 1.7819 "[""INTERCHROMOSOMAL[chr9--chr4]""]" chr9:109108453-chr4:6614297 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TMEM241--ZMYM4 1 0 1.0 0.0 ONLY_REF_SPLICE TMEM241^ENSG00000134490.14 chr18:23399566:- ZMYM4^ENSG00000146463.12 chr1:35295927:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2227:40342:20435 . YES_LDAS 0.0102 GT 1.9899 AG 1.9219 "[""INTERCHROMOSOMAL[chr18--chr1]""]" chr18:23399566-chr1:35295927 False 0 Read count too low: 1 < 5 FAIL 1
TMEM223--STX5 1 0 1.0 0.0 ONLY_REF_SPLICE TMEM223^ENSG00000168569.8 chr11:62791679:- STX5^ENSG00000162236.13 chr11:62807628:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2480:16096:9884 . YES_LDAS 0.0102 GT 1.7056 AG 1.9086 "[""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr11:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[14854]""]" chr11:62791679-chr11:62807628 False 0 Read count too low: 1 < 5 FAIL 1
TMEM200B--INTS11 1 0 1.0 0.0 INCL_NON_REF_SPLICE TMEM200B^ENSG00000253304.2 chr1:29121581:- INTS11^ENSG00000127054.21 chr1:1315618:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1442:5660:22803 . NO_LDAS 0.0102 GT 1.2729 AG 1.8062 "[""INTRACHROMOSOMAL[chr1:27.79Mb]""]" chr1:29121581-chr1:1315618 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TMEM18--PPP1R12C 1 0 1.0 0.0 ONLY_REF_SPLICE TMEM18^ENSG00000151353.15 chr2:677289:- PPP1R12C^ENSG00000125503.13 chr19:55096335:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1170:36467:25437 . YES_LDAS 0.0102 GT 1.7968 AG 1.7968 "[""INTERCHROMOSOMAL[chr2--chr19]""]" chr2:677289-chr19:55096335 False 0 Read count too low: 1 < 5 FAIL 1
TMEM168--RFX3 1 0 1.0 0.0 INCL_NON_REF_SPLICE TMEM168^ENSG00000146802.13 chr7:112775199:- RFX3^ENSG00000080298.15 chr9:3330426:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2345:29752:3718 . YES_LDAS 0.0102 GT 1.7465 AG 1.9329 "[""INTERCHROMOSOMAL[chr7--chr9]""]" chr7:112775199-chr9:3330426 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TMEM160--CCDC177 1 0 1.0 0.0 INCL_NON_REF_SPLICE TMEM160^ENSG00000130748.7 chr19:47048407:- CCDC177^ENSG00000267909.3 chr14:69570279:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1335:5450:4951 . NO_LDAS 0.0102 GT 1.5656 AG 1.6895 "[""INTERCHROMOSOMAL[chr19--chr14]""]" chr19:47048407-chr14:69570279 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TMEM138--CBL 1 0 1.0 0.0 ONLY_REF_SPLICE TMEM138^ENSG00000149483.12 chr11:61367998:+ CBL^ENSG00000110395.7 chr11:119275997:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1313:51910:16428 . YES_LDAS 0.0102 GT 1.9656 AG 1.7968 "[""INTRACHROMOSOMAL[chr11:57.84Mb]""]" chr11:61367998-chr11:119275997 False 0 Read count too low: 1 < 5 FAIL 1
TMED5--DOCK7 1 0 1.0 0.0 ONLY_REF_SPLICE TMED5^ENSG00000117500.13 chr1:93180054:- DOCK7^ENSG00000116641.18 chr1:62663130:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2316:51142:18880 . YES_LDAS 0.0102 GT 1.8892 AG 1.8062 "[""INTRACHROMOSOMAL[chr1:30.46Mb]""]" chr1:93180054-chr1:62663130 False 0 Read count too low: 1 < 5 FAIL 1
TMCO4--SPATA5 1 0 1.0 0.0 ONLY_REF_SPLICE TMCO4^ENSG00000162542.14 chr1:19746456:- SPATA5^ENSG00000145375.9 chr4:122935714:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1344:8402:12728 . YES_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chr1--chr4]""]" chr1:19746456-chr4:122935714 False 0 Read count too low: 1 < 5 FAIL 1
TMCC1-AS1--VPS8 1 0 1.0 0.0 ONLY_REF_SPLICE TMCC1-AS1^ENSG00000271270.7 chr3:129893927:+ VPS8^ENSG00000156931.16 chr3:185024336:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2281:22147:6661 . YES_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTRACHROMOSOMAL[chr3:54.89Mb]""]" chr3:129893927-chr3:185024336 False 0 Read count too low: 1 < 5 FAIL 1
TMCC1--SEPTIN11 1 0 1.0 0.0 ONLY_REF_SPLICE TMCC1^ENSG00000172765.17 chr3:129827803:- SEPTIN11^ENSG00000138758.12 chr4:76996425:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2487:48901:25227 . YES_LDAS 0.0102 GT 1.6729 AG 1.8892 "[""INTERCHROMOSOMAL[chr3--chr4]""]" chr3:129827803-chr4:76996425 False 0 Read count too low: 1 < 5 FAIL 1
TMC3--CACYBP 1 0 1.0 0.0 INCL_NON_REF_SPLICE TMC3^ENSG00000188869.13 chr15:81356572:- CACYBP^ENSG00000116161.18 chr1:175000061:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2411:45026:7782 . NO_LDAS 0.0102 GT 1.7819 AG 1.7056 "[""INTERCHROMOSOMAL[chr15--chr1]""]" chr15:81356572-chr1:175000061 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TMBIM4--QRSL1 1 0 1.0 0.0 ONLY_REF_SPLICE TMBIM4^ENSG00000155957.18 chr12:66145841:- QRSL1^ENSG00000130348.11 chr6:106662980:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2141:13353:24807 . YES_LDAS 0.0102 GT 1.9086 AG 1.4716 "[""INTERCHROMOSOMAL[chr12--chr6]""]" chr12:66145841-chr6:106662980 False 0 Read count too low: 1 < 5 FAIL 1
TMA7--PTPN22 1 0 1.0 0.0 INCL_NON_REF_SPLICE TMA7^ENSG00000232112.3 chr3:48443878:+ PTPN22^ENSG00000134242.16 chr1:113871624:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1317:27276:5288 . YES_LDAS 0.0102 GT 1.7232 AG 1.7465 "[""INTERCHROMOSOMAL[chr3--chr1]""]" chr3:48443878-chr1:113871624 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TLR7--SLC7A6 1 0 1.0 0.0 INCL_NON_REF_SPLICE TLR7^ENSG00000196664.5 chrX:12889505:+ SLC7A6^ENSG00000103064.15 chr16:68274707:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1466:24332:13415 . YES_LDAS 0.0102 GT 1.8256 AG 1.9219 "[""INTERCHROMOSOMAL[chrX--chr16]""]" chrX:12889505-chr16:68274707 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TLR4--AL160272.1 1 0 1.0 0.0 ONLY_REF_SPLICE TLR4^ENSG00000136869.16 chr9:117704565:+ AL160272.1^ENSG00000284977.2 chr9:117848065:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1212:19623:1673 . YES_LDAS 0.0102 GT 1.7968 AG 1.8892 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr9:0.03Mb]"",""NEIGHBORS[34720]""]" chr9:117704565-chr9:117848065 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
TLK1--STARD7 1 0 1.0 0.0 ONLY_REF_SPLICE TLK1^ENSG00000198586.14 chr2:171160290:- STARD7^ENSG00000084090.14 chr2:96195549:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2105:23846:25942 . YES_LDAS 0.0102 GT 1.4566 AG 1.7056 "[""INTRACHROMOSOMAL[chr2:74.78Mb]""]" chr2:171160290-chr2:96195549 False 0 Read count too low: 1 < 5 FAIL 1
TLK1--PRKDC 1 0 1.0 0.0 ONLY_REF_SPLICE TLK1^ENSG00000198586.14 chr2:170996653:- PRKDC^ENSG00000253729.8 chr8:47785317:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2111:26241:22999 . YES_LDAS 0.0102 GT 1.7819 AG 1.7465 "[""INTERCHROMOSOMAL[chr2--chr8]""]" chr2:170996653-chr8:47785317 False 0 Read count too low: 1 < 5 FAIL 1
TLK1--DYM 1 0 1.0 0.0 ONLY_REF_SPLICE TLK1^ENSG00000198586.14 chr2:171160290:- DYM^ENSG00000141627.14 chr18:49286616:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2413:11614:26222 . YES_LDAS 0.0102 GT 1.4566 AG 1.9656 "[""INTERCHROMOSOMAL[chr2--chr18]""]" chr2:171160290-chr18:49286616 False 0 Read count too low: 1 < 5 FAIL 1
TLE6--NCLN 1 0 1.0 0.0 ONLY_REF_SPLICE TLE6^ENSG00000104953.20 chr19:2980182:+ NCLN^ENSG00000125912.11 chr19:3205939:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2212:46797:14410 . YES_LDAS 0.0102 GT 1.8892 AG 1.8062 "[""INTRACHROMOSOMAL[chr19:0.19Mb]""]" chr19:2980182-chr19:3205939 False 0 Read count too low: 1 < 5 FAIL 1
TIMM13--RANBP1 1 0 1.0 0.0 ONLY_REF_SPLICE TIMM13^ENSG00000099800.8 chr19:2427256:- RANBP1^ENSG00000099901.17 chr22:20119013:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1136:45398:13583 . YES_LDAS 0.0102 GT 1.8256 AG 1.9329 "[""INTERCHROMOSOMAL[chr19--chr22]""]" chr19:2427256-chr22:20119013 False 0 Read count too low: 1 < 5 FAIL 1
TIFAB--URGCP 1 0 1.0 0.0 INCL_NON_REF_SPLICE TIFAB^ENSG00000255833.2 chr5:135449738:- URGCP^ENSG00000106608.17 chr7:43877949:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1120:24566:28955 . NO_LDAS 0.0102 GT 1.7819 AG 1.7819 "[""INTERCHROMOSOMAL[chr5--chr7]""]" chr5:135449738-chr7:43877949 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
THRB-AS1--RNF216 1 0 1.0 0.0 INCL_NON_REF_SPLICE THRB-AS1^ENSG00000228791.8 chr3:24681093:+ RNF216^ENSG00000011275.19 chr7:5623155:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1169:22058:11159 . NO_LDAS 0.0102 AT 1.9656 AC 1.7819 "[""INTERCHROMOSOMAL[chr3--chr7]""]" chr3:24681093-chr7:5623155 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
THOC1--USP14 1 0 1.0 0.0 ONLY_REF_SPLICE THOC1^ENSG00000079134.12 chr18:267966:- USP14^ENSG00000101557.15 chr18:204564:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2449:38699:2990 . YES_LDAS 0.0102 GT 1.8892 AG 1.7968 "[""INTRACHROMOSOMAL[chr18:0.00Mb]"",""NEIGHBORS_OVERLAP:-:+:[109]""]" chr18:267966-chr18:204564 False 0 Read count too low: 1 < 5 FAIL 1
THEMIS2--MFN2 1 0 1.0 0.0 ONLY_REF_SPLICE THEMIS2^ENSG00000130775.16 chr1:27876728:+ MFN2^ENSG00000116688.18 chr1:12011496:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2219:44233:5260 . YES_LDAS 0.0102 GT 1.7232 AG 1.9086 "[""INTRACHROMOSOMAL[chr1:15.86Mb]""]" chr1:27876728-chr1:12011496 False 0 Read count too low: 1 < 5 FAIL 1
THBS3--CFLAR 1 0 1.0 0.0 ONLY_REF_SPLICE THBS3^ENSG00000169231.13 chr1:155207798:- CFLAR^ENSG00000003402.20 chr2:201142645:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2190:33101:27539 . NO_LDAS 0.0102 GT 1.9219 AG 1.8295 "[""INTERCHROMOSOMAL[chr1--chr2]""]" chr1:155207798-chr2:201142645 False 0 Read count too low: 1 < 5 FAIL 1
THADA--TNRC6A 1 0 1.0 0.0 INCL_NON_REF_SPLICE THADA^ENSG00000115970.19 chr2:43577022:- TNRC6A^ENSG00000090905.19 chr16:24809390:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1416:6420:2009 . NO_LDAS 0.0102 GT 1.9329 AG 1.8295 "[""INTERCHROMOSOMAL[chr2--chr16]""]" chr2:43577022-chr16:24809390 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TGOLN2--NIPBL-DT 1 0 1.0 0.0 ONLY_REF_SPLICE TGOLN2^ENSG00000152291.14 chr2:85324915:- NIPBL-DT^ENSG00000285967.1 chr5:36872642:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2201:27948:29459 . NO_LDAS 0.0102 GT 1.9656 AG 1.9656 "[""INTERCHROMOSOMAL[chr2--chr5]""]" chr2:85324915-chr5:36872642 False 0 Read count too low: 1 < 5 FAIL 1
TGIF2--SLC35B2 1 0 1.0 0.0 ONLY_REF_SPLICE TGIF2^ENSG00000118707.11 chr20:36578966:+ SLC35B2^ENSG00000157593.19 chr6:44255644:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2366:4584:25984 . YES_LDAS 0.0102 GT 1.9899 AG 1.8295 "[""INTERCHROMOSOMAL[chr20--chr6]""]" chr20:36578966-chr6:44255644 False 0 Read count too low: 1 < 5 FAIL 1
TGFBR1--ACVR1B 1 0 1.0 0.0 ONLY_REF_SPLICE TGFBR1^ENSG00000106799.13 chr9:99144888:+ ACVR1B^ENSG00000135503.13 chr12:51986818:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2205:14437:7376 . NO_LDAS 0.0102 GT 1.5329 AG 1.9656 "[""INTERCHROMOSOMAL[chr9--chr12]""]" chr9:99144888-chr12:51986818 False 0 Read count too low: 1 < 5 FAIL 1
TFRC--EHMT1 1 0 1.0 0.0 ONLY_REF_SPLICE TFRC^ENSG00000072274.13 chr3:196082043:- EHMT1^ENSG00000181090.21 chr9:137716626:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1391:45325:12616 . YES_LDAS 0.0102 GT 1.8295 AG 1.9899 "[""INTERCHROMOSOMAL[chr3--chr9]""]" chr3:196082043-chr9:137716626 False 0 Read count too low: 1 < 5 FAIL 1
TFAM--MICAL1 1 0 1.0 0.0 INCL_NON_REF_SPLICE TFAM^ENSG00000108064.11 chr10:58396982:+ MICAL1^ENSG00000135596.18 chr6:109444995:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2172:38683:4055 . NO_LDAS 0.0102 GT 1.9656 AG 1.8892 "[""INTERCHROMOSOMAL[chr10--chr6]""]" chr10:58396982-chr6:109444995 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TERF2IP--MTURN 1 0 1.0 0.0 INCL_NON_REF_SPLICE TERF2IP^ENSG00000166848.7 chr16:75647978:+ MTURN^ENSG00000180354.16 chr7:30135014:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2450:51004:22201 . NO_LDAS 0.0102 GT 1.7056 AG 1.231 "[""INTERCHROMOSOMAL[chr16--chr7]""]" chr16:75647978-chr7:30135014 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TEPSIN--GRWD1 1 0 1.0 0.0 INCL_NON_REF_SPLICE TEPSIN^ENSG00000167302.11 chr17:81238957:- GRWD1^ENSG00000105447.13 chr19:48451208:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1306:49945:21094 . NO_LDAS 0.0102 GT 1.231 AG 1.9329 "[""INTERCHROMOSOMAL[chr17--chr19]""]" chr17:81238957-chr19:48451208 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TENT5A--ASCC3 1 0 1.0 0.0 ONLY_REF_SPLICE TENT5A^ENSG00000112773.16 chr6:81751590:- ASCC3^ENSG00000112249.14 chr6:100868038:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1192:36790:5232 . YES_LDAS 0.0102 GT 1.7968 AG 1.6729 "[""INTRACHROMOSOMAL[chr6:18.76Mb]""]" chr6:81751590-chr6:100868038 False 0 Read count too low: 1 < 5 FAIL 1
TCTN3--FBXO4 1 0 1.0 0.0 ONLY_REF_SPLICE TCTN3^ENSG00000119977.22 chr10:95692920:- FBXO4^ENSG00000151876.13 chr5:41927013:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2321:18385:1883 . YES_LDAS 0.0102 GT 1.9329 AG 1.9086 "[""INTERCHROMOSOMAL[chr10--chr5]""]" chr10:95692920-chr5:41927013 False 0 Read count too low: 1 < 5 FAIL 1
TCP1--IGF2R 1 0 1.0 0.0 ONLY_REF_SPLICE TCP1^ENSG00000120438.12 chr6:159789405:- IGF2R^ENSG00000197081.16 chr6:160050473:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2419:3168:14312 . YES_LDAS 0.0102 GT 1.7968 AG 1.9656 "[""INTRACHROMOSOMAL[chr6:0.18Mb]""]" chr6:159789405-chr6:160050473 False 0 Read count too low: 1 < 5 FAIL 1
TCN2--UGCG 1 0 1.0 0.0 INCL_NON_REF_SPLICE TCN2^ENSG00000185339.9 chr22:30614505:+ UGCG^ENSG00000148154.10 chr9:111897187:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2179:26427:1490 . YES_LDAS 0.0102 GT 1.9086 AG 1.2729 "[""INTERCHROMOSOMAL[chr22--chr9]""]" chr22:30614505-chr9:111897187 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TCIRG1--PLK3 1 0 1.0 0.0 ONLY_REF_SPLICE TCIRG1^ENSG00000110719.10 chr11:68045102:+ PLK3^ENSG00000173846.13 chr1:44805266:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1169:49063:5106 . YES_LDAS 0.0102 GT 1.8256 AG 1.8892 "[""INTERCHROMOSOMAL[chr11--chr1]""]" chr11:68045102-chr1:44805266 False 0 Read count too low: 1 < 5 FAIL 1
TCF25--SHFL 1 0 1.0 0.0 ONLY_REF_SPLICE TCF25^ENSG00000141002.20 chr16:89878627:+ SHFL^ENSG00000130813.18 chr19:10089657:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1220:37583:8230 . YES_LDAS 0.0102 GT 1.9656 AG 1.8892 "[""INTERCHROMOSOMAL[chr16--chr19]""]" chr16:89878627-chr19:10089657 False 0 Read count too low: 1 < 5 FAIL 1
TCF12--AC015813.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE TCF12^ENSG00000140262.18 chr15:57273262:+ AC015813.1^ENSG00000264112.1 chr17:57990839:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1491:31232:19482 . NO_LDAS 0.0102 GT 1.7465 AG 1.7465 "[""INTERCHROMOSOMAL[chr15--chr17]""]" chr15:57273262-chr17:57990839 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TBXAS1--HIPK2 1 0 1.0 0.0 ONLY_REF_SPLICE TBXAS1^ENSG00000059377.18 chr7:139962233:+ HIPK2^ENSG00000064393.16 chr7:139620563:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1152:28296:18740 . YES_LDAS 0.0102 GT 1.8295 AG 1.8892 "[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS_OVERLAP:+:-:[947]""]" chr7:139962233-chr7:139620563 False 0 Read count too low: 1 < 5 FAIL 1
TBX4--NAGA 1 0 1.0 0.0 INCL_NON_REF_SPLICE TBX4^ENSG00000121075.11 chr17:61483377:+ NAGA^ENSG00000198951.12 chr22:42065899:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1357:43942:19272 . NO_LDAS 0.0102 GT 1.6402 AG 1.9899 "[""INTERCHROMOSOMAL[chr17--chr22]""]" chr17:61483377-chr22:42065899 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TBCD--FBN1 1 0 0.5 0.0 INCL_NON_REF_SPLICE TBCD^ENSG00000141556.21 chr17:82909307:+ FBN1^ENSG00000166147.14 chr15:48410236:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1326:1146:29417 . NO_LDAS 0.0051 GT 1.9656 AG 1.8295 "[""INTERCHROMOSOMAL[chr17--chr15]""]" chr17:82909307-chr15:48410236 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TBCD--AC117480.1 1 0 0.5 0.0 INCL_NON_REF_SPLICE TBCD^ENSG00000141556.21 chr17:82909307:+ AC117480.1^ENSG00000287143.1 chr3:127845038:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1326:1146:29417 . NO_LDAS 0.0051 GT 1.9656 AG 1.8295 "[""INTERCHROMOSOMAL[chr17--chr3]""]" chr17:82909307-chr3:127845038 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TBCB--ANKRD27 1 0 1.0 0.0 ONLY_REF_SPLICE TBCB^ENSG00000105254.12 chr19:36116184:+ ANKRD27^ENSG00000105186.16 chr19:32631494:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1144:35277:14774 . YES_LDAS 0.0102 GT 1.7968 AG 1.7819 "[""INTRACHROMOSOMAL[chr19:3.44Mb]""]" chr19:36116184-chr19:32631494 False 0 Read count too low: 1 < 5 FAIL 1
TBCA--FAM172A 1 0 1.0 0.0 ONLY_REF_SPLICE TBCA^ENSG00000171530.15 chr5:77776205:- FAM172A^ENSG00000113391.19 chr5:93824267:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1196:43149:19889 . YES_LDAS 0.0102 GT 1.7232 AG 1.9656 "[""INTRACHROMOSOMAL[chr5:15.75Mb]""]" chr5:77776205-chr5:93824267 False 0 Read count too low: 1 < 5 FAIL 1
TBC1D20--LMF1 1 0 1.0 0.0 ONLY_REF_SPLICE TBC1D20^ENSG00000125875.15 chr20:462336:- LMF1^ENSG00000103227.19 chr16:911079:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1471:39055:27427 . NO_LDAS 0.0102 GT 1.4566 AG 1.8892 "[""INTERCHROMOSOMAL[chr20--chr16]""]" chr20:462336-chr16:911079 False 0 Read count too low: 1 < 5 FAIL 1
TBC1D19--ARSG 1 0 1.0 0.0 ONLY_REF_SPLICE TBC1D19^ENSG00000109680.11 chr4:26584292:+ ARSG^ENSG00000141337.13 chr17:68306943:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2448:15643:19468 . NO_LDAS 0.0102 GT 1.7465 AG 1.7232 "[""INTERCHROMOSOMAL[chr4--chr17]""]" chr4:26584292-chr17:68306943 False 0 Read count too low: 1 < 5 FAIL 1
TBC1D14--FURIN 1 0 1.0 0.0 ONLY_REF_SPLICE TBC1D14^ENSG00000132405.19 chr4:6967424:+ FURIN^ENSG00000140564.13 chr15:90875582:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2243:9236:25774 . NO_LDAS 0.0102 GT 1.4716 AG 1.9329 "[""INTERCHROMOSOMAL[chr4--chr15]""]" chr4:6967424-chr15:90875582 False 0 Read count too low: 1 < 5 FAIL 1
TBC1D13--ZER1 1 0 1.0 0.0 ONLY_REF_SPLICE TBC1D13^ENSG00000107021.16 chr9:128788407:+ ZER1^ENSG00000160445.11 chr9:128755659:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1480:30529:6128 . YES_LDAS 0.0102 GT 1.9656 AG 1.9086 "[""INTRACHROMOSOMAL[chr9:0.01Mb]"",""LOCAL_INVERSION:+:-:[14839]""]" chr9:128788407-chr9:128755659 False 0 Read count too low: 1 < 5 FAIL 1
TBC1D1--LAMA1 1 0 0.5 0.0 INCL_NON_REF_SPLICE TBC1D1^ENSG00000065882.16 chr4:37902512:+ LAMA1^ENSG00000101680.15 chr18:7042878:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2208:20845:21892 . YES_LDAS 0.0051 GT 1.6049 AG 1.9329 "[""INTERCHROMOSOMAL[chr4--chr18]""]" chr4:37902512-chr18:7042878 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
TBC1D1--BNIPL 1 0 0.5 0.0 INCL_NON_REF_SPLICE TBC1D1^ENSG00000065882.16 chr4:37902512:+ BNIPL^ENSG00000163141.20 chr1:151046982:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2208:20845:21892 . YES_LDAS 0.0051 GT 1.6049 AG 1.9329 "[""INTERCHROMOSOMAL[chr4--chr1]""]" chr4:37902512-chr1:151046982 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
TAX1BP3--ATP2A3 1 0 1.0 0.0 ONLY_REF_SPLICE TAX1BP3^ENSG00000213977.8 chr17:3668488:- ATP2A3^ENSG00000074370.18 chr17:3925438:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1357:2019:20449 . YES_LDAS 0.0102 GT 1.7819 AG 1.7968 "[""INTRACHROMOSOMAL[chr17:0.26Mb]""]" chr17:3668488-chr17:3925438 False 0 Read count too low: 1 < 5 FAIL 1
TATDN2--CD247 1 0 0.5 0.0 INCL_NON_REF_SPLICE TATDN2^ENSG00000157014.11 chr3:10260442:+ CD247^ENSG00000198821.11 chr1:167440538:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1134:42178:24008 . NO_LDAS 0.0051 GT 1.7465 AG 1.5656 "[""INTERCHROMOSOMAL[chr3--chr1]""]" chr3:10260442-chr1:167440538 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TATDN2--ATF7 1 0 0.5 0.0 INCL_NON_REF_SPLICE TATDN2^ENSG00000157014.11 chr3:10260442:+ ATF7^ENSG00000170653.19 chr12:53512607:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1134:42178:24008 . NO_LDAS 0.0051 GT 1.7465 AG 1.8062 "[""INTERCHROMOSOMAL[chr3--chr12]""]" chr3:10260442-chr12:53512607 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TASOR2--MBNL1 1 0 1.0 0.0 ONLY_REF_SPLICE TASOR2^ENSG00000108021.20 chr10:5685175:+ MBNL1^ENSG00000152601.17 chr3:152432717:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2309:30933:19300 . NO_LDAS 0.0102 GT 1.5656 AG 1.8295 "[""INTERCHROMOSOMAL[chr10--chr3]""]" chr10:5685175-chr3:152432717 False 0 Read count too low: 1 < 5 FAIL 1
TASOR--SATL1 1 0 1.0 0.0 INCL_NON_REF_SPLICE TASOR^ENSG00000163946.13 chr3:56624828:- SATL1^ENSG00000184788.14 chrX:85092424:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2227:6210:2317 . NO_LDAS 0.0102 GT 1.7968 AG 1.8892 "[""INTERCHROMOSOMAL[chr3--chrX]""]" chr3:56624828-chrX:85092424 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TARS1--UBE4B 1 0 1.0 0.0 ONLY_REF_SPLICE TARS1^ENSG00000113407.14 chr5:33453412:+ UBE4B^ENSG00000130939.20 chr1:10171138:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1451:21055:20996 . NO_LDAS 0.0102 GT 1.7819 AG 1.9086 "[""INTERCHROMOSOMAL[chr5--chr1]""]" chr5:33453412-chr1:10171138 False 0 Read count too low: 1 < 5 FAIL 1
TAP2--OR9H1P 1 0 1.0 0.0 INCL_NON_REF_SPLICE TAP2^ENSG00000204267.16 chr6:32837537:- OR9H1P^ENSG00000228336.2 chr1:247775692:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2124:28951:10010 . NO_LDAS 0.0102 GT 1.7819 AG 1.6895 "[""INTERCHROMOSOMAL[chr6--chr1]""]" chr6:32837537-chr1:247775692 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TAOK3--SFSWAP 1 0 1.0 0.0 ONLY_REF_SPLICE TAOK3^ENSG00000135090.14 chr12:118359506:- SFSWAP^ENSG00000061936.10 chr12:131753123:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2268:38942:7586 . YES_LDAS 0.0102 GT 1.8062 AG 1.7819 "[""INTRACHROMOSOMAL[chr12:13.34Mb]""]" chr12:118359506-chr12:131753123 False 0 Read count too low: 1 < 5 FAIL 1
TALDO1--RRBP1 1 0 1.0 0.0 ONLY_REF_SPLICE TALDO1^ENSG00000177156.11 chr11:747578:+ RRBP1^ENSG00000125844.16 chr20:17680075:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1218:7140:15251 . YES_LDAS 0.0102 GT 1.8323 AG 1.9656 "[""INTERCHROMOSOMAL[chr11--chr20]""]" chr11:747578-chr20:17680075 False 0 Read count too low: 1 < 5 FAIL 1
TAGLN2--RPS26P41 1 0 1.0 0.0 INCL_NON_REF_SPLICE TAGLN2^ENSG00000158710.15 chr1:159919335:- RPS26P41^ENSG00000237139.1 chr10:73537808:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1250:13030:7404 . NO_LDAS 0.0102 GT 1.9656 AG 1.4716 "[""INTERCHROMOSOMAL[chr1--chr10]""]" chr1:159919335-chr10:73537808 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TAF5--USO1 1 0 1.0 0.0 ONLY_REF_SPLICE TAF5^ENSG00000148835.11 chr10:103380019:+ USO1^ENSG00000138768.15 chr4:75813206:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2111:13143:21752 . NO_LDAS 0.0102 GT 1.9329 AG 1.5219 "[""INTERCHROMOSOMAL[chr10--chr4]""]" chr10:103380019-chr4:75813206 False 0 Read count too low: 1 < 5 FAIL 1
TAF4--SS18L1 1 0 1.0 0.0 ONLY_REF_SPLICE TAF4^ENSG00000130699.18 chr20:62064451:- SS18L1^ENSG00000184402.15 chr20:62158672:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2207:18272:7572 . NO_LDAS 0.0102 GT 1.7232 AG 1.9086 "[""INTRACHROMOSOMAL[chr20:0.08Mb]"",""LOCAL_INVERSION:-:+:[77959]""]" chr20:62064451-chr20:62158672 False 0 Read count too low: 1 < 5 FAIL 1
TAF3--PITRM1 1 0 1.0 0.0 ONLY_REF_SPLICE TAF3^ENSG00000165632.8 chr10:7824560:+ PITRM1^ENSG00000107959.17 chr10:3147737:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1154:33109:26320 . YES_LDAS 0.0102 GT 1.9656 AG 1.9899 "[""INTRACHROMOSOMAL[chr10:4.65Mb]""]" chr10:7824560-chr10:3147737 False 0 Read count too low: 1 < 5 FAIL 1
TAF1D--CYLD 1 0 1.0 0.0 ONLY_REF_SPLICE TAF1D^ENSG00000166012.17 chr11:93737064:- CYLD^ENSG00000083799.18 chr16:50782325:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2324:40204:4699 . YES_LDAS 0.0102 GT 1.9329 AG 1.9656 "[""INTERCHROMOSOMAL[chr11--chr16]""]" chr11:93737064-chr16:50782325 False 0 Read count too low: 1 < 5 FAIL 1
TAF15--GOLGA2 1 0 1.0 0.0 ONLY_REF_SPLICE TAF15^ENSG00000270647.6 chr17:35809576:+ GOLGA2^ENSG00000167110.18 chr9:128259391:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2314:21176:16442 . YES_LDAS 0.0102 GT 1.9086 AG 1.7968 "[""INTERCHROMOSOMAL[chr17--chr9]""]" chr17:35809576-chr9:128259391 False 0 Read count too low: 1 < 5 FAIL 1
TAF10--MRPL3 1 0 1.0 0.0 INCL_NON_REF_SPLICE TAF10^ENSG00000166337.10 chr11:6611664:- MRPL3^ENSG00000114686.9 chr3:131462799:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1236:17099:6857 . YES_LDAS 0.0102 GT 1.9656 AG 1.8323 "[""INTERCHROMOSOMAL[chr11--chr3]""]" chr11:6611664-chr3:131462799 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TAF1--NUP62CL 1 0 1.0 0.0 ONLY_REF_SPLICE TAF1^ENSG00000147133.16 chrX:71387461:+ NUP62CL^ENSG00000198088.10 chrX:107153503:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1403:35439:3312 . YES_LDAS 0.0102 GT 1.9899 AG 1.6402 "[""INTRACHROMOSOMAL[chrX:35.59Mb]""]" chrX:71387461-chrX:107153503 False 0 Read count too low: 1 < 5 FAIL 1
TAF1--DPY19L2 1 0 0.33 0.0 INCL_NON_REF_SPLICE TAF1^ENSG00000147133.16 chrX:71397466:+ DPY19L2^ENSG00000177990.12 chr12:63569316:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2304:44605:1813 . NO_LDAS 0.0034 GT 1.8062 AG 1.8892 "[""INTERCHROMOSOMAL[chrX--chr12]""]" chrX:71397466-chr12:63569316 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TADA3--CSNK1G2 1 0 1.0 0.0 ONLY_REF_SPLICE TADA3^ENSG00000171148.13 chr3:9784028:- CSNK1G2^ENSG00000133275.16 chr19:1978305:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1182:8653:13723 . NO_LDAS 0.0102 GT 1.9086 AG 1.7968 "[""INTERCHROMOSOMAL[chr3--chr19]""]" chr3:9784028-chr19:1978305 False 0 Read count too low: 1 < 5 FAIL 1
TACC1--UBE2V1 1 0 1.0 0.0 ONLY_REF_SPLICE TACC1^ENSG00000147526.20 chr8:38827288:+ UBE2V1^ENSG00000244687.12 chr20:50096820:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1145:28927:10276 . YES_LDAS 0.0102 GT 1.7968 AG 1.9656 "[""INTERCHROMOSOMAL[chr8--chr20]""]" chr8:38827288-chr20:50096820 False 0 Read count too low: 1 < 5 FAIL 1
TACC1--EIF1B-AS1 1 0 1.0 0.0 INCL_NON_REF_SPLICE TACC1^ENSG00000147526.20 chr8:38819850:+ EIF1B-AS1^ENSG00000280739.3 chr3:40309345:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1341:37146:14424 . NO_LDAS 0.0102 GT 1.6402 AG 1.7232 "[""INTERCHROMOSOMAL[chr8--chr3]""]" chr8:38819850-chr3:40309345 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SZT2--NFYB 1 0 1.0 0.0 ONLY_REF_SPLICE SZT2^ENSG00000198198.17 chr1:43389995:+ NFYB^ENSG00000120837.8 chr12:104135532:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2324:35366:15741 . YES_LDAS 0.0102 GT 1.4295 AG 1.8295 "[""INTERCHROMOSOMAL[chr1--chr12]""]" chr1:43389995-chr12:104135532 False 0 Read count too low: 1 < 5 FAIL 1
SZT2--BIN1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SZT2^ENSG00000198198.17 chr1:43450408:+ BIN1^ENSG00000136717.15 chr2:127054738:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2482:50276:25984 . YES_LDAS 0.0102 GT 1.6049 AG 1.8295 "[""INTERCHROMOSOMAL[chr1--chr2]""]" chr1:43450408-chr2:127054738 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SYTL3--TULP4 1 0 1.0 0.0 ONLY_REF_SPLICE SYTL3^ENSG00000164674.17 chr6:158682989:+ TULP4^ENSG00000130338.13 chr6:158312051:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2279:45584:18473 . YES_LDAS 0.0102 GT 1.9656 AG 1.9086 "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr6:0.14Mb]""]" chr6:158682989-chr6:158312051 False 0 Read count too low: 1 < 5 FAIL 1
SYNGAP1--AP2A2 1 0 1.0 0.0 ONLY_REF_SPLICE SYNGAP1^ENSG00000197283.17 chr6:33425903:+ AP2A2^ENSG00000183020.14 chr11:959437:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1211:42890:14788 . NO_LDAS 0.0102 GT 1.7819 AG 1.3383 "[""INTERCHROMOSOMAL[chr6--chr11]""]" chr6:33425903-chr11:959437 False 0 Read count too low: 1 < 5 FAIL 1
SVIL-AS1--CCNY 1 0 1.0 0.0 ONLY_REF_SPLICE SVIL-AS1^ENSG00000224597.10 chr10:29415412:+ CCNY^ENSG00000108100.18 chr10:35483404:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2431:2594:27890 . YES_LDAS 0.0102 GT 1.9219 AG 1.7819 "[""INTRACHROMOSOMAL[chr10:5.76Mb]""]" chr10:29415412-chr10:35483404 False 0 Read count too low: 1 < 5 FAIL 1
SUSD6--PSMA3-AS1 1 0 1.0 0.0 ONLY_REF_SPLICE SUSD6^ENSG00000100647.8 chr14:69658713:+ PSMA3-AS1^ENSG00000257621.8 chr14:58274010:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1123:28368:3901 . NO_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTRACHROMOSOMAL[chr14:11.31Mb]""]" chr14:69658713-chr14:58274010 False 0 Read count too low: 1 < 5 FAIL 1
SUSD3--ZNF622 1 0 1.0 0.0 INCL_NON_REF_SPLICE SUSD3^ENSG00000157303.11 chr9:93077961:+ ZNF622^ENSG00000173545.5 chr5:16465107:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2264:19364:19412 . YES_LDAS 0.0102 GT 1.8892 AG 1.8323 "[""INTERCHROMOSOMAL[chr9--chr5]""]" chr9:93077961-chr5:16465107 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SUSD3--NEK6 1 0 1.0 0.0 ONLY_REF_SPLICE SUSD3^ENSG00000157303.11 chr9:93058830:+ NEK6^ENSG00000119408.17 chr9:124301936:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1179:20643:1841 . YES_LDAS 0.0102 GT 1.585 AG 1.8256 "[""INTRACHROMOSOMAL[chr9:31.17Mb]""]" chr9:93058830-chr9:124301936 False 0 Read count too low: 1 < 5 FAIL 1
SUPT16H--LMO7-AS1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SUPT16H^ENSG00000092201.10 chr14:21363438:- LMO7-AS1^ENSG00000261105.6 chr13:75625789:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1190:12108:8384 . NO_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTERCHROMOSOMAL[chr14--chr13]""]" chr14:21363438-chr13:75625789 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SUPT16H--ARL13B 1 0 1.0 0.0 INCL_NON_REF_SPLICE SUPT16H^ENSG00000092201.10 chr14:21363438:- ARL13B^ENSG00000169379.17 chr3:94043204:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1303:11315:14017 . NO_LDAS 0.0102 GT 1.9329 AG 1.6402 "[""INTERCHROMOSOMAL[chr14--chr3]""]" chr14:21363438-chr3:94043204 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SUCLG2--CHCHD3 1 0 0.5 0.0 ONLY_REF_SPLICE SUCLG2^ENSG00000172340.15 chr3:67609455:- CHCHD3^ENSG00000106554.13 chr7:133024627:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1124:35641:15741 . YES_LDAS 0.0051 GT 1.9219 AG 1.7819 "[""INTERCHROMOSOMAL[chr3--chr7]""]" chr3:67609455-chr7:133024627 False 0 Read count too low: 1 < 5 FAIL 1
STXBP2--AC096637.2 1 0 1.0 0.0 INCL_NON_REF_SPLICE STXBP2^ENSG00000076944.16 chr19:7646344:+ AC096637.2^ENSG00000231057.4 chr1:211687692:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2292:23927:19384 . NO_LDAS 0.0102 GT 1.5219 AG 1.7056 "[""INTERCHROMOSOMAL[chr19--chr1]""]" chr19:7646344-chr1:211687692 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
STX6--CACNA1E 1 0 1.0 0.0 ONLY_REF_SPLICE STX6^ENSG00000135823.14 chr1:181005294:- CACNA1E^ENSG00000198216.12 chr1:181510477:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1108:16978:14662 . YES_LDAS 0.0102 AT 1.8892 AC 1.9656 "[""INTRACHROMOSOMAL[chr1:0.29Mb]""]" chr1:181005294-chr1:181510477 False 0 Read count too low: 1 < 5 FAIL 1
STX18-AS1--RAB28 1 0 1.0 0.0 ONLY_REF_SPLICE STX18-AS1^ENSG00000247708.8 chr4:4544907:+ RAB28^ENSG00000157869.16 chr4:13460828:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1247:51538:2892 . NO_LDAS 0.0102 GT 1.9086 AG 1.9086 "[""INTRACHROMOSOMAL[chr4:8.57Mb]""]" chr4:4544907-chr4:13460828 False 0 Read count too low: 1 < 5 FAIL 1
STX18-AS1--AC092437.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE STX18-AS1^ENSG00000247708.8 chr4:4649542:+ AC092437.1^ENSG00000280310.1 chr4:4820406:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2197:5037:3424 . NO_LDAS 0.0102 GT 1.9656 AG 1.9086 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr4:0.03Mb]"",""NEIGHBORS[33046]""]" chr4:4649542-chr4:4820406 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
STRIP1--GAS5 1 0 1.0 0.0 ONLY_REF_SPLICE STRIP1^ENSG00000143093.15 chr1:110046751:+ GAS5^ENSG00000234741.8 chr1:173864704:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2467:8483:8581 . YES_LDAS 0.0102 GT 1.7465 AG 1.9656 "[""INTRACHROMOSOMAL[chr1:63.78Mb]""]" chr1:110046751-chr1:173864704 False 0 Read count too low: 1 < 5 FAIL 1
STRADB--U8 1 0 0.2 0.0 INCL_NON_REF_SPLICE STRADB^ENSG00000082146.13 chr2:201478601:+ U8^ENSG00000206987.1 chr15:32426413:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1352:22350:10206 . NO_LDAS 0.002 GT 1.7968 AG 1.9899 "[""INTERCHROMOSOMAL[chr2--chr9]""]" chr2:201478601-chr15:32426413 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
STRADB--U8 1 0 0.2 0.0 INCL_NON_REF_SPLICE STRADB^ENSG00000082146.13 chr2:201478601:+ U8^ENSG00000207430.1 chr15:30581191:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1352:22350:10206 . NO_LDAS 0.002 GT 1.7968 AG 1.9899 "[""INTERCHROMOSOMAL[chr2--chr9]""]" chr2:201478601-chr15:30581191 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
STRADB--U8 1 0 0.2 0.0 INCL_NON_REF_SPLICE STRADB^ENSG00000082146.13 chr2:201478601:+ U8^ENSG00000238519.1 chr15:30385084:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1352:22350:10206 . NO_LDAS 0.002 GT 1.7968 AG 1.9899 "[""INTERCHROMOSOMAL[chr2--chr9]""]" chr2:201478601-chr15:30385084 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
STRADB--U8 1 0 0.2 0.0 INCL_NON_REF_SPLICE STRADB^ENSG00000082146.13 chr2:201478601:+ U8^ENSG00000207432.1 chr15:30112205:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1352:22350:10206 . NO_LDAS 0.002 GT 1.7968 AG 1.9899 "[""INTERCHROMOSOMAL[chr2--chr9]""]" chr2:201478601-chr15:30112205 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
STRADB--SNORD118 1 0 0.2 0.0 INCL_NON_REF_SPLICE STRADB^ENSG00000082146.13 chr2:201478601:+ SNORD118^ENSG00000200463.1 chr17:8173580:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1352:22350:10206 . NO_LDAS 0.002 GT 1.7968 AG 1.9329 "[""INTERCHROMOSOMAL[chr2--chr17]""]" chr2:201478601-chr17:8173580 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
STK4--PKIG 1 0 1.0 0.0 ONLY_REF_SPLICE STK4^ENSG00000101109.12 chr20:44987296:+ PKIG^ENSG00000168734.14 chr20:44614534:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1238:14009:7362 . YES_LDAS 0.0102 GT 1.9656 AG 1.8295 "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr20:0.34Mb]""]" chr20:44987296-chr20:44614534 False 0 Read count too low: 1 < 5 FAIL 1
STK4--PGBD2 1 0 1.0 0.0 ONLY_REF_SPLICE STK4^ENSG00000101109.12 chr20:44972158:+ PGBD2^ENSG00000185220.12 chr1:248917279:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2378:6849:28870 . YES_LDAS 0.0102 GT 1.7056 AG 1.8295 "[""INTERCHROMOSOMAL[chr20--chr1]""]" chr20:44972158-chr1:248917279 False 0 Read count too low: 1 < 5 FAIL 1
STK26--RAP2C 1 0 1.0 0.0 ONLY_REF_SPLICE STK26^ENSG00000134602.16 chrX:132023659:+ RAP2C^ENSG00000123728.10 chrX:132205587:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1386:2537:11369 . YES_LDAS 0.0102 GT 1.8295 AG 1.7232 "[""INTRACHROMOSOMAL[chrX:0.13Mb]""]" chrX:132023659-chrX:132205587 False 0 Read count too low: 1 < 5 FAIL 1
STK19--AL136131.2 1 0 1.0 0.0 ONLY_REF_SPLICE STK19^ENSG00000204344.15 chr6:31972757:+ AL136131.2^ENSG00000236961.1 chr6:43729292:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1213:5474:18221 . YES_LDAS 0.0102 GT 1.7056 AG 1.7465 "[""INTRACHROMOSOMAL[chr6:11.74Mb]""]" chr6:31972757-chr6:43729292 False 0 Read count too low: 1 < 5 FAIL 1
STK17B--ANKIB1 1 0 1.0 0.0 ONLY_REF_SPLICE STK17B^ENSG00000081320.11 chr2:196156439:- ANKIB1^ENSG00000001629.10 chr7:92294889:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2408:2650:16049 . YES_LDAS 0.0102 GT 1.5058 AG 1.5656 "[""INTERCHROMOSOMAL[chr2--chr7]""]" chr2:196156439-chr7:92294889 False 0 Read count too low: 1 < 5 FAIL 1
STK11--SYMPK 1 0 1.0 0.0 ONLY_REF_SPLICE STK11^ENSG00000118046.16 chr19:1223172:+ SYMPK^ENSG00000125755.19 chr19:45838615:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1428:18062:7880 . YES_LDAS 0.0102 GT 1.8892 AG 1.7819 "[""INTRACHROMOSOMAL[chr19:44.59Mb]""]" chr19:1223172-chr19:45838615 False 0 Read count too low: 1 < 5 FAIL 1
STK11--LINC01471 1 0 1.0 0.0 INCL_NON_REF_SPLICE STK11^ENSG00000118046.16 chr19:1226663:+ LINC01471^ENSG00000239921.6 chr3:127536417:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1250:31329:10234 . NO_LDAS 0.0102 GT 1.7056 AG 1.7056 "[""INTERCHROMOSOMAL[chr19--chr3]""]" chr19:1226663-chr3:127536417 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
STK10--LMX1A 1 0 1.0 0.0 INCL_NON_REF_SPLICE STK10^ENSG00000072786.13 chr5:172055726:- LMX1A^ENSG00000162761.14 chr1:165249456:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2121:38279:16610 . NO_LDAS 0.0102 GT 1.8323 AG 1.6402 "[""INTERCHROMOSOMAL[chr5--chr1]""]" chr5:172055726-chr1:165249456 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
STIM1--SP3 1 0 1.0 0.0 ONLY_REF_SPLICE STIM1^ENSG00000167323.12 chr11:4074679:+ SP3^ENSG00000172845.17 chr2:173956232:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2193:8241:9954 . NO_LDAS 0.0102 GT 1.6402 AG 1.9086 "[""INTERCHROMOSOMAL[chr11--chr2]""]" chr11:4074679-chr2:173956232 False 0 Read count too low: 1 < 5 FAIL 1
STEAP2--DAP3 1 0 1.0 0.0 ONLY_REF_SPLICE STEAP2^ENSG00000157214.14 chr7:90212045:+ DAP3^ENSG00000132676.16 chr1:155731356:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1138:51247:1715 . YES_LDAS 0.0102 GT 1.053 AG 1.9329 "[""INTERCHROMOSOMAL[chr7--chr1]""]" chr7:90212045-chr1:155731356 False 0 Read count too low: 1 < 5 FAIL 1
STAT3--AGO3 1 0 1.0 0.0 INCL_NON_REF_SPLICE STAT3^ENSG00000168610.16 chr17:42346642:- AGO3^ENSG00000126070.20 chr1:36067922:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2212:12997:3480 . NO_LDAS 0.0102 GT 1.8892 AG 1.7968 "[""INTERCHROMOSOMAL[chr17--chr1]""]" chr17:42346642-chr1:36067922 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
STARD7--MYBL2 1 0 1.0 0.0 INCL_NON_REF_SPLICE STARD7^ENSG00000084090.14 chr2:96187833:- MYBL2^ENSG00000101057.16 chr20:43673806:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1466:15052:5106 . YES_LDAS 0.0102 GT 1.9656 AG 1.8892 "[""INTERCHROMOSOMAL[chr2--chr20]""]" chr2:96187833-chr20:43673806 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
STAP1--ANKRD17 1 0 1.0 0.0 ONLY_REF_SPLICE STAP1^ENSG00000035720.8 chr4:67558929:+ ANKRD17^ENSG00000132466.19 chr4:73177533:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1493:14348:4923 . YES_LDAS 0.0102 GT 1.8892 AG 1.7968 "[""INTRACHROMOSOMAL[chr4:5.47Mb]""]" chr4:67558929-chr4:73177533 False 0 Read count too low: 1 < 5 FAIL 1
STAMBPL1--PIEZO2 1 0 0.5 0.0 ONLY_REF_SPLICE STAMBPL1^ENSG00000138134.12 chr10:88880638:+ PIEZO2^ENSG00000154864.13 chr18:10911228:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1449:33473:26727 . NO_LDAS 0.0051 GT 1.9899 AG 1.8892 "[""INTERCHROMOSOMAL[chr10--chr18]""]" chr10:88880638-chr18:10911228 False 0 Read count too low: 1 < 5 FAIL 1
STAMBPL1--AP002414.5 1 0 0.5 0.0 ONLY_REF_SPLICE STAMBPL1^ENSG00000138134.12 chr10:88880638:+ AP002414.5^ENSG00000267722.1 chr18:12081797:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1449:33473:26727 . NO_LDAS 0.0051 GT 1.9899 AG 1.8892 "[""INTERCHROMOSOMAL[chr10--chr18]""]" chr10:88880638-chr18:12081797 False 0 Read count too low: 1 < 5 FAIL 1
STAM2--EPB41L5 1 0 1.0 0.0 ONLY_REF_SPLICE STAM2^ENSG00000115145.10 chr2:152175603:- EPB41L5^ENSG00000115109.14 chr2:120042006:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1383:37437:20001 . NO_LDAS 0.0102 GT 1.8892 AG 1.2419 "[""INTRACHROMOSOMAL[chr2:31.94Mb]""]" chr2:152175603-chr2:120042006 False 0 Read count too low: 1 < 5 FAIL 1
STAG2--TMEM131 1 0 1.0 0.0 ONLY_REF_SPLICE STAG2^ENSG00000101972.19 chrX:123961856:+ TMEM131^ENSG00000075568.17 chr2:97776018:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1308:16646:24457 . YES_LDAS 0.0102 GT 1.8323 AG 1.7465 "[""INTERCHROMOSOMAL[chrX--chr2]""]" chrX:123961856-chr2:97776018 False 0 Read count too low: 1 < 5 FAIL 1
STAG2--SEPTIN6 1 0 1.0 0.0 ONLY_REF_SPLICE STAG2^ENSG00000101972.19 chrX:123960866:+ SEPTIN6^ENSG00000125354.24 chrX:119637195:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1184:29889:21500 . YES_LDAS 0.0102 GT 1.5546 AG 1.9329 "[""INTRACHROMOSOMAL[chrX:4.27Mb]""]" chrX:123960866-chrX:119637195 False 0 Read count too low: 1 < 5 FAIL 1
STAG1--MSL2 1 0 1.0 0.0 ONLY_REF_SPLICE STAG1^ENSG00000118007.13 chr3:136752195:- MSL2^ENSG00000174579.4 chr3:136152738:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2114:25076:14228 . YES_LDAS 0.0102 GT 1.7232 AG 1.9656 "[""Larsson_TCGA"",""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr3:0.14Mb]""]" chr3:136752195-chr3:136152738 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
STAG1--DENR 1 0 1.0 0.0 ONLY_REF_SPLICE STAG1^ENSG00000118007.13 chr3:136752195:- DENR^ENSG00000139726.11 chr12:122762187:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1205:15635:22901 . NO_LDAS 0.0102 GT 1.7232 AG 1.8062 "[""INTERCHROMOSOMAL[chr3--chr12]""]" chr3:136752195-chr12:122762187 False 0 Read count too low: 1 < 5 FAIL 1
ST8SIA4--CAST 1 0 1.0 0.0 ONLY_REF_SPLICE ST8SIA4^ENSG00000113532.13 chr5:100856103:- CAST^ENSG00000153113.24 chr5:96695836:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1438:47558:12364 . NO_LDAS 0.0102 GT 1.9656 AG 1.371 "[""INTRACHROMOSOMAL[chr5:4.03Mb]""]" chr5:100856103-chr5:96695836 False 0 Read count too low: 1 < 5 FAIL 1
ST6GAL1--AC064799.1 1 0 0.25 0.0 INCL_NON_REF_SPLICE ST6GAL1^ENSG00000073849.16 chr3:186963926:+ AC064799.1^ENSG00000212664.5 chr15:71341725:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2128:51959:13513 . YES_LDAS 0.0026 GT 1.8892 AG 1.7819 "[""INTERCHROMOSOMAL[chr3--chr15]""]" chr3:186963926-chr15:71341725 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SSU72--DNAJC4 1 0 0.33 0.0 INCL_NON_REF_SPLICE SSU72^ENSG00000160075.12 chr1:1574553:- DNAJC4^ENSG00000110011.13 chr11:64230796:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2470:40431:29445 . NO_LDAS 0.0034 GT 1.5329 AG 1.7232 "[""INTERCHROMOSOMAL[chr1--chr11]""]" chr1:1574553-chr11:64230796 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SSH2--TIAL1 1 0 1.0 0.0 ONLY_REF_SPLICE SSH2^ENSG00000141298.19 chr17:29648144:- TIAL1^ENSG00000151923.18 chr10:119576750:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2460:1574:26572 . NO_LDAS 0.0102 GT 1.9656 AG 1.9086 "[""INTERCHROMOSOMAL[chr17--chr10]""]" chr17:29648144-chr10:119576750 False 0 Read count too low: 1 < 5 FAIL 1
SSH2--POLE 1 0 1.0 0.0 INCL_NON_REF_SPLICE SSH2^ENSG00000141298.19 chr17:29702959:- POLE^ENSG00000177084.18 chr12:132675468:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2189:37534:1560 . NO_LDAS 0.0102 GT 1.7819 AG 1.9656 "[""INTERCHROMOSOMAL[chr17--chr12]""]" chr17:29702959-chr12:132675468 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SSBP4--PPP1R12C 1 0 1.0 0.0 ONLY_REF_SPLICE SSBP4^ENSG00000130511.16 chr19:18419707:+ PPP1R12C^ENSG00000125503.13 chr19:55096335:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1480:15910:6871 . YES_LDAS 0.0102 GT 1.5656 AG 1.7968 "[""INTRACHROMOSOMAL[chr19:36.66Mb]""]" chr19:18419707-chr19:55096335 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
SSBP3--CTNNBIP1 1 0 1.0 0.0 ONLY_REF_SPLICE SSBP3^ENSG00000157216.16 chr1:54281438:- CTNNBIP1^ENSG00000178585.15 chr1:9877989:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2402:45584:20015 . YES_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTRACHROMOSOMAL[chr1:44.32Mb]""]" chr1:54281438-chr1:9877989 False 0 Read count too low: 1 < 5 FAIL 1
SS18--USP9X 1 0 1.0 0.0 INCL_NON_REF_SPLICE SS18^ENSG00000141380.14 chr18:26087508:- USP9X^ENSG00000124486.13 chrX:41183998:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1237:45422:22004 . NO_LDAS 0.0102 GT 1.8892 AG 1.8295 "[""INTERCHROMOSOMAL[chr18--chrX]""]" chr18:26087508-chrX:41183998 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SRXN1--PRRX2-AS1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SRXN1^ENSG00000271303.2 chr20:652976:- PRRX2-AS1^ENSG00000236024.1 chr9:129713133:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1469:26791:26306 . NO_LDAS 0.0102 GT 1.8892 AG 1.5656 "[""INTERCHROMOSOMAL[chr20--chr9]""]" chr20:652976-chr9:129713133 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SRSF5--SRRM4 1 0 0.17 0.0 INCL_NON_REF_SPLICE SRSF5^ENSG00000100650.16 chr14:69771319:+ SRRM4^ENSG00000139767.10 chr12:119156720:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2386:4867:10052 . NO_LDAS 0.0017 GT 1.5656 AG 1.4566 "[""INTERCHROMOSOMAL[chr14--chr12]""]" chr14:69771319-chr12:119156720 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SRSF4--ZFAND3 1 0 1.0 0.0 ONLY_REF_SPLICE SRSF4^ENSG00000116350.17 chr1:29181646:- ZFAND3^ENSG00000156639.12 chr6:37929959:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1220:39703:23308 . YES_LDAS 0.0102 GT 1.8323 AG 1.9656 "[""INTERCHROMOSOMAL[chr1--chr6]""]" chr1:29181646-chr6:37929959 False 0 Read count too low: 1 < 5 FAIL 1
SRPK2--SYPL1 1 0 1.0 0.0 ONLY_REF_SPLICE SRPK2^ENSG00000135250.17 chr7:105388648:- SYPL1^ENSG00000008282.9 chr7:106099282:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2140:5263:1827 . YES_LDAS 0.0102 GT 1.5546 AG 1.5546 "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr7:0.69Mb]""]" chr7:105388648-chr7:106099282 False 0 Read count too low: 1 < 5 FAIL 1
SRPK1--RPL23A 1 0 1.0 0.0 INCL_NON_REF_SPLICE SRPK1^ENSG00000096063.16 chr6:35869010:- RPL23A^ENSG00000198242.14 chr17:28720892:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2197:18604:29277 . NO_LDAS 0.0102 GT 1.7056 AG 1.7968 "[""INTERCHROMOSOMAL[chr6--chr17]""]" chr6:35869010-chr17:28720892 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SRP9P1--DNAJC16 1 0 1.0 0.0 INCL_NON_REF_SPLICE SRP9P1^ENSG00000180581.7 chr10:91807298:- DNAJC16^ENSG00000116138.13 chr1:15563964:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1207:12366:8356 . NO_LDAS 0.0102 GT 1.7465 AG 1.8256 "[""INTERCHROMOSOMAL[chr10--chr1]""]" chr10:91807298-chr1:15563964 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SRP54--PRORP 1 0 1.0 0.0 ONLY_REF_SPLICE SRP54^ENSG00000100883.13 chr14:34983215:+ PRORP^ENSG00000100890.16 chr14:35180670:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1339:26734:5638 . YES_LDAS 0.0102 GT 1.5219 AG 1.7819 "[""INTRACHROMOSOMAL[chr14:0.09Mb]"",""NEIGHBORS[92160]""]" chr14:34983215-chr14:35180670 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
SRGAP3--SRRT 1 0 1.0 0.0 INCL_NON_REF_SPLICE SRGAP3^ENSG00000196220.16 chr3:8993998:- SRRT^ENSG00000087087.20 chr7:100886795:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2465:42405:3999 . NO_LDAS 0.0102 GT 1.5546 AG 1.8295 "[""INTERCHROMOSOMAL[chr3--chr7]""]" chr3:8993998-chr7:100886795 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SRBD1--FBXW7 1 0 1.0 0.0 ONLY_REF_SPLICE SRBD1^ENSG00000068784.13 chr2:45546732:- FBXW7^ENSG00000109670.16 chr4:152350124:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2428:42922:29361 . YES_LDAS 0.0102 GT 1.6895 AG 1.4566 "[""INTERCHROMOSOMAL[chr2--chr4]""]" chr2:45546732-chr4:152350124 False 0 Read count too low: 1 < 5 FAIL 1
SQSTM1--ZADH2 1 0 1.0 0.0 ONLY_REF_SPLICE SQSTM1^ENSG00000161011.20 chr5:179821141:+ ZADH2^ENSG00000180011.7 chr18:75202340:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1135:18709:16708 . YES_LDAS 0.0102 GT 1.7819 AG 1.4566 "[""DEEPEST2019"",""INTERCHROMOSOMAL[chr5--chr18]""]" chr5:179821141-chr18:75202340 False 0 Read count too low: 1 < 5 FAIL 1
SQSTM1--GRID1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SQSTM1^ENSG00000161011.20 chr5:179824087:+ GRID1^ENSG00000182771.19 chr10:86366683:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2408:35455:27862 . NO_LDAS 0.0102 GT 1.8892 AG 1.6402 "[""INTERCHROMOSOMAL[chr5--chr10]""]" chr5:179824087-chr10:86366683 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SPTLC1--ABI2 1 0 1.0 0.0 ONLY_REF_SPLICE SPTLC1^ENSG00000090054.15 chr9:92108740:- ABI2^ENSG00000138443.17 chr2:203402576:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2119:22285:21248 . YES_LDAS 0.0102 GT 1.9899 AG 1.9656 "[""INTERCHROMOSOMAL[chr9--chr2]""]" chr9:92108740-chr2:203402576 False 0 Read count too low: 1 < 5 FAIL 1
SPPL3--TAOK3 1 0 1.0 0.0 ONLY_REF_SPLICE SPPL3^ENSG00000157837.16 chr12:120903845:- TAOK3^ENSG00000135090.14 chr12:118214110:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1402:7707:26516 . YES_LDAS 0.0102 GT 1.9656 AG 1.5656 "[""INTRACHROMOSOMAL[chr12:2.39Mb]""]" chr12:120903845-chr12:118214110 False 0 Read count too low: 1 < 5 FAIL 1
SPPL2A--LINC01748 1 0 1.0 0.0 INCL_NON_REF_SPLICE SPPL2A^ENSG00000138600.10 chr15:50726321:- LINC01748^ENSG00000226476.6 chr1:60555803:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1340:16970:3830 . NO_LDAS 0.0102 GT 1.3383 AG 1.7968 "[""INTERCHROMOSOMAL[chr15--chr1]""]" chr15:50726321-chr1:60555803 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SPON2--CTBP1 1 0 1.0 0.0 ONLY_REF_SPLICE SPON2^ENSG00000159674.12 chr4:1201269:- CTBP1^ENSG00000159692.16 chr4:1228343:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1332:2416:18277 . YES_LDAS 0.0102 GT 1.8062 AG 1.9656 "[""DEEPEST2019"",""TumorFusionsNAR2018"",""INTRACHROMOSOMAL[chr4:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[2483]""]" chr4:1201269-chr4:1228343 False 0 Read count too low: 1 < 5 FAIL 1
SPECC1L--RASSF5 1 0 1.0 0.0 ONLY_REF_SPLICE SPECC1L^ENSG00000100014.20 chr22:24369320:+ RASSF5^ENSG00000266094.8 chr1:206583269:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2486:3144:26236 . YES_LDAS 0.0102 GT 1.8892 AG 1.9086 "[""INTERCHROMOSOMAL[chr22--chr1]""]" chr22:24369320-chr1:206583269 False 0 Read count too low: 1 < 5 FAIL 1
SPCS3--CLASP2 1 0 1.0 0.0 ONLY_REF_SPLICE SPCS3^ENSG00000129128.13 chr4:176320219:+ CLASP2^ENSG00000163539.17 chr3:33592496:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1208:17471:17535 . YES_LDAS 0.0102 GT 1.9329 AG 1.7465 "[""INTERCHROMOSOMAL[chr4--chr3]""]" chr4:176320219-chr3:33592496 False 0 Read count too low: 1 < 5 FAIL 1
SPATC1L--UBE2G2 1 0 1.0 0.0 ONLY_REF_SPLICE SPATC1L^ENSG00000160284.15 chr21:46184356:- UBE2G2^ENSG00000184787.19 chr21:44788095:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1450:15594:23532 . YES_LDAS 0.0102 GT 1.6729 AG 1.7465 "[""INTRACHROMOSOMAL[chr21:1.36Mb]""]" chr21:46184356-chr21:44788095 False 0 Read count too low: 1 < 5 FAIL 1
SPATC1L--PCNT 1 0 1.0 0.0 ONLY_REF_SPLICE SPATC1L^ENSG00000160284.15 chr21:46184356:- PCNT^ENSG00000160299.17 chr21:46381694:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2253:41911:25311 . YES_LDAS 0.0102 GT 1.6729 AG 1.5656 "[""INTRACHROMOSOMAL[chr21:0.14Mb]""]" chr21:46184356-chr21:46381694 False 0 Read count too low: 1 < 5 FAIL 1
SP140--SP100 1 0 1.0 0.0 ONLY_REF_SPLICE SP140^ENSG00000079263.19 chr2:230255532:+ SP100^ENSG00000067066.17 chr2:230461262:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2176:1550:28212 . YES_LDAS 0.0102 GT 1.8892 AG 1.5656 "[""ConjoinG"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr2:0.10Mb]""]" chr2:230255532-chr2:230461262 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
SP110--PARP14 1 0 1.0 0.0 ONLY_REF_SPLICE SP110^ENSG00000135899.19 chr2:230177538:- PARP14^ENSG00000173193.15 chr3:122727812:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2123:7310:4979 . YES_LDAS 0.0102 GT 1.7968 AG 1.9086 "[""INTERCHROMOSOMAL[chr2--chr3]""]" chr2:230177538-chr3:122727812 False 0 Read count too low: 1 < 5 FAIL 1
SP100--TRIP12 1 0 1.0 0.0 ONLY_REF_SPLICE SP100^ENSG00000067066.17 chr2:230417665:+ TRIP12^ENSG00000153827.14 chr2:229860531:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2392:6388:7474 . YES_LDAS 0.0102 GT 1.9656 AG 1.9899 "[""INTRACHROMOSOMAL[chr2:0.49Mb]""]" chr2:230417665-chr2:229860531 False 0 Read count too low: 1 < 5 FAIL 1
SOX8--GARS1-DT 1 0 1.0 0.0 INCL_NON_REF_SPLICE SOX8^ENSG00000005513.10 chr16:981814:+ GARS1-DT^ENSG00000196295.12 chr7:30595052:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2225:2990:12126 . NO_LDAS 0.0102 GT 1.2419 AG 1.5546 "[""INTERCHROMOSOMAL[chr16--chr7]""]" chr16:981814-chr7:30595052 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SOS2--LINC01588 1 0 1.0 0.0 ONLY_REF_SPLICE SOS2^ENSG00000100485.12 chr14:50231197:- LINC01588^ENSG00000214900.11 chr14:50089195:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2276:45147:29431 . NO_LDAS 0.0102 GT 1.8323 AG 1.9329 "[""INTRACHROMOSOMAL[chr14:0.01Mb]"",""NEIGHBORS[12087]""]" chr14:50231197-chr14:50089195 False 0 Read count too low: 1 < 5 FAIL 1
SORD2P--TUBGCP6 1 0 1.0 0.0 ONLY_REF_SPLICE SORD2P^ENSG00000259479.6 chr15:44881495:- TUBGCP6^ENSG00000128159.12 chr22:50220015:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2274:16120:22032 . YES_LDAS 0.0102 GT 1.7819 AG 1.6402 "[""INTERCHROMOSOMAL[chr15--chr22]""]" chr15:44881495-chr22:50220015 False 0 Read count too low: 1 < 5 FAIL 1
SORD2P--BUB1B 1 0 1.0 0.0 ONLY_REF_SPLICE SORD2P^ENSG00000259479.6 chr15:44881495:- BUB1B^ENSG00000156970.13 chr15:40165053:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2177:20092:28296 . YES_LDAS 0.0102 GT 1.7819 AG 1.9656 "[""INTRACHROMOSOMAL[chr15:4.60Mb]""]" chr15:44881495-chr15:40165053 False 0 Read count too low: 1 < 5 FAIL 1
SNX13--PGS1 1 0 1.0 0.0 ONLY_REF_SPLICE SNX13^ENSG00000071189.21 chr7:17940284:- PGS1^ENSG00000087157.19 chr17:78414879:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2457:7415:2331 . YES_LDAS 0.0102 GT 1.7819 AG 1.8062 "[""INTERCHROMOSOMAL[chr7--chr17]""]" chr7:17940284-chr17:78414879 False 0 Read count too low: 1 < 5 FAIL 1
SNX13--CDK13 1 0 1.0 0.0 ONLY_REF_SPLICE SNX13^ENSG00000071189.21 chr7:17940284:- CDK13^ENSG00000065883.16 chr7:39987599:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1470:7634:15208 . NO_LDAS 0.0102 GT 1.7819 AG 1.9656 "[""INTRACHROMOSOMAL[chr7:22.01Mb]""]" chr7:17940284-chr7:39987599 False 0 Read count too low: 1 < 5 FAIL 1
SNN--TGIF2 1 0 1.0 0.0 ONLY_REF_SPLICE SNN^ENSG00000184602.6 chr16:11668540:+ TGIF2^ENSG00000118707.11 chr20:36578741:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1420:44654:20785 . YES_LDAS 0.0102 GT 1.6895 AG 1.9656 "[""INTERCHROMOSOMAL[chr16--chr20]""]" chr16:11668540-chr20:36578741 False 0 Read count too low: 1 < 5 FAIL 1
SNHG8--RABGAP1L 1 0 1.0 0.0 ONLY_REF_SPLICE SNHG8^ENSG00000269893.8 chr4:118279137:+ RABGAP1L^ENSG00000152061.23 chr1:174637375:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1175:48763:12126 . YES_LDAS 0.0102 GT 1.9329 AG 1.8256 "[""INTERCHROMOSOMAL[chr4--chr1]""]" chr4:118279137-chr1:174637375 False 0 Read count too low: 1 < 5 FAIL 1
SNHG8--LILRB1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SNHG8^ENSG00000269893.8 chr4:118279688:+ LILRB1^ENSG00000104972.15 chr19:54632580:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2273:49119:3074 . YES_LDAS 0.0102 GT 1.9086 AG 1.7465 "[""INTERCHROMOSOMAL[chr4--chr19]""]" chr4:118279688-chr19:54632580 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SNHG4--ZFAND4 1 0 1.0 0.0 ONLY_REF_SPLICE SNHG4^ENSG00000281398.4 chr5:139280058:+ ZFAND4^ENSG00000172671.20 chr10:45618260:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2318:2796:7726 . YES_LDAS 0.0102 GT 1.9086 AG 1.9656 "[""INTERCHROMOSOMAL[chr5--chr10]""]" chr5:139280058-chr10:45618260 False 0 Read count too low: 1 < 5 FAIL 1
SNHG32--TMEM131L 1 0 1.0 0.0 ONLY_REF_SPLICE SNHG32^ENSG00000204387.14 chr6:31836517:+ TMEM131L^ENSG00000121210.16 chr4:153626147:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1451:41296:14382 . YES_LDAS 0.0102 GT 1.8892 AG 1.9899 "[""INTERCHROMOSOMAL[chr6--chr4]""]" chr6:31836517-chr4:153626147 False 0 Read count too low: 1 < 5 FAIL 1
SNHG3--ANO5 1 0 1.0 0.0 INCL_NON_REF_SPLICE SNHG3^ENSG00000242125.3 chr1:28508318:+ ANO5^ENSG00000171714.12 chr11:22270335:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1357:8063:21920 . YES_LDAS 0.0102 AT 1.8892 AC 1.8256 "[""INTERCHROMOSOMAL[chr1--chr11]""]" chr1:28508318-chr11:22270335 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SNHG1--PIEZO2 1 0 1.0 0.0 ONLY_REF_SPLICE SNHG1^ENSG00000255717.7 chr11:62852656:- PIEZO2^ENSG00000154864.13 chr18:10736710:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2217:40989:23378 . YES_LDAS 0.0102 GT 1.7056 AG 1.6729 "[""INTERCHROMOSOMAL[chr11--chr18]""]" chr11:62852656-chr18:10736710 False 0 Read count too low: 1 < 5 FAIL 1
SNF8--PI4KAP1 1 0 1.0 0.0 ONLY_REF_SPLICE SNF8^ENSG00000159210.10 chr17:48940924:- PI4KAP1^ENSG00000274602.5 chr22:18540645:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1101:27349:7039 . YES_LDAS 0.0102 GT 1.8256 AG 1.6729 "[""INTERCHROMOSOMAL[chr17--chr22]""]" chr17:48940924-chr22:18540645 False 0 Read count too low: 1 < 5 FAIL 1
SMYD3--ADSS2 1 0 1.0 0.0 ONLY_REF_SPLICE SMYD3^ENSG00000185420.19 chr1:246327201:- ADSS2^ENSG00000035687.10 chr1:244437768:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1378:14624:20617 . YES_LDAS 0.0102 GT 1.9219 AG 1.7819 "[""INTRACHROMOSOMAL[chr1:1.30Mb]""]" chr1:246327201-chr1:244437768 False 0 Read count too low: 1 < 5 FAIL 1
SMURF1--ANKIB1 1 0 1.0 0.0 ONLY_REF_SPLICE SMURF1^ENSG00000198742.10 chr7:99143726:- ANKIB1^ENSG00000001629.10 chr7:92294889:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2328:14502:10206 . YES_LDAS 0.0102 GT 1.9899 AG 1.5656 "[""INTRACHROMOSOMAL[chr7:6.63Mb]""]" chr7:99143726-chr7:92294889 False 0 Read count too low: 1 < 5 FAIL 1
SMPD4--BLNK 1 0 1.0 0.0 INCL_NON_REF_SPLICE SMPD4^ENSG00000136699.20 chr2:130161151:- BLNK^ENSG00000095585.17 chr10:96204088:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1496:5409:7348 . NO_LDAS 0.0102 GT 1.7968 AG 1.231 "[""INTERCHROMOSOMAL[chr2--chr10]""]" chr2:130161151-chr10:96204088 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SMPD4--AP1B1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SMPD4^ENSG00000136699.20 chr2:130157881:- AP1B1^ENSG00000100280.17 chr22:29334410:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2176:9308:16119 . NO_LDAS 0.0102 GT 1.9329 AG 1.7465 "[""INTERCHROMOSOMAL[chr2--chr22]""]" chr2:130157881-chr22:29334410 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
SMN1--SCN7A 1 0 0.5 0.0 INCL_NON_REF_SPLICE SMN1^ENSG00000172062.17 chr5:70942558:+ SCN7A^ENSG00000136546.16 chr2:166465832:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2254:39476:24232 . NO_LDAS 0.0051 GT 1.8295 AG 1.6049 "[""INTERCHROMOSOMAL[chr5--chr2]""]" chr5:70942558-chr2:166465832 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SMIM26--PRKAR1B 1 0 1.0 0.0 ONLY_REF_SPLICE SMIM26^ENSG00000232388.5 chr20:18567596:+ PRKAR1B^ENSG00000188191.15 chr7:680726:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2332:5636:16231 . YES_LDAS 0.0102 GT 1.9219 AG 1.3996 "[""INTERCHROMOSOMAL[chr20--chr7]""]" chr20:18567596-chr7:680726 False 0 Read count too low: 1 < 5 FAIL 1
SMIM13--AL022098.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SMIM13^ENSG00000224531.6 chr6:11144570:+ AL022098.1^ENSG00000287920.1 chr6:11294979:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1385:5854:11369 . YES_LDAS 0.0102 GT 1.9329 AG 1.9656 "[""INTRACHROMOSOMAL[chr6:0.15Mb]""]" chr6:11144570-chr6:11294979 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SMIM10L2A--AC009412.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SMIM10L2A^ENSG00000178947.9 chrX:135422353:+ AC009412.1^ENSG00000286075.2 chr7:6331235:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2449:37009:10290 . NO_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chrX--chr7]""]" chrX:135422353-chr7:6331235 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SMG7--TMEM241 1 0 1.0 0.0 ONLY_REF_SPLICE SMG7^ENSG00000116698.21 chr1:183472649:+ TMEM241^ENSG00000134490.14 chr18:23309744:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2101:39525:25381 . YES_LDAS 0.0102 GT 1.7968 AG 1.9656 "[""INTERCHROMOSOMAL[chr1--chr18]""]" chr1:183472649-chr18:23309744 False 0 Read count too low: 1 < 5 FAIL 1
SMG6--SSH2 1 0 1.0 0.0 ONLY_REF_SPLICE SMG6^ENSG00000070366.14 chr17:2292552:- SSH2^ENSG00000141298.19 chr17:29632931:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1153:51417:24457 . NO_LDAS 0.0102 GT 1.9656 AG 1.9656 "[""INTRACHROMOSOMAL[chr17:27.32Mb]""]" chr17:2292552-chr17:29632931 False 0 Read count too low: 1 < 5 FAIL 1
SMG1P3--LAMP2 1 0 1.0 0.0 ONLY_REF_SPLICE SMG1P3^ENSG00000180747.15 chr16:21519828:- LAMP2^ENSG00000005893.16 chrX:120431462:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1128:36442:13709 . YES_LDAS 0.0102 GT 1.6729 AG 1.9899 "[""INTERCHROMOSOMAL[chr16--chrX]""]" chr16:21519828-chrX:120431462 False 0 Read count too low: 1 < 5 FAIL 1
SMG1P3--ASL 1 0 0.5 0.0 INCL_NON_REF_SPLICE SMG1P3^ENSG00000180747.15 chr16:21502188:- ASL^ENSG00000126522.17 chr7:66081803:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1251:45357:23041 . NO_LDAS 0.0051 GT 1.5058 AG 1.7465 "[""INTERCHROMOSOMAL[chr16--chr7]""]" chr16:21502188-chr7:66081803 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SMG1P3--ABCC4 1 0 1.0 0.0 ONLY_REF_SPLICE SMG1P3^ENSG00000180747.15 chr16:21519828:- ABCC4^ENSG00000125257.16 chr13:95210781:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1323:11533:25578 . NO_LDAS 0.0102 GT 1.6729 AG 1.8892 "[""INTERCHROMOSOMAL[chr16--chr13]""]" chr16:21519828-chr13:95210781 False 0 Read count too low: 1 < 5 FAIL 1
SMDT1--TOB2 1 0 1.0 0.0 ONLY_REF_SPLICE SMDT1^ENSG00000183172.9 chr22:42079905:+ TOB2^ENSG00000183864.5 chr22:41437407:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1264:43998:22004 . NO_LDAS 0.0102 GT 1.9086 AG 1.6895 "[""INTRACHROMOSOMAL[chr22:0.63Mb]""]" chr22:42079905-chr22:41437407 False 0 Read count too low: 1 < 5 FAIL 1
SMC5-AS1--PLXDC2 1 0 0.5 0.0 INCL_NON_REF_SPLICE SMC5-AS1^ENSG00000268364.2 chr9:70258817:- PLXDC2^ENSG00000120594.17 chr10:20211678:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2469:12674:12868 . NO_LDAS 0.0051 GT 1.7232 AG 1.8892 "[""INTERCHROMOSOMAL[chr9--chr10]""]" chr9:70258817-chr10:20211678 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SMC5--NPIPB11 1 0 0.5 0.0 ONLY_REF_SPLICE SMC5^ENSG00000198887.9 chr9:70344269:+ NPIPB11^ENSG00000254206.5 chr16:29394076:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1169:38263:26699 . NO_LDAS 0.0051 GT 1.6402 AG 1.8892 "[""INTERCHROMOSOMAL[chr9--chr16]""]" chr9:70344269-chr16:29394076 False 0 Read count too low: 1 < 5 FAIL 1
SMARCC1--PDLIM7 1 0 1.0 0.0 INCL_NON_REF_SPLICE SMARCC1^ENSG00000173473.11 chr3:47738035:- PDLIM7^ENSG00000196923.14 chr5:177491142:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2213:49427:15797 . YES_LDAS 0.0102 GT 1.6402 AG 1.6402 "[""INTERCHROMOSOMAL[chr3--chr5]""]" chr3:47738035-chr5:177491142 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SMARCC1--LINC01948 1 0 1.0 0.0 INCL_NON_REF_SPLICE SMARCC1^ENSG00000173473.11 chr3:47661294:- LINC01948^ENSG00000248727.6 chr5:56452160:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2352:45171:22103 . NO_LDAS 0.0102 GT 1.9086 AG 1.5628 "[""INTERCHROMOSOMAL[chr3--chr5]""]" chr3:47661294-chr5:56452160 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SMARCC1--DNHD1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SMARCC1^ENSG00000173473.11 chr3:47587399:- DNHD1^ENSG00000179532.13 chr11:6545239:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1418:48140:29123 . YES_LDAS 0.0102 GT 1.7056 AG 1.8062 "[""INTERCHROMOSOMAL[chr3--chr11]""]" chr3:47587399-chr11:6545239 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SMARCB1--DGCR2 1 0 1.0 0.0 ONLY_REF_SPLICE SMARCB1^ENSG00000099956.20 chr22:23816936:+ DGCR2^ENSG00000070413.20 chr22:19089490:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1349:7601:13443 . YES_LDAS 0.0102 GT 1.9656 AG 1.9086 "[""INTRACHROMOSOMAL[chr22:4.66Mb]""]" chr22:23816936-chr22:19089490 False 0 Read count too low: 1 < 5 FAIL 1
SMAP2--ZNF664 1 0 1.0 0.0 INCL_NON_REF_SPLICE SMAP2^ENSG00000084070.12 chr1:40393563:+ ZNF664^ENSG00000179195.16 chr12:124003419:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1292:40204:11761 . NO_LDAS 0.0102 GT 0.0 AG 1.9656 "[""INTERCHROMOSOMAL[chr1--chr12]""]" chr1:40393563-chr12:124003419 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SMAP2--USP10 1 0 1.0 0.0 ONLY_REF_SPLICE SMAP2^ENSG00000084070.12 chr1:40374223:+ USP10^ENSG00000103194.16 chr16:84758716:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2414:13281:12322 . NO_LDAS 0.0102 GT 1.9656 AG 1.8062 "[""INTERCHROMOSOMAL[chr1--chr16]""]" chr1:40374223-chr16:84758716 False 0 Read count too low: 1 < 5 FAIL 1
SMAD1--KRR1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SMAD1^ENSG00000170365.10 chr4:145546924:+ KRR1^ENSG00000111615.14 chr12:75499907:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2359:46854:28016 . YES_LDAS 0.0102 GT 1.7819 AG 1.6402 "[""INTERCHROMOSOMAL[chr4--chr12]""]" chr4:145546924-chr12:75499907 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SLU7--ISCU 1 0 1.0 0.0 ONLY_REF_SPLICE SLU7^ENSG00000164609.10 chr5:160408329:- ISCU^ENSG00000136003.16 chr12:108565321:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1111:36208:2934 . YES_LDAS 0.0102 GT 1.6729 AG 1.8062 "[""INTERCHROMOSOMAL[chr5--chr12]""]" chr5:160408329-chr12:108565321 False 0 Read count too low: 1 < 5 FAIL 1
SLFN5--NEK6 1 0 1.0 0.0 ONLY_REF_SPLICE SLFN5^ENSG00000166750.10 chr17:35243143:+ NEK6^ENSG00000119408.17 chr9:124301936:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2405:2359:6829 . YES_LDAS 0.0102 GT 1.5656 AG 1.8256 "[""INTERCHROMOSOMAL[chr17--chr9]""]" chr17:35243143-chr9:124301936 False 0 Read count too low: 1 < 5 FAIL 1
SLFN5--JADE1 1 0 1.0 0.0 ONLY_REF_SPLICE SLFN5^ENSG00000166750.10 chr17:35243143:+ JADE1^ENSG00000077684.16 chr4:128831733:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1495:18822:24975 . YES_LDAS 0.0102 GT 1.5656 AG 1.5656 "[""INTERCHROMOSOMAL[chr17--chr4]""]" chr17:35243143-chr4:128831733 False 0 Read count too low: 1 < 5 FAIL 1
SLFN13--CCDC18 1 0 1.0 0.0 ONLY_REF_SPLICE SLFN13^ENSG00000154760.14 chr17:35448722:- CCDC18^ENSG00000122483.17 chr1:93221609:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2466:43594:13513 . YES_LDAS 0.0102 GT 1.8295 AG 1.9329 "[""INTERCHROMOSOMAL[chr17--chr1]""]" chr17:35448722-chr1:93221609 False 0 Read count too low: 1 < 5 FAIL 1
SLC9B2--ETF1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SLC9B2^ENSG00000164038.16 chr4:103076389:- ETF1^ENSG00000120705.13 chr5:138513647:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2490:28069:29445 . NO_LDAS 0.0102 GT 1.7819 AG 1.6895 "[""INTERCHROMOSOMAL[chr4--chr5]""]" chr4:103076389-chr5:138513647 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SLC9A1--WASF3 1 0 1.0 0.0 INCL_NON_REF_SPLICE SLC9A1^ENSG00000090020.11 chr1:27109523:- WASF3^ENSG00000132970.14 chr13:26681247:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1410:10846:13457 . NO_LDAS 0.0102 GT 1.9219 AG 0.9056 "[""INTERCHROMOSOMAL[chr1--chr13]""]" chr1:27109523-chr13:26681247 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SLC7A6OS--TERF2 1 0 1.0 0.0 ONLY_REF_SPLICE SLC7A6OS^ENSG00000103061.13 chr16:68310335:- TERF2^ENSG00000132604.11 chr16:69372355:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2491:28563:28002 . YES_LDAS 0.0102 GT 1.9329 AG 1.7232 "[""INTRACHROMOSOMAL[chr16:1.04Mb]""]" chr16:68310335-chr16:69372355 False 0 Read count too low: 1 < 5 FAIL 1
SLC7A5--CTBP1 1 0 1.0 0.0 ONLY_REF_SPLICE SLC7A5^ENSG00000103257.9 chr16:87868885:- CTBP1^ENSG00000159692.16 chr4:1241519:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1160:25610:16301 . YES_LDAS 0.0102 GT 1.5301 AG 1.9329 "[""INTERCHROMOSOMAL[chr16--chr4]""]" chr16:87868885-chr4:1241519 False 0 Read count too low: 1 < 5 FAIL 1
SLC7A14-AS1--PDPK1 1 0 0.5 0.0 INCL_NON_REF_SPLICE SLC7A14-AS1^ENSG00000285051.2 chr3:170860047:+ PDPK1^ENSG00000140992.19 chr16:2557703:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1387:43917:15979 . YES_LDAS 0.0051 GC 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chr3--chr16]""]" chr3:170860047-chr16:2557703 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SLC66A2--SMC6 1 0 1.0 0.0 ONLY_REF_SPLICE SLC66A2^ENSG00000122490.19 chr18:79943329:- SMC6^ENSG00000163029.16 chr2:17745951:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2186:16371:9099 . YES_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chr18--chr2]""]" chr18:79943329-chr2:17745951 False 0 Read count too low: 1 < 5 FAIL 1
SLC44A1--SNRPN 1 0 1.0 0.0 ONLY_REF_SPLICE SLC44A1^ENSG00000070214.16 chr9:105299309:+ SNRPN^ENSG00000128739.23 chr15:24967932:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1498:21694:3494 . YES_LDAS 0.0102 GT 1.8323 AG 1.9329 "[""INTERCHROMOSOMAL[chr9--chr15]""]" chr9:105299309-chr15:24967932 False 0 Read count too low: 1 < 5 FAIL 1
SLC43A2--WDR81 1 0 1.0 0.0 ONLY_REF_SPLICE SLC43A2^ENSG00000167703.15 chr17:1627715:- WDR81^ENSG00000167716.19 chr17:1732325:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1294:16638:14578 . YES_LDAS 0.0102 GT 1.9656 AG 1.8892 "[""INTRACHROMOSOMAL[chr17:0.09Mb]"",""LOCAL_INVERSION:-:+:[87637]""]" chr17:1627715-chr17:1732325 False 0 Read count too low: 1 < 5 FAIL 1
SLC39A11--COG1 1 0 1.0 0.0 ONLY_REF_SPLICE SLC39A11^ENSG00000133195.11 chr17:72736650:- COG1^ENSG00000166685.12 chr17:73196487:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1135:6728:4447 . YES_LDAS 0.0102 GT 1.9656 AG 1.4295 "[""INTRACHROMOSOMAL[chr17:0.10Mb]"",""LOCAL_INVERSION:-:+:[99920]""]" chr17:72736650-chr17:73196487 False 0 Read count too low: 1 < 5 FAIL 1
SLC38A9--C11orf49 1 0 1.0 0.0 ONLY_REF_SPLICE SLC38A9^ENSG00000177058.12 chr5:55694083:- C11orf49^ENSG00000149179.14 chr11:47155176:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2188:8394:29333 . NO_LDAS 0.0102 GT 1.9656 AG 1.9086 "[""INTERCHROMOSOMAL[chr5--chr11]""]" chr5:55694083-chr11:47155176 False 0 Read count too low: 1 < 5 FAIL 1
SLC38A10--R3HDM4 1 0 1.0 0.0 ONLY_REF_SPLICE SLC38A10^ENSG00000157637.13 chr17:81277031:- R3HDM4^ENSG00000198858.10 chr19:897540:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1496:3387:15587 . YES_LDAS 0.0102 GT 1.9086 AG 1.8295 "[""INTERCHROMOSOMAL[chr17--chr19]""]" chr17:81277031-chr19:897540 False 0 Read count too low: 1 < 5 FAIL 1
SLC38A1--AC122697.1 1 0 1.0 0.0 ONLY_REF_SPLICE SLC38A1^ENSG00000111371.16 chr12:46229153:- AC122697.1^ENSG00000286953.1 chr5:97803936:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1208:24631:8805 . NO_LDAS 0.0102 GT 1.4566 AG 1.8892 "[""INTERCHROMOSOMAL[chr12--chr5]""]" chr12:46229153-chr5:97803936 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
SLC36A1--KCNN3 1 0 1.0 0.0 INCL_NON_REF_SPLICE SLC36A1^ENSG00000123643.13 chr5:151476687:+ KCNN3^ENSG00000143603.19 chr1:154772315:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1391:49678:26572 . NO_LDAS 0.0102 GT 1.9656 AG 1.8062 "[""INTERCHROMOSOMAL[chr5--chr1]""]" chr5:151476687-chr1:154772315 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SLC35F5--ZNF512 1 0 1.0 0.0 ONLY_REF_SPLICE SLC35F5^ENSG00000115084.15 chr2:113731584:- ZNF512^ENSG00000243943.10 chr2:27598070:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1389:48990:23784 . NO_LDAS 0.0102 GT 1.6895 AG 1.8892 "[""INTRACHROMOSOMAL[chr2:86.08Mb]""]" chr2:113731584-chr2:27598070 False 0 Read count too low: 1 < 5 FAIL 1
SLC35F5--SUMO1 1 0 0.33 0.0 ONLY_REF_SPLICE SLC35F5^ENSG00000115084.15 chr2:113723104:- SUMO1^ENSG00000116030.17 chr2:202220106:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1429:38659:2051 . YES_LDAS 0.0034 GT 1.8062 AG 1.8892 "[""INTRACHROMOSOMAL[chr2:88.45Mb]""]" chr2:113723104-chr2:202220106 False 0 Read count too low: 1 < 5 FAIL 1
SLC35E3--BAG6 1 0 1.0 0.0 INCL_NON_REF_SPLICE SLC35E3^ENSG00000175782.11 chr12:68767047:+ BAG6^ENSG00000204463.13 chr6:31642238:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2179:6987:19524 . YES_LDAS 0.0102 GT 1.9086 AG 1.8256 "[""INTERCHROMOSOMAL[chr12--chr6]""]" chr12:68767047-chr6:31642238 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SLC35E2A--ACLY 1 0 0.5 0.0 ONLY_REF_SPLICE SLC35E2A^ENSG00000215790.8 chr1:1734690:- ACLY^ENSG00000131473.17 chr17:41887703:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2327:48399:4601 . YES_LDAS 0.0051 GT 1.9329 AG 1.8295 "[""INTERCHROMOSOMAL[chr1--chr17]""]" chr1:1734690-chr17:41887703 False 0 Read count too low: 1 < 5 FAIL 1
SLC35A3--BRWD3 1 0 1.0 0.0 ONLY_REF_SPLICE SLC35A3^ENSG00000117620.15 chr1:100015420:+ BRWD3^ENSG00000165288.11 chrX:80793772:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1489:27551:13499 . YES_LDAS 0.0102 GT 1.7968 AG 1.9086 "[""INTERCHROMOSOMAL[chr1--chrX]""]" chr1:100015420-chrX:80793772 False 0 Read count too low: 1 < 5 FAIL 1
SLC35A2--PCBP2 1 0 1.0 0.0 ONLY_REF_SPLICE SLC35A2^ENSG00000102100.16 chrX:48904746:- PCBP2^ENSG00000197111.16 chr12:53461015:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2247:7844:7922 . YES_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chrX--chr12]""]" chrX:48904746-chr12:53461015 False 0 Read count too low: 1 < 5 FAIL 1
SLC2A4RG--HSF1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SLC2A4RG^ENSG00000125520.14 chr20:63743172:+ HSF1^ENSG00000185122.11 chr8:144312021:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1137:22406:23924 . YES_LDAS 0.0102 GT 1.5546 AG 1.7819 "[""INTERCHROMOSOMAL[chr20--chr8]""]" chr20:63743172-chr8:144312021 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SLC25A44--XPO5 1 0 1.0 0.0 ONLY_REF_SPLICE SLC25A44^ENSG00000160785.13 chr1:156194247:+ XPO5^ENSG00000124571.18 chr6:43526747:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2196:28352:9197 . YES_LDAS 0.0102 GT 1.8892 AG 1.3996 "[""INTERCHROMOSOMAL[chr1--chr6]""]" chr1:156194247-chr6:43526747 False 0 Read count too low: 1 < 5 FAIL 1
SLC25A38--ATXN7 1 0 1.0 0.0 ONLY_REF_SPLICE SLC25A38^ENSG00000144659.13 chr3:39383793:+ ATXN7^ENSG00000163635.20 chr3:63979915:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2104:39751:17058 . YES_LDAS 0.0102 GT 1.9329 AG 1.7232 "[""INTRACHROMOSOMAL[chr3:24.47Mb]""]" chr3:39383793-chr3:63979915 False 0 Read count too low: 1 < 5 FAIL 1
SLC25A32--SLC16A1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SLC25A32^ENSG00000164933.12 chr8:103414890:- SLC16A1^ENSG00000155380.13 chr1:112913810:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1381:24501:24190 . YES_LDAS 0.0102 GT 1.7968 AG 1.9899 "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr8--chr1]""]" chr8:103414890-chr1:112913810 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
SLC25A3--BRI3BP 1 0 1.0 0.0 ONLY_REF_SPLICE SLC25A3^ENSG00000075415.14 chr12:98594135:+ BRI3BP^ENSG00000184992.13 chr12:125012534:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1411:32049:3718 . YES_LDAS 0.0102 GT 1.7056 AG 1.8256 "[""INTRACHROMOSOMAL[chr12:26.39Mb]""]" chr12:98594135-chr12:125012534 False 0 Read count too low: 1 < 5 FAIL 1
SLC25A17--XPNPEP3 1 0 1.0 0.0 ONLY_REF_SPLICE SLC25A17^ENSG00000100372.15 chr22:40819195:- XPNPEP3^ENSG00000196236.13 chr22:40868999:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1419:11768:29179 . YES_LDAS 0.0102 GT 1.6402 AG 1.3996 "[""INTRACHROMOSOMAL[chr22:0.04Mb]"",""LOCAL_INVERSION:-:+:[37678]""]" chr22:40819195-chr22:40868999 False 0 Read count too low: 1 < 5 FAIL 1
SLC25A17--ST13 1 0 1.0 0.0 ONLY_REF_SPLICE SLC25A17^ENSG00000100372.15 chr22:40819195:- ST13^ENSG00000100380.14 chr22:40830956:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2432:46814:2527 . YES_LDAS 0.0102 GT 1.6402 AG 1.8295 "[""DEEPEST2019"",""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr22:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[5136]""]" chr22:40819195-chr22:40830956 False 0 Read count too low: 1 < 5 FAIL 1
SLC25A16--CCAR1 1 0 1.0 0.0 ONLY_REF_SPLICE SLC25A16^ENSG00000122912.15 chr10:68503632:- CCAR1^ENSG00000060339.14 chr10:68747161:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1155:49888:26404 . YES_LDAS 0.0102 GT 1.9656 AG 1.9086 "[""INTRACHROMOSOMAL[chr10:0.19Mb]""]" chr10:68503632-chr10:68747161 False 0 Read count too low: 1 < 5 FAIL 1
SLC25A13--MAGI1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SLC25A13^ENSG00000004864.14 chr7:96321942:- MAGI1^ENSG00000151276.23 chr3:65478759:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2442:28530:11663 . NO_LDAS 0.0102 GT 1.7819 AG 1.7819 "[""INTERCHROMOSOMAL[chr7--chr3]""]" chr7:96321942-chr3:65478759 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SLC20A2--FNTA 1 0 1.0 0.0 ONLY_REF_SPLICE SLC20A2^ENSG00000168575.10 chr8:42540915:- FNTA^ENSG00000168522.13 chr8:43059092:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1303:29048:2443 . NO_LDAS 0.0102 GT 1.8892 AG 1.7056 "[""INTRACHROMOSOMAL[chr8:0.49Mb]""]" chr8:42540915-chr8:43059092 False 0 Read count too low: 1 < 5 FAIL 1
SLC19A1--PCNT 1 0 1.0 0.0 ONLY_REF_SPLICE SLC19A1^ENSG00000173638.19 chr21:45525817:- PCNT^ENSG00000160299.17 chr21:46326377:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1386:19842:23938 . NO_LDAS 0.0102 GT 1.7819 AG 1.8323 "[""INTRACHROMOSOMAL[chr21:0.75Mb]""]" chr21:45525817-chr21:46326377 False 0 Read count too low: 1 < 5 FAIL 1
SLC17A5--RNF34 1 0 1.0 0.0 ONLY_REF_SPLICE SLC17A5^ENSG00000119899.13 chr6:73644407:- RNF34^ENSG00000170633.16 chr12:121416159:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1439:13782:26642 . YES_LDAS 0.0102 GT 1.7465 AG 1.7819 "[""INTERCHROMOSOMAL[chr6--chr12]""]" chr6:73644407-chr12:121416159 False 0 Read count too low: 1 < 5 FAIL 1
SLC12A6--TCF12 1 0 1.0 0.0 ONLY_REF_SPLICE SLC12A6^ENSG00000140199.13 chr15:34318561:- TCF12^ENSG00000140262.18 chr15:57166402:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1279:22625:20015 . YES_LDAS 0.0102 GT 1.9219 AG 1.5546 "[""INTRACHROMOSOMAL[chr15:22.58Mb]""]" chr15:34318561-chr15:57166402 False 0 Read count too low: 1 < 5 FAIL 1
SLBP--SH3TC1 1 0 1.0 0.0 ONLY_REF_SPLICE SLBP^ENSG00000163950.13 chr4:1711874:- SH3TC1^ENSG00000125089.17 chr4:8205167:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1259:27034:29529 . YES_LDAS 0.0102 GT 1.5656 AG 1.8295 "[""INTRACHROMOSOMAL[chr4:6.47Mb]""]" chr4:1711874-chr4:8205167 False 0 Read count too low: 1 < 5 FAIL 1
SLAMF1--ADAMTS12 1 0 1.0 0.0 ONLY_REF_SPLICE SLAMF1^ENSG00000117090.15 chr1:160634613:- ADAMTS12^ENSG00000151388.11 chr5:33751548:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2376:38093:12588 . YES_LDAS 0.0102 GT 1.8062 AG 1.8892 "[""INTERCHROMOSOMAL[chr1--chr5]""]" chr1:160634613-chr5:33751548 False 0 Read count too low: 1 < 5 FAIL 1
SLAIN1--AC128688.1 1 0 0.5 0.0 INCL_NON_REF_SPLICE SLAIN1^ENSG00000139737.22 chr13:77698926:+ AC128688.1^ENSG00000244144.1 chr3:112185689:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1165:47639:8833 . YES_LDAS 0.0051 GT 1.5546 AG 1.6895 "[""INTERCHROMOSOMAL[chr13--chr3]""]" chr13:77698926-chr3:112185689 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SKP1--CCAR1 1 0 0.5 0.0 INCL_NON_REF_SPLICE SKP1^ENSG00000113558.19 chr5:134157707:- CCAR1^ENSG00000060339.14 chr10:68722455:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1120:50616:28478 . NO_LDAS 0.0051 GT 1.9329 AG 1.8892 "[""INTERCHROMOSOMAL[chr5--chr10]""]" chr5:134157707-chr10:68722455 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SKIV2L--EIF6 1 0 1.0 0.0 INCL_NON_REF_SPLICE SKIV2L^ENSG00000204351.12 chr6:31967323:+ EIF6^ENSG00000242372.9 chr20:35284641:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1140:34323:25732 . YES_LDAS 0.0102 GT 1.9329 AG 1.4566 "[""INTERCHROMOSOMAL[chr6--chr20]""]" chr6:31967323-chr20:35284641 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SKAP2--POT1 1 0 1.0 0.0 ONLY_REF_SPLICE SKAP2^ENSG00000005020.13 chr7:26725428:- POT1^ENSG00000128513.16 chr7:124871041:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1140:11355:5456 . YES_LDAS 0.0102 GT 1.9219 AG 1.8295 "[""INTRACHROMOSOMAL[chr7:97.83Mb]""]" chr7:26725428-chr7:124871041 False 0 Read count too low: 1 < 5 FAIL 1
SKAP2--FBXL18 1 0 1.0 0.0 INCL_NON_REF_SPLICE SKAP2^ENSG00000005020.13 chr7:26684736:- FBXL18^ENSG00000155034.19 chr7:5478429:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1472:11169:18894 . NO_LDAS 0.0102 GT 1.9086 AG 1.8892 "[""INTRACHROMOSOMAL[chr7:21.15Mb]""]" chr7:26684736-chr7:5478429 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SIN3B--KRT18P66 1 0 1.0 0.0 INCL_NON_REF_SPLICE SIN3B^ENSG00000127511.10 chr19:16841968:+ KRT18P66^ENSG00000235626.2 chr9:30774440:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2146:22002:6185 . NO_LDAS 0.0102 GT 1.8892 AG 1.8062 "[""INTERCHROMOSOMAL[chr19--chr9]""]" chr19:16841968-chr9:30774440 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SIN3A--TCF12 1 0 1.0 0.0 ONLY_REF_SPLICE SIN3A^ENSG00000169375.16 chr15:75422647:- TCF12^ENSG00000140262.18 chr15:57091789:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2397:51651:17268 . YES_LDAS 0.0102 GT 1.9329 AG 1.9899 "[""INTRACHROMOSOMAL[chr15:18.07Mb]""]" chr15:75422647-chr15:57091789 False 0 Read count too low: 1 < 5 FAIL 1
SIN3A--SCAPER 1 0 1.0 0.0 ONLY_REF_SPLICE SIN3A^ENSG00000169375.16 chr15:75422647:- SCAPER^ENSG00000140386.13 chr15:76883876:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1280:36823:13807 . NO_LDAS 0.0102 GT 1.9329 AG 1.9899 "[""INTRACHROMOSOMAL[chr15:0.89Mb]""]" chr15:75422647-chr15:76883876 False 0 Read count too low: 1 < 5 FAIL 1
SIK3--SNX8 1 0 1.0 0.0 ONLY_REF_SPLICE SIK3^ENSG00000160584.16 chr11:117098143:- SNX8^ENSG00000106266.11 chr7:2278305:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1309:33853:8637 . YES_LDAS 0.0102 GT 1.8256 AG 1.7232 "[""INTERCHROMOSOMAL[chr11--chr7]""]" chr11:117098143-chr7:2278305 False 0 Read count too low: 1 < 5 FAIL 1
SHMT2--TMEM234 1 0 1.0 0.0 ONLY_REF_SPLICE SHMT2^ENSG00000182199.11 chr12:57231000:+ TMEM234^ENSG00000160055.20 chr1:32214732:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2274:30804:4727 . NO_LDAS 0.0102 GT 1.9656 AG 1.9899 "[""INTERCHROMOSOMAL[chr12--chr1]""]" chr12:57231000-chr1:32214732 False 0 Read count too low: 1 < 5 FAIL 1
SHLD1--ATP8A1 1 0 1.0 0.0 ONLY_REF_SPLICE SHLD1^ENSG00000171984.15 chr20:5773043:+ ATP8A1^ENSG00000124406.16 chr4:42627109:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1363:17487:3550 . YES_LDAS 0.0102 GT 1.9656 AG 1.7819 "[""INTERCHROMOSOMAL[chr20--chr4]""]" chr20:5773043-chr4:42627109 False 0 Read count too low: 1 < 5 FAIL 1
SHANK1--TRIM25 1 0 1.0 0.0 INCL_NON_REF_SPLICE SHANK1^ENSG00000161681.16 chr19:50659765:- TRIM25^ENSG00000121060.18 chr17:56913856:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1214:34816:25942 . NO_LDAS 0.0102 GT 0.7219 AG 1.8892 "[""INTERCHROMOSOMAL[chr19--chr17]""]" chr19:50659765-chr17:56913856 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SHANK1--COX4I1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SHANK1^ENSG00000161681.16 chr19:50668615:- COX4I1^ENSG00000131143.10 chr16:85805756:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1435:38610:17156 . NO_LDAS 0.0102 GT 1.8062 AG 1.9086 "[""INTERCHROMOSOMAL[chr19--chr16]""]" chr19:50668615-chr16:85805756 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SH3GLB2--SLCO4A1 1 0 1.0 0.0 ONLY_REF_SPLICE SH3GLB2^ENSG00000148341.18 chr9:129014411:- SLCO4A1^ENSG00000101187.16 chr20:62660412:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1166:30067:19398 . YES_LDAS 0.0102 GT 1.5656 AG 1.8256 "[""INTERCHROMOSOMAL[chr9--chr20]""]" chr9:129014411-chr20:62660412 False 0 Read count too low: 1 < 5 FAIL 1
SH3BGRL--AL445213.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SH3BGRL^ENSG00000131171.13 chrX:81202245:+ AL445213.1^ENSG00000224523.1 chrX:81421421:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2214:48877:29053 . YES_LDAS 0.0102 GT 1.9329 AG 1.3996 "[""INTRACHROMOSOMAL[chrX:0.11Mb]""]" chrX:81202245-chrX:81421421 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
SH2B3--ECHDC3 1 0 1.0 0.0 ONLY_REF_SPLICE SH2B3^ENSG00000111252.11 chr12:111418877:+ ECHDC3^ENSG00000134463.15 chr10:11752137:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1131:7965:3312 . NO_LDAS 0.0102 GT 1.7968 AG 1.8256 "[""INTERCHROMOSOMAL[chr12--chr10]""]" chr12:111418877-chr10:11752137 False 0 Read count too low: 1 < 5 FAIL 1
SGTB--SSBP2 1 0 1.0 0.0 ONLY_REF_SPLICE SGTB^ENSG00000197860.10 chr5:65704279:- SSBP2^ENSG00000145687.16 chr5:81615557:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1493:42000:18571 . YES_LDAS 0.0102 GT 1.9086 AG 1.6402 "[""INTRACHROMOSOMAL[chr5:15.69Mb]""]" chr5:65704279-chr5:81615557 False 0 Read count too low: 1 < 5 FAIL 1
SGO2--POLI 1 0 1.0 0.0 ONLY_REF_SPLICE SGO2^ENSG00000163535.18 chr2:200575461:+ POLI^ENSG00000101751.11 chr18:54271360:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1350:47809:27399 . YES_LDAS 0.0102 GT 1.8256 AG 1.9329 "[""INTERCHROMOSOMAL[chr2--chr18]""]" chr2:200575461-chr18:54271360 False 0 Read count too low: 1 < 5 FAIL 1
SGCD--SORL1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SGCD^ENSG00000170624.14 chr5:156763490:+ SORL1^ENSG00000137642.13 chr11:121589259:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2133:22770:25031 . NO_LDAS 0.0102 GT 1.9086 AG 1.9656 "[""INTERCHROMOSOMAL[chr5--chr11]""]" chr5:156763490-chr11:121589259 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SFXN2--GABPB2 1 0 1.0 0.0 ONLY_REF_SPLICE SFXN2^ENSG00000156398.13 chr10:102727157:+ GABPB2^ENSG00000143458.12 chr1:151088190:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2222:52129:12210 . YES_LDAS 0.0102 GT 1.9656 AG 1.8323 "[""INTERCHROMOSOMAL[chr10--chr1]""]" chr10:102727157-chr1:151088190 False 0 Read count too low: 1 < 5 FAIL 1
SFSWAP--PTPN11 1 0 1.0 0.0 ONLY_REF_SPLICE SFSWAP^ENSG00000061936.10 chr12:131711447:+ PTPN11^ENSG00000179295.18 chr12:112505825:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2111:31467:12966 . YES_LDAS 0.0102 GT 1.9656 AG 1.9656 "[""INTRACHROMOSOMAL[chr12:19.20Mb]""]" chr12:131711447-chr12:112505825 False 0 Read count too low: 1 < 5 FAIL 1
SFSWAP--EP400P1 1 0 1.0 0.0 ONLY_REF_SPLICE SFSWAP^ENSG00000061936.10 chr12:131711447:+ EP400P1^ENSG00000185684.15 chr12:132120420:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1447:5385:10416 . NO_LDAS 0.0102 GT 1.9656 AG 1.9086 "[""INTRACHROMOSOMAL[chr12:0.28Mb]""]" chr12:131711447-chr12:132120420 False 0 Read count too low: 1 < 5 FAIL 1
SFMBT2--PUM2 1 0 1.0 0.0 ONLY_REF_SPLICE SFMBT2^ENSG00000198879.12 chr10:7367649:- PUM2^ENSG00000055917.16 chr2:20327378:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1221:41531:12742 . YES_LDAS 0.0102 GT 1.8323 AG 1.6895 "[""INTERCHROMOSOMAL[chr10--chr2]""]" chr10:7367649-chr2:20327378 False 0 Read count too low: 1 < 5 FAIL 1
SFMBT2--CDK1 1 0 1.0 0.0 ONLY_REF_SPLICE SFMBT2^ENSG00000198879.12 chr10:7367649:- CDK1^ENSG00000170312.16 chr10:60793877:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1449:51255:1532 . YES_LDAS 0.0102 GT 1.8323 AG 1.5628 "[""INTRACHROMOSOMAL[chr10:53.37Mb]""]" chr10:7367649-chr10:60793877 False 0 Read count too low: 1 < 5 FAIL 1
SF3B1--NICN2P 1 0 1.0 0.0 INCL_NON_REF_SPLICE SF3B1^ENSG00000115524.17 chr2:197405301:- NICN2P^ENSG00000237623.1 chrX:47273379:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2467:34015:10991 . NO_LDAS 0.0102 AT 1.8323 AC 1.9086 "[""INTERCHROMOSOMAL[chr2--chrX]""]" chr2:197405301-chrX:47273379 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SETDB1--DCAF1 1 0 1.0 0.0 ONLY_REF_SPLICE SETDB1^ENSG00000143379.12 chr1:150927974:+ DCAF1^ENSG00000145041.15 chr3:51471005:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2451:36272:29501 . YES_LDAS 0.0102 GT 1.9899 AG 1.8892 "[""INTERCHROMOSOMAL[chr1--chr3]""]" chr1:150927974-chr3:51471005 False 0 Read count too low: 1 < 5 FAIL 1
SETD3--IFI27L1 1 0 1.0 0.0 ONLY_REF_SPLICE SETD3^ENSG00000183576.13 chr14:99458279:- IFI27L1^ENSG00000165948.11 chr14:94096887:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2329:33142:29515 . YES_LDAS 0.0102 GT 1.8892 AG 1.8323 "[""INTRACHROMOSOMAL[chr14:5.29Mb]""]" chr14:99458279-chr14:94096887 False 0 Read count too low: 1 < 5 FAIL 1
SETD2--ISCA1 1 0 1.0 0.0 ONLY_REF_SPLICE SETD2^ENSG00000181555.21 chr3:47037666:- ISCA1^ENSG00000135070.15 chr9:86266191:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1374:4260:11551 . YES_LDAS 0.0102 GT 1.7465 AG 1.9329 "[""INTERCHROMOSOMAL[chr3--chr9]""]" chr3:47037666-chr9:86266191 False 0 Read count too low: 1 < 5 FAIL 1
SERPINB8--WDR37 1 0 1.0 0.0 ONLY_REF_SPLICE SERPINB8^ENSG00000166401.15 chr18:63981838:+ WDR37^ENSG00000047056.16 chr10:1080011:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1370:16072:5526 . YES_LDAS 0.0102 GT 1.6895 AG 1.8892 "[""INTERCHROMOSOMAL[chr18--chr10]""]" chr18:63981838-chr10:1080011 False 0 Read count too low: 1 < 5 FAIL 1
SERF2--AC096720.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SERF2^ENSG00000140264.21 chr15:43793769:+ AC096720.1^ENSG00000270257.1 chr4:67638357:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2202:48383:26600 . NO_LDAS 0.0102 GT 1.5058 AG 1.5329 "[""INTERCHROMOSOMAL[chr15--chr4]""]" chr15:43793769-chr4:67638357 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SERF1A--CTCF 1 0 0.5 0.0 ONLY_REF_SPLICE SERF1A^ENSG00000172058.16 chr5:70917048:+ CTCF^ENSG00000102974.16 chr16:67611951:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1482:21079:1168 . YES_LDAS 0.0051 GT 1.8062 AG 1.7465 "[""INTERCHROMOSOMAL[chr5--chr16]""]" chr5:70917048-chr16:67611951 False 0 Read count too low: 1 < 5 FAIL 1
SERF1A--BLNK 1 0 0.5 0.0 ONLY_REF_SPLICE SERF1A^ENSG00000172058.16 chr5:70917048:+ BLNK^ENSG00000095585.17 chr10:96207899:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1230:38408:18263 . YES_LDAS 0.0051 GT 1.8062 AG 1.3383 "[""INTERCHROMOSOMAL[chr5--chr10]""]" chr5:70917048-chr10:96207899 False 0 Read count too low: 1 < 5 FAIL 1
SEPTIN7--MRPS35 1 0 1.0 0.0 ONLY_REF_SPLICE SEPTIN7^ENSG00000122545.20 chr7:35801270:+ MRPS35^ENSG00000061794.13 chr12:27714780:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1132:3662:26488 . NO_LDAS 0.0102 GT 1.8256 AG 1.5656 "[""INTERCHROMOSOMAL[chr7--chr12]""]" chr7:35801270-chr12:27714780 False 0 Read count too low: 1 < 5 FAIL 1
SEPTIN7--IER5L 1 0 1.0 0.0 INCL_NON_REF_SPLICE SEPTIN7^ENSG00000122545.20 chr7:35899395:+ IER5L^ENSG00000188483.8 chr9:129178026:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1409:6477:5918 . YES_LDAS 0.0102 GT 1.7465 AG 1.8892 "[""INTERCHROMOSOMAL[chr7--chr9]""]" chr7:35899395-chr9:129178026 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SEPTIN7--AC132153.1 1 0 1.0 0.0 ONLY_REF_SPLICE SEPTIN7^ENSG00000122545.20 chr7:35832900:+ AC132153.1^ENSG00000285755.2 chr2:57298489:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1295:19122:6072 . YES_LDAS 0.0102 GT 1.8323 AG 1.5329 "[""INTERCHROMOSOMAL[chr7--chr2]""]" chr7:35832900-chr2:57298489 False 0 Read count too low: 1 < 5 FAIL 1
SEPTIN2--TFAM 1 0 1.0 0.0 INCL_NON_REF_SPLICE SEPTIN2^ENSG00000168385.18 chr2:241352302:+ TFAM^ENSG00000108064.11 chr10:58385616:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1384:9689:3018 . YES_LDAS 0.0102 AT 1.9899 AC 1.8295 "[""INTERCHROMOSOMAL[chr2--chr10]""]" chr2:241352302-chr10:58385616 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SEPTIN14--DDX1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SEPTIN14^ENSG00000154997.9 chr7:55795924:- DDX1^ENSG00000079785.16 chr2:15617244:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1104:43367:4489 . YES_LDAS 0.0102 GT 1.5546 AG 1.5656 "[""INTERCHROMOSOMAL[chr7--chr2]""]" chr7:55795924-chr2:15617244 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SEPTIN14--AC138035.1 1 0 0.2 0.0 INCL_NON_REF_SPLICE SEPTIN14^ENSG00000154997.9 chr7:55795924:- AC138035.1^ENSG00000238035.8 chr5:181316290:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1266:21306:11593 . YES_LDAS 0.002 GT 1.5546 AG 1.8892 "[""INTERCHROMOSOMAL[chr7--chr5]""]" chr7:55795924-chr5:181316290 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SEPSECS--RNF187 1 0 1.0 0.0 INCL_NON_REF_SPLICE SEPSECS^ENSG00000109618.13 chr4:25159446:- RNF187^ENSG00000168159.14 chr1:228493053:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2451:18143:22481 . YES_LDAS 0.0102 GT 1.5546 AG 1.8892 "[""INTERCHROMOSOMAL[chr4--chr1]""]" chr4:25159446-chr1:228493053 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SENP6--TPX2 1 0 1.0 0.0 ONLY_REF_SPLICE SENP6^ENSG00000112701.18 chr6:75670720:+ TPX2^ENSG00000088325.16 chr20:31778813:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2114:22916:7936 . YES_LDAS 0.0102 GT 1.9086 AG 1.9329 "[""INTERCHROMOSOMAL[chr6--chr20]""]" chr6:75670720-chr20:31778813 False 0 Read count too low: 1 < 5 FAIL 1
SEMA6B--KDM5C 1 0 1.0 0.0 INCL_NON_REF_SPLICE SEMA6B^ENSG00000167680.17 chr19:4544432:- KDM5C^ENSG00000126012.12 chrX:53217905:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1374:17285:5330 . NO_LDAS 0.0102 GT 1.5546 AG 1.7232 "[""INTERCHROMOSOMAL[chr19--chrX]""]" chr19:4544432-chrX:53217905 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SEMA5A--PIN1 1 0 1.0 0.0 ONLY_REF_SPLICE SEMA5A^ENSG00000112902.12 chr5:9108140:- PIN1^ENSG00000127445.14 chr19:9848030:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2115:24987:22873 . YES_LDAS 0.0102 GT 1.9219 AG 1.8892 "[""INTERCHROMOSOMAL[chr5--chr19]""]" chr5:9108140-chr19:9848030 False 0 Read count too low: 1 < 5 FAIL 1
SELENOF--HS2ST1 1 0 1.0 0.0 ONLY_REF_SPLICE SELENOF^ENSG00000183291.17 chr1:86914028:- HS2ST1^ENSG00000153936.17 chr1:87072934:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2177:4988:6843 . YES_LDAS 0.0102 GT 1.9899 AG 1.8892 "[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_INVERSION:-:+:[211]""]" chr1:86914028-chr1:87072934 False 0 Read count too low: 1 < 5 FAIL 1
SEC24B--OSTC 1 0 1.0 0.0 ONLY_REF_SPLICE SEC24B^ENSG00000138802.11 chr4:109434002:+ OSTC^ENSG00000198856.13 chr4:108667247:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2492:30804:8875 . YES_LDAS 0.0102 GT 1.5656 AG 1.7968 "[""INTRACHROMOSOMAL[chr4:0.77Mb]""]" chr4:109434002-chr4:108667247 False 0 Read count too low: 1 < 5 FAIL 1
SEC24A--LNPEP 1 0 1.0 0.0 ONLY_REF_SPLICE SEC24A^ENSG00000113615.13 chr5:134674775:+ LNPEP^ENSG00000113441.16 chr5:96996390:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1292:34509:22074 . NO_LDAS 0.0102 GT 1.9329 AG 1.8323 "[""INTRACHROMOSOMAL[chr5:37.61Mb]""]" chr5:134674775-chr5:96996390 False 0 Read count too low: 1 < 5 FAIL 1
SEC24A--JADE2 1 0 1.0 0.0 ONLY_REF_SPLICE SEC24A^ENSG00000113615.13 chr5:134649173:+ JADE2^ENSG00000043143.21 chr5:134573645:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1358:18652:19608 . YES_LDAS 0.0102 GT 1.6402 AG 1.9329 "[""DEEPEST2019"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr5:0.07Mb]"",""LOCAL_REARRANGEMENT:+:[65555]""]" chr5:134649173-chr5:134573645 False 0 Read count too low: 1 < 5 FAIL 1
SEC22C--RABGAP1L 1 0 1.0 0.0 ONLY_REF_SPLICE SEC22C^ENSG00000093183.14 chr3:42568865:- RABGAP1L^ENSG00000152061.23 chr1:174811832:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2143:42736:7908 . YES_LDAS 0.0102 GT 1.8323 AG 1.7465 "[""INTERCHROMOSOMAL[chr3--chr1]""]" chr3:42568865-chr1:174811832 False 0 Read count too low: 1 < 5 FAIL 1
SEC22B--EDEM3 1 0 1.0 0.0 ONLY_REF_SPLICE SEC22B^ENSG00000265808.4 chr1:120176307:- EDEM3^ENSG00000116406.19 chr1:184694472:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1292:2618:19580 . YES_LDAS 0.0102 GT 1.5219 AG 1.8295 "[""INTRACHROMOSOMAL[chr1:64.51Mb]""]" chr1:120176307-chr1:184694472 False 0 Read count too low: 1 < 5 FAIL 1
SEC22A--ZNF607 1 0 1.0 0.0 INCL_NON_REF_SPLICE SEC22A^ENSG00000121542.12 chr3:123208937:+ ZNF607^ENSG00000198182.13 chr19:37711692:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2266:39225:4461 . NO_LDAS 0.0102 GT 1.9329 AG 1.3383 "[""INTERCHROMOSOMAL[chr3--chr19]""]" chr3:123208937-chr19:37711692 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SEC11A--SNX5 1 0 1.0 0.0 ONLY_REF_SPLICE SEC11A^ENSG00000140612.14 chr15:84716025:- SNX5^ENSG00000089006.17 chr20:17961326:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2293:29137:24681 . YES_LDAS 0.0102 GT 1.7819 AG 1.8892 "[""INTERCHROMOSOMAL[chr15--chr20]""]" chr15:84716025-chr20:17961326 False 0 Read count too low: 1 < 5 FAIL 1
SDF4--CDK11B 1 0 1.0 0.0 ONLY_REF_SPLICE SDF4^ENSG00000078808.19 chr1:1228468:- CDK11B^ENSG00000248333.9 chr1:1638590:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1485:24421:10795 . YES_LDAS 0.0102 GT 1.8892 AG 1.6895 "[""INTRACHROMOSOMAL[chr1:0.40Mb]""]" chr1:1228468-chr1:1638590 False 0 Read count too low: 1 < 5 FAIL 1
SCYL3--PTPN22 1 0 1.0 0.0 ONLY_REF_SPLICE SCYL3^ENSG00000000457.14 chr1:169878634:- PTPN22^ENSG00000134242.16 chr1:113819654:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1404:6647:25718 . NO_LDAS 0.0102 GT 1.9329 AG 1.7232 "[""INTRACHROMOSOMAL[chr1:55.98Mb]""]" chr1:169878634-chr1:113819654 False 0 Read count too low: 1 < 5 FAIL 1
SCPEP1--ZBTB44 1 0 1.0 0.0 ONLY_REF_SPLICE SCPEP1^ENSG00000121064.13 chr17:56981230:+ ZBTB44^ENSG00000196323.14 chr11:130237093:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2460:29186:23672 . YES_LDAS 0.0102 GT 1.9086 AG 1.7819 "[""INTERCHROMOSOMAL[chr17--chr11]""]" chr17:56981230-chr11:130237093 False 0 Read count too low: 1 < 5 FAIL 1
SCLT1--DDIAS 1 0 1.0 0.0 ONLY_REF_SPLICE SCLT1^ENSG00000151466.12 chr4:128888679:- DDIAS^ENSG00000165490.13 chr11:82914723:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2125:23612:2135 . YES_LDAS 0.0102 GT 1.9219 AG 1.9329 "[""INTERCHROMOSOMAL[chr4--chr11]""]" chr4:128888679-chr11:82914723 False 0 Read count too low: 1 < 5 FAIL 1
SCIMP--LARP4 1 0 1.0 0.0 ONLY_REF_SPLICE SCIMP^ENSG00000161929.15 chr17:5234735:- LARP4^ENSG00000161813.22 chr12:50461135:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2414:48270:27217 . YES_LDAS 0.0102 GT 1.9329 AG 1.9656 "[""INTERCHROMOSOMAL[chr17--chr12]""]" chr17:5234735-chr12:50461135 False 0 Read count too low: 1 < 5 FAIL 1
SCFD1--AL049828.1 1 0 1.0 0.0 ONLY_REF_SPLICE SCFD1^ENSG00000092108.22 chr14:30653588:+ AL049828.1^ENSG00000258526.7 chr14:39642713:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2229:2634:18992 . YES_LDAS 0.0102 GT 1.9656 AG 1.7968 "[""INTRACHROMOSOMAL[chr14:8.69Mb]""]" chr14:30653588-chr14:39642713 False 0 Read count too low: 1 < 5 FAIL 1
SCARNA7--APBB1IP 1 0 1.0 0.0 INCL_NON_REF_SPLICE SCARNA7^ENSG00000238741.1 chr3:160515069:- APBB1IP^ENSG00000077420.16 chr10:26503216:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2290:22924:5176 . YES_LDAS 0.0102 GT 1.8295 AG 1.8295 "[""INTERCHROMOSOMAL[chr3--chr10]""]" chr3:160515069-chr10:26503216 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SCARB1--DCUN1D4 1 0 1.0 0.0 ONLY_REF_SPLICE SCARB1^ENSG00000073060.17 chr12:124863595:- DCUN1D4^ENSG00000109184.15 chr4:51863437:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1158:32017:4363 . YES_LDAS 0.0102 GT 1.9899 AG 1.8892 "[""INTERCHROMOSOMAL[chr12--chr4]""]" chr12:124863595-chr4:51863437 False 0 Read count too low: 1 < 5 FAIL 1
SCAP--EXOSC10 1 0 1.0 0.0 ONLY_REF_SPLICE SCAP^ENSG00000114650.20 chr3:47435008:- EXOSC10^ENSG00000171824.14 chr1:11076948:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1108:19987:5386 . NO_LDAS 0.0102 GT 1.8295 AG 1.9329 "[""INTERCHROMOSOMAL[chr3--chr1]""]" chr3:47435008-chr1:11076948 False 0 Read count too low: 1 < 5 FAIL 1
SCAMP1--WDR41 1 0 1.0 0.0 ONLY_REF_SPLICE SCAMP1^ENSG00000085365.18 chr5:78421960:+ WDR41^ENSG00000164253.14 chr5:77464809:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1150:51037:4041 . YES_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTRACHROMOSOMAL[chr5:0.74Mb]""]" chr5:78421960-chr5:77464809 False 0 Read count too low: 1 < 5 FAIL 1
SCAF8--PPP6R3 1 0 1.0 0.0 ONLY_REF_SPLICE SCAF8^ENSG00000213079.10 chr6:154733930:+ PPP6R3^ENSG00000110075.15 chr11:68571040:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2437:16031:18263 . YES_LDAS 0.0102 GT 1.9656 AG 1.7819 "[""INTERCHROMOSOMAL[chr6--chr11]""]" chr6:154733930-chr11:68571040 False 0 Read count too low: 1 < 5 FAIL 1
SBNO2--CBFA2T3 1 0 1.0 0.0 ONLY_REF_SPLICE SBNO2^ENSG00000064932.16 chr19:1147309:- CBFA2T3^ENSG00000129993.15 chr16:88892485:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1272:34865:26811 . YES_LDAS 0.0102 GT 1.9329 AG 1.9086 "[""INTERCHROMOSOMAL[chr19--chr16]""]" chr19:1147309-chr16:88892485 False 0 Read count too low: 1 < 5 FAIL 1
SBNO1--TRPV1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SBNO1^ENSG00000139697.14 chr12:123327777:- TRPV1^ENSG00000196689.12 chr17:3590361:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1448:45479:27960 . NO_LDAS 0.0102 GT 1.9899 AG 1.8892 "[""INTERCHROMOSOMAL[chr12--chr17]""]" chr12:123327777-chr17:3590361 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SBF2--STX7 1 0 1.0 0.0 ONLY_REF_SPLICE SBF2^ENSG00000133812.17 chr11:10028452:- STX7^ENSG00000079950.14 chr6:132503588:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1276:38254:14298 . YES_LDAS 0.0102 GT 1.9656 AG 1.9329 "[""INTERCHROMOSOMAL[chr11--chr6]""]" chr11:10028452-chr6:132503588 False 0 Read count too low: 1 < 5 FAIL 1
SARM1--TCERG1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SARM1^ENSG00000004139.14 chr17:28388539:+ TCERG1^ENSG00000113649.12 chr5:146482654:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1130:17730:24905 . YES_LDAS 0.0102 GT 1.8062 AG 1.8062 "[""INTERCHROMOSOMAL[chr17--chr5]""]" chr17:28388539-chr5:146482654 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SAP25--TMEM184B 1 0 1.0 0.0 INCL_NON_REF_SPLICE SAP25^ENSG00000205307.12 chr7:100573597:- TMEM184B^ENSG00000198792.13 chr22:38220732:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2283:47857:22187 . NO_LDAS 0.0102 GT 1.8062 AG 1.5546 "[""INTERCHROMOSOMAL[chr7--chr22]""]" chr7:100573597-chr22:38220732 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SAMHD1--SLFN5 1 0 1.0 0.0 ONLY_REF_SPLICE SAMHD1^ENSG00000101347.10 chr20:36946738:- SLFN5^ENSG00000166750.10 chr17:35258651:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1390:41021:22593 . YES_LDAS 0.0102 GT 1.8062 AG 1.8892 "[""INTERCHROMOSOMAL[chr20--chr17]""]" chr20:36946738-chr17:35258651 False 0 Read count too low: 1 < 5 FAIL 1
SAMD5--TUBE1 1 0 1.0 0.0 ONLY_REF_SPLICE SAMD5^ENSG00000203727.4 chr6:147509387:+ TUBE1^ENSG00000074935.14 chr6:112081207:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1104:2197:2401 . YES_LDAS 0.0102 GT 1.8295 AG 1.8892 "[""INTRACHROMOSOMAL[chr6:35.42Mb]""]" chr6:147509387-chr6:112081207 False 0 Read count too low: 1 < 5 FAIL 1
SAMD5--LANCL1 1 0 1.0 0.0 ONLY_REF_SPLICE SAMD5^ENSG00000203727.4 chr6:147509387:+ LANCL1^ENSG00000115365.12 chr2:210476412:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2268:43570:14956 . YES_LDAS 0.0102 GT 1.8295 AG 1.585 "[""INTERCHROMOSOMAL[chr6--chr2]""]" chr6:147509387-chr2:210476412 False 0 Read count too low: 1 < 5 FAIL 1
SAMD5--AL033504.1 1 0 1.0 0.0 ONLY_REF_SPLICE SAMD5^ENSG00000203727.4 chr6:147509387:+ AL033504.1^ENSG00000227681.5 chr6:147947472:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2396:15052:8917 . YES_LDAS 0.0102 GT 1.8295 AG 1.5058 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[90682]""]" chr6:147509387-chr6:147947472 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
SACM1L--PDCD10 1 0 1.0 0.0 ONLY_REF_SPLICE SACM1L^ENSG00000211456.13 chr3:45732151:+ PDCD10^ENSG00000114209.15 chr3:167720273:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1275:1841:15124 . YES_LDAS 0.0102 GT 1.7465 AG 1.5546 "[""INTRACHROMOSOMAL[chr3:121.94Mb]""]" chr3:45732151-chr3:167720273 False 0 Read count too low: 1 < 5 FAIL 1
SACM1L--CARNMT1 1 0 1.0 0.0 ONLY_REF_SPLICE SACM1L^ENSG00000211456.13 chr3:45689497:+ CARNMT1^ENSG00000156017.13 chr9:74985010:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1452:51587:29431 . YES_LDAS 0.0102 GT 1.9329 AG 1.7819 "[""INTERCHROMOSOMAL[chr3--chr9]""]" chr3:45689497-chr9:74985010 False 0 Read count too low: 1 < 5 FAIL 1
RWDD3--SMYD3 1 0 1.0 0.0 ONLY_REF_SPLICE RWDD3^ENSG00000122481.17 chr1:95234315:+ SMYD3^ENSG00000185420.19 chr1:246355094:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1283:12091:26012 . YES_LDAS 0.0102 GT 1.9086 AG 1.6895 "[""INTRACHROMOSOMAL[chr1:150.50Mb]""]" chr1:95234315-chr1:246355094 False 0 Read count too low: 1 < 5 FAIL 1
RUNX3--AFF1 1 0 1.0 0.0 ONLY_REF_SPLICE RUNX3^ENSG00000020633.19 chr1:24964514:- AFF1^ENSG00000172493.22 chr4:87046166:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2486:13782:7334 . YES_LDAS 0.0102 GT 1.8295 AG 1.9086 "[""INTERCHROMOSOMAL[chr1--chr4]""]" chr1:24964514-chr4:87046166 False 0 Read count too low: 1 < 5 FAIL 1
RUNX1--UNC13D 1 0 1.0 0.0 ONLY_REF_SPLICE RUNX1^ENSG00000159216.19 chr21:34834410:- UNC13D^ENSG00000092929.12 chr17:75836918:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2110:13305:9225 . YES_LDAS 0.0102 GT 1.8323 AG 1.8892 "[""INTERCHROMOSOMAL[chr21--chr17]""]" chr21:34834410-chr17:75836918 False 0 Read count too low: 1 < 5 FAIL 1
RUBCN--RUNDC3B 1 0 1.0 0.0 INCL_NON_REF_SPLICE RUBCN^ENSG00000145016.16 chr3:197683307:- RUNDC3B^ENSG00000105784.15 chr7:87807413:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2315:36588:15895 . NO_LDAS 0.0102 GT 1.9329 AG 1.7819 "[""INTERCHROMOSOMAL[chr3--chr7]""]" chr3:197683307-chr7:87807413 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RTTN--ZCCHC2 1 0 1.0 0.0 ONLY_REF_SPLICE RTTN^ENSG00000176225.15 chr18:70020615:- ZCCHC2^ENSG00000141664.10 chr18:62556203:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1225:38101:10276 . NO_LDAS 0.0102 GT 1.7819 AG 1.9656 "[""INTRACHROMOSOMAL[chr18:7.42Mb]""]" chr18:70020615-chr18:62556203 False 0 Read count too low: 1 < 5 FAIL 1
RTCB--Metazoa_SRP 1 0 1.0 0.0 INCL_NON_REF_SPLICE RTCB^ENSG00000100220.12 chr22:32392240:- Metazoa_SRP^ENSG00000274514.1 chr3:12577052:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2308:13256:26600 . NO_LDAS 0.0102 GT 1.8062 AG 1.8062 "[""INTERCHROMOSOMAL[chr22--chr17]""]" chr22:32392240-chr3:12577052 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RSPH9--MAD2L1BP 1 0 1.0 0.0 ONLY_REF_SPLICE RSPH9^ENSG00000172426.16 chr6:43656723:+ MAD2L1BP^ENSG00000124688.14 chr6:43633194:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1202:12868:28842 . YES_LDAS 0.0102 GT 1.8892 AG 1.9329 "[""INTRACHROMOSOMAL[chr6:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[4095]""]" chr6:43656723-chr6:43633194 False 0 Read count too low: 1 < 5 FAIL 1
RSBN1L--FGF2 1 0 1.0 0.0 INCL_NON_REF_SPLICE RSBN1L^ENSG00000187257.16 chr7:77697036:+ FGF2^ENSG00000138685.17 chr4:122894494:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2174:18313:14704 . NO_LDAS 0.0102 GT 1.231 AG 1.9086 "[""INTERCHROMOSOMAL[chr7--chr4]""]" chr7:77697036-chr4:122894494 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RRP1B--ITGA6 1 0 1.0 0.0 INCL_NON_REF_SPLICE RRP1B^ENSG00000160208.13 chr21:43695188:+ ITGA6^ENSG00000091409.15 chr2:172504826:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2298:12836:14158 . NO_LDAS 0.0102 GT 0.9056 AG 1.231 "[""INTERCHROMOSOMAL[chr21--chr2]""]" chr21:43695188-chr2:172504826 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RRP15--KDM4C 1 0 1.0 0.0 ONLY_REF_SPLICE RRP15^ENSG00000067533.6 chr1:218302559:+ KDM4C^ENSG00000107077.19 chr9:7015853:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1354:8427:21626 . NO_LDAS 0.0102 GT 1.3753 AG 1.6402 "[""INTERCHROMOSOMAL[chr1--chr9]""]" chr1:218302559-chr9:7015853 False 0 Read count too low: 1 < 5 FAIL 1
RRP15--ARPC4 1 0 1.0 0.0 INCL_NON_REF_SPLICE RRP15^ENSG00000067533.6 chr1:218331118:+ ARPC4^ENSG00000241553.13 chr3:9804073:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1440:38416:15110 . YES_LDAS 0.0102 GT 1.8892 AG 1.9656 "[""INTERCHROMOSOMAL[chr1--chr3]""]" chr1:218331118-chr3:9804073 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RRP1--ASH2L 1 0 1.0 0.0 ONLY_REF_SPLICE RRP1^ENSG00000160214.13 chr21:43789762:+ ASH2L^ENSG00000129691.16 chr8:38114192:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1172:19631:14101 . YES_LDAS 0.0102 GT 1.7056 AG 1.6895 "[""INTERCHROMOSOMAL[chr21--chr8]""]" chr21:43789762-chr8:38114192 False 0 Read count too low: 1 < 5 FAIL 1
RRN3P3--ECHDC2 1 0 1.0 0.0 INCL_NON_REF_SPLICE RRN3P3^ENSG00000257122.5 chr16:22437482:- ECHDC2^ENSG00000121310.17 chr1:52897185:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1178:33311:13555 . NO_LDAS 0.0102 GT 1.8892 AG 1.9086 "[""INTERCHROMOSOMAL[chr16--chr1]""]" chr16:22437482-chr1:52897185 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RRM2--MRPL38 1 0 1.0 0.0 ONLY_REF_SPLICE RRM2^ENSG00000171848.16 chr2:10127220:+ MRPL38^ENSG00000204316.13 chr17:75901273:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1410:50398:8931 . YES_LDAS 0.0102 GT 1.7819 AG 1.7465 "[""INTERCHROMOSOMAL[chr2--chr17]""]" chr2:10127220-chr17:75901273 False 0 Read count too low: 1 < 5 FAIL 1
RREB1--SORL1 1 0 1.0 0.0 ONLY_REF_SPLICE RREB1^ENSG00000124782.20 chr6:7108060:+ SORL1^ENSG00000137642.13 chr11:121470007:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1255:3370:25900 . NO_LDAS 0.0102 GT 1.3996 AG 1.8062 "[""INTERCHROMOSOMAL[chr6--chr11]""]" chr6:7108060-chr11:121470007 False 0 Read count too low: 1 < 5 FAIL 1
RRBP1--GGCX 1 0 1.0 0.0 INCL_NON_REF_SPLICE RRBP1^ENSG00000125844.16 chr20:17624576:- GGCX^ENSG00000115486.12 chr2:85551875:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1404:30820:19748 . YES_LDAS 0.0102 GT 1.8062 AG 1.8295 "[""INTERCHROMOSOMAL[chr20--chr2]""]" chr20:17624576-chr2:85551875 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RRAS2--TNFRSF13B 1 0 1.0 0.0 ONLY_REF_SPLICE RRAS2^ENSG00000133818.14 chr11:14358763:- TNFRSF13B^ENSG00000240505.9 chr17:16940511:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2166:26767:6199 . YES_LDAS 0.0102 GT 1.9329 AG 1.7819 "[""INTERCHROMOSOMAL[chr11--chr17]""]" chr11:14358763-chr17:16940511 False 0 Read count too low: 1 < 5 FAIL 1
RRAS2--EED 1 0 1.0 0.0 ONLY_REF_SPLICE RRAS2^ENSG00000133818.14 chr11:14358763:- EED^ENSG00000074266.22 chr11:86250296:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2433:39937:5806 . YES_LDAS 0.0102 GT 1.9329 AG 1.9656 "[""INTRACHROMOSOMAL[chr11:71.88Mb]""]" chr11:14358763-chr11:86250296 False 0 Read count too low: 1 < 5 FAIL 1
RRAS2--CRB2 1 0 1.0 0.0 INCL_NON_REF_SPLICE RRAS2^ENSG00000133818.14 chr11:14295768:- CRB2^ENSG00000148204.12 chr9:123377986:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1173:32778:28688 . NO_LDAS 0.0102 GT 1.9329 AG 1.8062 "[""INTERCHROMOSOMAL[chr11--chr9]""]" chr11:14295768-chr9:123377986 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPS9--RAP2C 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPS9^ENSG00000170889.14 chr19:54207537:+ RAP2C^ENSG00000123728.10 chrX:132217774:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1213:43748:24092 . NO_LDAS 0.0102 GT 1.5656 AG 1.5301 "[""INTERCHROMOSOMAL[chr19--chrX]""]" chr19:54207537-chrX:132217774 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPS6KC1--UBA2 1 0 1.0 0.0 ONLY_REF_SPLICE RPS6KC1^ENSG00000136643.12 chr1:213176492:+ UBA2^ENSG00000126261.13 chr19:34431861:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1107:19008:18347 . YES_LDAS 0.0102 GT 1.7465 AG 1.9086 "[""INTERCHROMOSOMAL[chr1--chr19]""]" chr1:213176492-chr19:34431861 False 0 Read count too low: 1 < 5 FAIL 1
RPS6KA2--UQCRFS1 1 0 1.0 0.0 ONLY_REF_SPLICE RPS6KA2^ENSG00000071242.12 chr6:166531232:- UQCRFS1^ENSG00000169021.6 chr19:29208158:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1247:42340:15152 . YES_LDAS 0.0102 GT 1.6895 AG 1.3996 "[""INTERCHROMOSOMAL[chr6--chr19]""]" chr6:166531232-chr19:29208158 False 0 Read count too low: 1 < 5 FAIL 1
RPS6--RPS6P20 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPS6^ENSG00000137154.13 chr9:19378708:- RPS6P20^ENSG00000226356.2 chr12:131292824:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2264:3484:17549 . NO_LDAS 0.0102 GT 1.3996 AG 1.8323 "[""INTERCHROMOSOMAL[chr9--chr12]""]" chr9:19378708-chr12:131292824 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
RPS6--LANCL1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPS6^ENSG00000137154.13 chr9:19376494:- LANCL1^ENSG00000115365.12 chr2:210431835:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2491:4721:12826 . NO_LDAS 0.0102 GT 1.6895 AG 1.9329 "[""INTERCHROMOSOMAL[chr9--chr2]""]" chr9:19376494-chr2:210431835 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPS4Y1--USP32 1 0 1.0 0.0 ONLY_REF_SPLICE RPS4Y1^ENSG00000129824.16 chrY:2845743:+ USP32^ENSG00000170832.13 chr17:60345608:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1324:19049:7039 . YES_LDAS 0.0102 GT 1.5628 AG 1.9329 "[""INTERCHROMOSOMAL[chrY--chr17]""]" chrY:2845743-chr17:60345608 False 0 Read count too low: 1 < 5 FAIL 1
RPS3--ZNF420 1 0 1.0 0.0 ONLY_REF_SPLICE RPS3^ENSG00000149273.15 chr11:75400777:+ ZNF420^ENSG00000197050.11 chr19:37127128:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1262:27940:10893 . YES_LDAS 0.0102 GT 1.9086 AG 1.9656 "[""INTERCHROMOSOMAL[chr11--chr19]""]" chr11:75400777-chr19:37127128 False 0 Read count too low: 1 < 5 FAIL 1
RPS3--MTX1 1 0 0.5 0.0 ONLY_REF_SPLICE RPS3^ENSG00000149273.15 chr11:75400824:+ MTX1^ENSG00000173171.15 chr1:155213237:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1329:15295:28842 . YES_LDAS 0.0051 GT 1.9329 AG 1.7465 "[""INTERCHROMOSOMAL[chr11--chr1]""]" chr11:75400824-chr1:155213237 False 0 Read count too low: 1 < 5 FAIL 1
RPS29--NKX2-1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPS29^ENSG00000213741.11 chr14:49585950:- NKX2-1^ENSG00000136352.19 chr14:36516641:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2346:13127:22032 . NO_LDAS 0.0102 GT 1.8892 AG 1.9656 "[""INTRACHROMOSOMAL[chr14:13.05Mb]""]" chr14:49585950-chr14:36516641 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPS27A--RPL13 1 0 0.5 0.0 INCL_NON_REF_SPLICE RPS27A^ENSG00000143947.15 chr2:55234889:+ RPL13^ENSG00000167526.14 chr16:89562926:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1168:15837:29249 . YES_LDAS 0.0051 GT 0.9183 AG 1.8295 "[""INTERCHROMOSOMAL[chr2--chr16]""]" chr2:55234889-chr16:89562926 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPS23--ITGB3BP 1 0 1.0 0.0 ONLY_REF_SPLICE RPS23^ENSG00000186468.13 chr5:82277693:- ITGB3BP^ENSG00000142856.17 chr1:63454968:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1447:5903:6297 . YES_LDAS 0.0102 GT 1.9086 AG 1.8295 "[""INTERCHROMOSOMAL[chr5--chr1]""]" chr5:82277693-chr1:63454968 False 0 Read count too low: 1 < 5 FAIL 1
RPS15A--AC136431.2 1 0 1.0 0.0 ONLY_REF_SPLICE RPS15A^ENSG00000134419.15 chr16:18784738:- AC136431.2^ENSG00000287905.1 chr16:16633467:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1468:29914:18067 . YES_LDAS 0.0102 GT 1.9329 AG 1.8256 "[""INTRACHROMOSOMAL[chr16:2.15Mb]""]" chr16:18784738-chr16:16633467 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
RPS15--IRAK1 1 0 1.0 0.0 ONLY_REF_SPLICE RPS15^ENSG00000115268.10 chr19:1438892:+ IRAK1^ENSG00000184216.14 chrX:154014278:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1344:44217:27567 . YES_LDAS 0.0102 GT 1.9899 AG 1.8323 "[""INTERCHROMOSOMAL[chr19--chrX]""]" chr19:1438892-chrX:154014278 False 0 Read count too low: 1 < 5 FAIL 1
RPS13--ZNF431 1 0 0.5 0.0 ONLY_REF_SPLICE RPS13^ENSG00000110700.7 chr11:17077168:- ZNF431^ENSG00000196705.8 chr19:21189865:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1291:10506:12308 . YES_LDAS 0.0051 GT 1.8892 AG 1.7232 "[""INTERCHROMOSOMAL[chr11--chr19]""]" chr11:17077168-chr19:21189865 False 0 Read count too low: 1 < 5 FAIL 1
RPS12P27--AC108161.1 1 0 0.5 0.0 INCL_NON_REF_SPLICE RPS12P27^ENSG00000240435.2 chr16:68209521:+ AC108161.1^ENSG00000226439.3 chr4:61775837:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2132:37963:1743 . NO_LDAS 0.0051 GT 1.9656 AG 1.9086 "[""INTERCHROMOSOMAL[chr16--chr4]""]" chr16:68209521-chr4:61775837 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPRD1B--MTRNR2L13 1 0 0.17 0.0 INCL_NON_REF_SPLICE RPRD1B^ENSG00000101413.12 chr20:38034098:+ MTRNR2L13^ENSG00000270394.4 chr4:116299364:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2335:34881:11341 . NO_LDAS 0.0017 GT 1.8256 AG 1.6402 "[""INTERCHROMOSOMAL[chr20--chr4]""]" chr20:38034098-chr4:116299364 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPRD1A--MIB1 1 0 1.0 0.0 ONLY_REF_SPLICE RPRD1A^ENSG00000141425.18 chr18:36067254:- MIB1^ENSG00000101752.12 chr18:21838365:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1473:51101:22481 . YES_LDAS 0.0102 GT 1.6402 AG 1.7968 "[""INTRACHROMOSOMAL[chr18:14.11Mb]""]" chr18:36067254-chr18:21838365 False 0 Read count too low: 1 < 5 FAIL 1
RPN1--SEC61B 1 0 1.0 0.0 ONLY_REF_SPLICE RPN1^ENSG00000163902.12 chr3:128622164:- SEC61B^ENSG00000106803.10 chr9:99222546:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2376:8427:16357 . YES_LDAS 0.0102 GT 1.9656 AG 1.5546 "[""INTERCHROMOSOMAL[chr3--chr9]""]" chr3:128622164-chr9:99222546 False 0 Read count too low: 1 < 5 FAIL 1
RPLP0P7--AC020658.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPLP0P7^ENSG00000238069.1 chr2:156777937:- AC020658.1^ENSG00000244705.1 chr15:40313094:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2140:30698:6030 . NO_LDAS 0.0102 GT 1.8892 AG 1.8062 "[""INTERCHROMOSOMAL[chr2--chr15]""]" chr2:156777937-chr15:40313094 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPL9--SEC31A 1 0 1.0 0.0 ONLY_REF_SPLICE RPL9^ENSG00000163682.17 chr4:39457586:- SEC31A^ENSG00000138674.17 chr4:82819253:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2380:24372:19538 . YES_LDAS 0.0102 GT 1.9329 AG 1.5656 "[""INTRACHROMOSOMAL[chr4:43.36Mb]""]" chr4:39457586-chr4:82819253 False 0 Read count too low: 1 < 5 FAIL 1
RPL7A--TMEM258 1 0 1.0 0.0 ONLY_REF_SPLICE RPL7A^ENSG00000148303.17 chr9:133349042:+ TMEM258^ENSG00000134825.16 chr11:61790602:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1205:42170:6535 . YES_LDAS 0.0102 GT 1.8062 AG 1.8892 "[""INTERCHROMOSOMAL[chr9--chr11]""]" chr9:133349042-chr11:61790602 False 0 Read count too low: 1 < 5 FAIL 1
RPL7A--AL133406.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPL7A^ENSG00000148303.17 chr9:133351330:+ AL133406.1^ENSG00000216639.1 chr6:105298873:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1363:46490:17408 . NO_LDAS 0.0102 GC 1.8062 AG 1.7819 "[""INTERCHROMOSOMAL[chr9--chr6]""]" chr9:133351330-chr6:105298873 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPL4--RTTN 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPL4^ENSG00000174444.15 chr15:66501375:- RTTN^ENSG00000176225.15 chr18:70020792:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1388:16614:24260 . YES_LDAS 0.0102 GT 1.9086 AG 1.9656 "[""INTERCHROMOSOMAL[chr15--chr18]""]" chr15:66501375-chr18:70020792 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPL4--H3-3A 1 0 0.25 0.0 INCL_NON_REF_SPLICE RPL4^ENSG00000174444.15 chr15:66502705:- H3-3A^ENSG00000163041.13 chr1:226064370:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2109:30472:9141 . YES_LDAS 0.0026 GT 1.7465 AG 1.8892 "[""INTERCHROMOSOMAL[chr15--chr1]""]" chr15:66502705-chr1:226064370 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPL39--UVRAG 1 0 1.0 0.0 ONLY_REF_SPLICE RPL39^ENSG00000198918.8 chrX:119791574:- UVRAG^ENSG00000198382.9 chr11:75911954:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1202:29080:13877 . YES_LDAS 0.0102 GT 1.7465 AG 1.8892 "[""INTERCHROMOSOMAL[chrX--chr11]""]" chrX:119791574-chr11:75911954 False 0 Read count too low: 1 < 5 FAIL 1
RPL39--KATNAL2 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPL39^ENSG00000198918.8 chrX:119786534:- KATNAL2^ENSG00000167216.17 chr18:46946232:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2386:33093:12000 . NO_LDAS 0.0102 GT 1.8323 AG 1.7465 "[""INTERCHROMOSOMAL[chrX--chr18]""]" chrX:119786534-chr18:46946232 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPL38--PKD2 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPL38^ENSG00000172809.13 chr17:74209257:+ PKD2^ENSG00000118762.8 chr4:88007899:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2224:41329:8945 . YES_LDAS 0.0102 GT 1.7819 AG 1.9086 "[""INTERCHROMOSOMAL[chr17--chr4]""]" chr17:74209257-chr4:88007899 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPL31--RHOT1P1 1 0 0.5 0.0 INCL_NON_REF_SPLICE RPL31^ENSG00000071082.11 chr2:101006075:+ RHOT1P1^ENSG00000266145.1 chr18:14222049:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2302:2974:5736 . YES_LDAS 0.0051 GT 1.7465 AG 1.9086 "[""INTERCHROMOSOMAL[chr2--chr18]""]" chr2:101006075-chr18:14222049 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPL27A--AGO3 1 0 1.0 0.0 ONLY_REF_SPLICE RPL27A^ENSG00000166441.13 chr11:8684892:+ AGO3^ENSG00000126070.20 chr1:36027114:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2347:51304:15433 . YES_LDAS 0.0102 GT 1.7968 AG 1.9899 "[""INTERCHROMOSOMAL[chr11--chr1]""]" chr11:8684892-chr1:36027114 False 0 Read count too low: 1 < 5 FAIL 1
RPL27--KLHL11 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPL27^ENSG00000131469.15 chr17:43002783:+ KLHL11^ENSG00000178502.6 chr17:41855018:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1351:5579:8286 . YES_LDAS 0.0102 GT 1.7819 AG 1.8323 "[""INTRACHROMOSOMAL[chr17:1.13Mb]""]" chr17:43002783-chr17:41855018 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPL26L1--RPL26 1 0 0.17 0.0 INCL_NON_REF_SPLICE RPL26L1^ENSG00000037241.7 chr5:172968497:+ RPL26^ENSG00000161970.15 chr17:8379896:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2283:9292:14354 . NO_LDAS 0.0017 GT 1.8892 AG 1.9656 "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr5--chr17]""]" chr5:172968497-chr17:8379896 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
RPL23AP53--SEPTIN14 1 0 1.0 0.0 ONLY_REF_SPLICE RPL23AP53^ENSG00000223508.5 chr8:232129:- SEPTIN14^ENSG00000154997.9 chr7:55796092:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2186:22479:11187 . NO_LDAS 0.0102 GT 1.9086 AG 1.9899 "[""INTERCHROMOSOMAL[chr8--chr7]""]" chr8:232129-chr7:55796092 False 0 Read count too low: 1 < 5 FAIL 1
RPL10P16--TRIP12 1 0 0.5 0.0 INCL_NON_REF_SPLICE RPL10P16^ENSG00000178464.6 chr19:12643722:- TRIP12^ENSG00000153827.14 chr2:229859574:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2432:11719:4769 . YES_LDAS 0.0051 GC 1.9656 AG 1.9899 "[""INTERCHROMOSOMAL[chr19--chr2]""]" chr19:12643722-chr2:229859574 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPL10--EFCAB13 1 0 1.0 0.0 ONLY_REF_SPLICE RPL10^ENSG00000147403.18 chrX:154399941:+ EFCAB13^ENSG00000178852.16 chr17:47328269:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1385:24518:22032 . YES_LDAS 0.0102 GT 1.8295 AG 1.8892 "[""INTERCHROMOSOMAL[chrX--chr17]""]" chrX:154399941-chr17:47328269 False 0 Read count too low: 1 < 5 FAIL 1
RPA1--NCAPD3 1 0 1.0 0.0 ONLY_REF_SPLICE RPA1^ENSG00000132383.12 chr17:1853189:+ NCAPD3^ENSG00000151503.13 chr11:134210454:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2490:14850:25241 . YES_LDAS 0.0102 GT 1.9656 AG 1.9899 "[""INTERCHROMOSOMAL[chr17--chr11]""]" chr17:1853189-chr11:134210454 False 0 Read count too low: 1 < 5 FAIL 1
RNVU1-27--EXOC2 1 0 1.0 0.0 INCL_NON_REF_SPLICE RNVU1-27^ENSG00000274210.1 chr1:148522796:+ EXOC2^ENSG00000112685.14 chr6:532610:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2325:46652:8020 . YES_LDAS 0.0102 GT 1.8892 AG 1.9899 "[""INTERCHROMOSOMAL[chr1--chr6]""]" chr1:148522796-chr6:532610 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RNVU1-27--B3GNTL1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RNVU1-27^ENSG00000274210.1 chr1:148522796:+ B3GNTL1^ENSG00000175711.8 chr17:83048785:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1379:22155:23322 . YES_LDAS 0.0102 GT 1.8892 AG 1.5219 "[""INTERCHROMOSOMAL[chr1--chr17]""]" chr1:148522796-chr17:83048785 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RNF41--EVPLL 1 0 1.0 0.0 INCL_NON_REF_SPLICE RNF41^ENSG00000181852.18 chr12:56208163:- EVPLL^ENSG00000214860.5 chr17:18383114:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2346:15198:25255 . NO_LDAS 0.0102 GT 1.7465 AG 1.7968 "[""INTERCHROMOSOMAL[chr12--chr17]""]" chr12:56208163-chr17:18383114 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RNF214--LBX1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RNF214^ENSG00000167257.11 chr11:117246948:+ LBX1^ENSG00000138136.6 chr10:101229306:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1302:8281:26895 . NO_LDAS 0.0102 GT 1.5628 AG 0.9183 "[""INTERCHROMOSOMAL[chr11--chr10]""]" chr11:117246948-chr10:101229306 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RNF19A--ZDHHC7 1 0 1.0 0.0 ONLY_REF_SPLICE RNF19A^ENSG00000034677.13 chr8:100309867:- ZDHHC7^ENSG00000153786.13 chr16:84981994:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2418:28166:18599 . YES_LDAS 0.0102 GT 1.8256 AG 1.8256 "[""INTERCHROMOSOMAL[chr8--chr16]""]" chr8:100309867-chr16:84981994 False 0 Read count too low: 1 < 5 FAIL 1
RNF168--PCYT1A 1 0 1.0 0.0 ONLY_REF_SPLICE RNF168^ENSG00000163961.4 chr3:196502873:- PCYT1A^ENSG00000161217.12 chr3:196248323:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1138:35439:14550 . YES_LDAS 0.0102 GT 1.7056 AG 1.9219 "[""INTRACHROMOSOMAL[chr3:0.18Mb]""]" chr3:196502873-chr3:196248323 False 0 Read count too low: 1 < 5 FAIL 1
RNF111--EML2 1 0 1.0 0.0 ONLY_REF_SPLICE RNF111^ENSG00000157450.16 chr15:59067083:+ EML2^ENSG00000125746.18 chr19:45619191:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1472:21799:9562 . YES_LDAS 0.0102 GT 1.9219 AG 1.7968 "[""INTERCHROMOSOMAL[chr15--chr19]""]" chr15:59067083-chr19:45619191 False 0 Read count too low: 1 < 5 FAIL 1
RNF10--CIAPIN1 1 0 1.0 0.0 ONLY_REF_SPLICE RNF10^ENSG00000022840.16 chr12:120552698:+ CIAPIN1^ENSG00000005194.15 chr16:57429280:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1118:46700:6339 . YES_LDAS 0.0102 GT 1.9329 AG 1.9329 "[""INTERCHROMOSOMAL[chr12--chr16]""]" chr12:120552698-chr16:57429280 False 0 Read count too low: 1 < 5 FAIL 1
RN7SL832P--RAB1A 1 0 1.0 0.0 INCL_NON_REF_SPLICE RN7SL832P^ENSG00000243819.4 chr2:10690579:+ RAB1A^ENSG00000138069.18 chr2:65104806:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2461:49669:12602 . NO_LDAS 0.0102 GT 1.7819 AG 1.5329 "[""INTRACHROMOSOMAL[chr2:54.38Mb]""]" chr2:10690579-chr2:65104806 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RN7SL229P--RN7SL297P 1 0 1.0 0.0 INCL_NON_REF_SPLICE RN7SL229P^ENSG00000242811.3 chr3:180736553:- RN7SL297P^ENSG00000240183.3 chr2:111930318:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2336:33611:12952 . YES_LDAS 0.0102 GC 1.9219 AG 1.5656 "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr3--chr2]""]" chr3:180736553-chr2:111930318 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
RN7SKP134--RN7SKP173 1 0 0.33 0.0 INCL_NON_REF_SPLICE RN7SKP134^ENSG00000200830.1 chr12:14553729:- RN7SKP173^ENSG00000199691.1 chr20:38761716:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1210:51247:20379 . YES_LDAS 0.0034 GT 1.7465 AG 1.9899 "[""INTERCHROMOSOMAL[chr12--chr20]""]" chr12:14553729-chr20:38761716 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RMND1--PPIL4 1 0 1.0 0.0 ONLY_REF_SPLICE RMND1^ENSG00000155906.19 chr6:151417279:- PPIL4^ENSG00000131013.4 chr6:149535738:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2346:13912:13667 . YES_LDAS 0.0102 GT 1.8323 AG 1.5656 "[""INTRACHROMOSOMAL[chr6:1.86Mb]""]" chr6:151417279-chr6:149535738 False 0 Read count too low: 1 < 5 FAIL 1
RMDN3--TMEM132C 1 0 1.0 0.0 INCL_NON_REF_SPLICE RMDN3^ENSG00000137824.16 chr15:40737124:- TMEM132C^ENSG00000181234.9 chr12:128616288:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2157:51846:27777 . YES_LDAS 0.0102 GT 1.8323 AG 1.9656 "[""INTERCHROMOSOMAL[chr15--chr12]""]" chr15:40737124-chr12:128616288 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RIPK1--AKT2 1 0 1.0 0.0 ONLY_REF_SPLICE RIPK1^ENSG00000137275.16 chr6:3064059:+ AKT2^ENSG00000105221.18 chr19:40265351:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2287:48966:23069 . YES_LDAS 0.0102 GT 1.7968 AG 1.8892 "[""INTERCHROMOSOMAL[chr6--chr19]""]" chr6:3064059-chr19:40265351 False 0 Read count too low: 1 < 5 FAIL 1
RIOX1--NACC2 1 0 1.0 0.0 INCL_NON_REF_SPLICE RIOX1^ENSG00000170468.8 chr14:73491413:+ NACC2^ENSG00000148411.8 chr9:136050317:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1370:6477:8244 . NO_LDAS 0.0102 GT 1.231 AG 1.5058 "[""INTERCHROMOSOMAL[chr14--chr9]""]" chr14:73491413-chr9:136050317 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RIMKLB--IPO4 1 0 1.0 0.0 ONLY_REF_SPLICE RIMKLB^ENSG00000166532.16 chr12:8773466:+ IPO4^ENSG00000196497.17 chr14:24181617:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1450:14648:13933 . YES_LDAS 0.0102 GT 1.8892 AG 1.8256 "[""INTERCHROMOSOMAL[chr12--chr14]""]" chr12:8773466-chr14:24181617 False 0 Read count too low: 1 < 5 FAIL 1
RIC1--SENP6 1 0 1.0 0.0 ONLY_REF_SPLICE RIC1^ENSG00000107036.12 chr9:5656690:+ SENP6^ENSG00000112701.18 chr6:75695804:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1465:25246:7880 . NO_LDAS 0.0102 GT 1.9086 AG 1.8892 "[""INTERCHROMOSOMAL[chr9--chr6]""]" chr9:5656690-chr6:75695804 False 0 Read count too low: 1 < 5 FAIL 1
RIC1--JAK2 1 0 1.0 0.0 ONLY_REF_SPLICE RIC1^ENSG00000107036.12 chr9:5629453:+ JAK2^ENSG00000096968.14 chr9:5021963:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1230:44524:6941 . YES_LDAS 0.0102 GT 1.9899 AG 1.8892 "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr9:0.50Mb]""]" chr9:5629453-chr9:5021963 False 0 Read count too low: 1 < 5 FAIL 1
RHOXF1-AS1--H2BW3P 1 0 1.0 0.0 INCL_NON_REF_SPLICE RHOXF1-AS1^ENSG00000258545.6 chrX:120139119:+ H2BW3P^ENSG00000235946.1 chrX:104062987:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1323:27891:22467 . YES_LDAS 0.0102 GT 1.9656 AG 1.8295 "[""INTRACHROMOSOMAL[chrX:15.97Mb]""]" chrX:120139119-chrX:104062987 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RHOA--SYNE3 1 0 1.0 0.0 INCL_NON_REF_SPLICE RHOA^ENSG00000067560.14 chr3:49375430:- SYNE3^ENSG00000176438.12 chr14:95408857:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1228:39468:20379 . NO_LDAS 0.0102 GT 1.7056 AG 1.7819 "[""INTERCHROMOSOMAL[chr3--chr14]""]" chr3:49375430-chr14:95408857 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RHOA--QRICH1 1 0 1.0 0.0 ONLY_REF_SPLICE RHOA^ENSG00000067560.14 chr3:49411820:- QRICH1^ENSG00000198218.11 chr3:49077038:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2280:29509:1981 . NO_LDAS 0.0102 GT 1.9086 AG 1.9086 "[""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr3:0.26Mb]""]" chr3:49411820-chr3:49077038 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
RHBDF2--TMEM219 1 0 1.0 0.0 ONLY_REF_SPLICE RHBDF2^ENSG00000129667.13 chr17:76481375:- TMEM219^ENSG00000149932.17 chr16:29963107:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2435:22083:12770 . YES_LDAS 0.0102 GT 1.9656 AG 1.7968 "[""INTERCHROMOSOMAL[chr17--chr16]""]" chr17:76481375-chr16:29963107 False 0 Read count too low: 1 < 5 FAIL 1
RHBDD3--REST 1 0 1.0 0.0 INCL_NON_REF_SPLICE RHBDD3^ENSG00000100263.14 chr22:29259780:- REST^ENSG00000084093.19 chr4:56930881:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2450:42777:8062 . YES_LDAS 0.0102 GT 1.7968 AG 1.9219 "[""INTERCHROMOSOMAL[chr22--chr4]""]" chr22:29259780-chr4:56930881 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RHBDD3--AHSA2P 1 0 1.0 0.0 ONLY_REF_SPLICE RHBDD3^ENSG00000100263.14 chr22:29265479:- AHSA2P^ENSG00000173209.23 chr2:61178981:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2101:28004:14984 . NO_LDAS 0.0102 GT 1.8323 AG 1.7465 "[""INTERCHROMOSOMAL[chr22--chr2]""]" chr22:29265479-chr2:61178981 False 0 Read count too low: 1 < 5 FAIL 1
RHBDD1--AC073508.3 1 0 1.0 0.0 INCL_NON_REF_SPLICE RHBDD1^ENSG00000144468.17 chr2:226865126:+ AC073508.3^ENSG00000278834.1 chr17:40648834:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1349:42696:25465 . NO_LDAS 0.0102 GT 1.8892 AG 1.9329 "[""INTERCHROMOSOMAL[chr2--chr17]""]" chr2:226865126-chr17:40648834 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RGS16--MTMR9 1 0 1.0 0.0 INCL_NON_REF_SPLICE RGS16^ENSG00000143333.7 chr1:182603248:- MTMR9^ENSG00000104643.10 chr8:11309670:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1148:36475:20351 . YES_LDAS 0.0102 GT 1.8295 AG 1.9086 "[""INTERCHROMOSOMAL[chr1--chr8]""]" chr1:182603248-chr8:11309670 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RFX5--TMEM80 1 0 1.0 0.0 ONLY_REF_SPLICE RFX5^ENSG00000143390.18 chr1:151344417:- TMEM80^ENSG00000177042.15 chr11:700142:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1234:36531:10108 . YES_LDAS 0.0102 GT 1.7819 AG 1.5628 "[""INTERCHROMOSOMAL[chr1--chr11]""]" chr1:151344417-chr11:700142 False 0 Read count too low: 1 < 5 FAIL 1
RFX5--MAD2L2 1 0 1.0 0.0 ONLY_REF_SPLICE RFX5^ENSG00000143390.18 chr1:151343074:- MAD2L2^ENSG00000116670.15 chr1:11675731:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1269:41879:22425 . YES_LDAS 0.0102 GT 1.9086 AG 1.9656 "[""INTRACHROMOSOMAL[chr1:139.65Mb]""]" chr1:151343074-chr1:11675731 False 0 Read count too low: 1 < 5 FAIL 1
RFX3--RFX3-AS1 1 0 1.0 0.0 ONLY_REF_SPLICE RFX3^ENSG00000080298.15 chr9:3248032:- RFX3-AS1^ENSG00000232104.3 chr9:3546778:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2155:18758:6647 . YES_LDAS 0.0102 GT 1.8295 AG 1.8892 "[""DEEPEST2019"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr9:0.00Mb]"",""LOCAL_INVERSION:-:+:[719]""]" chr9:3248032-chr9:3546778 False 0 Read count too low: 1 < 5 FAIL 1
RFTN1--SPG11 1 0 1.0 0.0 ONLY_REF_SPLICE RFTN1^ENSG00000131378.14 chr3:16370076:- SPG11^ENSG00000104133.15 chr15:44598373:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2495:46531:10248 . YES_LDAS 0.0102 GT 1.585 AG 1.7465 "[""INTERCHROMOSOMAL[chr3--chr15]""]" chr3:16370076-chr15:44598373 False 0 Read count too low: 1 < 5 FAIL 1
RFTN1--KSR1 1 0 1.0 0.0 ONLY_REF_SPLICE RFTN1^ENSG00000131378.14 chr3:16317175:- KSR1^ENSG00000141068.14 chr17:27588475:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2171:37510:18529 . NO_LDAS 0.0102 GT 1.6402 AG 1.9656 "[""INTERCHROMOSOMAL[chr3--chr17]""]" chr3:16317175-chr17:27588475 False 0 Read count too low: 1 < 5 FAIL 1
RFTN1--CIR1 1 0 1.0 0.0 ONLY_REF_SPLICE RFTN1^ENSG00000131378.14 chr3:16493725:- CIR1^ENSG00000138433.16 chr2:174351725:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1378:10595:2794 . YES_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTERCHROMOSOMAL[chr3--chr2]""]" chr3:16493725-chr2:174351725 False 0 Read count too low: 1 < 5 FAIL 1
REXO1--ZMPSTE24 1 0 0.17 0.0 INCL_NON_REF_SPLICE REXO1^ENSG00000079313.15 chr19:1828588:- ZMPSTE24^ENSG00000084073.10 chr1:40259468:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2189:45633:14045 . NO_LDAS 0.0017 GC 1.4256 AG 1.371 "[""INTERCHROMOSOMAL[chr19--chr1]""]" chr19:1828588-chr1:40259468 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
REXO1--ZMPSTE24 1 0 0.17 0.0 INCL_NON_REF_SPLICE REXO1^ENSG00000079313.15 chr19:1828588:- ZMPSTE24^ENSG00000084073.10 chr1:40258125:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2189:45633:14045 . NO_LDAS 0.0017 GC 1.4256 AG 1.371 "[""INTERCHROMOSOMAL[chr19--chr1]""]" chr19:1828588-chr1:40258125 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
REV1--EIF5B 1 0 1.0 0.0 ONLY_REF_SPLICE REV1^ENSG00000135945.10 chr2:99489817:- EIF5B^ENSG00000158417.11 chr2:99360236:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2347:1680:3522 . NO_LDAS 0.0102 GT 1.4566 AG 1.8892 "[""INTRACHROMOSOMAL[chr2:0.00Mb]"",""NEIGHBORS_OVERLAP:-:+:[851]""]" chr2:99489817-chr2:99360236 False 0 Read count too low: 1 < 5 FAIL 1
RETSAT--IMMT 1 0 1.0 0.0 ONLY_REF_SPLICE RETSAT^ENSG00000042445.14 chr2:85354336:- IMMT^ENSG00000132305.21 chr2:86153574:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1384:10514:12210 . NO_LDAS 0.0102 GT 1.9219 AG 1.8892 "[""INTRACHROMOSOMAL[chr2:0.79Mb]""]" chr2:85354336-chr2:86153574 False 0 Read count too low: 1 < 5 FAIL 1
RETREG3--HSD17B7 1 0 0.5 0.0 ONLY_REF_SPLICE RETREG3^ENSG00000141699.11 chr17:42585125:- HSD17B7^ENSG00000132196.15 chr1:162799743:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1102:18903:7011 . YES_LDAS 0.0051 GT 1.5329 AG 1.8892 "[""INTERCHROMOSOMAL[chr17--chr1]""]" chr17:42585125-chr1:162799743 False 0 Read count too low: 1 < 5 FAIL 1
REPS2--PSEN2 1 0 1.0 0.0 ONLY_REF_SPLICE REPS2^ENSG00000169891.18 chrX:17025185:+ PSEN2^ENSG00000143801.18 chr1:226908522:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2414:22163:22327 . YES_LDAS 0.0102 GT 1.8892 AG 1.7819 "[""INTERCHROMOSOMAL[chrX--chr1]""]" chrX:17025185-chr1:226908522 False 0 Read count too low: 1 < 5 FAIL 1
RELT--CLNS1A 1 0 1.0 0.0 ONLY_REF_SPLICE RELT^ENSG00000054967.13 chr11:73376499:+ CLNS1A^ENSG00000074201.9 chr11:77629899:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2186:23814:3915 . YES_LDAS 0.0102 GT 1.4295 AG 1.5656 "[""INTRACHROMOSOMAL[chr11:4.12Mb]""]" chr11:73376499-chr11:77629899 False 0 Read count too low: 1 < 5 FAIL 1
RELA--EIF2S2 1 0 0.33 0.0 INCL_NON_REF_SPLICE RELA^ENSG00000173039.19 chr11:65658718:- EIF2S2^ENSG00000125977.7 chr20:34105385:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1404:45123:10276 . NO_LDAS 0.0034 GT 1.6895 AG 1.6402 "[""INTERCHROMOSOMAL[chr11--chr20]""]" chr11:65658718-chr20:34105385 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RDH11--GTF2I 1 0 1.0 0.0 ONLY_REF_SPLICE RDH11^ENSG00000072042.13 chr14:67690212:- GTF2I^ENSG00000263001.7 chr7:74689124:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1220:5409:2387 . YES_LDAS 0.0102 GT 1.8062 AG 1.9329 "[""INTERCHROMOSOMAL[chr14--chr7]""]" chr14:67690212-chr7:74689124 False 0 Read count too low: 1 < 5 FAIL 1
RCOR1--AC010883.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RCOR1^ENSG00000089902.10 chr14:102593325:+ AC010883.1^ENSG00000234936.1 chr2:43232735:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1353:21193:19692 . YES_LDAS 0.0102 GT 1.7232 AG 1.9329 "[""INTERCHROMOSOMAL[chr14--chr2]""]" chr14:102593325-chr2:43232735 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RCE1--BRPF3 1 0 1.0 0.0 INCL_NON_REF_SPLICE RCE1^ENSG00000173653.8 chr11:66843861:+ BRPF3^ENSG00000096070.19 chr6:36200704:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1230:13734:1084 . NO_LDAS 0.0102 GT 1.8892 AG 1.4566 "[""INTERCHROMOSOMAL[chr11--chr6]""]" chr11:66843861-chr6:36200704 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RBMXL1--DOK3 1 0 1.0 0.0 INCL_NON_REF_SPLICE RBMXL1^ENSG00000213516.10 chr1:88983253:- DOK3^ENSG00000146094.16 chr5:177508467:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2169:44799:26250 . YES_LDAS 0.0102 GT 1.5656 AG 1.6729 "[""INTERCHROMOSOMAL[chr1--chr5]""]" chr1:88983253-chr5:177508467 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RBM4B--LINC00265 1 0 0.5 0.0 ONLY_REF_SPLICE RBM4B^ENSG00000173914.12 chr11:66676668:- LINC00265^ENSG00000188185.13 chr7:39744292:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2169:16153:26713 . NO_LDAS 0.0051 GT 1.9219 AG 1.8892 "[""INTERCHROMOSOMAL[chr11--chr7]""]" chr11:66676668-chr7:39744292 False 0 Read count too low: 1 < 5 FAIL 1
RBM4--PTPN22 1 0 1.0 0.0 INCL_NON_REF_SPLICE RBM4^ENSG00000173933.21 chr11:66666500:+ PTPN22^ENSG00000134242.16 chr1:113852104:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1121:21346:25704 . YES_LDAS 0.0102 GT 1.9899 AG 1.8892 "[""INTERCHROMOSOMAL[chr11--chr1]""]" chr11:66666500-chr1:113852104 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RBM4--LINC00265 1 0 0.5 0.0 ONLY_REF_SPLICE RBM4^ENSG00000173933.21 chr11:66640123:+ LINC00265^ENSG00000188185.13 chr7:39744292:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2169:16153:26713 . NO_LDAS 0.0051 GT 1.9219 AG 1.8892 "[""INTERCHROMOSOMAL[chr11--chr7]""]" chr11:66640123-chr7:39744292 False 0 Read count too low: 1 < 5 FAIL 1
RBM39--AC064799.1 1 0 0.25 0.0 INCL_NON_REF_SPLICE RBM39^ENSG00000131051.24 chr20:35713019:- AC064799.1^ENSG00000212664.5 chr15:71341205:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1195:17083:24681 . YES_LDAS 0.0026 GT 1.6895 AG 1.7232 "[""INTERCHROMOSOMAL[chr20--chr15]""]" chr20:35713019-chr15:71341205 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RBM26--SLAIN1 1 0 1.0 0.0 ONLY_REF_SPLICE RBM26^ENSG00000139746.16 chr13:79368730:- SLAIN1^ENSG00000139737.22 chr13:77760828:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2293:28045:19230 . YES_LDAS 0.0102 GT 1.8256 AG 1.9219 "[""INTRACHROMOSOMAL[chr13:1.55Mb]""]" chr13:79368730-chr13:77760828 False 0 Read count too low: 1 < 5 FAIL 1
RBM14--PPP6R3 1 0 1.0 0.0 ONLY_REF_SPLICE RBM14^ENSG00000239306.5 chr11:66617057:+ PPP6R3^ENSG00000110075.15 chr11:68519501:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1237:49354:18726 . YES_LDAS 0.0102 GT 1.7465 AG 1.8892 "[""INTRACHROMOSOMAL[chr11:1.83Mb]""]" chr11:66617057-chr11:68519501 False 0 Read count too low: 1 < 5 FAIL 1
RBL2--ACAP2 1 0 1.0 0.0 ONLY_REF_SPLICE RBL2^ENSG00000103479.17 chr16:53434796:+ ACAP2^ENSG00000114331.15 chr3:195345317:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1316:17455:9351 . YES_LDAS 0.0102 GT 1.9329 AG 1.9329 "[""INTERCHROMOSOMAL[chr16--chr3]""]" chr16:53434796-chr3:195345317 False 0 Read count too low: 1 < 5 FAIL 1
RBBP8--SMAD2 1 0 1.0 0.0 ONLY_REF_SPLICE RBBP8^ENSG00000101773.19 chr18:22936960:+ SMAD2^ENSG00000175387.16 chr18:47870564:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1412:51150:17492 . YES_LDAS 0.0102 GT 1.6402 AG 1.9329 "[""INTRACHROMOSOMAL[chr18:24.78Mb]""]" chr18:22936960-chr18:47870564 False 0 Read count too low: 1 < 5 FAIL 1
RB1--ITM2B 1 0 1.0 0.0 ONLY_REF_SPLICE RB1^ENSG00000139687.16 chr13:48307406:+ ITM2B^ENSG00000136156.15 chr13:48261139:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2318:36758:27371 . NO_LDAS 0.0102 GT 1.5058 AG 1.9329 "[""GTEx_recurrent_StarF2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr13:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[33387]""]" chr13:48307406-chr13:48261139 False 0 Excluded annotation pattern: GTEx_recurrent_StarF2019 FAIL 1
RB1--INPP5D 1 0 1.0 0.0 ONLY_REF_SPLICE RB1^ENSG00000139687.16 chr13:48381443:+ INPP5D^ENSG00000168918.14 chr2:233079335:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1129:27600:15208 . YES_LDAS 0.0102 GT 1.9086 AG 1.9086 "[""INTERCHROMOSOMAL[chr13--chr2]""]" chr13:48381443-chr2:233079335 False 0 Read count too low: 1 < 5 FAIL 1
RB1--BMPR2 1 0 1.0 0.0 INCL_NON_REF_SPLICE RB1^ENSG00000139687.16 chr13:48304049:+ BMPR2^ENSG00000204217.15 chr2:202376513:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2308:26184:27974 . YES_LDAS 0.0102 GT 1.7465 AG 0.9183 "[""INTERCHROMOSOMAL[chr13--chr2]""]" chr13:48304049-chr2:202376513 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RASGRP3--NBAS 1 0 1.0 0.0 ONLY_REF_SPLICE RASGRP3^ENSG00000152689.18 chr2:33476707:+ NBAS^ENSG00000151779.13 chr2:15539356:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1423:32074:4489 . YES_LDAS 0.0102 GT 1.5628 AG 1.9086 "[""INTRACHROMOSOMAL[chr2:17.87Mb]""]" chr2:33476707-chr2:15539356 False 0 Read count too low: 1 < 5 FAIL 1
RASGEF1A--TSFM 1 0 1.0 0.0 INCL_NON_REF_SPLICE RASGEF1A^ENSG00000198915.12 chr10:43196013:- TSFM^ENSG00000123297.20 chr12:57792986:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1298:11218:1266 . NO_LDAS 0.0102 GT 0.8366 AG 1.8295 "[""INTERCHROMOSOMAL[chr10--chr12]""]" chr10:43196013-chr12:57792986 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RARA--HOXB3 1 0 1.0 0.0 INCL_NON_REF_SPLICE RARA^ENSG00000131759.18 chr17:40355308:+ HOXB3^ENSG00000120093.12 chr17:48590181:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1122:50422:1575 . NO_LDAS 0.0102 GC 1.8892 AG 1.7819 "[""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr17:8.19Mb]""]" chr17:40355308-chr17:48590181 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RAPGEF4--TAOK3 1 0 1.0 0.0 INCL_NON_REF_SPLICE RAPGEF4^ENSG00000091428.18 chr2:173014533:+ TAOK3^ENSG00000135090.14 chr12:118161846:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1205:7472:5624 . NO_LDAS 0.0102 GT 1.6402 AG 1.6729 "[""INTERCHROMOSOMAL[chr2--chr12]""]" chr2:173014533-chr12:118161846 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RAPGEF3--TAP2 1 0 1.0 0.0 INCL_NON_REF_SPLICE RAPGEF3^ENSG00000079337.16 chr12:47751414:- TAP2^ENSG00000204267.16 chr6:32830305:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2191:44646:11495 . NO_LDAS 0.0102 GT 1.8892 AG 1.8062 "[""INTERCHROMOSOMAL[chr12--chr6]""]" chr12:47751414-chr6:32830305 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RAP2B--LINC01629 1 0 1.0 0.0 INCL_NON_REF_SPLICE RAP2B^ENSG00000181467.5 chr3:153162589:+ LINC01629^ENSG00000258602.1 chr14:76965793:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1405:26742:25409 . NO_LDAS 0.0102 GT 1.5301 AG 1.5329 "[""INTERCHROMOSOMAL[chr3--chr14]""]" chr3:153162589-chr14:76965793 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RANBP3--SLC25A25 1 0 1.0 0.0 INCL_NON_REF_SPLICE RANBP3^ENSG00000031823.14 chr19:5916946:- SLC25A25^ENSG00000148339.12 chr9:128101139:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1384:1599:3074 . YES_LDAS 0.0102 GT 1.9329 AG 1.7819 "[""INTERCHROMOSOMAL[chr19--chr9]""]" chr19:5916946-chr9:128101139 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RALGPS2-AS1--FAM98C 1 0 1.0 0.0 INCL_NON_REF_SPLICE RALGPS2-AS1^ENSG00000273062.1 chr1:178724937:- FAM98C^ENSG00000130244.12 chr19:38405261:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1101:10676:1925 . NO_LDAS 0.0102 GT 0.9056 AG 1.7465 "[""INTERCHROMOSOMAL[chr1--chr19]""]" chr1:178724937-chr19:38405261 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RALGDS--TCF20 1 0 1.0 0.0 ONLY_REF_SPLICE RALGDS^ENSG00000160271.16 chr9:133148963:- TCF20^ENSG00000100207.20 chr22:42215341:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1358:33133:19692 . YES_LDAS 0.0102 GT 1.9329 AG 1.7465 "[""INTERCHROMOSOMAL[chr9--chr22]""]" chr9:133148963-chr22:42215341 False 0 Read count too low: 1 < 5 FAIL 1
RALGAPB--PPA2 1 0 1.0 0.0 INCL_NON_REF_SPLICE RALGAPB^ENSG00000170471.15 chr20:38576231:+ PPA2^ENSG00000138777.20 chr4:105456745:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1490:9729:15643 . NO_LDAS 0.0102 GT 1.5546 AG 1.9329 "[""INTERCHROMOSOMAL[chr20--chr4]""]" chr20:38576231-chr4:105456745 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RALGAPA1--RAB8B 1 0 1.0 0.0 ONLY_REF_SPLICE RALGAPA1^ENSG00000174373.17 chr14:35808730:- RAB8B^ENSG00000166128.13 chr15:63244756:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1134:30949:10809 . YES_LDAS 0.0102 GT 1.9329 AG 1.4295 "[""INTERCHROMOSOMAL[chr14--chr15]""]" chr14:35808730-chr15:63244756 False 0 Read count too low: 1 < 5 FAIL 1
RALGAPA1--PCNX2 1 0 1.0 0.0 ONLY_REF_SPLICE RALGAPA1^ENSG00000174373.17 chr14:35721688:- PCNX2^ENSG00000135749.19 chr1:233252788:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1164:34355:16540 . YES_LDAS 0.0102 GT 1.8892 AG 1.9899 "[""INTERCHROMOSOMAL[chr14--chr1]""]" chr14:35721688-chr1:233252788 False 0 Read count too low: 1 < 5 FAIL 1
RAF1--TOP2B 1 0 1.0 0.0 ONLY_REF_SPLICE RAF1^ENSG00000132155.13 chr3:12663813:- TOP2B^ENSG00000077097.15 chr3:25645470:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1197:41588:24779 . NO_LDAS 0.0102 GT 1.7465 AG 1.8295 "[""INTRACHROMOSOMAL[chr3:12.93Mb]""]" chr3:12663813-chr3:25645470 False 0 Read count too low: 1 < 5 FAIL 1
RAD51B--WDR33 1 0 1.0 0.0 ONLY_REF_SPLICE RAD51B^ENSG00000182185.18 chr14:67835196:+ WDR33^ENSG00000136709.12 chr2:127726777:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1278:12504:16862 . YES_LDAS 0.0102 GT 1.9329 AG 1.7968 "[""INTERCHROMOSOMAL[chr14--chr2]""]" chr14:67835196-chr2:127726777 False 0 Read count too low: 1 < 5 FAIL 1
RAD51B--TANK 1 0 1.0 0.0 ONLY_REF_SPLICE RAD51B^ENSG00000182185.18 chr14:68411527:+ TANK^ENSG00000136560.14 chr2:161179614:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2407:43877:14172 . YES_LDAS 0.0102 GT 1.6895 AG 1.7819 "[""INTERCHROMOSOMAL[chr14--chr2]""]" chr14:68411527-chr2:161179614 False 0 Read count too low: 1 < 5 FAIL 1
RAD51B--COL9A2 1 0 1.0 0.0 ONLY_REF_SPLICE RAD51B^ENSG00000182185.18 chr14:67887204:+ COL9A2^ENSG00000049089.15 chr1:40312112:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2187:30351:3354 . YES_LDAS 0.0102 GT 1.9329 AG 1.7819 "[""INTERCHROMOSOMAL[chr14--chr1]""]" chr14:67887204-chr1:40312112 False 0 Read count too low: 1 < 5 FAIL 1
RAD21--STAU2 1 0 1.0 0.0 ONLY_REF_SPLICE RAD21^ENSG00000164754.15 chr8:116874611:- STAU2^ENSG00000040341.18 chr8:73688813:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1149:40431:26642 . YES_LDAS 0.0102 GT 1.5656 AG 1.9656 "[""INTRACHROMOSOMAL[chr8:43.10Mb]""]" chr8:116874611-chr8:73688813 False 0 Read count too low: 1 < 5 FAIL 1
RAD21--PARP4 1 0 1.0 0.0 ONLY_REF_SPLICE RAD21^ENSG00000164754.15 chr8:116851948:- PARP4^ENSG00000102699.6 chr13:24501834:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1151:16500:28744 . YES_LDAS 0.0102 GT 1.9329 AG 1.8062 "[""INTERCHROMOSOMAL[chr8--chr13]""]" chr8:116851948-chr13:24501834 False 0 Read count too low: 1 < 5 FAIL 1
RAD21--OXR1 1 0 1.0 0.0 ONLY_REF_SPLICE RAD21^ENSG00000164754.15 chr8:116848946:- OXR1^ENSG00000164830.19 chr8:106692728:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2110:51797:6843 . YES_LDAS 0.0102 GT 1.8892 AG 1.9329 "[""INTRACHROMOSOMAL[chr8:10.09Mb]""]" chr8:116848946-chr8:106692728 False 0 Read count too low: 1 < 5 FAIL 1
RAD1--TMEM161B-AS1 1 0 0.5 0.0 INCL_NON_REF_SPLICE RAD1^ENSG00000113456.19 chr5:34914695:- TMEM161B-AS1^ENSG00000247828.8 chr5:88273882:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2263:20683:24807 . NO_LDAS 0.0051 GT 1.7968 AG 1.9656 "[""INTRACHROMOSOMAL[chr5:53.35Mb]""]" chr5:34914695-chr5:88273882 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RAD1--AL023877.1 1 0 0.5 0.0 INCL_NON_REF_SPLICE RAD1^ENSG00000113456.19 chr5:34914695:- AL023877.1^ENSG00000286767.1 chrX:113187332:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2263:20683:24807 . NO_LDAS 0.0051 GT 1.7968 AG 1.9656 "[""INTERCHROMOSOMAL[chr5--chrX]""]" chr5:34914695-chrX:113187332 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RACGAP1--GNS 1 0 1.0 0.0 ONLY_REF_SPLICE RACGAP1^ENSG00000161800.13 chr12:50016631:- GNS^ENSG00000135677.11 chr12:64729057:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1187:40180:18221 . YES_LDAS 0.0102 GT 1.7968 AG 1.9899 "[""INTRACHROMOSOMAL[chr12:14.68Mb]""]" chr12:50016631-chr12:64729057 False 0 Read count too low: 1 < 5 FAIL 1
RACGAP1--BMS1P15 1 0 0.5 0.0 INCL_NON_REF_SPLICE RACGAP1^ENSG00000161800.13 chr12:49989770:- BMS1P15^ENSG00000258780.1 chr15:20157534:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2122:44306:24387 . NO_LDAS 0.0051 GT 1.8295 AG 1.7819 "[""INTERCHROMOSOMAL[chr12--chr15]""]" chr12:49989770-chr15:20157534 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RABGGTB--LRCH1 1 0 1.0 0.0 ONLY_REF_SPLICE RABGGTB^ENSG00000137955.16 chr1:75787604:+ LRCH1^ENSG00000136141.15 chr13:46650201:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2270:50697:9477 . YES_LDAS 0.0102 GT 1.4566 AG 1.4566 "[""INTERCHROMOSOMAL[chr1--chr13]""]" chr1:75787604-chr13:46650201 False 0 Read count too low: 1 < 5 FAIL 1
RABGEF1--OGDH 1 0 1.0 0.0 ONLY_REF_SPLICE RABGEF1^ENSG00000154710.18 chr7:66682258:+ OGDH^ENSG00000105953.15 chr7:44624317:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2408:19122:28464 . YES_LDAS 0.0102 GT 1.4566 AG 1.8892 "[""INTRACHROMOSOMAL[chr7:21.97Mb]""]" chr7:66682258-chr7:44624317 False 0 Read count too low: 1 < 5 FAIL 1
RABGAP1L--USP1 1 0 1.0 0.0 ONLY_REF_SPLICE RABGAP1L^ENSG00000152061.23 chr1:174752354:+ USP1^ENSG00000162607.13 chr1:62439799:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1138:19332:20533 . YES_LDAS 0.0102 GT 1.9656 AG 1.5058 "[""INTRACHROMOSOMAL[chr1:111.71Mb]""]" chr1:174752354-chr1:62439799 False 0 Read count too low: 1 < 5 FAIL 1
RABGAP1L--KIFAP3 1 0 1.0 0.0 ONLY_REF_SPLICE RABGAP1L^ENSG00000152061.23 chr1:174394145:+ KIFAP3^ENSG00000075945.13 chr1:170016624:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1303:50050:5974 . YES_LDAS 0.0102 GT 1.7819 AG 1.585 "[""INTRACHROMOSOMAL[chr1:4.07Mb]""]" chr1:174394145-chr1:170016624 False 0 Read count too low: 1 < 5 FAIL 1
RABGAP1L--GABRB2 1 0 1.0 0.0 INCL_NON_REF_SPLICE RABGAP1L^ENSG00000152061.23 chr1:174275935:+ GABRB2^ENSG00000145864.14 chr5:161330406:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1173:3063:28590 . NO_LDAS 0.0102 GT 1.4566 AG 1.7232 "[""INTERCHROMOSOMAL[chr1--chr5]""]" chr1:174275935-chr5:161330406 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RABGAP1L--ACBD6 1 0 1.0 0.0 ONLY_REF_SPLICE RABGAP1L^ENSG00000152061.23 chr1:174699650:+ ACBD6^ENSG00000230124.8 chr1:180430262:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1267:24582:6927 . YES_LDAS 0.0102 GT 1.8323 AG 1.5546 "[""Klijn_CellLines"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr1:5.27Mb]""]" chr1:174699650-chr1:180430262 False 0 Read count too low: 1 < 5 FAIL 1
RABEP2--HEATR5A 1 0 1.0 0.0 INCL_NON_REF_SPLICE RABEP2^ENSG00000177548.13 chr16:28905867:- HEATR5A^ENSG00000129493.15 chr14:31297276:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1174:20278:8104 . NO_LDAS 0.0102 GT 1.7232 AG 1.7465 "[""INTERCHROMOSOMAL[chr16--chr14]""]" chr16:28905867-chr14:31297276 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RAB7A--RAB33B 1 0 0.33 0.0 INCL_NON_REF_SPLICE RAB7A^ENSG00000075785.14 chr3:128807671:+ RAB33B^ENSG00000172007.7 chr4:139472692:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2464:49645:17240 . NO_LDAS 0.0034 GT 1.9219 AG 1.9329 "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr3--chr4]""]" chr3:128807671-chr4:139472692 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
RAB7A--RAB27A 1 0 0.33 0.0 INCL_NON_REF_SPLICE RAB7A^ENSG00000075785.14 chr3:128807671:+ RAB27A^ENSG00000069974.16 chr15:55230426:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2464:49645:17240 . NO_LDAS 0.0034 GT 1.9219 AG 1.9656 "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr3--chr15]""]" chr3:128807671-chr15:55230426 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
RAB7A--RAB11A 1 0 0.33 0.0 INCL_NON_REF_SPLICE RAB7A^ENSG00000075785.14 chr3:128807671:+ RAB11A^ENSG00000103769.10 chr15:65877481:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2464:49645:17240 . NO_LDAS 0.0034 GT 1.9219 AG 1.8892 "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr3--chr15]""]" chr3:128807671-chr15:65877481 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
RAB40C--PIGQ 1 0 1.0 0.0 ONLY_REF_SPLICE RAB40C^ENSG00000197562.10 chr16:590433:+ PIGQ^ENSG00000007541.17 chr16:578379:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1235:27705:23602 . YES_LDAS 0.0102 GT 1.9086 AG 1.7465 "[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[5248]""]" chr16:590433-chr16:578379 False 0 Read count too low: 1 < 5 FAIL 1
RAB3GAP2--FAM210A 1 0 1.0 0.0 INCL_NON_REF_SPLICE RAB3GAP2^ENSG00000118873.16 chr1:220193240:- FAM210A^ENSG00000177150.13 chr18:13726621:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2459:8588:22915 . NO_LDAS 0.0102 GT 1.9086 AG 1.7819 "[""INTERCHROMOSOMAL[chr1--chr18]""]" chr1:220193240-chr18:13726621 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RAB3GAP2--DIAPH3 1 0 1.0 0.0 ONLY_REF_SPLICE RAB3GAP2^ENSG00000118873.16 chr1:220272223:- DIAPH3^ENSG00000139734.19 chr13:60042820:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1111:2998:20883 . YES_LDAS 0.0102 GT 1.7819 AG 1.7819 "[""INTERCHROMOSOMAL[chr1--chr13]""]" chr1:220272223-chr13:60042820 False 0 Read count too low: 1 < 5 FAIL 1
RAB3GAP2--AGBL4 1 0 1.0 0.0 INCL_NON_REF_SPLICE RAB3GAP2^ENSG00000118873.16 chr1:220205907:- AGBL4^ENSG00000186094.17 chr1:48817769:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2111:10684:6759 . NO_LDAS 0.0102 GT 1.7968 AG 1.8892 "[""INTRACHROMOSOMAL[chr1:170.12Mb]""]" chr1:220205907-chr1:48817769 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RAB3GAP1--SMARCAL1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RAB3GAP1^ENSG00000115839.18 chr2:135113241:+ SMARCAL1^ENSG00000138375.13 chr2:216450979:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2271:47129:5204 . NO_LDAS 0.0102 GT 1.6402 AG 1.9329 "[""INTRACHROMOSOMAL[chr2:81.24Mb]""]" chr2:135113241-chr2:216450979 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RAB3GAP1--PGBD2 1 0 1.0 0.0 ONLY_REF_SPLICE RAB3GAP1^ENSG00000115839.18 chr2:135058086:+ PGBD2^ENSG00000185220.12 chr1:248917279:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2315:46296:11187 . YES_LDAS 0.0102 GT 1.7465 AG 1.8295 "[""INTERCHROMOSOMAL[chr2--chr1]""]" chr2:135058086-chr1:248917279 False 0 Read count too low: 1 < 5 FAIL 1
RAB3GAP1--NCKAP5 1 0 1.0 0.0 ONLY_REF_SPLICE RAB3GAP1^ENSG00000115839.18 chr2:135168749:+ NCKAP5^ENSG00000176771.17 chr2:132732051:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1174:18563:11187 . YES_LDAS 0.0102 GT 1.9656 AG 1.8323 "[""INTRACHROMOSOMAL[chr2:1.48Mb]""]" chr2:135168749-chr2:132732051 False 0 Read count too low: 1 < 5 FAIL 1
RAB38--CTSC 1 0 1.0 0.0 ONLY_REF_SPLICE RAB38^ENSG00000123892.12 chr11:88175183:- CTSC^ENSG00000109861.17 chr11:88312554:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1213:43157:6675 . YES_LDAS 0.0102 GT 1.9656 AG 1.6895 "[""ChimerPub"",""INTRACHROMOSOMAL[chr11:0.09Mb]"",""LOCAL_REARRANGEMENT:-:[89626]""]" chr11:88175183-chr11:88312554 False 0 Read count too low: 1 < 5 FAIL 1
RAB2A--TCF12 1 0 1.0 0.0 ONLY_REF_SPLICE RAB2A^ENSG00000104388.15 chr8:60558923:+ TCF12^ENSG00000140262.18 chr15:57166402:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2181:28053:4363 . YES_LDAS 0.0102 GT 1.8892 AG 1.5546 "[""INTERCHROMOSOMAL[chr8--chr15]""]" chr8:60558923-chr15:57166402 False 0 Read count too low: 1 < 5 FAIL 1
RAB21--EXOC7 1 0 0.5 0.0 INCL_NON_REF_SPLICE RAB21^ENSG00000080371.6 chr12:71755241:+ EXOC7^ENSG00000182473.22 chr17:76084349:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2266:39128:24218 . NO_LDAS 0.0051 GC 1.5656 AG 1.7232 "[""INTERCHROMOSOMAL[chr12--chr17]""]" chr12:71755241-chr17:76084349 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RAB1A--SRPK1 1 0 1.0 0.0 ONLY_REF_SPLICE RAB1A^ENSG00000138069.18 chr2:65104734:- SRPK1^ENSG00000096063.16 chr6:35886811:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2154:3621:13555 . NO_LDAS 0.0102 GT 1.8295 AG 1.9899 "[""INTERCHROMOSOMAL[chr2--chr6]""]" chr2:65104734-chr6:35886811 False 0 Read count too low: 1 < 5 FAIL 1
RAB11FIP3--AL683807.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RAB11FIP3^ENSG00000090565.17 chr16:489000:+ AL683807.1^ENSG00000223511.7 chrX:1751287:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2494:3654:22971 . YES_LDAS 0.0102 GT 1.7968 AG 1.8892 "[""INTERCHROMOSOMAL[chr16--chrY]""]" chr16:489000-chrX:1751287 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RAB11A--GIN1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RAB11A^ENSG00000103769.10 chr15:65887816:+ GIN1^ENSG00000145723.17 chr5:103088172:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2417:39824:8328 . YES_LDAS 0.0102 GT 1.371 AG 1.7465 "[""INTERCHROMOSOMAL[chr15--chr5]""]" chr15:65887816-chr5:103088172 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
R3HDM2--LINC01405 1 0 0.5 0.0 INCL_NON_REF_SPLICE R3HDM2^ENSG00000179912.20 chr12:57292572:- LINC01405^ENSG00000185847.8 chr12:110942220:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1303:6307:29361 . YES_LDAS 0.0051 GT 1.9899 AG 1.9656 "[""INTRACHROMOSOMAL[chr12:53.50Mb]""]" chr12:57292572-chr12:110942220 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
R3HDM2--DPY19L1P1 1 0 0.5 0.0 ONLY_REF_SPLICE R3HDM2^ENSG00000179912.20 chr12:57292572:- DPY19L1P1^ENSG00000229358.3 chr7:32581664:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1303:6307:29361 . YES_LDAS 0.0051 GT 1.9899 AG 1.9656 "[""INTERCHROMOSOMAL[chr12--chr7]""]" chr12:57292572-chr7:32581664 False 0 Read count too low: 1 < 5 FAIL 1
R3HDM1--RBX1 1 0 1.0 0.0 ONLY_REF_SPLICE R3HDM1^ENSG00000048991.16 chr2:135622732:+ RBX1^ENSG00000100387.9 chr22:40967799:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1471:2311:27567 . YES_LDAS 0.0102 GT 1.4716 AG 1.6895 "[""INTERCHROMOSOMAL[chr2--chr22]""]" chr2:135622732-chr22:40967799 False 0 Read count too low: 1 < 5 FAIL 1
R3HDM1--R3HDM2 1 0 1.0 0.0 ONLY_REF_SPLICE R3HDM1^ENSG00000048991.16 chr2:135639122:+ R3HDM2^ENSG00000179912.20 chr12:57297387:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1262:21492:18305 . NO_LDAS 0.0102 GT 1.9219 AG 1.9086 "[""INTERCHROMOSOMAL[chr2--chr12]""]" chr2:135639122-chr12:57297387 False 0 Read count too low: 1 < 5 FAIL 1
QSOX2--B2M 1 0 1.0 0.0 ONLY_REF_SPLICE QSOX2^ENSG00000165661.17 chr9:136226774:- B2M^ENSG00000166710.21 chr15:44717607:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2132:27543:9337 . NO_LDAS 0.0102 GT 1.7232 AG 1.9656 "[""INTERCHROMOSOMAL[chr9--chr15]""]" chr9:136226774-chr15:44717607 False 0 Read count too low: 1 < 5 FAIL 1
QRSL1--TULP4 1 0 1.0 0.0 ONLY_REF_SPLICE QRSL1^ENSG00000130348.11 chr6:106629705:+ TULP4^ENSG00000130338.13 chr6:158429736:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1161:3548:26544 . YES_LDAS 0.0102 GT 1.8256 AG 1.9086 "[""INTRACHROMOSOMAL[chr6:51.56Mb]""]" chr6:106629705-chr6:158429736 False 0 Read count too low: 1 < 5 FAIL 1
QPRT--TRIM58 1 0 1.0 0.0 INCL_NON_REF_SPLICE QPRT^ENSG00000103485.19 chr16:29695199:+ TRIM58^ENSG00000162722.9 chr1:247857204:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1203:2278:2009 . NO_LDAS 0.0102 GT 1.5546 AG 1.5329 "[""INTERCHROMOSOMAL[chr16--chr1]""]" chr16:29695199-chr1:247857204 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
QPRT--TMC3-AS1 1 0 1.0 0.0 INCL_NON_REF_SPLICE QPRT^ENSG00000103485.19 chr16:29697371:+ TMC3-AS1^ENSG00000259343.7 chr15:81389455:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2338:15619:12084 . NO_LDAS 0.0102 GT 1.7056 AG 1.8892 "[""INTERCHROMOSOMAL[chr16--chr15]""]" chr16:29697371-chr15:81389455 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PYM1--PPHLN1 1 0 1.0 0.0 ONLY_REF_SPLICE PYM1^ENSG00000170473.17 chr12:55927725:- PPHLN1^ENSG00000134283.18 chr12:42335883:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2420:44872:6563 . NO_LDAS 0.0102 GT 1.8062 AG 1.9086 "[""INTRACHROMOSOMAL[chr12:13.44Mb]""]" chr12:55927725-chr12:42335883 False 0 Read count too low: 1 < 5 FAIL 1
PWWP2A--PHTF1 1 0 1.0 0.0 ONLY_REF_SPLICE PWWP2A^ENSG00000170234.13 chr5:160093101:- PHTF1^ENSG00000116793.16 chr1:113758733:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1208:11735:27777 . YES_LDAS 0.0102 GT 1.8295 AG 1.8256 "[""INTERCHROMOSOMAL[chr5--chr1]""]" chr5:160093101-chr1:113758733 False 0 Read count too low: 1 < 5 FAIL 1
PUM1--CLIC4 1 0 1.0 0.0 ONLY_REF_SPLICE PUM1^ENSG00000134644.16 chr1:31059204:- CLIC4^ENSG00000169504.15 chr1:24797742:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2482:5514:17226 . YES_LDAS 0.0102 GT 1.8892 AG 1.7968 "[""INTRACHROMOSOMAL[chr1:6.09Mb]""]" chr1:31059204-chr1:24797742 False 0 Read count too low: 1 < 5 FAIL 1
PTPRCAP--ALDH16A1 1 0 1.0 0.0 ONLY_REF_SPLICE PTPRCAP^ENSG00000213402.3 chr11:67437617:- ALDH16A1^ENSG00000161618.10 chr19:49468381:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1329:32899:28590 . YES_LDAS 0.0102 GT 1.9086 AG 1.8295 "[""INTERCHROMOSOMAL[chr11--chr19]""]" chr11:67437617-chr19:49468381 False 0 Read count too low: 1 < 5 FAIL 1
PTPN4--WDR33 1 0 1.0 0.0 ONLY_REF_SPLICE PTPN4^ENSG00000088179.9 chr2:119809991:+ WDR33^ENSG00000136709.12 chr2:127765269:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2293:16808:4027 . YES_LDAS 0.0102 GT 1.9086 AG 1.9086 "[""INTRACHROMOSOMAL[chr2:7.72Mb]""]" chr2:119809991-chr2:127765269 False 0 Read count too low: 1 < 5 FAIL 1
PTPN4--SPATA5 1 0 1.0 0.0 ONLY_REF_SPLICE PTPN4^ENSG00000088179.9 chr2:119862643:+ SPATA5^ENSG00000145375.9 chr4:123256016:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2276:46223:3634 . NO_LDAS 0.0102 GT 1.7056 AG 1.8256 "[""INTERCHROMOSOMAL[chr2--chr4]""]" chr2:119862643-chr4:123256016 False 0 Read count too low: 1 < 5 FAIL 1
PTMS--GAL3ST3 1 0 1.0 0.0 INCL_NON_REF_SPLICE PTMS^ENSG00000159335.18 chr12:6770218:+ GAL3ST3^ENSG00000175229.7 chr11:66041907:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1187:45438:19062 . NO_LDAS 0.0102 GT 1.7465 AG 1.9086 "[""INTERCHROMOSOMAL[chr12--chr11]""]" chr12:6770218-chr11:66041907 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PTMAP2--NEUROD4 1 0 1.0 0.0 INCL_NON_REF_SPLICE PTMAP2^ENSG00000197744.5 chr5:118973970:+ NEUROD4^ENSG00000123307.4 chr12:55026605:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2277:9713:28674 . YES_LDAS 0.0102 GT 0.971 AG 0.971 "[""INTERCHROMOSOMAL[chr5--chr12]""]" chr5:118973970-chr12:55026605 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PTCD3--ZNF462 1 0 1.0 0.0 INCL_NON_REF_SPLICE PTCD3^ENSG00000132300.19 chr2:86137545:+ ZNF462^ENSG00000148143.13 chr9:107009378:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1419:6930:27441 . NO_LDAS 0.0102 GT 1.8256 AG 1.8892 "[""INTERCHROMOSOMAL[chr2--chr9]""]" chr2:86137545-chr9:107009378 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PTBP3--SUSD1 1 0 1.0 0.0 ONLY_REF_SPLICE PTBP3^ENSG00000119314.16 chr9:112333470:- SUSD1^ENSG00000106868.17 chr9:112157613:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2354:37939:3690 . YES_LDAS 0.0102 GT 1.8295 AG 1.8323 "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr9:0.04Mb]"",""NEIGHBORS[42419]""]" chr9:112333470-chr9:112157613 False 0 Read count too low: 1 < 5 FAIL 1
PTBP2--APBB2 1 0 1.0 0.0 ONLY_REF_SPLICE PTBP2^ENSG00000117569.19 chr1:96723594:+ APBB2^ENSG00000163697.17 chr4:41143142:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2209:29242:16231 . YES_LDAS 0.0102 GT 1.8295 AG 1.5628 "[""INTERCHROMOSOMAL[chr1--chr4]""]" chr1:96723594-chr4:41143142 False 0 Read count too low: 1 < 5 FAIL 1
PSPC1--ZMYM5 1 0 1.0 0.0 ONLY_REF_SPLICE PSPC1^ENSG00000121390.19 chr13:19772242:- ZMYM5^ENSG00000132950.19 chr13:19852190:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1408:6234:14242 . YES_LDAS 0.0102 GT 1.8256 AG 1.9086 "[""TumorFusionsNAR2018"",""ChimerSeq"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr13:0.04Mb]"",""LOCAL_REARRANGEMENT:-:[40463]""]" chr13:19772242-chr13:19852190 False 0 Read count too low: 1 < 5 FAIL 1
PSMG2--PNPLA8 1 0 1.0 0.0 ONLY_REF_SPLICE PSMG2^ENSG00000128789.21 chr18:12665139:+ PNPLA8^ENSG00000135241.17 chr7:108497577:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1137:23425:12882 . YES_LDAS 0.0102 GT 1.7819 AG 1.5058 "[""INTERCHROMOSOMAL[chr18--chr7]""]" chr18:12665139-chr7:108497577 False 0 Read count too low: 1 < 5 FAIL 1
PSMF1--RSRC2 1 0 1.0 0.0 INCL_NON_REF_SPLICE PSMF1^ENSG00000125818.18 chr20:1127508:+ RSRC2^ENSG00000111011.18 chr12:122511172:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2170:31151:12616 . NO_LDAS 0.0102 GT 1.9656 AG 1.6049 "[""INTERCHROMOSOMAL[chr20--chr12]""]" chr20:1127508-chr12:122511172 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PSME2--TOPBP1 1 0 1.0 0.0 INCL_NON_REF_SPLICE PSME2^ENSG00000100911.16 chr14:24145379:- TOPBP1^ENSG00000163781.14 chr3:133623189:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1109:31540:23602 . NO_LDAS 0.0102 GT 1.9086 AG 1.7232 "[""INTERCHROMOSOMAL[chr14--chr3]""]" chr14:24145379-chr3:133623189 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PSME2--BCAP31 1 0 1.0 0.0 INCL_NON_REF_SPLICE PSME2^ENSG00000100911.16 chr14:24144400:- BCAP31^ENSG00000185825.17 chrX:153702095:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1483:2578:9477 . YES_LDAS 0.0102 GT 1.8892 AG 1.9656 "[""INTERCHROMOSOMAL[chr14--chrX]""]" chr14:24144400-chrX:153702095 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PSMD2--INPPL1 1 0 1.0 0.0 INCL_NON_REF_SPLICE PSMD2^ENSG00000175166.17 chr3:184302823:+ INPPL1^ENSG00000165458.14 chr11:72235746:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2354:19923:1462 . NO_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chr3--chr11]""]" chr3:184302823-chr11:72235746 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PSMC1--ZBTB17 1 0 1.0 0.0 INCL_NON_REF_SPLICE PSMC1^ENSG00000100764.14 chr14:90273755:+ ZBTB17^ENSG00000116809.12 chr1:15945146:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2486:34347:17815 . NO_LDAS 0.0102 GT 1.8295 AG 1.3996 "[""INTERCHROMOSOMAL[chr14--chr1]""]" chr14:90273755-chr1:15945146 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PSMB9--LNPEP 1 0 1.0 0.0 ONLY_REF_SPLICE PSMB9^ENSG00000240065.8 chr6:32858505:+ LNPEP^ENSG00000113441.16 chr5:96979138:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2231:48003:27483 . NO_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chr6--chr5]""]" chr6:32858505-chr5:96979138 False 0 Read count too low: 1 < 5 FAIL 1
PSG11--RCBTB2 1 0 1.0 0.0 INCL_NON_REF_SPLICE PSG11^ENSG00000243130.8 chr19:43018528:- RCBTB2^ENSG00000136161.13 chr13:48512895:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2435:27268:16091 . YES_LDAS 0.0102 GT 1.7056 AG 1.8062 "[""INTERCHROMOSOMAL[chr19--chr13]""]" chr19:43018528-chr13:48512895 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PRTFDC1--ABI1 1 0 1.0 0.0 ONLY_REF_SPLICE PRTFDC1^ENSG00000099256.19 chr10:24855318:- ABI1^ENSG00000136754.18 chr10:26751783:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1124:3249:14648 . NO_LDAS 0.0102 GT 1.9656 AG 1.9656 "[""INTRACHROMOSOMAL[chr10:1.79Mb]""]" chr10:24855318-chr10:26751783 False 0 Read count too low: 1 < 5 FAIL 1
PRRC2C--MRPL15 1 0 1.0 0.0 ONLY_REF_SPLICE PRRC2C^ENSG00000117523.16 chr1:171522259:+ MRPL15^ENSG00000137547.9 chr8:54147382:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2487:38813:8314 . YES_LDAS 0.0102 GT 1.5546 AG 1.8892 "[""INTERCHROMOSOMAL[chr1--chr8]""]" chr1:171522259-chr8:54147382 False 0 Read count too low: 1 < 5 FAIL 1
PRR13--EIF4B 1 0 1.0 0.0 ONLY_REF_SPLICE PRR13^ENSG00000205352.11 chr12:53442733:+ EIF4B^ENSG00000063046.18 chr12:53038356:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2240:52137:24050 . YES_LDAS 0.0102 GT 1.9329 AG 1.4566 "[""INTRACHROMOSOMAL[chr12:0.40Mb]""]" chr12:53442733-chr12:53038356 False 0 Read count too low: 1 < 5 FAIL 1
PRPSAP2--RCC2 1 0 1.0 0.0 ONLY_REF_SPLICE PRPSAP2^ENSG00000141127.15 chr17:18865952:+ RCC2^ENSG00000179051.14 chr1:17416646:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2154:51045:3830 . YES_LDAS 0.0102 GT 1.5546 AG 1.8892 "[""INTERCHROMOSOMAL[chr17--chr1]""]" chr17:18865952-chr1:17416646 False 0 Read count too low: 1 < 5 FAIL 1
PRPS1--AGAP5 1 0 0.5 0.0 INCL_NON_REF_SPLICE PRPS1^ENSG00000147224.13 chrX:107636679:+ AGAP5^ENSG00000172650.14 chr10:73697720:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1111:31370:17338 . NO_LDAS 0.0051 GT 1.9329 AG 1.9329 "[""INTERCHROMOSOMAL[chrX--chr10]""]" chrX:107636679-chr10:73697720 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PRPF8--RNF167 1 0 1.0 0.0 ONLY_REF_SPLICE PRPF8^ENSG00000174231.17 chr17:1673081:- RNF167^ENSG00000108523.16 chr17:4944558:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1427:35059:19552 . YES_LDAS 0.0102 GT 1.6895 AG 1.9086 "[""INTRACHROMOSOMAL[chr17:3.26Mb]""]" chr17:1673081-chr17:4944558 False 0 Read count too low: 1 < 5 FAIL 1
PRPF4B--GMPS 1 0 1.0 0.0 ONLY_REF_SPLICE PRPF4B^ENSG00000112739.17 chr6:4021466:+ GMPS^ENSG00000163655.16 chr3:155914419:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1212:11687:4573 . YES_LDAS 0.0102 GT 1.5656 AG 1.9656 "[""INTERCHROMOSOMAL[chr6--chr3]""]" chr6:4021466-chr3:155914419 False 0 Read count too low: 1 < 5 FAIL 1
PROS1--BAZ1B 1 0 0.5 0.0 ONLY_REF_SPLICE PROS1^ENSG00000184500.16 chr3:93923775:- BAZ1B^ENSG00000009954.11 chr7:73508471:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2433:6841:12910 . YES_LDAS 0.0051 GC 1.9329 AG 1.5656 "[""INTERCHROMOSOMAL[chr3--chr7]""]" chr3:93923775-chr7:73508471 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
PROK2--SHANK3 1 0 1.0 0.0 INCL_NON_REF_SPLICE PROK2^ENSG00000163421.9 chr3:71785197:- SHANK3^ENSG00000251322.9 chr22:50731355:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1256:38813:26642 . NO_LDAS 0.0102 GT 1.5329 AG 1.1033 "[""INTERCHROMOSOMAL[chr3--chr22]""]" chr3:71785197-chr22:50731355 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PRMT2--MCM3AP 1 0 1.0 0.0 ONLY_REF_SPLICE PRMT2^ENSG00000160310.18 chr21:46635763:+ MCM3AP^ENSG00000160294.11 chr21:46285394:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2453:3516:4377 . YES_LDAS 0.0102 GT 1.8323 AG 1.9656 "[""INTRACHROMOSOMAL[chr21:0.35Mb]""]" chr21:46635763-chr21:46285394 False 0 Read count too low: 1 < 5 FAIL 1
PRMT2--AC241585.1 1 0 0.5 0.0 INCL_NON_REF_SPLICE PRMT2^ENSG00000160310.18 chr21:46649739:+ AC241585.1^ENSG00000223612.3 chr1:145233329:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2497:23417:4349 . YES_LDAS 0.0051 GT 1.7819 AG 1.5219 "[""INTERCHROMOSOMAL[chr21--chr1]""]" chr21:46649739-chr1:145233329 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PRLHR--PPIB 1 0 1.0 0.0 INCL_NON_REF_SPLICE PRLHR^ENSG00000119973.6 chr10:118593980:- PPIB^ENSG00000166794.6 chr15:64156145:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2372:32009:25423 . NO_LDAS 0.0102 GT 1.5656 AG 1.5546 "[""INTERCHROMOSOMAL[chr10--chr15]""]" chr10:118593980-chr15:64156145 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PRKD2--TAF1 1 0 1.0 0.0 ONLY_REF_SPLICE PRKD2^ENSG00000105287.13 chr19:46681650:- TAF1^ENSG00000147133.16 chrX:71381743:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1143:12366:25451 . YES_LDAS 0.0102 GT 1.8892 AG 1.9086 "[""INTERCHROMOSOMAL[chr19--chrX]""]" chr19:46681650-chrX:71381743 False 0 Read count too low: 1 < 5 FAIL 1
PRKD2--KIR3DX1 1 0 1.0 0.0 ONLY_REF_SPLICE PRKD2^ENSG00000105287.13 chr19:46710907:- KIR3DX1^ENSG00000104970.11 chr19:54542524:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1136:6356:4811 . YES_LDAS 0.0102 GT 1.9656 AG 1.5546 "[""INTRACHROMOSOMAL[chr19:7.82Mb]""]" chr19:46710907-chr19:54542524 False 0 Read count too low: 1 < 5 FAIL 1
PRKCI--YEATS2 1 0 1.0 0.0 ONLY_REF_SPLICE PRKCI^ENSG00000163558.13 chr3:170284596:+ YEATS2^ENSG00000163872.16 chr3:183752073:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2209:38020:28828 . YES_LDAS 0.0102 GT 1.9329 AG 1.5656 "[""INTRACHROMOSOMAL[chr3:13.39Mb]""]" chr3:170284596-chr3:183752073 False 0 Read count too low: 1 < 5 FAIL 1
PRKCB--TMEM161B 1 0 1.0 0.0 ONLY_REF_SPLICE PRKCB^ENSG00000166501.14 chr16:23837406:+ TMEM161B^ENSG00000164180.14 chr5:88240916:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1394:30342:17464 . YES_LDAS 0.0102 GT 1.9899 AG 1.5656 "[""INTERCHROMOSOMAL[chr16--chr5]""]" chr16:23837406-chr5:88240916 False 0 Read count too low: 1 < 5 FAIL 1
PRKAR1B--SUN1 1 0 1.0 0.0 ONLY_REF_SPLICE PRKAR1B^ENSG00000188191.15 chr7:596146:- SUN1^ENSG00000164828.18 chr7:857828:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2466:50268:12995 . YES_LDAS 0.0102 GT 1.9329 AG 1.7968 "[""ChimerSeq"",""INTRACHROMOSOMAL[chr7:0.09Mb]"",""LOCAL_INVERSION:-:+:[88965]""]" chr7:596146-chr7:857828 False 0 Read count too low: 1 < 5 FAIL 1
PRKAR1A--METAP1 1 0 1.0 0.0 ONLY_REF_SPLICE PRKAR1A^ENSG00000108946.15 chr17:68524958:+ METAP1^ENSG00000164024.12 chr4:99041043:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2289:36329:24667 . YES_LDAS 0.0102 GT 1.7056 AG 1.9329 "[""INTERCHROMOSOMAL[chr17--chr4]""]" chr17:68524958-chr4:99041043 False 0 Read count too low: 1 < 5 FAIL 1
PRKAG2--KMT2C 1 0 1.0 0.0 ONLY_REF_SPLICE PRKAG2^ENSG00000106617.15 chr7:151632069:- KMT2C^ENSG00000055609.20 chr7:152273867:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1397:46668:26544 . YES_LDAS 0.0102 GT 1.8323 AG 1.7968 "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr7:0.26Mb]""]" chr7:151632069-chr7:152273867 False 0 Read count too low: 1 < 5 FAIL 1
PRKAG2--AC241585.1 1 0 0.5 0.0 INCL_NON_REF_SPLICE PRKAG2^ENSG00000106617.15 chr7:151632069:- AC241585.1^ENSG00000223612.3 chr1:145233055:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2130:19979:3718 . YES_LDAS 0.0051 GT 1.8323 AG 1.7465 "[""INTERCHROMOSOMAL[chr7--chr1]""]" chr7:151632069-chr1:145233055 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PRKAB1--ZNF839 1 0 1.0 0.0 ONLY_REF_SPLICE PRKAB1^ENSG00000111725.11 chr12:119668403:+ ZNF839^ENSG00000022976.16 chr14:102325985:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1110:30367:9519 . YES_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chr12--chr14]""]" chr12:119668403-chr14:102325985 False 0 Read count too low: 1 < 5 FAIL 1
PRIMPOL--NEIL3 1 0 1.0 0.0 ONLY_REF_SPLICE PRIMPOL^ENSG00000164306.11 chr4:184691712:+ NEIL3^ENSG00000109674.4 chr4:177353308:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1217:51935:18207 . YES_LDAS 0.0102 GT 1.7968 AG 1.9656 "[""INTRACHROMOSOMAL[chr4:7.29Mb]""]" chr4:184691712-chr4:177353308 False 0 Read count too low: 1 < 5 FAIL 1
PREX1--ZMYND8 1 0 1.0 0.0 ONLY_REF_SPLICE PREX1^ENSG00000124126.14 chr20:48827642:- ZMYND8^ENSG00000101040.19 chr20:47347926:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1353:47089:6563 . NO_LDAS 0.0102 GT 1.8256 AG 1.8892 "[""INTRACHROMOSOMAL[chr20:1.27Mb]""]" chr20:48827642-chr20:47347926 False 0 Read count too low: 1 < 5 FAIL 1
PREX1--ABHD12 1 0 1.0 0.0 ONLY_REF_SPLICE PREX1^ENSG00000124126.14 chr20:48827642:- ABHD12^ENSG00000100997.20 chr20:25339351:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2438:9397:17927 . YES_LDAS 0.0102 GT 1.8256 AG 1.7232 "[""INTRACHROMOSOMAL[chr20:23.23Mb]""]" chr20:48827642-chr20:25339351 False 0 Read count too low: 1 < 5 FAIL 1
PRDX2--CSNK1D 1 0 1.0 0.0 ONLY_REF_SPLICE PRDX2^ENSG00000167815.12 chr19:12799859:- CSNK1D^ENSG00000141551.14 chr17:82255577:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1488:11210:2962 . NO_LDAS 0.0102 GT 1.6895 AG 1.8295 "[""INTERCHROMOSOMAL[chr19--chr17]""]" chr19:12799859-chr17:82255577 False 0 Read count too low: 1 < 5 FAIL 1
PRDM2--MAST2 1 0 1.0 0.0 ONLY_REF_SPLICE PRDM2^ENSG00000116731.22 chr1:13749487:+ MAST2^ENSG00000086015.22 chr1:45959386:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1145:2497:11551 . YES_LDAS 0.0102 GT 1.5656 AG 1.9329 "[""INTRACHROMOSOMAL[chr1:31.96Mb]""]" chr1:13749487-chr1:45959386 False 0 Read count too low: 1 < 5 FAIL 1
PRDM15--B2M 1 0 1.0 0.0 ONLY_REF_SPLICE PRDM15^ENSG00000141956.14 chr21:41879270:- B2M^ENSG00000166710.21 chr15:44715423:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2374:49928:15152 . YES_LDAS 0.0102 GT 1.8892 AG 1.9329 "[""INTERCHROMOSOMAL[chr21--chr15]""]" chr21:41879270-chr15:44715423 False 0 Read count too low: 1 < 5 FAIL 1
PRCC--TXNL1 1 0 1.0 0.0 ONLY_REF_SPLICE PRCC^ENSG00000143294.15 chr1:156768239:+ TXNL1^ENSG00000091164.13 chr18:56611097:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2386:13572:3214 . YES_LDAS 0.0102 GT 1.8256 AG 1.8295 "[""INTERCHROMOSOMAL[chr1--chr18]""]" chr1:156768239-chr18:56611097 False 0 Read count too low: 1 < 5 FAIL 1
PRCC--IL21R 1 0 1.0 0.0 INCL_NON_REF_SPLICE PRCC^ENSG00000143294.15 chr1:156796654:+ IL21R^ENSG00000103522.16 chr16:27403109:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1336:11315:23294 . NO_LDAS 0.0102 GT 1.6402 AG 1.7465 "[""INTERCHROMOSOMAL[chr1--chr16]""]" chr1:156796654-chr16:27403109 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PPP6R1--WIZ 1 0 0.5 0.0 INCL_NON_REF_SPLICE PPP6R1^ENSG00000105063.19 chr19:55236650:- WIZ^ENSG00000011451.21 chr19:15430089:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1286:24712:4965 . NO_LDAS 0.0051 GT 1.8323 AG 1.7465 "[""INTRACHROMOSOMAL[chr19:39.78Mb]""]" chr19:55236650-chr19:15430089 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PPP6R1--RNF207-AS1 1 0 0.5 0.0 INCL_NON_REF_SPLICE PPP6R1^ENSG00000105063.19 chr19:55236650:- RNF207-AS1^ENSG00000226944.1 chr1:6204890:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1286:24712:4965 . NO_LDAS 0.0051 GT 1.8323 AG 1.6729 "[""INTERCHROMOSOMAL[chr19--chr1]""]" chr19:55236650-chr1:6204890 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PPP4R3B--CFAP36 1 0 1.0 0.0 ONLY_REF_SPLICE PPP4R3B^ENSG00000275052.5 chr2:55617144:- CFAP36^ENSG00000163001.12 chr2:55523721:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2228:11525:8104 . YES_LDAS 0.0102 GT 1.7465 AG 1.8256 "[""INTRACHROMOSOMAL[chr2:0.00Mb]"",""LOCAL_INVERSION:-:+:[2213]""]" chr2:55617144-chr2:55523721 False 0 Read count too low: 1 < 5 FAIL 1
PPP3R1--CRIM1 1 0 1.0 0.0 ONLY_REF_SPLICE PPP3R1^ENSG00000221823.11 chr2:68217092:- CRIM1^ENSG00000150938.10 chr2:36522092:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2396:43602:2766 . YES_LDAS 0.0102 GT 1.9329 AG 1.9086 "[""INTRACHROMOSOMAL[chr2:31.63Mb]""]" chr2:68217092-chr2:36522092 False 0 Read count too low: 1 < 5 FAIL 1
PPP3CC--ZDHHC2 1 0 1.0 0.0 ONLY_REF_SPLICE PPP3CC^ENSG00000120910.15 chr8:22441458:+ ZDHHC2^ENSG00000104219.13 chr8:17184789:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1460:7278:27203 . YES_LDAS 0.0102 GT 1.9086 AG 1.9219 "[""INTRACHROMOSOMAL[chr8:5.22Mb]""]" chr8:22441458-chr8:17184789 False 0 Read count too low: 1 < 5 FAIL 1
PPP2R3B--ARFGAP2 1 0 1.0 0.0 ONLY_REF_SPLICE PPP2R3B^ENSG00000167393.18 chrX:345516:- ARFGAP2^ENSG00000149182.15 chr11:47172333:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2218:8702:29249 . NO_LDAS 0.0102 GT 1.8256 AG 1.7968 "[""INTERCHROMOSOMAL[chrY--chr11]""]" chrX:345516-chr11:47172333 False 0 Read count too low: 1 < 5 FAIL 1
PPP2R2D--AC025048.6 1 0 1.0 0.0 INCL_NON_REF_SPLICE PPP2R2D^ENSG00000175470.20 chr10:131901055:+ AC025048.6^ENSG00000280852.2 chr17:60102691:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1268:23927:25185 . YES_LDAS 0.0102 GT 1.231 AG 1.1589 "[""INTERCHROMOSOMAL[chr10--chr17]""]" chr10:131901055-chr17:60102691 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PPP2R1A--ATG4D 1 0 1.0 0.0 INCL_NON_REF_SPLICE PPP2R1A^ENSG00000105568.18 chr19:52216576:+ ATG4D^ENSG00000130734.10 chr19:10552939:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1310:11695:2625 . YES_LDAS 0.0102 GT 1.7465 AG 1.9086 "[""INTRACHROMOSOMAL[chr19:41.64Mb]""]" chr19:52216576-chr19:10552939 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PPP1R36--UBE2D3 1 0 1.0 0.0 INCL_NON_REF_SPLICE PPP1R36^ENSG00000165807.8 chr14:64587108:+ UBE2D3^ENSG00000109332.20 chr4:102801488:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1330:39080:5022 . NO_LDAS 0.0102 GT 1.6895 AG 1.9656 "[""INTERCHROMOSOMAL[chr14--chr4]""]" chr14:64587108-chr4:102801488 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PPP1R18--PEX26 1 0 1.0 0.0 INCL_NON_REF_SPLICE PPP1R18^ENSG00000146112.12 chr6:30685706:- PEX26^ENSG00000215193.14 chr22:18088139:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2219:16622:24723 . NO_LDAS 0.0102 GT 1.4566 AG 1.7056 "[""INTERCHROMOSOMAL[chr6--chr22]""]" chr6:30685706-chr22:18088139 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PPP1R16B--BTBD1 1 0 1.0 0.0 ONLY_REF_SPLICE PPP1R16B^ENSG00000101445.10 chr20:38836175:+ BTBD1^ENSG00000064726.10 chr15:83030328:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1298:34687:2037 . YES_LDAS 0.0102 GT 1.5656 AG 1.9086 "[""INTERCHROMOSOMAL[chr20--chr15]""]" chr20:38836175-chr15:83030328 False 0 Read count too low: 1 < 5 FAIL 1
PPP1R12A--PLXNC1 1 0 1.0 0.0 ONLY_REF_SPLICE PPP1R12A^ENSG00000058272.19 chr12:79934695:- PLXNC1^ENSG00000136040.9 chr12:94220016:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2411:43197:5988 . YES_LDAS 0.0102 GT 1.8295 AG 1.9656 "[""INTRACHROMOSOMAL[chr12:14.21Mb]""]" chr12:79934695-chr12:94220016 False 0 Read count too low: 1 < 5 FAIL 1
PPP1R12A--NEDD1 1 0 1.0 0.0 ONLY_REF_SPLICE PPP1R12A^ENSG00000058272.19 chr12:79934695:- NEDD1^ENSG00000139350.12 chr12:96936611:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1263:40665:15419 . NO_LDAS 0.0102 GT 1.8295 AG 1.9086 "[""INTRACHROMOSOMAL[chr12:16.97Mb]""]" chr12:79934695-chr12:96936611 False 0 Read count too low: 1 < 5 FAIL 1
PPP1CB--BABAM2 1 0 1.0 0.0 ONLY_REF_SPLICE PPP1CB^ENSG00000213639.10 chr2:28752176:+ BABAM2^ENSG00000158019.21 chr2:28338450:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2248:35107:9407 . YES_LDAS 0.0102 GT 1.6895 AG 1.9086 "[""DEEPEST2019"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr2:0.41Mb]""]" chr2:28752176-chr2:28338450 False 0 Read count too low: 1 < 5 FAIL 1
PPM1K--HERC6 1 0 1.0 0.0 ONLY_REF_SPLICE PPM1K^ENSG00000163644.15 chr4:88268741:- HERC6^ENSG00000138642.15 chr4:88424595:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2125:16169:28002 . YES_LDAS 0.0102 GT 1.1589 AG 1.8323 "[""INTRACHROMOSOMAL[chr4:0.09Mb]"",""LOCAL_INVERSION:-:+:[93970]""]" chr4:88268741-chr4:88424595 False 0 Read count too low: 1 < 5 FAIL 1
PPM1A--ACKR2 1 0 1.0 0.0 INCL_NON_REF_SPLICE PPM1A^ENSG00000100614.18 chr14:60285734:+ ACKR2^ENSG00000144648.16 chr3:42864919:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2316:19445:7109 . NO_LDAS 0.0102 GT 1.9656 AG 1.9656 "[""INTERCHROMOSOMAL[chr14--chr3]""]" chr14:60285734-chr3:42864919 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PPHLN1--VEZT 1 0 1.0 0.0 ONLY_REF_SPLICE PPHLN1^ENSG00000134283.18 chr12:42335974:+ VEZT^ENSG00000028203.18 chr12:95251940:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1307:28182:3634 . YES_LDAS 0.0102 GT 1.9656 AG 1.5656 "[""INTRACHROMOSOMAL[chr12:52.76Mb]""]" chr12:42335974-chr12:95251940 False 0 Read count too low: 1 < 5 FAIL 1
PPFIA1--HSPH1 1 0 1.0 0.0 INCL_NON_REF_SPLICE PPFIA1^ENSG00000131626.19 chr11:70324941:+ HSPH1^ENSG00000120694.20 chr13:31161530:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2260:42995:10907 . YES_LDAS 0.0102 GT 1.9086 AG 1.2729 "[""INTERCHROMOSOMAL[chr11--chr13]""]" chr11:70324941-chr13:31161530 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
POLRMT--AC018470.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE POLRMT^ENSG00000099821.14 chr19:622582:- AC018470.1^ENSG00000280414.1 chr2:174334840:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1363:16735:15251 . NO_LDAS 0.0102 GT 1.6895 AG 1.2729 "[""INTERCHROMOSOMAL[chr19--chr2]""]" chr19:622582-chr2:174334840 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
POLR2M--ZFPL1 1 0 1.0 0.0 INCL_NON_REF_SPLICE POLR2M^ENSG00000255529.9 chr15:57709356:+ ZFPL1^ENSG00000162300.13 chr11:65086489:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2288:22236:6731 . NO_LDAS 0.0102 GT 1.3383 AG 1.9219 "[""INTERCHROMOSOMAL[chr15--chr11]""]" chr15:57709356-chr11:65086489 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
POLR2J2--UBE2N 1 0 0.33 0.0 INCL_NON_REF_SPLICE POLR2J2^ENSG00000228049.7 chr7:102666077:- UBE2N^ENSG00000177889.10 chr12:93411299:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1217:29622:15461 . YES_LDAS 0.0034 GT 1.9086 AG 1.9899 "[""INTERCHROMOSOMAL[chr7--chr12]""]" chr7:102666077-chr12:93411299 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
POLR2J2--MAPK8IP3 1 0 0.5 0.0 INCL_NON_REF_SPLICE POLR2J2^ENSG00000228049.7 chr7:102666077:- MAPK8IP3^ENSG00000138834.14 chr16:1724557:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1441:4066:19622 . NO_LDAS 0.0051 GT 1.9086 AG 1.6895 "[""INTERCHROMOSOMAL[chr7--chr16]""]" chr7:102666077-chr16:1724557 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
POLR2J--ZADH2 1 0 0.25 0.0 ONLY_REF_SPLICE POLR2J^ENSG00000005075.15 chr7:102474361:- ZADH2^ENSG00000180011.7 chr18:75202340:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1153:20982:8539 . YES_LDAS 0.0026 GT 1.8295 AG 1.4566 "[""INTERCHROMOSOMAL[chr7--chr18]""]" chr7:102474361-chr18:75202340 False 0 Read count too low: 1 < 5 FAIL 1
POLR2G--RCOR3 1 0 1.0 0.0 INCL_NON_REF_SPLICE POLR2G^ENSG00000168002.12 chr11:62765405:+ RCOR3^ENSG00000117625.14 chr1:211315732:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1311:16282:25227 . NO_LDAS 0.0102 GT 1.6895 AG 1.6402 "[""INTERCHROMOSOMAL[chr11--chr1]""]" chr11:62765405-chr1:211315732 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
POLE2--SNAPC1 1 0 1.0 0.0 INCL_NON_REF_SPLICE POLE2^ENSG00000100479.13 chr14:49664626:- SNAPC1^ENSG00000023608.5 chr14:61796334:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2208:45414:25942 . NO_LDAS 0.0102 GT 1.9329 AG 1.7819 "[""INTRACHROMOSOMAL[chr14:12.07Mb]""]" chr14:49664626-chr14:61796334 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
POLE2--SEPSECS 1 0 1.0 0.0 INCL_NON_REF_SPLICE POLE2^ENSG00000100479.13 chr14:49679721:- SEPSECS^ENSG00000109618.13 chr4:25159107:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2179:39104:22635 . YES_LDAS 0.0102 GT 1.7819 AG 1.8892 "[""INTERCHROMOSOMAL[chr14--chr4]""]" chr14:49679721-chr4:25159107 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
POLDIP2--SYNC 1 0 1.0 0.0 INCL_NON_REF_SPLICE POLDIP2^ENSG00000004142.12 chr17:28349083:- SYNC^ENSG00000162520.15 chr1:32681457:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2180:49208:19650 . NO_LDAS 0.0102 GT 1.9219 AG 1.7232 "[""INTERCHROMOSOMAL[chr17--chr1]""]" chr17:28349083-chr1:32681457 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
POLD1--RPLP0 1 0 0.5 0.0 ONLY_REF_SPLICE POLD1^ENSG00000062822.15 chr19:50413879:+ RPLP0^ENSG00000089157.16 chr12:120197462:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1357:30601:4433 . YES_LDAS 0.0051 GT 1.8062 AG 1.9086 "[""INTERCHROMOSOMAL[chr19--chr12]""]" chr19:50413879-chr12:120197462 False 0 Read count too low: 1 < 5 FAIL 1
POLA2--SEC31B 1 0 1.0 0.0 ONLY_REF_SPLICE POLA2^ENSG00000014138.9 chr11:65295990:+ SEC31B^ENSG00000075826.17 chr10:100506420:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1237:12650:6717 . YES_LDAS 0.0102 GT 1.9329 AG 1.8323 "[""INTERCHROMOSOMAL[chr11--chr10]""]" chr11:65295990-chr10:100506420 False 0 Read count too low: 1 < 5 FAIL 1
PNISR--RELCH 1 0 1.0 0.0 ONLY_REF_SPLICE PNISR^ENSG00000132424.17 chr6:99404603:- RELCH^ENSG00000134444.15 chr18:62258512:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2121:20982:18796 . YES_LDAS 0.0102 GT 1.4566 AG 1.3996 "[""INTERCHROMOSOMAL[chr6--chr18]""]" chr6:99404603-chr18:62258512 False 0 Read count too low: 1 < 5 FAIL 1
PMFBP1--B4GALNT4 1 0 1.0 0.0 INCL_NON_REF_SPLICE PMFBP1^ENSG00000118557.16 chr16:72124767:- B4GALNT4^ENSG00000182272.12 chr11:373255:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1353:48335:27105 . NO_LDAS 0.0102 GT 1.5628 AG 1.6729 "[""INTERCHROMOSOMAL[chr16--chr11]""]" chr16:72124767-chr11:373255 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PLXNC1--TMCC3 1 0 1.0 0.0 ONLY_REF_SPLICE PLXNC1^ENSG00000136040.9 chr12:94260840:+ TMCC3^ENSG00000057704.13 chr12:94571737:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2141:16096:25718 . YES_LDAS 0.0102 GT 1.8062 AG 1.9899 "[""INTRACHROMOSOMAL[chr12:0.26Mb]""]" chr12:94260840-chr12:94571737 False 0 Read count too low: 1 < 5 FAIL 1
PLXNA3--ZNF384 1 0 1.0 0.0 INCL_NON_REF_SPLICE PLXNA3^ENSG00000130827.6 chrX:154472698:+ ZNF384^ENSG00000126746.17 chr12:6670838:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1173:28894:8062 . YES_LDAS 0.0102 GT 1.7465 AG 1.9656 "[""INTERCHROMOSOMAL[chrX--chr12]""]" chrX:154472698-chr12:6670838 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PLXNA3--SOBP 1 0 1.0 0.0 INCL_NON_REF_SPLICE PLXNA3^ENSG00000130827.6 chrX:154468969:+ SOBP^ENSG00000112320.12 chr6:107634116:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1365:34056:27932 . NO_LDAS 0.0102 GT 1.8892 AG 1.4256 "[""INTERCHROMOSOMAL[chrX--chr6]""]" chrX:154468969-chr6:107634116 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PLOD1--ZBTB8OS 1 0 1.0 0.0 ONLY_REF_SPLICE PLOD1^ENSG00000083444.17 chr1:11934855:+ ZBTB8OS^ENSG00000176261.15 chr1:32634792:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2153:13151:1392 . YES_LDAS 0.0102 GT 1.5656 AG 1.9086 "[""INTRACHROMOSOMAL[chr1:20.62Mb]""]" chr1:11934855-chr1:32634792 False 0 Read count too low: 1 < 5 FAIL 1
PLOD1--PRKDC 1 0 1.0 0.0 ONLY_REF_SPLICE PLOD1^ENSG00000083444.17 chr1:11934855:+ PRKDC^ENSG00000253729.8 chr8:47904976:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1470:42995:22201 . YES_LDAS 0.0102 GT 1.5656 AG 1.9086 "[""INTERCHROMOSOMAL[chr1--chr8]""]" chr1:11934855-chr8:47904976 False 0 Read count too low: 1 < 5 FAIL 1
PLIN2--TRRAP 1 0 1.0 0.0 ONLY_REF_SPLICE PLIN2^ENSG00000147872.10 chr9:19123565:- TRRAP^ENSG00000196367.14 chr7:98912022:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1409:48399:21164 . NO_LDAS 0.0102 GT 1.8323 AG 1.8892 "[""INTERCHROMOSOMAL[chr9--chr7]""]" chr9:19123565-chr7:98912022 False 0 Read count too low: 1 < 5 FAIL 1
PLGLA--ATRX 1 0 0.33 0.0 INCL_NON_REF_SPLICE PLGLA^ENSG00000240935.6 chr2:106386375:+ ATRX^ENSG00000085224.23 chrX:77522388:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1466:21872:10556 . NO_LDAS 0.0034 GT 1.5329 AG 1.9656 "[""INTERCHROMOSOMAL[chr2--chrX]""]" chr2:106386375-chrX:77522388 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PLEKHM3--RNF32 1 0 1.0 0.0 INCL_NON_REF_SPLICE PLEKHM3^ENSG00000178385.15 chr2:207823300:- RNF32^ENSG00000105982.17 chr7:156676970:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1497:51239:6941 . NO_LDAS 0.0102 GT 0.6998 AG 1.8323 "[""INTERCHROMOSOMAL[chr2--chr7]""]" chr2:207823300-chr7:156676970 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PLEKHG7--TAB2 1 0 1.0 0.0 ONLY_REF_SPLICE PLEKHG7^ENSG00000187510.10 chr12:92707672:+ TAB2^ENSG00000055208.19 chr6:149346478:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2234:52113:25858 . NO_LDAS 0.0102 GT 1.8892 AG 1.6729 "[""INTERCHROMOSOMAL[chr12--chr6]""]" chr12:92707672-chr6:149346478 False 0 Read count too low: 1 < 5 FAIL 1
PLEKHG5--TNK2 1 0 1.0 0.0 ONLY_REF_SPLICE PLEKHG5^ENSG00000171680.23 chr1:6519445:- TNK2^ENSG00000061938.20 chr3:195888606:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1287:28514:18838 . YES_LDAS 0.0102 GT 1.9656 AG 1.5546 "[""INTERCHROMOSOMAL[chr1--chr3]""]" chr1:6519445-chr3:195888606 False 0 Read count too low: 1 < 5 FAIL 1
PLEKHG2--LAT2 1 0 1.0 0.0 ONLY_REF_SPLICE PLEKHG2^ENSG00000090924.15 chr19:39414195:+ LAT2^ENSG00000086730.17 chr7:74214822:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1225:28571:9127 . NO_LDAS 0.0102 GT 1.8892 AG 1.9656 "[""INTERCHROMOSOMAL[chr19--chr7]""]" chr19:39414195-chr7:74214822 False 0 Read count too low: 1 < 5 FAIL 1
PLD4--MTMR3 1 0 1.0 0.0 INCL_NON_REF_SPLICE PLD4^ENSG00000166428.14 chr14:104927230:+ MTMR3^ENSG00000100330.16 chr22:30002955:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2380:51805:26727 . NO_LDAS 0.0102 GT 1.7465 AG 1.9656 "[""INTERCHROMOSOMAL[chr14--chr22]""]" chr14:104927230-chr22:30002955 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PLCL2--TBC1D5 1 0 1.0 0.0 ONLY_REF_SPLICE PLCL2^ENSG00000154822.18 chr3:17042949:+ TBC1D5^ENSG00000131374.14 chr3:17384015:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1334:19947:11565 . NO_LDAS 0.0102 GT 1.9086 AG 1.9656 "[""INTRACHROMOSOMAL[chr3:0.07Mb]"",""LOCAL_INVERSION:+:-:[66558]""]" chr3:17042949-chr3:17384015 False 0 Read count too low: 1 < 5 FAIL 1
PLCL2--STT3B 1 0 1.0 0.0 ONLY_REF_SPLICE PLCL2^ENSG00000154822.18 chr3:16885366:+ STT3B^ENSG00000163527.10 chr3:31576396:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1239:32802:19510 . YES_LDAS 0.0102 GT 1.8892 AG 1.8323 "[""INTRACHROMOSOMAL[chr3:14.44Mb]""]" chr3:16885366-chr3:31576396 False 0 Read count too low: 1 < 5 FAIL 1
PLCL2--RFTN1 1 0 1.0 0.0 ONLY_REF_SPLICE PLCL2^ENSG00000154822.18 chr3:16885366:+ RFTN1^ENSG00000131378.14 chr3:16409483:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1380:43319:11187 . YES_LDAS 0.0102 GT 1.8892 AG 1.8295 "[""INTRACHROMOSOMAL[chr3:0.29Mb]""]" chr3:16885366-chr3:16409483 False 0 Read count too low: 1 < 5 FAIL 1
PLCL2--MIR924HG 1 0 1.0 0.0 INCL_NON_REF_SPLICE PLCL2^ENSG00000154822.18 chr3:17011338:+ MIR924HG^ENSG00000267374.2 chr18:39207224:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1293:31604:14634 . NO_LDAS 0.0102 GT 1.9899 AG 1.371 "[""INTERCHROMOSOMAL[chr3--chr18]""]" chr3:17011338-chr18:39207224 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PLCG2--ACSF3 1 0 1.0 0.0 ONLY_REF_SPLICE PLCG2^ENSG00000197943.10 chr16:81786182:+ ACSF3^ENSG00000176715.17 chr16:89100662:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1346:1186:26544 . YES_LDAS 0.0102 GT 1.9656 AG 1.7465 "[""INTRACHROMOSOMAL[chr16:7.13Mb]""]" chr16:81786182-chr16:89100662 False 0 Read count too low: 1 < 5 FAIL 1
PLCB2--CMYA5 1 0 1.0 0.0 INCL_NON_REF_SPLICE PLCB2^ENSG00000137841.12 chr15:40292064:- CMYA5^ENSG00000164309.15 chr5:79730398:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1132:16962:22117 . NO_LDAS 0.0102 GT 1.8295 AG 1.6402 "[""INTERCHROMOSOMAL[chr15--chr5]""]" chr15:40292064-chr5:79730398 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PLA1A--CNOT9 1 0 1.0 0.0 ONLY_REF_SPLICE PLA1A^ENSG00000144837.9 chr3:119613118:+ CNOT9^ENSG00000144580.14 chr2:218580561:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1359:23328:19188 . YES_LDAS 0.0102 GT 1.4295 AG 1.8892 "[""INTERCHROMOSOMAL[chr3--chr2]""]" chr3:119613118-chr2:218580561 False 0 Read count too low: 1 < 5 FAIL 1
PKP1--RPL28 1 0 1.0 0.0 INCL_NON_REF_SPLICE PKP1^ENSG00000081277.13 chr1:201330263:+ RPL28^ENSG00000108107.15 chr19:55388006:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1189:50228:18669 . NO_LDAS 0.0102 GT 1.4256 AG 1.8323 "[""INTERCHROMOSOMAL[chr1--chr19]""]" chr1:201330263-chr19:55388006 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PKNOX1--PHACTR4 1 0 1.0 0.0 INCL_NON_REF_SPLICE PKNOX1^ENSG00000160199.15 chr21:43030157:+ PHACTR4^ENSG00000204138.13 chr1:28489170:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1409:38869:18866 . NO_LDAS 0.0102 GT 1.5301 AG 1.9086 "[""INTERCHROMOSOMAL[chr21--chr1]""]" chr21:43030157-chr1:28489170 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PKN2--ACBD6 1 0 1.0 0.0 ONLY_REF_SPLICE PKN2^ENSG00000065243.20 chr1:88760376:+ ACBD6^ENSG00000230124.8 chr1:180314722:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1495:15060:15573 . YES_LDAS 0.0102 GT 1.8892 AG 1.7465 "[""INTRACHROMOSOMAL[chr1:91.43Mb]""]" chr1:88760376-chr1:180314722 False 0 Read count too low: 1 < 5 FAIL 1
PKN1--ASF1B 1 0 1.0 0.0 ONLY_REF_SPLICE PKN1^ENSG00000123143.13 chr19:14446561:+ ASF1B^ENSG00000105011.9 chr19:14126237:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1205:42793:24401 . YES_LDAS 0.0102 GT 1.8256 AG 1.8323 "[""INTRACHROMOSOMAL[chr19:0.30Mb]""]" chr19:14446561-chr19:14126237 False 0 Read count too low: 1 < 5 FAIL 1
PKHD1L1--RAD21 1 0 1.0 0.0 ONLY_REF_SPLICE PKHD1L1^ENSG00000205038.12 chr8:109527020:+ RAD21^ENSG00000164754.15 chr8:116866761:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2240:48003:12574 . YES_LDAS 0.0102 GT 1.5628 AG 1.1033 "[""INTRACHROMOSOMAL[chr8:7.31Mb]""]" chr8:109527020-chr8:116866761 False 0 Read count too low: 1 < 5 FAIL 1
PITPNM3--TNFRSF13B 1 0 1.0 0.0 INCL_NON_REF_SPLICE PITPNM3^ENSG00000091622.16 chr17:6455033:- TNFRSF13B^ENSG00000240505.9 chr17:16940489:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1430:5676:29221 . NO_LDAS 0.0102 GT 1.6895 AG 1.9219 "[""INTRACHROMOSOMAL[chr17:10.37Mb]""]" chr17:6455033-chr17:16940489 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PITPNA--PHLPP2 1 0 1.0 0.0 INCL_NON_REF_SPLICE PITPNA^ENSG00000174238.15 chr17:1548296:- PHLPP2^ENSG00000040199.18 chr16:71714964:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2172:26823:21458 . NO_LDAS 0.0102 GT 1.8892 AG 1.9086 "[""INTERCHROMOSOMAL[chr17--chr16]""]" chr17:1548296-chr16:71714964 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PINLYP--KCNN4 1 0 1.0 0.0 ONLY_REF_SPLICE PINLYP^ENSG00000234465.11 chr19:43581703:+ KCNN4^ENSG00000104783.14 chr19:43769829:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2228:36491:4321 . YES_LDAS 0.0102 GT 1.8892 AG 1.9329 "[""INTRACHROMOSOMAL[chr19:0.18Mb]""]" chr19:43581703-chr19:43769829 False 0 Read count too low: 1 < 5 FAIL 1
PIM3--DCAF8 1 0 1.0 0.0 ONLY_REF_SPLICE PIM3^ENSG00000198355.5 chr22:49961811:+ DCAF8^ENSG00000132716.19 chr1:160261350:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1205:29501:29095 . YES_LDAS 0.0102 GT 1.8892 AG 1.9329 "[""INTERCHROMOSOMAL[chr22--chr1]""]" chr22:49961811-chr1:160261350 False 0 Read count too low: 1 < 5 FAIL 1
PILRA--CEPT1 1 0 1.0 0.0 ONLY_REF_SPLICE PILRA^ENSG00000085514.16 chr7:100374433:+ CEPT1^ENSG00000134255.14 chr1:111147642:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2202:43408:22271 . YES_LDAS 0.0102 GT 1.8295 AG 1.7819 "[""INTERCHROMOSOMAL[chr7--chr1]""]" chr7:100374433-chr1:111147642 False 0 Read count too low: 1 < 5 FAIL 1
PIKFYVE--LRRC37BP1 1 0 1.0 0.0 INCL_NON_REF_SPLICE PIKFYVE^ENSG00000115020.17 chr2:208315513:+ LRRC37BP1^ENSG00000250462.8 chr17:30631924:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2472:12286:5778 . NO_LDAS 0.0102 GT 1.371 AG 1.9656 "[""INTERCHROMOSOMAL[chr2--chr17]""]" chr2:208315513-chr17:30631924 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PIKFYVE--AC211476.4 1 0 0.12 0.0 INCL_NON_REF_SPLICE PIKFYVE^ENSG00000115020.17 chr2:208336928:+ AC211476.4^ENSG00000277125.1 chr7:73065531:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2371:33894:2681 . YES_LDAS 0.0012 GT 1.2867 AG 1.8892 "[""INTERCHROMOSOMAL[chr2--chr7]""]" chr2:208336928-chr7:73065531 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PIK3CA--ZMAT3 1 0 1.0 0.0 ONLY_REF_SPLICE PIK3CA^ENSG00000121879.6 chr3:179148603:+ ZMAT3^ENSG00000172667.11 chr3:179004184:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2257:38149:23812 . YES_LDAS 0.0102 GT 1.5656 AG 1.9219 "[""INTRACHROMOSOMAL[chr3:0.08Mb]"",""LOCAL_INVERSION:+:-:[75899]""]" chr3:179148603-chr3:179004184 False 0 Read count too low: 1 < 5 FAIL 1
PIK3AP1--RCC1L 1 0 1.0 0.0 ONLY_REF_SPLICE PIK3AP1^ENSG00000155629.15 chr10:96709567:- RCC1L^ENSG00000274523.5 chr7:75043109:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1370:50826:7740 . YES_LDAS 0.0102 GT 1.9656 AG 1.8295 "[""INTERCHROMOSOMAL[chr10--chr7]""]" chr10:96709567-chr7:75043109 False 0 Read count too low: 1 < 5 FAIL 1
PIH1D1--PIGO 1 0 1.0 0.0 ONLY_REF_SPLICE PIH1D1^ENSG00000104872.11 chr19:49451485:- PIGO^ENSG00000165282.14 chr9:35095566:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1468:40018:9870 . YES_LDAS 0.0102 GT 1.8892 AG 1.9329 "[""INTERCHROMOSOMAL[chr19--chr9]""]" chr19:49451485-chr9:35095566 False 0 Read count too low: 1 < 5 FAIL 1
PIGF--WDR43 1 0 1.0 0.0 ONLY_REF_SPLICE PIGF^ENSG00000151665.13 chr2:46592475:- WDR43^ENSG00000163811.12 chr2:28927569:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2219:10837:23252 . YES_LDAS 0.0102 GT 1.7819 AG 1.8892 "[""INTRACHROMOSOMAL[chr2:17.63Mb]""]" chr2:46592475-chr2:28927569 False 0 Read count too low: 1 < 5 FAIL 1
PIGB--ENDOD1 1 0 1.0 0.0 ONLY_REF_SPLICE PIGB^ENSG00000069943.10 chr15:55341802:+ ENDOD1^ENSG00000149218.5 chr11:95128377:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1355:27988:19917 . NO_LDAS 0.0102 GT 1.5628 AG 1.8323 "[""INTERCHROMOSOMAL[chr15--chr11]""]" chr15:55341802-chr11:95128377 False 0 Read count too low: 1 < 5 FAIL 1
PIEZO2--ZSCAN21 1 0 0.33 0.0 ONLY_REF_SPLICE PIEZO2^ENSG00000154864.13 chr18:10797374:- ZSCAN21^ENSG00000166529.15 chr7:100051478:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1358:49443:10809 . YES_LDAS 0.0034 GT 1.9656 AG 1.8892 "[""INTERCHROMOSOMAL[chr18--chr7]""]" chr18:10797374-chr7:100051478 False 0 Read count too low: 1 < 5 FAIL 1
PIEZO2--FTX 1 0 0.33 0.0 ONLY_REF_SPLICE PIEZO2^ENSG00000154864.13 chr18:10797374:- FTX^ENSG00000230590.11 chrX:74029551:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1358:49443:10809 . YES_LDAS 0.0034 GT 1.9656 AG 1.8892 "[""INTERCHROMOSOMAL[chr18--chrX]""]" chr18:10797374-chrX:74029551 False 0 Read count too low: 1 < 5 FAIL 1
PIEZO2--AC022182.1 1 0 0.33 0.0 ONLY_REF_SPLICE PIEZO2^ENSG00000154864.13 chr18:10797374:- AC022182.1^ENSG00000254777.5 chr8:60964730:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1358:49443:10809 . YES_LDAS 0.0034 GT 1.9656 AG 1.8892 "[""INTERCHROMOSOMAL[chr18--chr8]""]" chr18:10797374-chr8:60964730 False 0 Read count too low: 1 < 5 FAIL 1
PICALM--SYTL2 1 0 1.0 0.0 ONLY_REF_SPLICE PICALM^ENSG00000073921.18 chr11:85974708:- SYTL2^ENSG00000137501.17 chr11:85758114:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2383:45851:10668 . YES_LDAS 0.0102 GT 1.9086 AG 1.8323 "[""INTRACHROMOSOMAL[chr11:0.15Mb]""]" chr11:85974708-chr11:85758114 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
PIAS2--KATNAL2 1 0 1.0 0.0 ONLY_REF_SPLICE PIAS2^ENSG00000078043.16 chr18:46827959:- KATNAL2^ENSG00000167216.17 chr18:46946057:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1487:7820:25676 . YES_LDAS 0.0102 GT 1.5219 AG 1.8062 "[""INTRACHROMOSOMAL[chr18:0.00Mb]"",""NEIGHBORS_OVERLAP:-:+:[2668]""]" chr18:46827959-chr18:46946057 False 0 Read count too low: 1 < 5 FAIL 1
PHYKPL--PTPN6 1 0 1.0 0.0 ONLY_REF_SPLICE PHYKPL^ENSG00000175309.15 chr5:178232492:- PTPN6^ENSG00000111679.17 chr12:6960088:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1404:27713:8539 . YES_LDAS 0.0102 GT 1.9329 AG 1.9656 "[""INTERCHROMOSOMAL[chr5--chr12]""]" chr5:178232492-chr12:6960088 False 0 Read count too low: 1 < 5 FAIL 1
PHOSPHO1--RPS13 1 0 0.5 0.0 INCL_NON_REF_SPLICE PHOSPHO1^ENSG00000173868.12 chr17:49228986:- RPS13^ENSG00000110700.7 chr11:17074452:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1311:48213:21178 . YES_LDAS 0.0051 GT 1.4295 AG 1.5301 "[""INTERCHROMOSOMAL[chr17--chr11]""]" chr17:49228986-chr11:17074452 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PHIP--SRGAP3 1 0 1.0 0.0 INCL_NON_REF_SPLICE PHIP^ENSG00000146247.14 chr6:78945323:- SRGAP3^ENSG00000196220.16 chr3:8984690:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2373:48691:19903 . NO_LDAS 0.0102 GT 1.8256 AG 1.8295 "[""INTERCHROMOSOMAL[chr6--chr3]""]" chr6:78945323-chr3:8984690 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PGRMC2--CCNQ 1 0 1.0 0.0 INCL_NON_REF_SPLICE PGRMC2^ENSG00000164040.18 chr4:128287575:- CCNQ^ENSG00000262919.8 chrX:153594657:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2362:50478:24344 . YES_LDAS 0.0102 GT 1.7819 AG 1.9656 "[""INTERCHROMOSOMAL[chr4--chrX]""]" chr4:128287575-chrX:153594657 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PGD--MTOR 1 0 1.0 0.0 ONLY_REF_SPLICE PGD^ENSG00000142657.21 chr1:10400572:+ MTOR^ENSG00000198793.13 chr1:11216234:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1444:16161:20729 . YES_LDAS 0.0102 GT 1.9086 AG 1.8295 "[""INTRACHROMOSOMAL[chr1:0.69Mb]""]" chr1:10400572-chr1:11216234 False 0 Read count too low: 1 < 5 FAIL 1
PGAP2--STIM1 1 0 1.0 0.0 ONLY_REF_SPLICE PGAP2^ENSG00000148985.20 chr11:3808315:+ STIM1^ENSG00000167323.12 chr11:3967552:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1308:8087:13919 . NO_LDAS 0.0102 GT 1.7819 AG 1.8892 "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr11:0.03Mb]"",""NEIGHBORS[28156]""]" chr11:3808315-chr11:3967552 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
PGAP1--AGFG1 1 0 1.0 0.0 ONLY_REF_SPLICE PGAP1^ENSG00000197121.15 chr2:196926470:- AGFG1^ENSG00000173744.18 chr2:227491547:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2268:30593:24513 . YES_LDAS 0.0102 GT 1.9899 AG 1.9656 "[""INTRACHROMOSOMAL[chr2:30.54Mb]""]" chr2:196926470-chr2:227491547 False 0 Read count too low: 1 < 5 FAIL 1
PFKFB2--CNOT10 1 0 1.0 0.0 ONLY_REF_SPLICE PFKFB2^ENSG00000123836.15 chr1:207053366:+ CNOT10^ENSG00000182973.19 chr3:32764455:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2166:32122:19538 . YES_LDAS 0.0102 GT 1.6895 AG 1.8323 "[""INTERCHROMOSOMAL[chr1--chr3]""]" chr1:207053366-chr3:32764455 False 0 Read count too low: 1 < 5 FAIL 1
PES1--THOC5 1 0 1.0 0.0 INCL_NON_REF_SPLICE PES1^ENSG00000100029.18 chr22:30581012:- THOC5^ENSG00000100296.14 chr22:29544582:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1274:17487:28380 . NO_LDAS 0.0102 GT 1.9329 AG 1.7232 "[""INTRACHROMOSOMAL[chr22:1.02Mb]""]" chr22:30581012-chr22:29544582 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PER1--CYB5R3 1 0 1.0 0.0 ONLY_REF_SPLICE PER1^ENSG00000179094.16 chr17:8152337:- CYB5R3^ENSG00000100243.21 chr22:42636846:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1245:12997:7067 . YES_LDAS 0.0102 GT 1.8295 AG 1.8323 "[""INTERCHROMOSOMAL[chr17--chr22]""]" chr17:8152337-chr22:42636846 False 0 Read count too low: 1 < 5 FAIL 1
PEG10--SMYD5 1 0 0.2 0.0 INCL_NON_REF_SPLICE PEG10^ENSG00000242265.6 chr7:94665678:+ SMYD5^ENSG00000135632.12 chr2:73225675:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1436:37688:29179 . NO_LDAS 0.002 GT 1.8256 AG 1.371 "[""INTERCHROMOSOMAL[chr7--chr2]""]" chr7:94665678-chr2:73225675 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PDXK--TRAPPC10 1 0 1.0 0.0 ONLY_REF_SPLICE PDXK^ENSG00000160209.19 chr21:43719381:+ TRAPPC10^ENSG00000160218.13 chr21:44032091:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1420:11889:29389 . YES_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTRACHROMOSOMAL[chr21:0.25Mb]""]" chr21:43719381-chr21:44032091 False 0 Read count too low: 1 < 5 FAIL 1
PDXDC1--SNHG32 1 0 1.0 0.0 ONLY_REF_SPLICE PDXDC1^ENSG00000179889.19 chr16:15001788:+ SNHG32^ENSG00000204387.14 chr6:31835411:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2418:38020:20029 . NO_LDAS 0.0102 GT 1.7819 AG 1.8256 "[""INTERCHROMOSOMAL[chr16--chr6]""]" chr16:15001788-chr6:31835411 False 0 Read count too low: 1 < 5 FAIL 1
PDXDC1--NPIPA1 1 0 1.0 0.0 ONLY_REF_SPLICE PDXDC1^ENSG00000179889.19 chr16:15030056:+ NPIPA1^ENSG00000183426.17 chr16:14923655:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2317:2286:9702 . YES_LDAS 0.0102 GT 1.9329 AG 1.9086 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[22531]""]" chr16:15030056-chr16:14923655 False 0 Excluded annotation pattern: GTEx_recurrent_StarF2019 FAIL 1
PDXDC1--FAM160B1 1 0 0.5 0.0 ONLY_REF_SPLICE PDXDC1^ENSG00000179889.19 chr16:15030056:+ FAM160B1^ENSG00000151553.15 chr10:114843741:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2174:23458:11761 . YES_LDAS 0.0051 GT 1.9329 AG 1.9086 "[""INTERCHROMOSOMAL[chr16--chr10]""]" chr16:15030056-chr10:114843741 False 0 Read count too low: 1 < 5 FAIL 1
PDXDC1--AP006587.4 1 0 1.0 0.0 INCL_NON_REF_SPLICE PDXDC1^ENSG00000179889.19 chr16:15036476:+ AP006587.4^ENSG00000255550.1 chr11:49854594:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2441:17334:17184 . NO_LDAS 0.0102 GT 1.8892 AG 1.6729 "[""INTERCHROMOSOMAL[chr16--chr11]""]" chr16:15036476-chr11:49854594 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
PDS5B--N4BP2L2 1 0 1.0 0.0 ONLY_REF_SPLICE PDS5B^ENSG00000083642.19 chr13:32586593:+ N4BP2L2^ENSG00000244754.9 chr13:32480637:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2244:42696:10725 . YES_LDAS 0.0102 GT 1.7819 AG 1.7819 "[""INTRACHROMOSOMAL[chr13:0.05Mb]"",""LOCAL_INVERSION:+:-:[47567]""]" chr13:32586593-chr13:32480637 False 0 Read count too low: 1 < 5 FAIL 1
PDPK1--WHAMM 1 0 0.33 0.0 ONLY_REF_SPLICE PDPK1^ENSG00000140992.19 chr16:2586893:+ WHAMM^ENSG00000156232.7 chr15:82816692:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2382:26791:27567 . YES_LDAS 0.0034 GT 1.9656 AG 1.8256 "[""INTERCHROMOSOMAL[chr16--chr15]""]" chr16:2586893-chr15:82816692 False 0 Read count too low: 1 < 5 FAIL 1
PDIA5--ZNF148 1 0 1.0 0.0 ONLY_REF_SPLICE PDIA5^ENSG00000065485.20 chr3:123209399:+ ZNF148^ENSG00000163848.20 chr3:125315053:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1474:25124:5512 . YES_LDAS 0.0102 GT 1.3996 AG 1.8295 "[""INTRACHROMOSOMAL[chr3:2.00Mb]""]" chr3:123209399-chr3:125315053 False 0 Read count too low: 1 < 5 FAIL 1
PDIA4--UBE2K 1 0 0.5 0.0 INCL_NON_REF_SPLICE PDIA4^ENSG00000155660.11 chr7:149004178:- UBE2K^ENSG00000078140.14 chr4:39780587:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2456:50244:22341 . NO_LDAS 0.0051 GT 1.7056 AG 1.9656 "[""INTERCHROMOSOMAL[chr7--chr4]""]" chr7:149004178-chr4:39780587 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PDIA4--AMER3 1 0 0.5 0.0 INCL_NON_REF_SPLICE PDIA4^ENSG00000155660.11 chr7:149004178:- AMER3^ENSG00000178171.11 chr2:130762246:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2456:50244:22341 . NO_LDAS 0.0051 GT 1.7056 AG 1.8892 "[""INTERCHROMOSOMAL[chr7--chr2]""]" chr7:149004178-chr2:130762246 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PDE7A--URI1 1 0 1.0 0.0 ONLY_REF_SPLICE PDE7A^ENSG00000205268.11 chr8:65841371:- URI1^ENSG00000105176.18 chr19:29985223:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1242:20651:19174 . YES_LDAS 0.0102 GT 1.8892 AG 1.3996 "[""INTERCHROMOSOMAL[chr8--chr19]""]" chr8:65841371-chr19:29985223 False 0 Read count too low: 1 < 5 FAIL 1
PDCD4--TMED2 1 0 1.0 0.0 INCL_NON_REF_SPLICE PDCD4^ENSG00000150593.18 chr10:110875989:+ TMED2^ENSG00000086598.11 chr12:123586747:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2128:35609:22523 . NO_LDAS 0.0102 GT 1.9086 AG 1.9219 "[""INTERCHROMOSOMAL[chr10--chr12]""]" chr10:110875989-chr12:123586747 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PDCD10--STT3B 1 0 1.0 0.0 ONLY_REF_SPLICE PDCD10^ENSG00000114209.15 chr3:167704842:- STT3B^ENSG00000163527.10 chr3:31596798:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1382:45204:18123 . NO_LDAS 0.0102 GT 1.9656 AG 1.6402 "[""INTRACHROMOSOMAL[chr3:136.05Mb]""]" chr3:167704842-chr3:31596798 False 0 Read count too low: 1 < 5 FAIL 1
PDAP1--AC020743.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE PDAP1^ENSG00000106244.13 chr7:99404862:- AC020743.1^ENSG00000228005.1 chr7:50142833:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2464:36386:19160 . NO_LDAS 0.0102 GT 1.5219 AG 1.3753 "[""INTRACHROMOSOMAL[chr7:49.25Mb]""]" chr7:99404862-chr7:50142833 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PCYT1B--CLIC4 1 0 1.0 0.0 INCL_NON_REF_SPLICE PCYT1B^ENSG00000102230.14 chrX:24647266:- CLIC4^ENSG00000169504.15 chr1:24745424:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2232:37009:13345 . YES_LDAS 0.0102 GT 1.053 AG 1.8323 "[""INTERCHROMOSOMAL[chrX--chr1]""]" chrX:24647266-chr1:24745424 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PCNX4--CHL1 1 0 1.0 0.0 ONLY_REF_SPLICE PCNX4^ENSG00000126773.13 chr14:60125823:+ CHL1^ENSG00000134121.10 chr3:319683:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2140:29590:14508 . YES_LDAS 0.0102 GT 1.6895 AG 1.8892 "[""INTERCHROMOSOMAL[chr14--chr3]""]" chr14:60125823-chr3:319683 False 0 Read count too low: 1 < 5 FAIL 1
PCNT--RER1 1 0 1.0 0.0 ONLY_REF_SPLICE PCNT^ENSG00000160299.17 chr21:46324282:+ RER1^ENSG00000157916.20 chr1:2395784:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1366:34355:7376 . YES_LDAS 0.0102 GT 1.4566 AG 1.9086 "[""INTERCHROMOSOMAL[chr21--chr1]""]" chr21:46324282-chr1:2395784 False 0 Read count too low: 1 < 5 FAIL 1
PCNT--PTS 1 0 1.0 0.0 ONLY_REF_SPLICE PCNT^ENSG00000160299.17 chr21:46402483:+ PTS^ENSG00000150787.8 chr11:112230626:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2324:21201:7824 . NO_LDAS 0.0102 GT 1.8892 AG 1.9656 "[""INTERCHROMOSOMAL[chr21--chr11]""]" chr21:46402483-chr11:112230626 False 0 Read count too low: 1 < 5 FAIL 1
PCNT--AC127502.1 1 0 0.5 0.0 ONLY_REF_SPLICE PCNT^ENSG00000160299.17 chr21:46389431:+ AC127502.1^ENSG00000215302.8 chr15:30474356:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1113:25084:15391 . YES_LDAS 0.0051 GT 1.8256 AG 1.9656 "[""INTERCHROMOSOMAL[chr21--chr15]""]" chr21:46389431-chr15:30474356 False 0 Read count too low: 1 < 5 FAIL 1
PCMTD1--PXDNL 1 0 1.0 0.0 ONLY_REF_SPLICE PCMTD1^ENSG00000168300.14 chr8:51831444:- PXDNL^ENSG00000147485.13 chr8:51654760:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2145:11032:6016 . YES_LDAS 0.0102 GT 1.9329 AG 1.8256 "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr8:0.01Mb]"",""NEIGHBORS[8130]""]" chr8:51831444-chr8:51654760 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
PCED1B-AS1--USP48 1 0 1.0 0.0 ONLY_REF_SPLICE PCED1B-AS1^ENSG00000247774.7 chr12:47210640:- USP48^ENSG00000090686.16 chr1:21757783:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1289:18248:6885 . NO_LDAS 0.0102 GT 1.9329 AG 1.7465 "[""INTERCHROMOSOMAL[chr12--chr1]""]" chr12:47210640-chr1:21757783 False 0 Read count too low: 1 < 5 FAIL 1
PCED1B--YWHAQ 1 0 1.0 0.0 ONLY_REF_SPLICE PCED1B^ENSG00000179715.13 chr12:47216689:+ YWHAQ^ENSG00000134308.14 chr2:9585345:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2378:40536:8132 . YES_LDAS 0.0102 GT 1.8323 AG 1.9899 "[""INTERCHROMOSOMAL[chr12--chr2]""]" chr12:47216689-chr2:9585345 False 0 Read count too low: 1 < 5 FAIL 1
PCED1B--SMCR8 1 0 1.0 0.0 ONLY_REF_SPLICE PCED1B^ENSG00000179715.13 chr12:47216689:+ SMCR8^ENSG00000176994.11 chr17:18322617:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1248:18693:25311 . YES_LDAS 0.0102 GT 1.8323 AG 1.7465 "[""INTERCHROMOSOMAL[chr12--chr17]""]" chr12:47216689-chr17:18322617 False 0 Read count too low: 1 < 5 FAIL 1
PCDHGB2--SPATA18 1 0 1.0 0.0 INCL_NON_REF_SPLICE PCDHGB2^ENSG00000253910.2 chr5:141362556:+ SPATA18^ENSG00000163071.11 chr4:52084916:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1266:26192:28997 . YES_LDAS 0.0102 GT 1.7819 AG 1.8892 "[""INTERCHROMOSOMAL[chr5--chr4]""]" chr5:141362556-chr4:52084916 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PCCB--PIGQ 1 0 1.0 0.0 INCL_NON_REF_SPLICE PCCB^ENSG00000114054.14 chr3:136333994:+ PIGQ^ENSG00000007541.17 chr16:576138:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1287:22390:17450 . NO_LDAS 0.0102 GT 1.8323 AG 1.7819 "[""INTERCHROMOSOMAL[chr3--chr16]""]" chr3:136333994-chr16:576138 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PCAT19--CCDC61 1 0 1.0 0.0 INCL_NON_REF_SPLICE PCAT19^ENSG00000267107.8 chr19:41479610:- CCDC61^ENSG00000104983.8 chr19:46003008:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2318:18369:15279 . NO_LDAS 0.0102 GT 1.7819 AG 1.9656 "[""INTRACHROMOSOMAL[chr19:4.49Mb]""]" chr19:41479610-chr19:46003008 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PBX3--MAPKAP1 1 0 1.0 0.0 ONLY_REF_SPLICE PBX3^ENSG00000167081.18 chr9:125748623:+ MAPKAP1^ENSG00000119487.17 chr9:125672643:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2303:5409:3536 . YES_LDAS 0.0102 GT 1.5546 AG 1.7968 "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr9:0.04Mb]"",""LOCAL_INVERSION:+:-:[40111]""]" chr9:125748623-chr9:125672643 False 0 Read count too low: 1 < 5 FAIL 1
PATZ1--FGD5-AS1 1 0 1.0 0.0 INCL_NON_REF_SPLICE PATZ1^ENSG00000100105.18 chr22:31345549:- FGD5-AS1^ENSG00000225733.6 chr3:14946154:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1208:9130:9870 . YES_LDAS 0.0102 GT 1.9086 AG 1.7232 "[""INTERCHROMOSOMAL[chr22--chr3]""]" chr22:31345549-chr3:14946154 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PASK--FYCO1 1 0 1.0 0.0 INCL_NON_REF_SPLICE PASK^ENSG00000115687.14 chr2:241126223:- FYCO1^ENSG00000163820.15 chr3:45918450:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1342:2812:14452 . NO_LDAS 0.0102 GC 1.8892 AG 1.8062 "[""INTERCHROMOSOMAL[chr2--chr3]""]" chr2:241126223-chr3:45918450 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PARP14--PLEKHM1 1 0 1.0 0.0 ONLY_REF_SPLICE PARP14^ENSG00000173193.15 chr3:122720388:+ PLEKHM1^ENSG00000225190.11 chr17:45475726:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2228:4818:11705 . NO_LDAS 0.0102 GT 1.7465 AG 1.7819 "[""INTERCHROMOSOMAL[chr3--chr17]""]" chr3:122720388-chr17:45475726 False 0 Read count too low: 1 < 5 FAIL 1
PARN--EIF4A2 1 0 1.0 0.0 ONLY_REF_SPLICE PARN^ENSG00000140694.17 chr16:14552021:- EIF4A2^ENSG00000156976.17 chr3:186787127:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1262:46895:15222 . YES_LDAS 0.0102 GT 1.7465 AG 1.5656 "[""INTERCHROMOSOMAL[chr16--chr3]""]" chr16:14552021-chr3:186787127 False 0 Read count too low: 1 < 5 FAIL 1
PARL--MCCC1 1 0 1.0 0.0 ONLY_REF_SPLICE PARL^ENSG00000175193.14 chr3:183840570:- MCCC1^ENSG00000078070.13 chr3:183022554:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2451:23612:6563 . YES_LDAS 0.0102 GT 1.9656 AG 1.6402 "[""INTRACHROMOSOMAL[chr3:0.71Mb]""]" chr3:183840570-chr3:183022554 False 0 Read count too low: 1 < 5 FAIL 1
PARG--MTM1 1 0 1.0 0.0 ONLY_REF_SPLICE PARG^ENSG00000227345.9 chr10:49941509:- MTM1^ENSG00000171100.15 chrX:150638943:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1417:42356:20393 . YES_LDAS 0.0102 GT 1.7465 AG 1.6729 "[""INTERCHROMOSOMAL[chr10--chrX]""]" chr10:49941509-chrX:150638943 False 0 Read count too low: 1 < 5 FAIL 1
PARD6G-AS1--KBTBD2 1 0 1.0 0.0 INCL_NON_REF_SPLICE PARD6G-AS1^ENSG00000267270.6 chr18:80149066:+ KBTBD2^ENSG00000170852.11 chr7:32879942:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1373:42421:26474 . YES_LDAS 0.0102 GT 1.9086 AG 1.9329 "[""INTERCHROMOSOMAL[chr18--chr7]""]" chr18:80149066-chr7:32879942 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PARD6G--ARL6IP6 1 0 1.0 0.0 ONLY_REF_SPLICE PARD6G^ENSG00000178184.16 chr18:80202710:- ARL6IP6^ENSG00000177917.11 chr2:152719898:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1410:34776:29347 . YES_LDAS 0.0102 GT 1.8892 AG 1.9086 "[""INTERCHROMOSOMAL[chr18--chr2]""]" chr18:80202710-chr2:152719898 False 0 Read count too low: 1 < 5 FAIL 1
PARD3--CUL2 1 0 1.0 0.0 ONLY_REF_SPLICE PARD3^ENSG00000148498.16 chr10:34269657:- CUL2^ENSG00000108094.16 chr10:35035296:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2478:42138:23378 . YES_LDAS 0.0102 GT 1.9656 AG 1.8892 "[""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr10:0.19Mb]""]" chr10:34269657-chr10:35035296 False 0 Read count too low: 1 < 5 FAIL 1
PANK2--RSPRY1 1 0 1.0 0.0 ONLY_REF_SPLICE PANK2^ENSG00000125779.23 chr20:3912634:+ RSPRY1^ENSG00000159579.14 chr16:57204504:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1340:19599:6955 . YES_LDAS 0.0102 GT 1.8892 AG 1.9899 "[""INTERCHROMOSOMAL[chr20--chr16]""]" chr20:3912634-chr16:57204504 False 0 Read count too low: 1 < 5 FAIL 1
PAN3--AKAP11 1 0 1.0 0.0 ONLY_REF_SPLICE PAN3^ENSG00000152520.14 chr13:28197346:+ AKAP11^ENSG00000023516.9 chr13:42285986:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1485:20214:10234 . NO_LDAS 0.0102 GT 1.7232 AG 1.6402 "[""INTRACHROMOSOMAL[chr13:13.98Mb]""]" chr13:28197346-chr13:42285986 False 0 Read count too low: 1 < 5 FAIL 1
PAM16--TAF1D 1 0 1.0 0.0 INCL_NON_REF_SPLICE PAM16^ENSG00000217930.8 chr16:4340965:- TAF1D^ENSG00000166012.17 chr11:93730712:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1260:21363:19174 . NO_LDAS 0.0102 GT 1.8323 AG 1.8256 "[""INTERCHROMOSOMAL[chr16--chr11]""]" chr16:4340965-chr11:93730712 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PALM--PAK4 1 0 1.0 0.0 INCL_NON_REF_SPLICE PALM^ENSG00000099864.18 chr19:727694:+ PAK4^ENSG00000130669.17 chr19:39179865:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2446:37413:2471 . YES_LDAS 0.0102 GT 1.8892 AG 1.5656 "[""INTRACHROMOSOMAL[chr19:38.38Mb]""]" chr19:727694-chr19:39179865 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PAK2--YWHAG 1 0 1.0 0.0 ONLY_REF_SPLICE PAK2^ENSG00000180370.10 chr3:196740157:+ YWHAG^ENSG00000170027.7 chr7:76330233:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1453:13127:19286 . YES_LDAS 0.0102 GT 1.5656 AG 1.9086 "[""INTERCHROMOSOMAL[chr3--chr7]""]" chr3:196740157-chr7:76330233 False 0 Read count too low: 1 < 5 FAIL 1
PAFAH1B1--GRB2 1 0 1.0 0.0 ONLY_REF_SPLICE PAFAH1B1^ENSG00000007168.14 chr17:2676606:+ GRB2^ENSG00000177885.15 chr17:75332797:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2412:18369:1126 . YES_LDAS 0.0102 GT 1.8323 AG 1.8062 "[""INTRACHROMOSOMAL[chr17:72.63Mb]""]" chr17:2676606-chr17:75332797 False 0 Read count too low: 1 < 5 FAIL 1
PACS1--LINC02034 1 0 1.0 0.0 INCL_NON_REF_SPLICE PACS1^ENSG00000175115.13 chr11:66233066:+ LINC02034^ENSG00000282975.1 chr3:127540379:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1157:6461:7067 . NO_LDAS 0.0102 GT 1.8892 AG 1.9656 "[""INTERCHROMOSOMAL[chr11--chr3]""]" chr11:66233066-chr3:127540379 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
P4HTM--TALDO1 1 0 1.0 0.0 ONLY_REF_SPLICE P4HTM^ENSG00000178467.18 chr3:48990914:+ TALDO1^ENSG00000177156.11 chr11:755879:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1420:21880:25059 . YES_LDAS 0.0102 GT 1.8062 AG 1.9086 "[""INTERCHROMOSOMAL[chr3--chr11]""]" chr3:48990914-chr11:755879 False 0 Read count too low: 1 < 5 FAIL 1
P4HA3-AS1--SLC44A1 1 0 1.0 0.0 ONLY_REF_SPLICE P4HA3-AS1^ENSG00000246211.2 chr11:74311449:+ SLC44A1^ENSG00000070214.16 chr9:105299220:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1276:16614:14872 . NO_LDAS 0.0102 GT 1.5546 AG 1.7465 "[""INTERCHROMOSOMAL[chr11--chr9]""]" chr11:74311449-chr9:105299220 False 0 Read count too low: 1 < 5 FAIL 1
P2RY8--COL2A1 1 0 1.0 0.0 INCL_NON_REF_SPLICE P2RY8^ENSG00000182162.11 chrX:1465854:- COL2A1^ENSG00000139219.19 chr12:47985800:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2166:43626:21332 . NO_LDAS 0.0102 GT 1.3996 AG 1.585 "[""INTERCHROMOSOMAL[chrX--chr12]""]" chrX:1465854-chr12:47985800 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
P2RX4--MGST1 1 0 1.0 0.0 ONLY_REF_SPLICE P2RX4^ENSG00000135124.15 chr12:121210298:+ MGST1^ENSG00000008394.13 chr12:16357605:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1132:48585:19468 . NO_LDAS 0.0102 GT 1.9086 AG 1.8892 "[""INTRACHROMOSOMAL[chr12:104.60Mb]""]" chr12:121210298-chr12:16357605 False 0 Read count too low: 1 < 5 FAIL 1
OXTR--ABHD17C 1 0 1.0 0.0 ONLY_REF_SPLICE OXTR^ENSG00000180914.11 chr3:8767266:- ABHD17C^ENSG00000136379.12 chr15:80749513:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2314:44767:15040 . YES_LDAS 0.0102 GT 1.585 AG 1.8892 "[""INTERCHROMOSOMAL[chr3--chr15]""]" chr3:8767266-chr15:80749513 False 0 Read count too low: 1 < 5 FAIL 1
OXR1--AZIN1 1 0 1.0 0.0 ONLY_REF_SPLICE OXR1^ENSG00000164830.19 chr8:106658185:+ AZIN1^ENSG00000155096.14 chr8:102858150:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2491:20796:8384 . NO_LDAS 0.0102 GT 1.6895 AG 1.9899 "[""INTRACHROMOSOMAL[chr8:3.38Mb]""]" chr8:106658185-chr8:102858150 False 0 Read count too low: 1 < 5 FAIL 1
OSBPL3--CCM2 1 0 1.0 0.0 ONLY_REF_SPLICE OSBPL3^ENSG00000070882.13 chr7:24979886:- CCM2^ENSG00000136280.17 chr7:45038253:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2107:36151:16540 . YES_LDAS 0.0102 GT 1.8892 AG 1.9329 "[""INTRACHROMOSOMAL[chr7:20.02Mb]""]" chr7:24979886-chr7:45038253 False 0 Read count too low: 1 < 5 FAIL 1
OSBP2--ZZEF1 1 0 1.0 0.0 INCL_NON_REF_SPLICE OSBP2^ENSG00000184792.16 chr22:30887506:+ ZZEF1^ENSG00000074755.15 chr17:4114419:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2406:38052:12378 . YES_LDAS 0.0102 GT 1.5301 AG 1.9329 "[""INTERCHROMOSOMAL[chr22--chr17]""]" chr22:30887506-chr17:4114419 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
OSBP2--PSME3IP1 1 0 1.0 0.0 ONLY_REF_SPLICE OSBP2^ENSG00000184792.16 chr22:30773245:+ PSME3IP1^ENSG00000172775.17 chr16:57173869:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2359:13224:27273 . NO_LDAS 0.0102 GT 1.9656 AG 1.5546 "[""INTERCHROMOSOMAL[chr22--chr16]""]" chr22:30773245-chr16:57173869 False 0 Read count too low: 1 < 5 FAIL 1
OR2T2--BRAF 1 0 1.0 0.0 ONLY_REF_SPLICE OR2T2^ENSG00000196240.5 chr1:248449392:+ BRAF^ENSG00000157764.14 chr7:140850212:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1292:28004:23644 . YES_LDAS 0.0102 GT 1.6402 AG 1.8062 "[""INTERCHROMOSOMAL[chr1--chr7]""]" chr1:248449392-chr7:140850212 False 0 Read count too low: 1 < 5 FAIL 1
OPA3--CHI3L2 1 0 1.0 0.0 ONLY_REF_SPLICE OPA3^ENSG00000125741.5 chr19:45584623:- CHI3L2^ENSG00000064886.14 chr1:111230742:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1206:43149:21430 . YES_LDAS 0.0102 GT 1.7232 AG 1.9086 "[""INTERCHROMOSOMAL[chr19--chr1]""]" chr19:45584623-chr1:111230742 False 0 Read count too low: 1 < 5 FAIL 1
OPA1--RIPK1 1 0 1.0 0.0 INCL_NON_REF_SPLICE OPA1^ENSG00000198836.11 chr3:193647180:+ RIPK1^ENSG00000137275.16 chr6:3084951:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2415:29849:20954 . NO_LDAS 0.0102 GT 1.9086 AG 1.8892 "[""INTERCHROMOSOMAL[chr3--chr6]""]" chr3:193647180-chr6:3084951 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
OOEP--MCM9 1 0 1.0 0.0 INCL_NON_REF_SPLICE OOEP^ENSG00000203907.10 chr6:73394710:- MCM9^ENSG00000111877.18 chr6:118894359:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2340:31580:7726 . NO_LDAS 0.0102 GT 1.8892 AG 1.5628 "[""INTRACHROMOSOMAL[chr6:45.42Mb]""]" chr6:73394710-chr6:118894359 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
OGFR--CTBP1 1 0 1.0 0.0 ONLY_REF_SPLICE OGFR^ENSG00000060491.17 chr20:62808325:+ CTBP1^ENSG00000159692.16 chr4:1212423:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2179:51263:8805 . YES_LDAS 0.0102 GT 1.8295 AG 1.7819 "[""INTERCHROMOSOMAL[chr20--chr4]""]" chr20:62808325-chr4:1212423 False 0 Read count too low: 1 < 5 FAIL 1
ODF2--IL1R1 1 0 1.0 0.0 INCL_NON_REF_SPLICE ODF2^ENSG00000136811.16 chr9:128496141:+ IL1R1^ENSG00000115594.12 chr2:102176417:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2490:39371:13093 . NO_LDAS 0.0102 GT 1.6895 AG 1.9219 "[""INTERCHROMOSOMAL[chr9--chr2]""]" chr9:128496141-chr2:102176417 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
OBSCN--MRPS31 1 0 0.5 0.0 INCL_NON_REF_SPLICE OBSCN^ENSG00000154358.23 chr1:228269711:+ MRPS31^ENSG00000102738.8 chr13:40754092:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2238:51045:27035 . YES_LDAS 0.0051 GT 1.3996 AG 1.6402 "[""INTERCHROMOSOMAL[chr1--chr13]""]" chr1:228269711-chr13:40754092 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
OAZ2--ZNF609 1 0 1.0 0.0 ONLY_REF_SPLICE OAZ2^ENSG00000180304.14 chr15:64703029:- ZNF609^ENSG00000180357.9 chr15:64499293:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2298:5037:3032 . YES_LDAS 0.0102 GT 1.5058 AG 1.9656 "[""INTRACHROMOSOMAL[chr15:0.00Mb]"",""LOCAL_INVERSION:-:+:[1505]""]" chr15:64703029-chr15:64499293 False 0 Read count too low: 1 < 5 FAIL 1
OAZ1--XPO1 1 0 1.0 0.0 ONLY_REF_SPLICE OAZ1^ENSG00000104904.12 chr19:2269744:+ XPO1^ENSG00000082898.19 chr2:61533903:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2233:26030:13919 . YES_LDAS 0.0102 GT 1.7819 AG 1.9329 "[""INTERCHROMOSOMAL[chr19--chr2]""]" chr19:2269744-chr2:61533903 False 0 Read count too low: 1 < 5 FAIL 1
OAZ1--CBX8 1 0 1.0 0.0 ONLY_REF_SPLICE OAZ1^ENSG00000104904.12 chr19:2269744:+ CBX8^ENSG00000141570.11 chr17:79796540:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2274:29226:3844 . YES_LDAS 0.0102 GT 1.7819 AG 1.9086 "[""INTERCHROMOSOMAL[chr19--chr17]""]" chr19:2269744-chr17:79796540 False 0 Read count too low: 1 < 5 FAIL 1
OAS2--HERC5 1 0 1.0 0.0 INCL_NON_REF_SPLICE OAS2^ENSG00000111335.14 chr12:113011128:+ HERC5^ENSG00000138646.9 chr4:88469203:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2441:20554:3816 . YES_LDAS 0.0102 GT 1.7465 AG 1.7819 "[""INTERCHROMOSOMAL[chr12--chr4]""]" chr12:113011128-chr4:88469203 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
OAS1--WASHC3 1 0 1.0 0.0 ONLY_REF_SPLICE OAS1^ENSG00000089127.15 chr12:112911235:+ WASHC3^ENSG00000120860.11 chr12:102013192:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2190:27042:26937 . YES_LDAS 0.0102 GT 1.8892 AG 1.9086 "[""INTRACHROMOSOMAL[chr12:10.84Mb]""]" chr12:112911235-chr12:102013192 False 0 Read count too low: 1 < 5 FAIL 1
NUTM2A-AS1--EXOC4 1 0 0.5 0.0 ONLY_REF_SPLICE NUTM2A-AS1^ENSG00000223482.8 chr10:87288442:- EXOC4^ENSG00000131558.15 chr7:133630045:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1315:21929:3592 . YES_LDAS 0.0051 GT 1.5329 AG 1.9219 "[""INTERCHROMOSOMAL[chr10--chr7]""]" chr10:87288442-chr7:133630045 False 0 Read count too low: 1 < 5 FAIL 1
NUP98--CD80 1 0 1.0 0.0 INCL_NON_REF_SPLICE NUP98^ENSG00000110713.17 chr11:3753316:- CD80^ENSG00000121594.12 chr3:119557665:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1366:44298:10921 . NO_LDAS 0.0102 GT 1.9086 AG 1.5656 "[""INTERCHROMOSOMAL[chr11--chr3]""]" chr11:3753316-chr3:119557665 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NUP88--AC123512.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE NUP88^ENSG00000108559.12 chr17:5385448:- AC123512.1^ENSG00000286907.1 chr12:92021022:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2254:5158:16582 . NO_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTERCHROMOSOMAL[chr17--chr12]""]" chr17:5385448-chr12:92021022 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NUP42--LINC00174 1 0 1.0 0.0 ONLY_REF_SPLICE NUP42^ENSG00000136243.17 chr7:23182206:+ LINC00174^ENSG00000179406.8 chr7:66382427:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1155:46975:15222 . YES_LDAS 0.0102 GT 1.9329 AG 1.5058 "[""INTRACHROMOSOMAL[chr7:43.18Mb]""]" chr7:23182206-chr7:66382427 False 0 Read count too low: 1 < 5 FAIL 1
NUP35--AC007598.2 1 0 1.0 0.0 INCL_NON_REF_SPLICE NUP35^ENSG00000163002.13 chr2:183133623:+ AC007598.2^ENSG00000261394.1 chr16:12372537:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1462:35949:2009 . NO_LDAS 0.0102 GT 1.9656 AG 1.8256 "[""INTERCHROMOSOMAL[chr2--chr16]""]" chr2:183133623-chr16:12372537 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NUP214--EIF5 1 0 1.0 0.0 ONLY_REF_SPLICE NUP214^ENSG00000126883.17 chr9:131133209:+ EIF5^ENSG00000100664.11 chr14:103336677:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2464:51886:8090 . YES_LDAS 0.0102 GT 1.9656 AG 1.5656 "[""INTERCHROMOSOMAL[chr9--chr14]""]" chr9:131133209-chr14:103336677 False 0 Read count too low: 1 < 5 FAIL 1
NUP160--MOGAT1 1 0 1.0 0.0 INCL_NON_REF_SPLICE NUP160^ENSG00000030066.13 chr11:47847946:- MOGAT1^ENSG00000124003.13 chr2:222671756:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1155:14462:20365 . NO_LDAS 0.0102 GT 1.9329 AG 1.5219 "[""INTERCHROMOSOMAL[chr11--chr2]""]" chr11:47847946-chr2:222671756 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NUMB--PDCD4 1 0 1.0 0.0 ONLY_REF_SPLICE NUMB^ENSG00000133961.20 chr14:73287110:- PDCD4^ENSG00000150593.18 chr10:110881233:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2280:50559:27651 . YES_LDAS 0.0102 GT 1.6402 AG 1.7819 "[""INTERCHROMOSOMAL[chr14--chr10]""]" chr14:73287110-chr10:110881233 False 0 Read count too low: 1 < 5 FAIL 1
NUDT21--CSNK2A2 1 0 1.0 0.0 ONLY_REF_SPLICE NUDT21^ENSG00000167005.14 chr16:56446626:- CSNK2A2^ENSG00000070770.10 chr16:58186856:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2485:4414:4139 . YES_LDAS 0.0102 GT 1.9656 AG 1.6402 "[""INTRACHROMOSOMAL[chr16:1.71Mb]""]" chr16:56446626-chr16:58186856 False 0 Read count too low: 1 < 5 FAIL 1
NUDCD3--ITGB8 1 0 1.0 0.0 INCL_NON_REF_SPLICE NUDCD3^ENSG00000015676.18 chr7:44484968:- ITGB8^ENSG00000105855.10 chr7:20401834:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1235:50284:14452 . YES_LDAS 0.0102 GT 1.8062 AG 1.9656 "[""INTRACHROMOSOMAL[chr7:23.96Mb]""]" chr7:44484968-chr7:20401834 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NUDC--NKAIN3 1 0 1.0 0.0 INCL_NON_REF_SPLICE NUDC^ENSG00000090273.14 chr1:26941818:+ NKAIN3^ENSG00000185942.13 chr8:62970642:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2185:26572:20015 . YES_LDAS 0.0102 GT 1.8256 AG 1.2729 "[""INTERCHROMOSOMAL[chr1--chr8]""]" chr1:26941818-chr8:62970642 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NUCB1-AS1--VPS16 1 0 0.5 0.0 INCL_NON_REF_SPLICE NUCB1-AS1^ENSG00000235191.1 chr19:48913520:- VPS16^ENSG00000215305.10 chr20:2866645:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1343:20319:23644 . NO_LDAS 0.0051 GT 1.9329 AG 1.6895 "[""INTERCHROMOSOMAL[chr19--chr20]""]" chr19:48913520-chr20:2866645 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NT5DC3--KDM2B 1 0 1.0 0.0 ONLY_REF_SPLICE NT5DC3^ENSG00000111696.12 chr12:103814937:- KDM2B^ENSG00000089094.19 chr12:121534590:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1285:41652:29347 . YES_LDAS 0.0102 GT 1.8892 AG 1.9086 "[""INTRACHROMOSOMAL[chr12:17.59Mb]""]" chr12:103814937-chr12:121534590 False 0 Read count too low: 1 < 5 FAIL 1
NT5DC1--HDAC2 1 0 1.0 0.0 ONLY_REF_SPLICE NT5DC1^ENSG00000178425.14 chr6:116117945:+ HDAC2^ENSG00000196591.12 chr6:113960018:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2219:49160:18754 . YES_LDAS 0.0102 GT 1.8892 AG 1.5656 "[""INTRACHROMOSOMAL[chr6:2.09Mb]""]" chr6:116117945-chr6:113960018 False 0 Read count too low: 1 < 5 FAIL 1
NT5DC1--E2F7 1 0 1.0 0.0 ONLY_REF_SPLICE NT5DC1^ENSG00000178425.14 chr6:116223131:+ E2F7^ENSG00000165891.16 chr12:77050744:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1111:35391:1967 . NO_LDAS 0.0102 GT 1.8892 AG 1.5628 "[""INTERCHROMOSOMAL[chr6--chr12]""]" chr6:116223131-chr12:77050744 False 0 Read count too low: 1 < 5 FAIL 1
NT5C3A--KMO 1 0 1.0 0.0 ONLY_REF_SPLICE NT5C3A^ENSG00000122643.22 chr7:33035934:- KMO^ENSG00000117009.12 chr1:241555612:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1432:51538:2976 . YES_LDAS 0.0102 GT 1.8062 AG 1.5546 "[""INTERCHROMOSOMAL[chr7--chr1]""]" chr7:33035934-chr1:241555612 False 0 Read count too low: 1 < 5 FAIL 1
NT5C3A--CCZ1 1 0 0.5 0.0 ONLY_REF_SPLICE NT5C3A^ENSG00000122643.22 chr7:33017439:- CCZ1^ENSG00000122674.12 chr7:5902661:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2305:48893:24541 . YES_LDAS 0.0051 GT 1.7819 AG 1.7968 "[""INTRACHROMOSOMAL[chr7:27.09Mb]""]" chr7:33017439-chr7:5902661 False 0 Read count too low: 1 < 5 FAIL 1
NSUN5P1--UPF2 1 0 0.5 0.0 INCL_NON_REF_SPLICE NSUN5P1^ENSG00000223705.9 chr7:75410460:+ UPF2^ENSG00000151461.20 chr10:11927006:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1125:50349:28576 . YES_LDAS 0.0051 GT 1.8892 AG 1.7819 "[""INTERCHROMOSOMAL[chr7--chr10]""]" chr7:75410460-chr10:11927006 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NSUN5P1--PUM1 1 0 0.5 0.0 ONLY_REF_SPLICE NSUN5P1^ENSG00000223705.9 chr7:75410726:+ PUM1^ENSG00000134644.16 chr1:30967310:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1294:48424:4391 . YES_LDAS 0.0051 GT 1.7819 AG 1.7056 "[""INTERCHROMOSOMAL[chr7--chr1]""]" chr7:75410726-chr1:30967310 False 0 Read count too low: 1 < 5 FAIL 1
NRSN2--MORC4 1 0 1.0 0.0 INCL_NON_REF_SPLICE NRSN2^ENSG00000125841.13 chr20:349822:+ MORC4^ENSG00000133131.15 chrX:106999953:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1242:5272:27904 . NO_LDAS 0.0102 GT 1.6729 AG 0.971 "[""INTERCHROMOSOMAL[chr20--chrX]""]" chr20:349822-chrX:106999953 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NRL--DHRS4-AS1 1 0 1.0 0.0 ONLY_REF_SPLICE NRL^ENSG00000129535.13 chr14:24114722:- DHRS4-AS1^ENSG00000215256.4 chr14:23941158:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2208:27754:8300 . YES_LDAS 0.0102 GT 1.9329 AG 1.9899 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr14:0.03Mb]"",""NEIGHBORS[26107]""]" chr14:24114722-chr14:23941158 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
NR6A1--PSME3IP1 1 0 1.0 0.0 ONLY_REF_SPLICE NR6A1^ENSG00000148200.17 chr9:124733308:- PSME3IP1^ENSG00000172775.17 chr16:57173869:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1466:17601:23756 . YES_LDAS 0.0102 GT 1.9656 AG 1.5546 "[""INTERCHROMOSOMAL[chr9--chr16]""]" chr9:124733308-chr16:57173869 False 0 Read count too low: 1 < 5 FAIL 1
NR3C1--YTHDC2 1 0 1.0 0.0 ONLY_REF_SPLICE NR3C1^ENSG00000113580.15 chr5:143399656:- YTHDC2^ENSG00000047188.16 chr5:113581417:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1458:21541:22593 . YES_LDAS 0.0102 GT 1.9086 AG 1.8892 "[""INTRACHROMOSOMAL[chr5:29.68Mb]""]" chr5:143399656-chr5:113581417 False 0 Read count too low: 1 < 5 FAIL 1
NR3C1--HERPUD1 1 0 1.0 0.0 INCL_NON_REF_SPLICE NR3C1^ENSG00000113580.15 chr5:143314087:- HERPUD1^ENSG00000051108.15 chr16:56943218:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2286:43917:20827 . YES_LDAS 0.0102 GT 1.8295 AG 1.9899 "[""INTERCHROMOSOMAL[chr5--chr16]""]" chr5:143314087-chr16:56943218 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NR3C1--ARHGAP26 1 0 1.0 0.0 ONLY_REF_SPLICE NR3C1^ENSG00000113580.15 chr5:143399656:- ARHGAP26^ENSG00000145819.18 chr5:143207198:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1475:13758:22369 . YES_LDAS 0.0102 GT 1.9086 AG 1.6402 "[""Klijn_CellLines"",""INTRACHROMOSOMAL[chr5:0.05Mb]"",""LOCAL_INVERSION:-:+:[48920]""]" chr5:143399656-chr5:143207198 False 0 Read count too low: 1 < 5 FAIL 1
NR3C1--ARHGAP26 1 0 1.0 0.0 ONLY_REF_SPLICE NR3C1^ENSG00000113580.15 chr5:143399656:- ARHGAP26^ENSG00000145819.18 chr5:143056028:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2206:20448:13191 . NO_LDAS 0.0102 GT 1.9086 AG 1.9656 "[""Klijn_CellLines"",""INTRACHROMOSOMAL[chr5:0.05Mb]"",""LOCAL_INVERSION:-:+:[48920]""]" chr5:143399656-chr5:143056028 False 0 Read count too low: 1 < 5 FAIL 1
NR2F2-AS1--TOP2B 1 0 1.0 0.0 INCL_NON_REF_SPLICE NR2F2-AS1^ENSG00000247809.9 chr15:96125985:- TOP2B^ENSG00000077097.15 chr3:25638196:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1396:21217:26909 . NO_LDAS 0.0102 GT 1.9086 AG 1.7819 "[""INTERCHROMOSOMAL[chr15--chr3]""]" chr15:96125985-chr3:25638196 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NR1H2--ENSA 1 0 1.0 0.0 ONLY_REF_SPLICE NR1H2^ENSG00000131408.15 chr19:50338076:+ ENSA^ENSG00000143420.19 chr1:150625808:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1389:43812:28604 . YES_LDAS 0.0102 GT 1.9086 AG 1.8892 "[""INTERCHROMOSOMAL[chr19--chr1]""]" chr19:50338076-chr1:150625808 False 0 Read count too low: 1 < 5 FAIL 1
NPTN--PER2 1 0 1.0 0.0 ONLY_REF_SPLICE NPTN^ENSG00000156642.17 chr15:73633125:- PER2^ENSG00000132326.12 chr2:238277955:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1354:11015:10781 . NO_LDAS 0.0102 GT 1.7819 AG 1.8892 "[""INTERCHROMOSOMAL[chr15--chr2]""]" chr15:73633125-chr2:238277955 False 0 Read count too low: 1 < 5 FAIL 1
NPNT--SCARB1 1 0 1.0 0.0 ONLY_REF_SPLICE NPNT^ENSG00000168743.13 chr4:105898001:+ SCARB1^ENSG00000073060.17 chr12:124817707:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2308:11841:24513 . YES_LDAS 0.0102 GT 1.8295 AG 1.9329 "[""INTERCHROMOSOMAL[chr4--chr12]""]" chr4:105898001-chr12:124817707 False 0 Read count too low: 1 < 5 FAIL 1
NPIPB12--AP001020.2 1 0 0.2 0.0 INCL_NON_REF_SPLICE NPIPB12^ENSG00000169203.16 chr16:29499998:- AP001020.2^ENSG00000264635.1 chr18:738524:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1419:19154:25830 . YES_LDAS 0.002 GT 1.7465 AG 1.7968 "[""INTERCHROMOSOMAL[chr16--chr18]""]" chr16:29499998-chr18:738524 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NPAS1--ACBD4 1 0 1.0 0.0 INCL_NON_REF_SPLICE NPAS1^ENSG00000130751.10 chr19:47039564:+ ACBD4^ENSG00000181513.15 chr17:45142741:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1352:1129:3522 . YES_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chr19--chr17]""]" chr19:47039564-chr17:45142741 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NOTCH2NLC--ARHGAP12 1 0 0.33 0.0 ONLY_REF_SPLICE NOTCH2NLC^ENSG00000286219.1 chr1:149455577:+ ARHGAP12^ENSG00000165322.18 chr10:31831800:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2358:33983:29291 . NO_LDAS 0.0034 GT 1.9329 AG 1.6729 "[""INTERCHROMOSOMAL[chr1--chr10]""]" chr1:149455577-chr10:31831800 False 0 Read count too low: 1 < 5 FAIL 1
NOMO1--TTLL4 1 0 0.25 0.0 ONLY_REF_SPLICE NOMO1^ENSG00000103512.15 chr16:14878834:+ TTLL4^ENSG00000135912.11 chr2:218737579:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2307:6647:24485 . YES_LDAS 0.0026 GT 1.8256 AG 1.8892 "[""INTERCHROMOSOMAL[chr16--chr2]""]" chr16:14878834-chr2:218737579 False 0 Read count too low: 1 < 5 FAIL 1
NOMO1--ARHGAP45 1 0 0.33 0.0 INCL_NON_REF_SPLICE NOMO1^ENSG00000103512.15 chr16:14853493:+ ARHGAP45^ENSG00000180448.11 chr19:1079928:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1328:32721:24527 . YES_LDAS 0.0034 GT 1.9329 AG 1.8295 "[""INTERCHROMOSOMAL[chr16--chr19]""]" chr16:14853493-chr19:1079928 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NOL8--AC012213.2 1 0 1.0 0.0 INCL_NON_REF_SPLICE NOL8^ENSG00000198000.12 chr9:92310171:- AC012213.2^ENSG00000261670.1 chr8:103466830:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1446:31208:25157 . NO_LDAS 0.0102 GT 1.2729 AG 1.9329 "[""INTERCHROMOSOMAL[chr9--chr8]""]" chr9:92310171-chr8:103466830 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NOL7--ZC3H11A 1 0 1.0 0.0 ONLY_REF_SPLICE NOL7^ENSG00000225921.7 chr6:13620856:+ ZC3H11A^ENSG00000058673.17 chr1:203801575:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2156:2440:26222 . YES_LDAS 0.0102 GT 1.8323 AG 1.8892 "[""INTERCHROMOSOMAL[chr6--chr1]""]" chr6:13620856-chr1:203801575 False 0 Read count too low: 1 < 5 FAIL 1
NOL12--RACK1 1 0 1.0 0.0 ONLY_REF_SPLICE NOL12^ENSG00000273899.5 chr22:37688992:+ RACK1^ENSG00000204628.12 chr5:181238239:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1388:51190:23167 . YES_LDAS 0.0102 GT 1.8295 AG 1.8892 "[""INTERCHROMOSOMAL[chr22--chr5]""]" chr22:37688992-chr5:181238239 False 0 Read count too low: 1 < 5 FAIL 1
NOB1--WWP2 1 0 1.0 0.0 ONLY_REF_SPLICE NOB1^ENSG00000141101.13 chr16:69748918:- WWP2^ENSG00000198373.13 chr16:69939841:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2427:8176:18165 . YES_LDAS 0.0102 GT 1.9656 AG 1.9656 "[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_INVERSION:-:+:[7402]""]" chr16:69748918-chr16:69939841 False 0 Read count too low: 1 < 5 FAIL 1
NOB1--KCNIP1-AS1 1 0 1.0 0.0 INCL_NON_REF_SPLICE NOB1^ENSG00000141101.13 chr16:69748918:- KCNIP1-AS1^ENSG00000253591.2 chr5:170676573:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1181:16662:14144 . NO_LDAS 0.0102 GT 1.9656 AG 1.9656 "[""INTERCHROMOSOMAL[chr16--chr5]""]" chr16:69748918-chr5:170676573 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NNT--MTREX 1 0 1.0 0.0 ONLY_REF_SPLICE NNT^ENSG00000112992.18 chr5:43653213:+ MTREX^ENSG00000039123.16 chr5:55422878:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2321:51773:13275 . NO_LDAS 0.0102 GT 1.8323 AG 1.9656 "[""INTRACHROMOSOMAL[chr5:11.60Mb]""]" chr5:43653213-chr5:55422878 False 0 Read count too low: 1 < 5 FAIL 1
NMRK1--CDV3 1 0 1.0 0.0 ONLY_REF_SPLICE NMRK1^ENSG00000106733.21 chr9:75077159:- CDV3^ENSG00000091527.16 chr3:133586563:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1312:19631:24947 . YES_LDAS 0.0102 GT 1.8892 AG 1.8323 "[""INTERCHROMOSOMAL[chr9--chr3]""]" chr9:75077159-chr3:133586563 False 0 Read count too low: 1 < 5 FAIL 1
NME3--TMEM121B 1 0 0.5 0.0 INCL_NON_REF_SPLICE NME3^ENSG00000103024.7 chr16:1770918:- TMEM121B^ENSG00000183307.4 chr22:17120975:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1458:26160:15853 . NO_LDAS 0.0051 GC 1.1589 AG 1.4295 "[""INTERCHROMOSOMAL[chr16--chr22]""]" chr16:1770918-chr22:17120975 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NLRC5--SLC35F5 1 0 1.0 0.0 INCL_NON_REF_SPLICE NLRC5^ENSG00000140853.16 chr16:57034654:+ SLC35F5^ENSG00000115084.15 chr2:113755500:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1226:6436:23784 . NO_LDAS 0.0102 GT 1.9899 AG 1.7465 "[""INTERCHROMOSOMAL[chr16--chr2]""]" chr16:57034654-chr2:113755500 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NKX6-1--C6orf223 1 0 1.0 0.0 INCL_NON_REF_SPLICE NKX6-1^ENSG00000163623.10 chr4:84498077:- C6orf223^ENSG00000181577.16 chr6:44002762:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1430:40997:15489 . NO_LDAS 0.0102 GT 0.7219 AG 1.231 "[""INTERCHROMOSOMAL[chr4--chr6]""]" chr4:84498077-chr6:44002762 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NKTR--RAB30-DT 1 0 1.0 0.0 ONLY_REF_SPLICE NKTR^ENSG00000114857.18 chr3:42632823:+ RAB30-DT^ENSG00000246067.8 chr11:83073303:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2116:23563:8469 . YES_LDAS 0.0102 GT 1.6729 AG 1.9329 "[""INTERCHROMOSOMAL[chr3--chr11]""]" chr3:42632823-chr11:83073303 False 0 Read count too low: 1 < 5 FAIL 1
NKTR--PATJ 1 0 1.0 0.0 ONLY_REF_SPLICE NKTR^ENSG00000114857.18 chr3:42632823:+ PATJ^ENSG00000132849.21 chr1:62116532:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1371:5603:7684 . YES_LDAS 0.0102 GT 1.6729 AG 1.7056 "[""INTERCHROMOSOMAL[chr3--chr1]""]" chr3:42632823-chr1:62116532 False 0 Read count too low: 1 < 5 FAIL 1
NKTR--LAT2 1 0 1.0 0.0 ONLY_REF_SPLICE NKTR^ENSG00000114857.18 chr3:42632823:+ LAT2^ENSG00000086730.17 chr7:74223724:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1255:38610:25536 . YES_LDAS 0.0102 GT 1.6729 AG 1.9086 "[""INTERCHROMOSOMAL[chr3--chr7]""]" chr3:42632823-chr7:74223724 False 0 Read count too low: 1 < 5 FAIL 1
NKTR--EPS15 1 0 1.0 0.0 ONLY_REF_SPLICE NKTR^ENSG00000114857.18 chr3:42632823:+ EPS15^ENSG00000085832.17 chr1:51465326:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2494:27074:13037 . YES_LDAS 0.0102 GT 1.6729 AG 1.9656 "[""INTERCHROMOSOMAL[chr3--chr1]""]" chr3:42632823-chr1:51465326 False 0 Read count too low: 1 < 5 FAIL 1
NKIRAS2--SLC9A8 1 0 1.0 0.0 ONLY_REF_SPLICE NKIRAS2^ENSG00000168256.18 chr17:42021671:+ SLC9A8^ENSG00000197818.12 chr20:49849579:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2151:13806:26208 . YES_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chr17--chr20]""]" chr17:42021671-chr20:49849579 False 0 Read count too low: 1 < 5 FAIL 1
NIPBL--ANKRD17 1 0 1.0 0.0 ONLY_REF_SPLICE NIPBL^ENSG00000164190.19 chr5:36976402:+ ANKRD17^ENSG00000132466.19 chr4:73177533:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2158:11145:9716 . YES_LDAS 0.0102 GT 1.6729 AG 1.7968 "[""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""INTERCHROMOSOMAL[chr5--chr4]""]" chr5:36976402-chr4:73177533 False 0 Read count too low: 1 < 5 FAIL 1
NIN--GCC2 1 0 1.0 0.0 ONLY_REF_SPLICE NIN^ENSG00000100503.26 chr14:50766780:- GCC2^ENSG00000135968.21 chr2:108452399:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1365:27026:13233 . NO_LDAS 0.0102 GT 1.7819 AG 1.3383 "[""INTERCHROMOSOMAL[chr14--chr2]""]" chr14:50766780-chr2:108452399 False 0 Read count too low: 1 < 5 FAIL 1
NIF3L1--ORC2 1 0 1.0 0.0 ONLY_REF_SPLICE NIF3L1^ENSG00000196290.16 chr2:200889652:+ ORC2^ENSG00000115942.9 chr2:200921139:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2483:46191:12154 . YES_LDAS 0.0102 GT 1.7819 AG 1.7465 "[""INTRACHROMOSOMAL[chr2:0.01Mb]"",""LOCAL_INVERSION:+:-:[5039]""]" chr2:200889652-chr2:200921139 False 0 Read count too low: 1 < 5 FAIL 1
NFIC--CASTOR3 1 0 1.0 0.0 ONLY_REF_SPLICE NFIC^ENSG00000141905.19 chr19:3382243:+ CASTOR3^ENSG00000239521.9 chr7:100233674:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1220:51247:25928 . NO_LDAS 0.0102 GT 1.8295 AG 1.9656 "[""INTERCHROMOSOMAL[chr19--chr7]""]" chr19:3382243-chr7:100233674 False 0 Read count too low: 1 < 5 FAIL 1
NFE2L2--SPOPL 1 0 1.0 0.0 ONLY_REF_SPLICE NFE2L2^ENSG00000116044.16 chr2:177264532:- SPOPL^ENSG00000144228.9 chr2:138559022:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1213:21565:29529 . YES_LDAS 0.0102 GT 1.7232 AG 1.8892 "[""INTRACHROMOSOMAL[chr2:38.65Mb]""]" chr2:177264532-chr2:138559022 False 0 Read count too low: 1 < 5 FAIL 1
NFATC2--UTY 1 0 1.0 0.0 ONLY_REF_SPLICE NFATC2^ENSG00000101096.20 chr20:51454548:- UTY^ENSG00000183878.15 chrY:13369349:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1148:2116:22383 . NO_LDAS 0.0102 GT 1.8062 AG 1.9086 "[""INTERCHROMOSOMAL[chr20--chrY]""]" chr20:51454548-chrY:13369349 False 0 Read count too low: 1 < 5 FAIL 1
NFATC1--ZADH2 1 0 1.0 0.0 ONLY_REF_SPLICE NFATC1^ENSG00000131196.18 chr18:79486630:+ ZADH2^ENSG00000180011.7 chr18:75202340:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1192:18199:24288 . YES_LDAS 0.0102 GT 1.8892 AG 1.4566 "[""INTRACHROMOSOMAL[chr18:4.19Mb]""]" chr18:79486630-chr18:75202340 False 0 Read count too low: 1 < 5 FAIL 1
NFAT5--TLK1 1 0 1.0 0.0 INCL_NON_REF_SPLICE NFAT5^ENSG00000102908.22 chr16:69692299:+ TLK1^ENSG00000198586.14 chr2:170991622:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2323:40253:5652 . NO_LDAS 0.0102 GT 1.5656 AG 1.9656 "[""INTERCHROMOSOMAL[chr16--chr2]""]" chr16:69692299-chr2:170991622 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NEXMIF--RLIM 1 0 1.0 0.0 ONLY_REF_SPLICE NEXMIF^ENSG00000050030.16 chrX:74924883:- RLIM^ENSG00000131263.13 chrX:74596000:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1448:5013:13583 . NO_LDAS 0.0102 GT 1.8295 AG 1.7232 "[""INTRACHROMOSOMAL[chrX:0.12Mb]""]" chrX:74924883-chrX:74596000 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
NET1--GDI2 1 0 1.0 0.0 ONLY_REF_SPLICE NET1^ENSG00000173848.19 chr10:5412820:+ GDI2^ENSG00000057608.17 chr10:5800705:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1113:23992:17675 . YES_LDAS 0.0102 GT 1.5546 AG 1.9656 "[""INTRACHROMOSOMAL[chr10:0.31Mb]""]" chr10:5412820-chr10:5800705 False 0 Read count too low: 1 < 5 FAIL 1
NEMF--CDK16 1 0 1.0 0.0 INCL_NON_REF_SPLICE NEMF^ENSG00000165525.18 chr14:49852762:- CDK16^ENSG00000102225.16 chrX:47223694:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2478:18563:16876 . NO_LDAS 0.0102 GC 1.8892 AG 1.7465 "[""INTERCHROMOSOMAL[chr14--chrX]""]" chr14:49852762-chrX:47223694 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NEK4--HELLS 1 0 1.0 0.0 ONLY_REF_SPLICE NEK4^ENSG00000114904.13 chr3:52737586:- HELLS^ENSG00000119969.15 chr10:94554126:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1232:11509:5778 . YES_LDAS 0.0102 GT 1.5656 AG 1.8256 "[""INTERCHROMOSOMAL[chr3--chr10]""]" chr3:52737586-chr10:94554126 False 0 Read count too low: 1 < 5 FAIL 1
NEK4--AC110741.2 1 0 1.0 0.0 INCL_NON_REF_SPLICE NEK4^ENSG00000114904.13 chr3:52743443:- AC110741.2^ENSG00000271240.1 chr8:133963254:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2179:12585:11285 . NO_LDAS 0.0102 GT 1.9086 AG 1.7465 "[""INTERCHROMOSOMAL[chr3--chr8]""]" chr3:52743443-chr8:133963254 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NEDD9--NPIPB12 1 0 0.2 0.0 ONLY_REF_SPLICE NEDD9^ENSG00000111859.17 chr6:11382139:- NPIPB12^ENSG00000169203.16 chr16:29500274:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2211:26484:20701 . YES_LDAS 0.002 GT 1.8892 AG 1.7465 "[""INTERCHROMOSOMAL[chr6--chr16]""]" chr6:11382139-chr16:29500274 False 0 Read count too low: 1 < 5 FAIL 1
NDUFV1--HEXD 1 0 1.0 0.0 ONLY_REF_SPLICE NDUFV1^ENSG00000167792.13 chr11:67611207:+ HEXD^ENSG00000169660.17 chr17:82440997:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1327:43141:8104 . NO_LDAS 0.0102 GT 1.9329 AG 1.5656 "[""INTERCHROMOSOMAL[chr11--chr17]""]" chr11:67611207-chr17:82440997 False 0 Read count too low: 1 < 5 FAIL 1
NDUFS8--VARS2 1 0 1.0 0.0 ONLY_REF_SPLICE NDUFS8^ENSG00000110717.13 chr11:68033283:+ VARS2^ENSG00000137411.19 chr6:30919758:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1486:39978:20085 . YES_LDAS 0.0102 GT 1.7232 AG 1.9329 "[""INTERCHROMOSOMAL[chr11--chr6]""]" chr11:68033283-chr6:30919758 False 0 Read count too low: 1 < 5 FAIL 1
NDUFS8--SLC43A1 1 0 1.0 0.0 ONLY_REF_SPLICE NDUFS8^ENSG00000110717.13 chr11:68033283:+ SLC43A1^ENSG00000149150.9 chr11:57485242:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1301:47890:23616 . YES_LDAS 0.0102 GT 1.7232 AG 1.9329 "[""INTRACHROMOSOMAL[chr11:10.51Mb]""]" chr11:68033283-chr11:57485242 False 0 Read count too low: 1 < 5 FAIL 1
NDUFS8--PANK4 1 0 1.0 0.0 ONLY_REF_SPLICE NDUFS8^ENSG00000110717.13 chr11:68033283:+ PANK4^ENSG00000157881.16 chr1:2514466:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1337:15780:27693 . YES_LDAS 0.0102 GT 1.7232 AG 1.8892 "[""INTERCHROMOSOMAL[chr11--chr1]""]" chr11:68033283-chr1:2514466 False 0 Read count too low: 1 < 5 FAIL 1
NDUFS4--NNT 1 0 1.0 0.0 ONLY_REF_SPLICE NDUFS4^ENSG00000164258.12 chr5:53603530:+ NNT^ENSG00000112992.18 chr5:43675511:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1324:28587:20701 . YES_LDAS 0.0102 GT 1.5656 AG 1.9656 "[""INTRACHROMOSOMAL[chr5:9.85Mb]""]" chr5:53603530-chr5:43675511 False 0 Read count too low: 1 < 5 FAIL 1
NDUFB2--ACYP2 1 0 1.0 0.0 ONLY_REF_SPLICE NDUFB2^ENSG00000090266.13 chr7:140696842:+ ACYP2^ENSG00000170634.13 chr2:54050958:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1169:16387:27091 . YES_LDAS 0.0102 GT 1.8892 AG 1.9899 "[""INTERCHROMOSOMAL[chr7--chr2]""]" chr7:140696842-chr2:54050958 False 0 Read count too low: 1 < 5 FAIL 1
NDUFA4--PHF14 1 0 1.0 0.0 ONLY_REF_SPLICE NDUFA4^ENSG00000189043.10 chr7:10940016:- PHF14^ENSG00000106443.17 chr7:10982372:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2482:14090:19748 . YES_LDAS 0.0102 GT 1.8062 AG 1.8062 "[""GTEx_recurrent_StarF2019"",""DEEPEST2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr7:0.03Mb]"",""LOCAL_INVERSION:-:+:[33183]""]" chr7:10940016-chr7:10982372 False 0 Excluded annotation pattern: GTEx_recurrent_StarF2019 FAIL 1
NDUFA11--GFOD1 1 0 1.0 0.0 INCL_NON_REF_SPLICE NDUFA11^ENSG00000174886.14 chr19:5894674:- GFOD1^ENSG00000145990.11 chr6:13358030:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1213:13281:17170 . NO_LDAS 0.0102 GT 1.2729 AG 1.7465 "[""INTERCHROMOSOMAL[chr19--chr6]""]" chr19:5894674-chr6:13358030 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NDUFA10--AC244669.1 1 0 0.5 0.0 ONLY_REF_SPLICE NDUFA10^ENSG00000130414.13 chr2:239990074:- AC244669.1^ENSG00000223804.5 chr1:120267838:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1455:46749:24947 . YES_LDAS 0.0051 GT 1.9656 AG 1.8256 "[""INTERCHROMOSOMAL[chr2--chr1]""]" chr2:239990074-chr1:120267838 False 0 Read count too low: 1 < 5 FAIL 1
NDST2--SETD2 1 0 1.0 0.0 ONLY_REF_SPLICE NDST2^ENSG00000166507.19 chr10:73805587:- SETD2^ENSG00000181555.21 chr3:47037777:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1183:23159:11523 . YES_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chr10--chr3]""]" chr10:73805587-chr3:47037777 False 0 Read count too low: 1 < 5 FAIL 1
NDFIP1--SPG21 1 0 1.0 0.0 ONLY_REF_SPLICE NDFIP1^ENSG00000131507.11 chr5:142109037:+ SPG21^ENSG00000090487.11 chr15:64983593:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1398:44929:22635 . YES_LDAS 0.0102 GT 1.8256 AG 1.8062 "[""INTERCHROMOSOMAL[chr5--chr15]""]" chr5:142109037-chr15:64983593 False 0 Read count too low: 1 < 5 FAIL 1
NCOA4--TIMM23 1 0 1.0 0.0 ONLY_REF_SPLICE NCOA4^ENSG00000266412.6 chr10:46030526:- TIMM23^ENSG00000265354.4 chr10:46003203:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2334:49047:3676 . YES_LDAS 0.0102 GT 1.9086 AG 1.7968 "[""INTRACHROMOSOMAL[chr10:0.00Mb]"",""LOCAL_INVERSION:-:+:[1346]""]" chr10:46030526-chr10:46003203 False 0 Read count too low: 1 < 5 FAIL 1
NCOA4--AL161935.3 1 0 1.0 0.0 INCL_NON_REF_SPLICE NCOA4^ENSG00000266412.6 chr10:46010675:- AL161935.3^ENSG00000286694.1 chr10:31608792:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1418:16298:19174 . NO_LDAS 0.0102 GT 1.9899 AG 1.7819 "[""INTRACHROMOSOMAL[chr10:14.38Mb]""]" chr10:46010675-chr10:31608792 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NCLN--SEC16A 1 0 1.0 0.0 ONLY_REF_SPLICE NCLN^ENSG00000125912.11 chr19:3198897:+ SEC16A^ENSG00000148396.18 chr9:136461274:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2127:48658:25171 . YES_LDAS 0.0102 GT 1.8256 AG 1.8323 "[""INTERCHROMOSOMAL[chr19--chr9]""]" chr19:3198897-chr9:136461274 False 0 Read count too low: 1 < 5 FAIL 1
NCKAP1--DNAJC10 1 0 1.0 0.0 ONLY_REF_SPLICE NCKAP1^ENSG00000061676.15 chr2:183023806:- DNAJC10^ENSG00000077232.19 chr2:182775316:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1467:6881:1434 . YES_LDAS 0.0102 GT 1.5628 AG 1.6402 "[""INTRACHROMOSOMAL[chr2:0.11Mb]""]" chr2:183023806-chr2:182775316 False 0 Read count too low: 1 < 5 FAIL 1
NCF2--ATE1-AS1 1 0 1.0 0.0 INCL_NON_REF_SPLICE NCF2^ENSG00000116701.15 chr1:183573185:- ATE1-AS1^ENSG00000226864.2 chr10:121928382:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2120:9600:27301 . YES_LDAS 0.0102 GT 1.8062 AG 1.8323 "[""INTERCHROMOSOMAL[chr1--chr10]""]" chr1:183573185-chr10:121928382 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NCF1B--MSL2 1 0 0.5 0.0 ONLY_REF_SPLICE NCF1B^ENSG00000182487.12 chr7:73223956:+ MSL2^ENSG00000174579.4 chr3:136152738:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1207:31742:17647 . YES_LDAS 0.0051 GT 1.9329 AG 1.9656 "[""INTERCHROMOSOMAL[chr7--chr3]""]" chr7:73223956-chr3:136152738 False 0 Read count too low: 1 < 5 FAIL 1
NCALD--FBH1 1 0 1.0 0.0 ONLY_REF_SPLICE NCALD^ENSG00000104490.18 chr8:102020237:- FBH1^ENSG00000134452.20 chr10:5903020:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2472:2181:25886 . YES_LDAS 0.0102 GT 1.9656 AG 1.9329 "[""INTERCHROMOSOMAL[chr8--chr10]""]" chr8:102020237-chr10:5903020 False 0 Read count too low: 1 < 5 FAIL 1
NBPF26--EXOC4 1 0 0.5 0.0 ONLY_REF_SPLICE NBPF26^ENSG00000273136.7 chr1:120724250:+ EXOC4^ENSG00000131558.15 chr7:133630045:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2275:22681:11677 . YES_LDAS 0.0051 GT 1.5329 AG 1.9219 "[""INTERCHROMOSOMAL[chr1--chr7]""]" chr1:120724250-chr7:133630045 False 0 Read count too low: 1 < 5 FAIL 1
NBPF20--SMG1P1 1 0 0.25 0.0 ONLY_REF_SPLICE NBPF20^ENSG00000162825.16 chr1:145405098:- SMG1P1^ENSG00000237296.9 chr16:22459355:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2486:6736:15783 . YES_LDAS 0.0026 GT 1.5546 AG 1.9329 "[""INTERCHROMOSOMAL[chr1--chr16]""]" chr1:145405098-chr16:22459355 False 0 Read count too low: 1 < 5 FAIL 1
NBPF10--ARHGAP12 1 0 0.33 0.0 ONLY_REF_SPLICE NBPF10^ENSG00000271425.9 chr1:146164751:- ARHGAP12^ENSG00000165322.18 chr10:31831800:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2358:33983:29291 . NO_LDAS 0.0034 GT 1.9329 AG 1.6729 "[""INTERCHROMOSOMAL[chr1--chr10]""]" chr1:146164751-chr10:31831800 False 0 Read count too low: 1 < 5 FAIL 1
NBAS--SNX13 1 0 1.0 0.0 ONLY_REF_SPLICE NBAS^ENSG00000151779.13 chr2:15394227:- SNX13^ENSG00000071189.21 chr7:17816289:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2418:25844:15419 . YES_LDAS 0.0102 GT 1.8256 AG 1.8892 "[""INTERCHROMOSOMAL[chr2--chr7]""]" chr2:15394227-chr7:17816289 False 0 Read count too low: 1 < 5 FAIL 1
NAP1L1--UBE2D2 1 0 1.0 0.0 ONLY_REF_SPLICE NAP1L1^ENSG00000187109.15 chr12:76074203:- UBE2D2^ENSG00000131508.16 chr5:139600372:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2275:14753:1645 . NO_LDAS 0.0102 GT 1.8892 AG 1.8256 "[""INTERCHROMOSOMAL[chr12--chr5]""]" chr12:76074203-chr5:139600372 False 0 Read count too low: 1 < 5 FAIL 1
NAP1L1--LASP1 1 0 1.0 0.0 INCL_NON_REF_SPLICE NAP1L1^ENSG00000187109.15 chr12:76060270:- LASP1^ENSG00000002834.18 chr17:38920591:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2321:47097:8595 . NO_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTERCHROMOSOMAL[chr12--chr17]""]" chr12:76060270-chr17:38920591 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NANOS3--LPCAT1 1 0 1.0 0.0 ONLY_REF_SPLICE NANOS3^ENSG00000187556.7 chr19:13862194:+ LPCAT1^ENSG00000153395.10 chr5:1501603:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2139:25569:27217 . YES_LDAS 0.0102 GT 1.7465 AG 1.9656 "[""INTERCHROMOSOMAL[chr19--chr5]""]" chr19:13862194-chr5:1501603 False 0 Read count too low: 1 < 5 FAIL 1
NADSYN1--NCF1 1 0 1.0 0.0 INCL_NON_REF_SPLICE NADSYN1^ENSG00000172890.13 chr11:71484342:+ NCF1^ENSG00000158517.15 chr7:74788161:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1382:46984:6717 . YES_LDAS 0.0102 GT 1.8323 AG 1.7465 "[""INTERCHROMOSOMAL[chr11--chr7]""]" chr11:71484342-chr7:74788161 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NADSYN1--BCAR1 1 0 1.0 0.0 ONLY_REF_SPLICE NADSYN1^ENSG00000172890.13 chr11:71474526:+ BCAR1^ENSG00000050820.17 chr16:75243090:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2301:50608:3046 . YES_LDAS 0.0102 GT 1.9086 AG 1.9329 "[""INTERCHROMOSOMAL[chr11--chr16]""]" chr11:71474526-chr16:75243090 False 0 Read count too low: 1 < 5 FAIL 1
N4BP2L1--CHCHD7 1 0 1.0 0.0 INCL_NON_REF_SPLICE N4BP2L1^ENSG00000139597.18 chr13:32425282:- CHCHD7^ENSG00000170791.18 chr8:56214598:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2134:25149:3676 . NO_LDAS 0.0102 GT 1.5546 AG 1.8062 "[""INTERCHROMOSOMAL[chr13--chr8]""]" chr13:32425282-chr8:56214598 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MYOCOS--TMEM200A 1 0 1.0 0.0 ONLY_REF_SPLICE MYOCOS^ENSG00000283683.1 chr1:171604377:+ TMEM200A^ENSG00000164484.12 chr6:130440407:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1351:1437:6829 . YES_LDAS 0.0102 GT 1.9656 AG 1.7465 "[""INTERCHROMOSOMAL[chr1--chr6]""]" chr1:171604377-chr6:130440407 False 0 Read count too low: 1 < 5 FAIL 1
MYO9A--COMMD3 1 0 1.0 0.0 INCL_NON_REF_SPLICE MYO9A^ENSG00000066933.16 chr15:71848856:- COMMD3^ENSG00000148444.16 chr10:22319145:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1323:3144:11327 . NO_LDAS 0.0102 GT 1.8892 AG 1.5656 "[""INTERCHROMOSOMAL[chr15--chr10]""]" chr15:71848856-chr10:22319145 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MYO1E--HERC2 1 0 1.0 0.0 ONLY_REF_SPLICE MYO1E^ENSG00000157483.9 chr15:59153590:- HERC2^ENSG00000128731.18 chr15:28248736:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2286:18669:26278 . YES_LDAS 0.0102 GT 1.7465 AG 1.8256 "[""INTRACHROMOSOMAL[chr15:30.81Mb]""]" chr15:59153590-chr15:28248736 False 0 Read count too low: 1 < 5 FAIL 1
MYL6--ZNF804B 1 0 1.0 0.0 INCL_NON_REF_SPLICE MYL6^ENSG00000092841.19 chr12:56160153:+ ZNF804B^ENSG00000182348.7 chr7:89338518:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2385:22625:21500 . NO_LDAS 0.0102 GT 1.9656 AG 0.9183 "[""INTERCHROMOSOMAL[chr12--chr7]""]" chr12:56160153-chr7:89338518 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MYL6--PEG13 1 0 0.5 0.0 INCL_NON_REF_SPLICE MYL6^ENSG00000092841.19 chr12:56160015:+ PEG13^ENSG00000282164.3 chr8:140097355:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1309:45155:11874 . NO_LDAS 0.0051 AT 1.8892 AC 1.9086 "[""INTERCHROMOSOMAL[chr12--chr8]""]" chr12:56160015-chr8:140097355 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MYEF2--SNRPN 1 0 1.0 0.0 ONLY_REF_SPLICE MYEF2^ENSG00000104177.18 chr15:48178077:- SNRPN^ENSG00000128739.23 chr15:24962114:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1475:19728:18838 . YES_LDAS 0.0102 GT 1.8892 AG 1.9656 "[""INTRACHROMOSOMAL[chr15:23.16Mb]""]" chr15:48178077-chr15:24962114 False 0 Read count too low: 1 < 5 FAIL 1
MYCBP2-AS1--SLC7A6 1 0 1.0 0.0 ONLY_REF_SPLICE MYCBP2-AS1^ENSG00000236051.7 chr13:77092567:+ SLC7A6^ENSG00000103064.15 chr16:68294705:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1333:47048:26138 . NO_LDAS 0.0102 GT 1.9329 AG 1.4295 "[""GTEx_recurrent_StarF2019"",""INTERCHROMOSOMAL[chr13--chr16]""]" chr13:77092567-chr16:68294705 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
MYCBP--AC004687.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE MYCBP^ENSG00000214114.9 chr1:38873018:- AC004687.1^ENSG00000265206.5 chr17:58331483:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1196:23361:13443 . YES_LDAS 0.0102 GT 1.8256 AG 1.8256 "[""INTERCHROMOSOMAL[chr1--chr17]""]" chr1:38873018-chr17:58331483 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MYBL2--HSD17B6 1 0 0.5 0.0 INCL_NON_REF_SPLICE MYBL2^ENSG00000101057.16 chr20:43682886:+ HSD17B6^ENSG00000025423.11 chr12:56774057:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2280:2448:10458 . NO_LDAS 0.0051 GT 1.3383 AG 1.7465 "[""INTERCHROMOSOMAL[chr20--chr12]""]" chr20:43682886-chr12:56774057 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MUTYH--SPG7 1 0 1.0 0.0 ONLY_REF_SPLICE MUTYH^ENSG00000132781.19 chr1:45334391:- SPG7^ENSG00000197912.16 chr16:89532463:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2390:12536:27792 . YES_LDAS 0.0102 GT 1.8062 AG 1.3996 "[""INTERCHROMOSOMAL[chr1--chr16]""]" chr1:45334391-chr16:89532463 False 0 Read count too low: 1 < 5 FAIL 1
MTMR14--WDR43 1 0 1.0 0.0 ONLY_REF_SPLICE MTMR14^ENSG00000163719.20 chr3:9662375:+ WDR43^ENSG00000163811.12 chr2:28926468:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1338:21727:28464 . YES_LDAS 0.0102 GT 1.9656 AG 1.9329 "[""INTERCHROMOSOMAL[chr3--chr2]""]" chr3:9662375-chr2:28926468 False 0 Read count too low: 1 < 5 FAIL 1
MTERF4--ANKMY1 1 0 1.0 0.0 ONLY_REF_SPLICE MTERF4^ENSG00000122085.17 chr2:241089188:- ANKMY1^ENSG00000144504.15 chr2:240555055:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1223:32292:19524 . YES_LDAS 0.0102 GT 1.4566 AG 1.9656 "[""INTRACHROMOSOMAL[chr2:0.50Mb]""]" chr2:241089188-chr2:240555055 False 0 Read count too low: 1 < 5 FAIL 1
MTDH--LAPTM4B 1 0 1.0 0.0 ONLY_REF_SPLICE MTDH^ENSG00000147649.10 chr8:97644887:+ LAPTM4B^ENSG00000104341.17 chr8:97851397:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2141:45544:1701 . NO_LDAS 0.0102 GT 1.7819 AG 1.7465 "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr8:0.04Mb]"",""NEIGHBORS[44797]""]" chr8:97644887-chr8:97851397 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
MTDH--AC073487.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE MTDH^ENSG00000147649.10 chr8:97661173:+ AC073487.1^ENSG00000257509.1 chr12:55761955:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2129:49265:21066 . NO_LDAS 0.0102 GT 1.053 AG 1.8892 "[""INTERCHROMOSOMAL[chr8--chr12]""]" chr8:97661173-chr12:55761955 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MT-ND1--RN7SL752P 1 0 0.5 0.0 INCL_NON_REF_SPLICE MT-ND1^ENSG00000198888.2 chrM:3665:+ RN7SL752P^ENSG00000239437.3 chr3:129591470:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2269:30245:11131 . YES_LDAS 0.0051 GT 1.9899 AG 1.9086 "[""INTERCHROMOSOMAL[chrM--chr3]""]" chrM:3665-chr3:129591470 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MT-ND1--RN7SL665P 1 0 0.5 0.0 INCL_NON_REF_SPLICE MT-ND1^ENSG00000198888.2 chrM:3665:+ RN7SL665P^ENSG00000264169.2 chr9:130400387:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2269:30245:11131 . YES_LDAS 0.0051 GT 1.9899 AG 1.9086 "[""INTERCHROMOSOMAL[chrM--chr9]""]" chrM:3665-chr9:130400387 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MSH6--FBXO11 1 0 1.0 0.0 ONLY_REF_SPLICE MSH6^ENSG00000116062.17 chr2:47783493:+ FBXO11^ENSG00000138081.21 chr2:47839769:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1133:31346:5638 . YES_LDAS 0.0102 GT 1.7232 AG 1.9086 "[""ChimerSeq"",""INTRACHROMOSOMAL[chr2:0.02Mb]"",""NEIGHBORS_OVERLAP:+:-:[20747]""]" chr2:47783493-chr2:47839769 False 0 Read count too low: 1 < 5 FAIL 1
MSH6--CLEC4A 1 0 0.33 0.0 ONLY_REF_SPLICE MSH6^ENSG00000116062.17 chr2:47737506:+ CLEC4A^ENSG00000111729.15 chr12:8129264:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2359:22058:15839 . NO_LDAS 0.0034 GT 1.9329 AG 1.3996 "[""INTERCHROMOSOMAL[chr2--chr12]""]" chr2:47737506-chr12:8129264 False 0 Read count too low: 1 < 5 FAIL 1
MSH2--KEL 1 0 1.0 0.0 INCL_NON_REF_SPLICE MSH2^ENSG00000095002.15 chr2:47476524:+ KEL^ENSG00000197993.9 chr7:142962333:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1245:11703:28170 . NO_LDAS 0.0102 GT 1.7465 AG 1.8256 "[""INTERCHROMOSOMAL[chr2--chr7]""]" chr2:47476524-chr7:142962333 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MSC-AS1--DENND4A 1 0 1.0 0.0 ONLY_REF_SPLICE MSC-AS1^ENSG00000235531.11 chr8:72076627:+ DENND4A^ENSG00000174485.16 chr15:65756472:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1366:38570:18880 . YES_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTERCHROMOSOMAL[chr8--chr15]""]" chr8:72076627-chr15:65756472 False 0 Read count too low: 1 < 5 FAIL 1
MS4A1--LMO7 1 0 1.0 0.0 ONLY_REF_SPLICE MS4A1^ENSG00000156738.18 chr11:60464344:+ LMO7^ENSG00000136153.20 chr13:75853092:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1272:28943:29417 . NO_LDAS 0.0102 GC 1.9086 AG 1.9329 "[""INTERCHROMOSOMAL[chr11--chr13]""]" chr11:60464344-chr13:75853092 False 0 Read count too low: 1 < 5 FAIL 1
MRTFA--FNDC3B 1 0 1.0 0.0 INCL_NON_REF_SPLICE MRTFA^ENSG00000196588.20 chr22:40419220:- FNDC3B^ENSG00000075420.13 chr3:172251341:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2326:51417:26951 . NO_LDAS 0.0102 GT 1.7232 AG 1.8892 "[""INTERCHROMOSOMAL[chr22--chr3]""]" chr22:40419220-chr3:172251341 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MRPS6--SLC19A2 1 0 1.0 0.0 ONLY_REF_SPLICE MRPS6^ENSG00000243927.6 chr21:34073268:+ SLC19A2^ENSG00000117479.15 chr1:169477757:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2223:11193:3326 . YES_LDAS 0.0102 GT 1.9219 AG 1.8323 "[""INTERCHROMOSOMAL[chr21--chr1]""]" chr21:34073268-chr1:169477757 False 0 Read count too low: 1 < 5 FAIL 1
MRPS6--AP000317.1 1 0 1.0 0.0 ONLY_REF_SPLICE MRPS6^ENSG00000243927.6 chr21:34073745:+ AP000317.1^ENSG00000214955.5 chr21:34293681:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1177:36289:5316 . NO_LDAS 0.0102 GT 1.8256 AG 1.9329 "[""INTRACHROMOSOMAL[chr21:0.06Mb]"",""NEIGHBORS[62021]""]" chr21:34073745-chr21:34293681 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
MRPS27--LAMA5 1 0 1.0 0.0 INCL_NON_REF_SPLICE MRPS27^ENSG00000113048.17 chr5:72220886:- LAMA5^ENSG00000130702.15 chr20:62334653:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2166:24558:13639 . NO_LDAS 0.0102 GT 1.5546 AG 1.8295 "[""INTERCHROMOSOMAL[chr5--chr20]""]" chr5:72220886-chr20:62334653 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MRPS11--CARD8 1 0 1.0 0.0 ONLY_REF_SPLICE MRPS11^ENSG00000181991.16 chr15:88468024:+ CARD8^ENSG00000105483.18 chr19:48221855:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2145:46741:13947 . YES_LDAS 0.0102 GT 1.8323 AG 1.7819 "[""INTERCHROMOSOMAL[chr15--chr19]""]" chr15:88468024-chr19:48221855 False 0 Read count too low: 1 < 5 FAIL 1
MRPL52--YARS1 1 0 0.5 0.0 INCL_NON_REF_SPLICE MRPL52^ENSG00000172590.18 chr14:22830114:+ YARS1^ENSG00000134684.12 chr1:32786845:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2411:2707:17633 . NO_LDAS 0.0051 GT 1.9656 AG 1.7819 "[""INTERCHROMOSOMAL[chr14--chr1]""]" chr14:22830114-chr1:32786845 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MRPL52--MBD3 1 0 0.5 0.0 INCL_NON_REF_SPLICE MRPL52^ENSG00000172590.18 chr14:22830114:+ MBD3^ENSG00000071655.18 chr19:1592308:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2411:2707:17633 . NO_LDAS 0.0051 GT 1.9656 AG 1.7968 "[""INTERCHROMOSOMAL[chr14--chr19]""]" chr14:22830114-chr19:1592308 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MRPL49--SLC43A2 1 0 1.0 0.0 INCL_NON_REF_SPLICE MRPL49^ENSG00000149792.9 chr11:65125612:+ SLC43A2^ENSG00000167703.15 chr17:1585872:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1332:38481:10122 . NO_LDAS 0.0102 GT 1.7968 AG 1.7819 "[""INTERCHROMOSOMAL[chr11--chr17]""]" chr11:65125612-chr17:1585872 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MRPL17--ING2 1 0 0.25 0.0 INCL_NON_REF_SPLICE MRPL17^ENSG00000158042.9 chr11:6683075:- ING2^ENSG00000168556.7 chr4:183505253:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1422:1825:16414 . NO_LDAS 0.0026 GC 1.6402 AG 1.7056 "[""INTERCHROMOSOMAL[chr11--chr4]""]" chr11:6683075-chr4:183505253 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MREG--CEPT1 1 0 1.0 0.0 ONLY_REF_SPLICE MREG^ENSG00000118242.16 chr2:216013233:- CEPT1^ENSG00000134255.14 chr1:111147642:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2174:23523:10640 . YES_LDAS 0.0102 GT 1.8323 AG 1.7819 "[""INTERCHROMOSOMAL[chr2--chr1]""]" chr2:216013233-chr1:111147642 False 0 Read count too low: 1 < 5 FAIL 1
MPPE1--AC010343.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE MPPE1^ENSG00000154889.17 chr18:11886947:- AC010343.1^ENSG00000240376.1 chr5:33162166:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2475:3451:3620 . YES_LDAS 0.0102 GT 1.9656 AG 1.7819 "[""INTERCHROMOSOMAL[chr18--chr5]""]" chr18:11886947-chr5:33162166 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MPP6--MBNL1 1 0 1.0 0.0 ONLY_REF_SPLICE MPP6^ENSG00000105926.16 chr7:24668660:+ MBNL1^ENSG00000152601.17 chr3:152414941:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2360:43092:5414 . NO_LDAS 0.0102 GT 1.9899 AG 1.7819 "[""INTERCHROMOSOMAL[chr7--chr3]""]" chr7:24668660-chr3:152414941 False 0 Read count too low: 1 < 5 FAIL 1
MPP6--DMXL2 1 0 1.0 0.0 ONLY_REF_SPLICE MPP6^ENSG00000105926.16 chr7:24650712:+ DMXL2^ENSG00000104093.14 chr15:51547408:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1321:9406:26012 . YES_LDAS 0.0102 GT 1.8256 AG 1.6402 "[""INTERCHROMOSOMAL[chr7--chr15]""]" chr7:24650712-chr15:51547408 False 0 Read count too low: 1 < 5 FAIL 1
MOSPD2--PPIH 1 0 1.0 0.0 ONLY_REF_SPLICE MOSPD2^ENSG00000130150.12 chrX:14873758:+ PPIH^ENSG00000171960.12 chr1:42676584:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1121:23118:19580 . YES_LDAS 0.0102 GT 1.9329 AG 1.2867 "[""INTERCHROMOSOMAL[chrX--chr1]""]" chrX:14873758-chr1:42676584 False 0 Read count too low: 1 < 5 FAIL 1
MON2--SLC25A3 1 0 1.0 0.0 ONLY_REF_SPLICE MON2^ENSG00000061987.16 chr12:62467318:+ SLC25A3^ENSG00000075415.14 chr12:98597856:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2103:24332:6044 . NO_LDAS 0.0102 GT 1.9086 AG 1.8256 "[""INTRACHROMOSOMAL[chr12:35.99Mb]""]" chr12:62467318-chr12:98597856 False 0 Read count too low: 1 < 5 FAIL 1
MON1B--CAMSAP1 1 0 0.5 0.0 INCL_NON_REF_SPLICE MON1B^ENSG00000103111.15 chr16:77193684:+ CAMSAP1^ENSG00000130559.19 chr9:135821966:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2443:22317:16540 . NO_LDAS 0.0051 GT 1.9656 AG 1.8295 "[""INTERCHROMOSOMAL[chr16--chr9]""]" chr16:77193684-chr9:135821966 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MNX1--EHBP1 1 0 1.0 0.0 ONLY_REF_SPLICE MNX1^ENSG00000130675.15 chr7:157009660:- EHBP1^ENSG00000115504.15 chr2:62706897:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2238:10012:19440 . YES_LDAS 0.0102 GT 1.8892 AG 1.6402 "[""INTERCHROMOSOMAL[chr7--chr2]""]" chr7:157009660-chr2:62706897 False 0 Read count too low: 1 < 5 FAIL 1
MMP24OS--RPRD1B 1 0 1.0 0.0 ONLY_REF_SPLICE MMP24OS^ENSG00000126005.17 chr20:35272005:- RPRD1B^ENSG00000101413.12 chr20:38066081:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2470:14632:25704 . YES_LDAS 0.0102 GT 1.8892 AG 1.7819 "[""INTRACHROMOSOMAL[chr20:2.76Mb]""]" chr20:35272005-chr20:38066081 False 0 Read count too low: 1 < 5 FAIL 1
MLLT3--GLUD1P3 1 0 1.0 0.0 ONLY_REF_SPLICE MLLT3^ENSG00000171843.17 chr9:20365669:- GLUD1P3^ENSG00000250959.2 chr10:73737248:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1104:27009:23350 . YES_LDAS 0.0102 GT 1.5301 AG 1.5301 "[""INTERCHROMOSOMAL[chr9--chr10]""]" chr9:20365669-chr10:73737248 False 0 Read count too low: 1 < 5 FAIL 1
MLLT3--FOCAD 1 0 1.0 0.0 ONLY_REF_SPLICE MLLT3^ENSG00000171843.17 chr9:20448123:- FOCAD^ENSG00000188352.12 chr9:20907150:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1130:17673:13905 . YES_LDAS 0.0102 GT 1.6402 AG 1.8892 "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr9:0.04Mb]"",""LOCAL_INVERSION:-:+:[35810]""]" chr9:20448123-chr9:20907150 False 0 Read count too low: 1 < 5 FAIL 1
MLH1--AC005357.2 1 0 1.0 0.0 INCL_NON_REF_SPLICE MLH1^ENSG00000076242.16 chr3:36997270:+ AC005357.2^ENSG00000267623.3 chr19:27956453:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2407:33538:8146 . NO_LDAS 0.0102 GT 1.7465 AG 1.7232 "[""INTERCHROMOSOMAL[chr3--chr19]""]" chr3:36997270-chr19:27956453 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MLEC--ASS1P11 1 0 1.0 0.0 INCL_NON_REF_SPLICE MLEC^ENSG00000110917.8 chr12:120694958:+ ASS1P11^ENSG00000225308.2 chr7:21220745:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2491:1348:25732 . YES_LDAS 0.0102 GT 1.7232 AG 1.9656 "[""INTERCHROMOSOMAL[chr12--chr7]""]" chr12:120694958-chr7:21220745 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MKNK2--MAPK12 1 0 1.0 0.0 ONLY_REF_SPLICE MKNK2^ENSG00000099875.16 chr19:2041040:- MAPK12^ENSG00000188130.14 chr22:50253480:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1369:17617:22103 . YES_LDAS 0.0102 GT 1.7465 AG 1.9086 "[""INTERCHROMOSOMAL[chr19--chr22]""]" chr19:2041040-chr22:50253480 False 0 Read count too low: 1 < 5 FAIL 1
MKLN1--AC016831.6 1 0 1.0 0.0 ONLY_REF_SPLICE MKLN1^ENSG00000128585.18 chr7:131327997:+ AC016831.6^ENSG00000285106.2 chr7:131052555:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1422:22252:8132 . YES_LDAS 0.0102 GT 1.6729 AG 1.7968 "[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS_OVERLAP:+:-:[65]""]" chr7:131327997-chr7:131052555 False 0 Read count too low: 1 < 5 FAIL 1
MIR3681HG--NARS1 1 0 1.0 0.0 ONLY_REF_SPLICE MIR3681HG^ENSG00000224184.6 chr2:12007843:+ NARS1^ENSG00000134440.12 chr18:57601783:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1323:35407:13681 . YES_LDAS 0.0102 GT 1.8256 AG 1.7232 "[""INTERCHROMOSOMAL[chr2--chr18]""]" chr2:12007843-chr18:57601783 False 0 Read count too low: 1 < 5 FAIL 1
MIR34AHG--FBXO17 1 0 1.0 0.0 ONLY_REF_SPLICE MIR34AHG^ENSG00000228526.7 chr1:9182007:- FBXO17^ENSG00000269190.6 chr19:38950336:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1376:19647:22957 . NO_LDAS 0.0102 GT 1.7465 AG 1.9329 "[""INTERCHROMOSOMAL[chr1--chr19]""]" chr1:9182007-chr19:38950336 False 0 Read count too low: 1 < 5 FAIL 1
MIR3142HG--DYNC1H1 1 0 1.0 0.0 ONLY_REF_SPLICE MIR3142HG^ENSG00000253522.6 chr5:160468440:+ DYNC1H1^ENSG00000197102.13 chr14:102026574:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2270:46029:17983 . YES_LDAS 0.0102 GT 1.8892 AG 1.9329 "[""INTERCHROMOSOMAL[chr5--chr14]""]" chr5:160468440-chr14:102026574 False 0 Read count too low: 1 < 5 FAIL 1
MIR222HG--SP3 1 0 1.0 0.0 ONLY_REF_SPLICE MIR222HG^ENSG00000270069.1 chrX:45769786:- SP3^ENSG00000172845.17 chr2:173956232:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1167:8459:17619 . YES_LDAS 0.0102 GT 1.8892 AG 1.9086 "[""INTERCHROMOSOMAL[chrX--chr2]""]" chrX:45769786-chr2:173956232 False 0 Read count too low: 1 < 5 FAIL 1
MIR17HG--STK24 1 0 1.0 0.0 ONLY_REF_SPLICE MIR17HG^ENSG00000215417.13 chr13:91347959:+ STK24^ENSG00000102572.15 chr13:98519473:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1216:41523:27497 . YES_LDAS 0.0102 GT 1.7465 AG 1.7465 "[""INTRACHROMOSOMAL[chr13:7.09Mb]""]" chr13:91347959-chr13:98519473 False 0 Read count too low: 1 < 5 FAIL 1
MIR155HG--CNPPD1 1 0 1.0 0.0 ONLY_REF_SPLICE MIR155HG^ENSG00000234883.6 chr21:25569921:+ CNPPD1^ENSG00000115649.16 chr2:219176847:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1308:48399:26572 . NO_LDAS 0.0102 GT 1.9329 AG 1.4716 "[""INTERCHROMOSOMAL[chr21--chr2]""]" chr21:25569921-chr2:219176847 False 0 Read count too low: 1 < 5 FAIL 1
MICA--LIG1 1 0 0.33 0.0 ONLY_REF_SPLICE MICA^ENSG00000204520.14 chr6:31400763:+ LIG1^ENSG00000105486.14 chr19:48140143:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2178:3880:1897 . NO_LDAS 0.0034 GT 1.5656 AG 1.8295 "[""INTERCHROMOSOMAL[chr6--chr19]""]" chr6:31400763-chr19:48140143 False 0 Read count too low: 1 < 5 FAIL 1
MGST1--AC007529.2 1 0 1.0 0.0 ONLY_REF_SPLICE MGST1^ENSG00000008394.13 chr12:16383604:+ AC007529.2^ENSG00000283240.1 chr12:16661766:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1330:51829:28506 . YES_LDAS 0.0102 GT 1.9329 AG 1.6895 "[""BodyMap"",""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr12:0.05Mb]"",""NEIGHBORS[52507]""]" chr12:16383604-chr12:16661766 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
MGMT--RPS4Y1 1 0 1.0 0.0 ONLY_REF_SPLICE MGMT^ENSG00000170430.10 chr10:129536377:+ RPS4Y1^ENSG00000129824.16 chrY:2865088:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2150:17690:2583 . YES_LDAS 0.0102 GT 1.9656 AG 1.7819 "[""INTERCHROMOSOMAL[chr10--chrY]""]" chr10:129536377-chrY:2865088 False 0 Read count too low: 1 < 5 FAIL 1
MGAT1--DGKZ 1 0 1.0 0.0 ONLY_REF_SPLICE MGAT1^ENSG00000131446.17 chr5:180803602:- DGKZ^ENSG00000149091.15 chr11:46367291:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1104:33425:20449 . YES_LDAS 0.0102 GT 1.9086 AG 1.6895 "[""INTERCHROMOSOMAL[chr5--chr11]""]" chr5:180803602-chr11:46367291 False 0 Read count too low: 1 < 5 FAIL 1
MGA--LMF1 1 0 1.0 0.0 ONLY_REF_SPLICE MGA^ENSG00000174197.16 chr15:41660525:+ LMF1^ENSG00000103227.19 chr16:911079:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2419:37332:4657 . YES_LDAS 0.0102 GT 1.3383 AG 1.8892 "[""INTERCHROMOSOMAL[chr15--chr16]""]" chr15:41660525-chr16:911079 False 0 Read count too low: 1 < 5 FAIL 1
MFSD14B--NCBP1 1 0 0.5 0.0 ONLY_REF_SPLICE MFSD14B^ENSG00000148110.16 chr9:94438528:+ NCBP1^ENSG00000136937.13 chr9:97653798:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1358:49386:10935 . YES_LDAS 0.0051 GT 1.9329 AG 1.9086 "[""INTRACHROMOSOMAL[chr9:3.17Mb]""]" chr9:94438528-chr9:97653798 False 0 Read count too low: 1 < 5 FAIL 1
MFSD14A--SLC35A3 1 0 1.0 0.0 ONLY_REF_SPLICE MFSD14A^ENSG00000156875.14 chr1:100050004:+ SLC35A3^ENSG00000117620.15 chr1:100011365:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1480:39630:7460 . NO_LDAS 0.0102 GT 1.8892 AG 1.9086 "[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[2461]""]" chr1:100050004-chr1:100011365 False 0 Read count too low: 1 < 5 FAIL 1
METTL8--TLK1 1 0 1.0 0.0 ONLY_REF_SPLICE METTL8^ENSG00000123600.20 chr2:171392043:- TLK1^ENSG00000198586.14 chr2:171061156:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2179:19518:4545 . YES_LDAS 0.0102 GT 1.9219 AG 1.4566 "[""INTRACHROMOSOMAL[chr2:0.09Mb]"",""NEIGHBORS[86091]""]" chr2:171392043-chr2:171061156 False 0 Read count too low: 1 < 5 FAIL 1
METTL21A--CCNYL6 1 0 1.0 0.0 INCL_NON_REF_SPLICE METTL21A^ENSG00000144401.14 chr2:207621806:- CCNYL6^ENSG00000269845.1 chr19:21751064:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1362:14260:28590 . YES_LDAS 0.0102 GT 1.5656 AG 1.7465 "[""INTERCHROMOSOMAL[chr2--chr19]""]" chr2:207621806-chr19:21751064 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MELTF--SGSM2 1 0 0.33 0.0 INCL_NON_REF_SPLICE MELTF^ENSG00000163975.12 chr3:197008860:- SGSM2^ENSG00000141258.13 chr17:2364719:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1141:26848:9477 . NO_LDAS 0.0034 GT 1.585 AG 1.8256 "[""INTERCHROMOSOMAL[chr3--chr17]""]" chr3:197008860-chr17:2364719 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MELTF--MAPKBP1 1 0 1.0 0.0 ONLY_REF_SPLICE MELTF^ENSG00000163975.12 chr3:197026660:- MAPKBP1^ENSG00000137802.14 chr15:41824484:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1408:15983:18067 . YES_LDAS 0.0102 GT 1.8892 AG 1.7819 "[""INTERCHROMOSOMAL[chr3--chr15]""]" chr3:197026660-chr15:41824484 False 0 Read count too low: 1 < 5 FAIL 1
MELTF--CMIP 1 0 1.0 0.0 ONLY_REF_SPLICE MELTF^ENSG00000163975.12 chr3:197015365:- CMIP^ENSG00000153815.17 chr16:81703939:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2315:27705:28814 . YES_LDAS 0.0102 GT 1.8892 AG 1.9329 "[""INTERCHROMOSOMAL[chr3--chr16]""]" chr3:197015365-chr16:81703939 False 0 Read count too low: 1 < 5 FAIL 1
MEF2C--LINC02780 1 0 1.0 0.0 INCL_NON_REF_SPLICE MEF2C^ENSG00000081189.16 chr5:88761252:- LINC02780^ENSG00000284668.2 chr1:3998489:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1302:14753:1589 . NO_LDAS 0.0102 GT 1.9329 AG 1.8062 "[""INTERCHROMOSOMAL[chr5--chr1]""]" chr5:88761252-chr1:3998489 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MEF2A--STX17 1 0 1.0 0.0 ONLY_REF_SPLICE MEF2A^ENSG00000068305.17 chr15:99633173:+ STX17^ENSG00000136874.11 chr9:99951060:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1142:22956:20869 . NO_LDAS 0.0102 GT 1.5058 AG 1.7819 "[""INTERCHROMOSOMAL[chr15--chr9]""]" chr15:99633173-chr9:99951060 False 0 Read count too low: 1 < 5 FAIL 1
MED6--PCNX1 1 0 1.0 0.0 ONLY_REF_SPLICE MED6^ENSG00000133997.12 chr14:70584817:- PCNX1^ENSG00000100731.16 chr14:71045133:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2381:15740:14592 . YES_LDAS 0.0102 GT 1.9656 AG 1.8892 "[""INTRACHROMOSOMAL[chr14:0.31Mb]""]" chr14:70584817-chr14:71045133 False 0 Read count too low: 1 < 5 FAIL 1
MED23--DYNC2I1 1 0 1.0 0.0 ONLY_REF_SPLICE MED23^ENSG00000112282.18 chr6:131598287:- DYNC2I1^ENSG00000126870.16 chr7:158923571:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1479:11938:27707 . YES_LDAS 0.0102 GT 1.7968 AG 1.8256 "[""INTERCHROMOSOMAL[chr6--chr7]""]" chr6:131598287-chr7:158923571 False 0 Read count too low: 1 < 5 FAIL 1
MED10--FAM135A 1 0 1.0 0.0 INCL_NON_REF_SPLICE MED10^ENSG00000133398.4 chr5:6377166:- FAM135A^ENSG00000082269.17 chr6:70426698:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1216:31119:5582 . NO_LDAS 0.0102 GT 1.5301 AG 1.9899 "[""INTERCHROMOSOMAL[chr5--chr6]""]" chr5:6377166-chr6:70426698 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MECP2--PLEKHA7 1 0 1.0 0.0 INCL_NON_REF_SPLICE MECP2^ENSG00000169057.24 chrX:154032207:- PLEKHA7^ENSG00000166689.16 chr11:16791142:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1177:49224:5190 . NO_LDAS 0.0102 GT 1.7465 AG 1.3996 "[""INTERCHROMOSOMAL[chrX--chr11]""]" chrX:154032207-chr11:16791142 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MDN1--PMS1 1 0 1.0 0.0 ONLY_REF_SPLICE MDN1^ENSG00000112159.12 chr6:89751431:- PMS1^ENSG00000064933.18 chr2:189863743:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1174:17059:13681 . NO_LDAS 0.0102 GT 1.9086 AG 1.6895 "[""INTERCHROMOSOMAL[chr6--chr2]""]" chr6:89751431-chr2:189863743 False 0 Read count too low: 1 < 5 FAIL 1
MDN1--AC109583.2 1 0 1.0 0.0 INCL_NON_REF_SPLICE MDN1^ENSG00000112159.12 chr6:89648032:- AC109583.2^ENSG00000238013.1 chr3:46798268:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2349:3977:13359 . NO_LDAS 0.0102 GT 1.9656 AG 1.8062 "[""INTERCHROMOSOMAL[chr6--chr3]""]" chr6:89648032-chr3:46798268 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MDM2--VPS13B 1 0 1.0 0.0 ONLY_REF_SPLICE MDM2^ENSG00000135679.25 chr12:68809292:+ VPS13B^ENSG00000132549.19 chr8:99096312:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1193:25335:25241 . YES_LDAS 0.0102 GT 1.8062 AG 1.8892 "[""INTERCHROMOSOMAL[chr12--chr8]""]" chr12:68809292-chr8:99096312 False 0 Read count too low: 1 < 5 FAIL 1
MDM2--PRKAR1B-AS1 1 0 1.0 0.0 ONLY_REF_SPLICE MDM2^ENSG00000135679.25 chr12:68824651:+ PRKAR1B-AS1^ENSG00000237181.1 chr7:607865:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1267:15853:2653 . YES_LDAS 0.0102 GT 1.8892 AG 1.9656 "[""INTERCHROMOSOMAL[chr12--chr7]""]" chr12:68824651-chr7:607865 False 0 Read count too low: 1 < 5 FAIL 1
MDM2--MTAP 1 0 1.0 0.0 ONLY_REF_SPLICE MDM2^ENSG00000135679.25 chr12:68809292:+ MTAP^ENSG00000099810.21 chr9:21931008:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2269:17957:7754 . YES_LDAS 0.0102 GT 1.8062 AG 1.9656 "[""INTERCHROMOSOMAL[chr12--chr9]""]" chr12:68809292-chr9:21931008 False 0 Read count too low: 1 < 5 FAIL 1
MDM2--MDC1 1 0 1.0 0.0 ONLY_REF_SPLICE MDM2^ENSG00000135679.25 chr12:68820374:+ MDC1^ENSG00000137337.15 chr6:30715178:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2189:12633:24737 . YES_LDAS 0.0102 GT 1.9656 AG 1.9329 "[""INTERCHROMOSOMAL[chr12--chr6]""]" chr12:68820374-chr6:30715178 False 0 Read count too low: 1 < 5 FAIL 1
MCUB--SEC24B 1 0 1.0 0.0 ONLY_REF_SPLICE MCUB^ENSG00000005059.16 chr4:109560436:+ SEC24B^ENSG00000138802.11 chr4:109473004:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1190:50584:1715 . YES_LDAS 0.0102 GT 1.3753 AG 1.7232 "[""INTRACHROMOSOMAL[chr4:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[19313]""]" chr4:109560436-chr4:109473004 False 0 Read count too low: 1 < 5 FAIL 1
MCTP1--RCN1 1 0 1.0 0.0 ONLY_REF_SPLICE MCTP1^ENSG00000175471.19 chr5:94779110:- RCN1^ENSG00000049449.10 chr11:32097144:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1278:34444:25802 . NO_LDAS 0.0102 GT 1.6402 AG 1.8256 "[""INTERCHROMOSOMAL[chr5--chr11]""]" chr5:94779110-chr11:32097144 False 0 Read count too low: 1 < 5 FAIL 1
MCTP1--MBLAC2 1 0 1.0 0.0 ONLY_REF_SPLICE MCTP1^ENSG00000175471.19 chr5:95081426:- MBLAC2^ENSG00000176055.10 chr5:90461552:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2171:44953:5302 . YES_LDAS 0.0102 GT 1.3996 AG 1.9656 "[""INTRACHROMOSOMAL[chr5:4.23Mb]""]" chr5:95081426-chr5:90461552 False 0 Read count too low: 1 < 5 FAIL 1
MCOLN2--UBB 1 0 1.0 0.0 ONLY_REF_SPLICE MCOLN2^ENSG00000153898.13 chr1:84996796:- UBB^ENSG00000170315.14 chr17:16381902:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1482:23612:26628 . YES_LDAS 0.0102 GT 1.9899 AG 1.9219 "[""INTERCHROMOSOMAL[chr1--chr17]""]" chr1:84996796-chr17:16381902 False 0 Read count too low: 1 < 5 FAIL 1
MCOLN2--ACADM 1 0 1.0 0.0 ONLY_REF_SPLICE MCOLN2^ENSG00000153898.13 chr1:84947033:- ACADM^ENSG00000117054.15 chr1:75739980:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1279:34258:21864 . YES_LDAS 0.0102 GT 1.8323 AG 1.8892 "[""INTRACHROMOSOMAL[chr1:9.14Mb]""]" chr1:84947033-chr1:75739980 False 0 Read count too low: 1 < 5 FAIL 1
MCM9--NEU3 1 0 1.0 0.0 INCL_NON_REF_SPLICE MCM9^ENSG00000111877.18 chr6:118911650:- NEU3^ENSG00000162139.10 chr11:74988587:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2328:22107:8132 . YES_LDAS 0.0102 GT 1.9899 AG 1.9086 "[""INTERCHROMOSOMAL[chr6--chr11]""]" chr6:118911650-chr11:74988587 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MCCC1--STT3A 1 0 1.0 0.0 ONLY_REF_SPLICE MCCC1^ENSG00000078070.13 chr3:183099352:- STT3A^ENSG00000134910.14 chr11:125595881:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1405:1227:9071 . YES_LDAS 0.0102 GT 1.6895 AG 1.7819 "[""INTERCHROMOSOMAL[chr3--chr11]""]" chr3:183099352-chr11:125595881 False 0 Read count too low: 1 < 5 FAIL 1
MBP--NF1 1 0 1.0 0.0 ONLY_REF_SPLICE MBP^ENSG00000197971.16 chr18:77066298:- NF1^ENSG00000196712.18 chr17:31349120:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1204:51910:26236 . YES_LDAS 0.0102 GT 1.9656 AG 1.9899 "[""INTERCHROMOSOMAL[chr18--chr17]""]" chr18:77066298-chr17:31349120 False 0 Read count too low: 1 < 5 FAIL 1
MBD5--ORC4 1 0 1.0 0.0 ONLY_REF_SPLICE MBD5^ENSG00000204406.14 chr2:148054449:+ ORC4^ENSG00000115947.14 chr2:147975975:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1439:6809:23700 . YES_LDAS 0.0102 GT 1.4566 AG 1.4566 "[""INTRACHROMOSOMAL[chr2:0.00Mb]"",""NEIGHBORS_OVERLAP:+:-:[593]""]" chr2:148054449-chr2:147975975 False 0 Read count too low: 1 < 5 FAIL 1
MBD5--AC093390.2 1 0 1.0 0.0 INCL_NON_REF_SPLICE MBD5^ENSG00000204406.14 chr2:148468633:+ AC093390.2^ENSG00000284600.1 chr2:1811349:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2353:16169:24415 . NO_LDAS 0.0102 AT 1.9656 AC 1.8295 "[""INTRACHROMOSOMAL[chr2:146.21Mb]""]" chr2:148468633-chr2:1811349 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MB21D2--FGF12 1 0 1.0 0.0 ONLY_REF_SPLICE MB21D2^ENSG00000180611.7 chr3:192917630:- FGF12^ENSG00000114279.14 chr3:192727323:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1494:28118:21570 . NO_LDAS 0.0102 GT 1.7465 AG 1.6895 "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr3:0.03Mb]"",""NEIGHBORS[29051]""]" chr3:192917630-chr3:192727323 False 0 Read count too low: 1 < 5 FAIL 1
MATR3--RSRC1 1 0 1.0 0.0 ONLY_REF_SPLICE MATR3^ENSG00000015479.20 chr5:139293805:+ RSRC1^ENSG00000174891.13 chr3:158225657:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2345:32438:12434 . YES_LDAS 0.0102 GT 1.6895 AG 1.6729 "[""INTERCHROMOSOMAL[chr5--chr3]""]" chr5:139293805-chr3:158225657 False 0 Read count too low: 1 < 5 FAIL 1
MATR3--CORO7 1 0 1.0 0.0 ONLY_REF_SPLICE MATR3^ENSG00000280987.4 chr5:139276150:+ CORO7^ENSG00000262246.6 chr16:4365545:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2287:43481:23041 . YES_LDAS 0.0102 GT 1.9329 AG 1.5656 "[""INTERCHROMOSOMAL[chr5--chr16]""]" chr5:139276150-chr16:4365545 False 0 Read count too low: 1 < 5 FAIL 1
MATR3--CDC20 1 0 1.0 0.0 ONLY_REF_SPLICE MATR3^ENSG00000280987.4 chr5:139278408:+ CDC20^ENSG00000117399.14 chr1:43362951:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2482:21484:21486 . YES_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chr5--chr1]""]" chr5:139278408-chr1:43362951 False 0 Read count too low: 1 < 5 FAIL 1
MAT2A--CD53 1 0 1.0 0.0 ONLY_REF_SPLICE MAT2A^ENSG00000168906.13 chr2:85543034:+ CD53^ENSG00000143119.14 chr1:110897809:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1321:17754:24330 . YES_LDAS 0.0102 GT 1.8323 AG 1.9329 "[""INTERCHROMOSOMAL[chr2--chr1]""]" chr2:85543034-chr1:110897809 False 0 Read count too low: 1 < 5 FAIL 1
MAST4--RAB6C-AS1 1 0 1.0 0.0 ONLY_REF_SPLICE MAST4^ENSG00000069020.18 chr5:67136664:+ RAB6C-AS1^ENSG00000225449.3 chr2:129979091:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2391:5183:25171 . YES_LDAS 0.0102 GT 1.6895 AG 1.7819 "[""INTERCHROMOSOMAL[chr5--chr2]""]" chr5:67136664-chr2:129979091 False 0 Read count too low: 1 < 5 FAIL 1
MARS1--VPS13A 1 0 1.0 0.0 ONLY_REF_SPLICE MARS1^ENSG00000166986.15 chr12:57515991:+ VPS13A^ENSG00000197969.14 chr9:77403236:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1195:11315:18838 . YES_LDAS 0.0102 GT 1.7232 AG 1.7819 "[""INTERCHROMOSOMAL[chr12--chr9]""]" chr12:57515991-chr9:77403236 False 0 Read count too low: 1 < 5 FAIL 1
MARS1--MSH5 1 0 1.0 0.0 INCL_NON_REF_SPLICE MARS1^ENSG00000166986.15 chr12:57490379:+ MSH5^ENSG00000204410.16 chr6:31740596:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2215:23442:25101 . NO_LDAS 0.0102 GT 1.9329 AG 1.6729 "[""INTERCHROMOSOMAL[chr12--chr6]""]" chr12:57490379-chr6:31740596 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MARCHF6--ANKRD33B 1 0 1.0 0.0 ONLY_REF_SPLICE MARCHF6^ENSG00000145495.16 chr5:10353917:+ ANKRD33B^ENSG00000164236.12 chr5:10649266:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2405:4705:8595 . YES_LDAS 0.0102 GT 1.5656 AG 1.7968 "[""INTRACHROMOSOMAL[chr5:0.12Mb]""]" chr5:10353917-chr5:10649266 False 0 Read count too low: 1 < 5 FAIL 1
MAPKBP1--RNASEL 1 0 1.0 0.0 ONLY_REF_SPLICE MAPKBP1^ENSG00000137802.14 chr15:41775389:+ RNASEL^ENSG00000135828.11 chr1:182576389:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2498:45964:29333 . YES_LDAS 0.0102 GT 1.8892 AG 1.5058 "[""INTERCHROMOSOMAL[chr15--chr1]""]" chr15:41775389-chr1:182576389 False 0 Read count too low: 1 < 5 FAIL 1
MAPKAP1--HPS1 1 0 1.0 0.0 INCL_NON_REF_SPLICE MAPKAP1^ENSG00000119487.17 chr9:125559470:- HPS1^ENSG00000107521.20 chr10:98429639:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1128:5765:8917 . NO_LDAS 0.0102 GT 1.9899 AG 1.8892 "[""INTERCHROMOSOMAL[chr9--chr10]""]" chr9:125559470-chr10:98429639 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MAPK8IP3--PIGQ 1 0 1.0 0.0 ONLY_REF_SPLICE MAPK8IP3^ENSG00000138834.14 chr16:1729578:+ PIGQ^ENSG00000007541.17 chr16:574066:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2213:42372:27707 . YES_LDAS 0.0102 GT 1.5329 AG 1.7819 "[""INTRACHROMOSOMAL[chr16:1.12Mb]""]" chr16:1729578-chr16:574066 False 0 Read count too low: 1 < 5 FAIL 1
MAPK12--TONSL 1 0 1.0 0.0 ONLY_REF_SPLICE MAPK12^ENSG00000188130.14 chr22:50255197:- TONSL^ENSG00000160949.17 chr8:144432460:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2378:42105:8132 . YES_LDAS 0.0102 GT 1.7819 AG 1.9899 "[""INTERCHROMOSOMAL[chr22--chr8]""]" chr22:50255197-chr8:144432460 False 0 Read count too low: 1 < 5 FAIL 1
MAPK12--MAPK11 1 0 1.0 0.0 ONLY_REF_SPLICE MAPK12^ENSG00000188130.14 chr22:50256085:- MAPK11^ENSG00000185386.15 chr22:50266611:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2321:48610:20911 . YES_LDAS 0.0102 GT 1.8256 AG 1.9086 "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr22:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[1997]""]" chr22:50256085-chr22:50266611 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
MAPK1--PTBP3 1 0 1.0 0.0 ONLY_REF_SPLICE MAPK1^ENSG00000100030.15 chr22:21867322:- PTBP3^ENSG00000119314.16 chr9:112330474:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1135:48577:29627 . YES_LDAS 0.0102 GT 1.8892 AG 1.8295 "[""INTERCHROMOSOMAL[chr22--chr9]""]" chr22:21867322-chr9:112330474 False 0 Read count too low: 1 < 5 FAIL 1
MAP4K4--MINK1 1 0 1.0 0.0 ONLY_REF_SPLICE MAP4K4^ENSG00000071054.16 chr2:101834463:+ MINK1^ENSG00000141503.17 chr17:4886120:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1134:34808:8805 . YES_LDAS 0.0102 GT 1.8892 AG 1.9329 "[""INTERCHROMOSOMAL[chr2--chr17]""]" chr2:101834463-chr17:4886120 False 0 Read count too low: 1 < 5 FAIL 1
MAP2K4--ATF7IP 1 0 1.0 0.0 ONLY_REF_SPLICE MAP2K4^ENSG00000065559.15 chr17:12113360:+ ATF7IP^ENSG00000171681.12 chr12:14423909:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1488:13297:20337 . YES_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTERCHROMOSOMAL[chr17--chr12]""]" chr17:12113360-chr12:14423909 False 0 Read count too low: 1 < 5 FAIL 1
MAP2K3--SH3YL1 1 0 1.0 0.0 ONLY_REF_SPLICE MAP2K3^ENSG00000034152.19 chr17:21284969:+ SH3YL1^ENSG00000035115.22 chr2:253115:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1108:14122:7221 . YES_LDAS 0.0102 GT 1.8892 AG 1.8062 "[""INTERCHROMOSOMAL[chr17--chr2]""]" chr17:21284969-chr2:253115 False 0 Read count too low: 1 < 5 FAIL 1
MANEA--MRPS27 1 0 1.0 0.0 ONLY_REF_SPLICE MANEA^ENSG00000172469.16 chr6:95586983:+ MRPS27^ENSG00000113048.17 chr5:72297702:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2327:30407:6955 . YES_LDAS 0.0102 GT 1.9656 AG 1.7968 "[""INTERCHROMOSOMAL[chr6--chr5]""]" chr6:95586983-chr5:72297702 False 0 Read count too low: 1 < 5 FAIL 1
MAN2A1--SYNE1 1 0 1.0 0.0 ONLY_REF_SPLICE MAN2A1^ENSG00000112893.10 chr5:109690552:+ SYNE1^ENSG00000131018.24 chr6:152256765:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1126:6509:18641 . YES_LDAS 0.0102 GT 1.7465 AG 1.9899 "[""INTERCHROMOSOMAL[chr5--chr6]""]" chr5:109690552-chr6:152256765 False 0 Read count too low: 1 < 5 FAIL 1
MAN2A1--SEPTIN7P3 1 0 1.0 0.0 ONLY_REF_SPLICE MAN2A1^ENSG00000112893.10 chr5:109755456:+ SEPTIN7P3^ENSG00000226102.3 chr7:35972447:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2212:43820:3564 . NO_LDAS 0.0102 GT 1.4566 AG 1.7968 "[""INTERCHROMOSOMAL[chr5--chr7]""]" chr5:109755456-chr7:35972447 False 0 Read count too low: 1 < 5 FAIL 1
MAN2A1--FER 1 0 1.0 0.0 ONLY_REF_SPLICE MAN2A1^ENSG00000112893.10 chr5:109823837:+ FER^ENSG00000151422.13 chr5:108954729:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2382:39848:12294 . YES_LDAS 0.0102 GT 1.8892 AG 1.8295 "[""INTRACHROMOSOMAL[chr5:0.49Mb]""]" chr5:109823837-chr5:108954729 False 0 Read count too low: 1 < 5 FAIL 1
MAN1A2--CREM 1 0 1.0 0.0 ONLY_REF_SPLICE MAN1A2^ENSG00000198162.12 chr1:117442325:+ CREM^ENSG00000095794.19 chr10:35211656:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1378:8232:8735 . NO_LDAS 0.0102 GT 1.5656 AG 1.7819 "[""INTERCHROMOSOMAL[chr1--chr10]""]" chr1:117442325-chr10:35211656 False 0 Read count too low: 1 < 5 FAIL 1
MAN1A1--NPHP4 1 0 1.0 0.0 ONLY_REF_SPLICE MAN1A1^ENSG00000111885.7 chr6:119248260:- NPHP4^ENSG00000131697.18 chr1:5933329:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2261:31354:29249 . YES_LDAS 0.0102 GT 1.7465 AG 1.8892 "[""INTERCHROMOSOMAL[chr6--chr1]""]" chr6:119248260-chr1:5933329 False 0 Read count too low: 1 < 5 FAIL 1
MAML2--MTMR2 1 0 1.0 0.0 ONLY_REF_SPLICE MAML2^ENSG00000184384.14 chr11:96341383:- MTMR2^ENSG00000087053.20 chr11:95865676:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1187:13596:5386 . YES_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTRACHROMOSOMAL[chr11:0.05Mb]"",""NEIGHBORS[51283]""]" chr11:96341383-chr11:95865676 False 0 Read count too low: 1 < 5 FAIL 1
MAMDC4--ATRX 1 0 1.0 0.0 INCL_NON_REF_SPLICE MAMDC4^ENSG00000177943.14 chr9:136854263:+ ATRX^ENSG00000085224.23 chrX:77654190:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2358:29542:3859 . NO_LDAS 0.0102 GT 1.9329 AG 1.6895 "[""INTERCHROMOSOMAL[chr9--chrX]""]" chr9:136854263-chrX:77654190 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MALT1--DYM 1 0 1.0 0.0 ONLY_REF_SPLICE MALT1^ENSG00000172175.15 chr18:58700591:+ DYM^ENSG00000141627.14 chr18:49391645:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2467:35827:2499 . YES_LDAS 0.0102 GT 1.9329 AG 1.8256 "[""INTRACHROMOSOMAL[chr18:9.17Mb]""]" chr18:58700591-chr18:49391645 False 0 Read count too low: 1 < 5 FAIL 1
MAF1--TEP1 1 0 1.0 0.0 INCL_NON_REF_SPLICE MAF1^ENSG00000179632.10 chr8:144107514:+ TEP1^ENSG00000129566.13 chr14:20368813:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1489:45050:20267 . NO_LDAS 0.0102 GT 1.4295 AG 1.9656 "[""INTERCHROMOSOMAL[chr8--chr14]""]" chr8:144107514-chr14:20368813 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LZIC--SLC35E2A 1 0 0.5 0.0 ONLY_REF_SPLICE LZIC^ENSG00000162441.12 chr1:9942624:- SLC35E2A^ENSG00000215790.8 chr1:1739704:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1370:13273:11747 . NO_LDAS 0.0051 GT 1.7968 AG 1.7819 "[""INTRACHROMOSOMAL[chr1:8.18Mb]""]" chr1:9942624-chr1:1739704 False 0 Read count too low: 1 < 5 FAIL 1
LYRM4--FARS2 1 0 1.0 0.0 ONLY_REF_SPLICE LYRM4^ENSG00000214113.11 chr6:5260648:- FARS2^ENSG00000145982.13 chr6:5613169:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1278:27689:9085 . YES_LDAS 0.0102 GT 1.9086 AG 1.8256 "[""DEEPEST2019"",""TumorFusionsNAR2018"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr6:0.00Mb]"",""LOCAL_INVERSION:-:+:[94]""]" chr6:5260648-chr6:5613169 False 0 Read count too low: 1 < 5 FAIL 1
LYPLAL1--EZH2 1 0 1.0 0.0 ONLY_REF_SPLICE LYPLAL1^ENSG00000143353.12 chr1:219179246:+ EZH2^ENSG00000106462.11 chr7:148847305:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1139:45535:12728 . YES_LDAS 0.0102 GT 1.7968 AG 1.9219 "[""INTERCHROMOSOMAL[chr1--chr7]""]" chr1:219179246-chr7:148847305 False 0 Read count too low: 1 < 5 FAIL 1
LYPLAL1--BSN 1 0 1.0 0.0 INCL_NON_REF_SPLICE LYPLAL1^ENSG00000143353.12 chr1:219193221:+ BSN^ENSG00000164061.5 chr3:49657209:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1375:4285:1168 . NO_LDAS 0.0102 GT 1.2419 AG 1.9086 "[""INTERCHROMOSOMAL[chr1--chr3]""]" chr1:219193221-chr3:49657209 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LYPLAL1--ACBD6 1 0 1.0 0.0 ONLY_REF_SPLICE LYPLAL1^ENSG00000143353.12 chr1:219179246:+ ACBD6^ENSG00000230124.8 chr1:180413471:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2425:4778:18501 . YES_LDAS 0.0102 GT 1.7968 AG 1.1589 "[""INTRACHROMOSOMAL[chr1:38.67Mb]""]" chr1:219179246-chr1:180413471 False 0 Read count too low: 1 < 5 FAIL 1
LTB--EIF3B 1 0 1.0 0.0 INCL_NON_REF_SPLICE LTB^ENSG00000227507.3 chr6:31582313:- EIF3B^ENSG00000106263.18 chr7:2372134:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1181:21718:24667 . YES_LDAS 0.0102 GT 1.8256 AG 1.7968 "[""INTERCHROMOSOMAL[chr6--chr7]""]" chr6:31582313-chr7:2372134 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LSP1P5--RNF217 1 0 1.0 0.0 ONLY_REF_SPLICE LSP1P5^ENSG00000283196.2 chr2:89580558:- RNF217^ENSG00000146373.16 chr6:125045211:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1486:6550:17703 . YES_LDAS 0.0102 GT 1.7465 AG 1.9656 "[""INTERCHROMOSOMAL[chr2--chr6]""]" chr2:89580558-chr6:125045211 False 0 Read count too low: 1 < 5 FAIL 1
LSM14B--LAMA5 1 0 1.0 0.0 ONLY_REF_SPLICE LSM14B^ENSG00000149657.20 chr20:62122793:+ LAMA5^ENSG00000130702.15 chr20:62331129:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2416:38246:24989 . YES_LDAS 0.0102 GT 1.9086 AG 1.9086 "[""INTRACHROMOSOMAL[chr20:0.17Mb]""]" chr20:62122793-chr20:62331129 False 0 Read count too low: 1 < 5 FAIL 1
LRRK2--NKTR 1 0 1.0 0.0 ONLY_REF_SPLICE LRRK2^ENSG00000188906.17 chr12:40295644:+ NKTR^ENSG00000114857.18 chr3:42617570:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2236:7545:22509 . YES_LDAS 0.0102 GT 1.9219 AG 1.7968 "[""INTERCHROMOSOMAL[chr12--chr3]""]" chr12:40295644-chr3:42617570 False 0 Read count too low: 1 < 5 FAIL 1
LRRC61--POGZ 1 0 1.0 0.0 ONLY_REF_SPLICE LRRC61^ENSG00000127399.15 chr7:150326010:+ POGZ^ENSG00000143442.22 chr1:151442205:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2322:28765:28408 . YES_LDAS 0.0102 GT 1.8295 AG 1.8256 "[""INTERCHROMOSOMAL[chr7--chr1]""]" chr7:150326010-chr1:151442205 False 0 Read count too low: 1 < 5 FAIL 1
LRRC61--MMAB 1 0 1.0 0.0 ONLY_REF_SPLICE LRRC61^ENSG00000127399.15 chr7:150326010:+ MMAB^ENSG00000139428.12 chr12:109561852:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2336:28037:22971 . YES_LDAS 0.0102 GT 1.8295 AG 1.9899 "[""INTERCHROMOSOMAL[chr7--chr12]""]" chr7:150326010-chr12:109561852 False 0 Read count too low: 1 < 5 FAIL 1
LRRC59--TNPO1 1 0 0.2 0.0 INCL_NON_REF_SPLICE LRRC59^ENSG00000108829.10 chr17:50388060:- TNPO1^ENSG00000083312.18 chr5:72816893:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2350:32227:21346 . NO_LDAS 0.002 GT 1.7819 AG 1.3996 "[""INTERCHROMOSOMAL[chr17--chr5]""]" chr17:50388060-chr5:72816893 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LRRC59--NBEA 1 0 0.2 0.0 INCL_NON_REF_SPLICE LRRC59^ENSG00000108829.10 chr17:50388063:- NBEA^ENSG00000172915.19 chr13:34942513:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2350:32227:21346 . NO_LDAS 0.002 GT 1.8323 AG 1.4566 "[""INTERCHROMOSOMAL[chr17--chr13]""]" chr17:50388063-chr13:34942513 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LRRC59--AL355863.1 1 0 0.2 0.0 INCL_NON_REF_SPLICE LRRC59^ENSG00000108829.10 chr17:50388060:- AL355863.1^ENSG00000213247.3 chr10:111105001:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2350:32227:21346 . NO_LDAS 0.002 GT 1.7819 AG 1.6895 "[""INTERCHROMOSOMAL[chr17--chr10]""]" chr17:50388060-chr10:111105001 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LRRC59--AHDC1 1 0 0.2 0.0 INCL_NON_REF_SPLICE LRRC59^ENSG00000108829.10 chr17:50388060:- AHDC1^ENSG00000126705.15 chr1:27604142:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2350:32227:21346 . NO_LDAS 0.002 GT 1.7819 AG 1.3383 "[""INTERCHROMOSOMAL[chr17--chr1]""]" chr17:50388060-chr1:27604142 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LRRC59--AC016026.1 1 0 0.2 0.0 INCL_NON_REF_SPLICE LRRC59^ENSG00000108829.10 chr17:50388063:- AC016026.1^ENSG00000093100.13 chr22:17808907:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2350:32227:21346 . NO_LDAS 0.002 GT 1.8323 AG 1.371 "[""INTERCHROMOSOMAL[chr17--chr22]""]" chr17:50388063-chr22:17808907 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LMO7--KANSL1L 1 0 1.0 0.0 ONLY_REF_SPLICE LMO7^ENSG00000136153.20 chr13:75621868:+ KANSL1L^ENSG00000144445.17 chr2:210154611:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1480:43691:4601 . YES_LDAS 0.0102 GT 1.8295 AG 1.7465 "[""INTERCHROMOSOMAL[chr13--chr2]""]" chr13:75621868-chr2:210154611 False 0 Read count too low: 1 < 5 FAIL 1
LMO2--ZNF85 1 0 1.0 0.0 ONLY_REF_SPLICE LMO2^ENSG00000135363.12 chr11:33891795:- ZNF85^ENSG00000105750.15 chr19:20948744:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1194:7796:14592 . YES_LDAS 0.0102 GT 1.8892 AG 1.6049 "[""INTERCHROMOSOMAL[chr11--chr19]""]" chr11:33891795-chr19:20948744 False 0 Read count too low: 1 < 5 FAIL 1
LMBR1--HNRNPA2B1 1 0 1.0 0.0 ONLY_REF_SPLICE LMBR1^ENSG00000105983.22 chr7:156826605:- HNRNPA2B1^ENSG00000122566.22 chr7:26197732:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2379:21338:25437 . NO_LDAS 0.0102 GT 1.9086 AG 1.231 "[""INTRACHROMOSOMAL[chr7:130.47Mb]""]" chr7:156826605-chr7:26197732 False 0 Read count too low: 1 < 5 FAIL 1
LMAN1--MAPRE1 1 0 1.0 0.0 INCL_NON_REF_SPLICE LMAN1^ENSG00000074695.6 chr18:59359105:- MAPRE1^ENSG00000101367.9 chr20:32819973:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1365:40916:10753 . YES_LDAS 0.0102 GT 1.9656 AG 1.5656 "[""INTERCHROMOSOMAL[chr18--chr20]""]" chr18:59359105-chr20:32819973 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LIX1L--SEC62 1 0 1.0 0.0 ONLY_REF_SPLICE LIX1L^ENSG00000271601.4 chr1:145937604:- SEC62^ENSG00000008952.17 chr3:169985805:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1343:26362:21360 . YES_LDAS 0.0102 GT 1.9086 AG 1.7819 "[""INTERCHROMOSOMAL[chr1--chr3]""]" chr1:145937604-chr3:169985805 False 0 Read count too low: 1 < 5 FAIL 1
LINC02728--GAB2 1 0 1.0 0.0 ONLY_REF_SPLICE LINC02728^ENSG00000251323.3 chr11:78425337:- GAB2^ENSG00000033327.13 chr11:78280901:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2186:39808:21780 . YES_LDAS 0.0102 GT 1.8892 AG 1.8256 "[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[5634]""]" chr11:78425337-chr11:78280901 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
LINC02550--ARHGAP20 1 0 1.0 0.0 INCL_NON_REF_SPLICE LINC02550^ENSG00000271584.2 chr11:111171155:- ARHGAP20^ENSG00000137727.12 chr11:110738155:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1465:1607:21080 . YES_LDAS 0.0102 GT 1.8256 AG 1.6729 "[""INTRACHROMOSOMAL[chr11:0.38Mb]""]" chr11:111171155-chr11:110738155 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LINC02331--YLPM1 1 0 1.0 0.0 ONLY_REF_SPLICE LINC02331^ENSG00000235269.2 chr14:53750002:- YLPM1^ENSG00000119596.18 chr14:74829213:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2317:42947:10150 . YES_LDAS 0.0102 GT 1.6402 AG 1.9329 "[""INTRACHROMOSOMAL[chr14:20.91Mb]""]" chr14:53750002-chr14:74829213 False 0 Read count too low: 1 < 5 FAIL 1
LINC02151--ZWINT 1 0 1.0 0.0 INCL_NON_REF_SPLICE LINC02151^ENSG00000236437.1 chr11:116497510:- ZWINT^ENSG00000122952.17 chr10:56360383:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1101:50851:21038 . NO_LDAS 0.0102 GT 1.8892 AG 1.7465 "[""INTERCHROMOSOMAL[chr11--chr10]""]" chr11:116497510-chr10:56360383 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LINC01806--MRPS31 1 0 0.5 0.0 ONLY_REF_SPLICE LINC01806^ENSG00000227403.2 chr2:161244895:+ MRPS31^ENSG00000102738.8 chr13:40754092:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2238:51045:27035 . YES_LDAS 0.0051 GT 1.3996 AG 1.6402 "[""INTERCHROMOSOMAL[chr2--chr13]""]" chr2:161244895-chr13:40754092 False 0 Read count too low: 1 < 5 FAIL 1
LINC01588--CCDC9 1 0 1.0 0.0 ONLY_REF_SPLICE LINC01588^ENSG00000214900.11 chr14:50047467:- CCDC9^ENSG00000105321.14 chr19:47258330:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2359:29347:17506 . YES_LDAS 0.0102 GT 1.8062 AG 1.9656 "[""INTERCHROMOSOMAL[chr14--chr19]""]" chr14:50047467-chr19:47258330 False 0 Read count too low: 1 < 5 FAIL 1
LINC01567--AP002472.1 1 0 0.5 0.0 INCL_NON_REF_SPLICE LINC01567^ENSG00000224310.1 chr16:24662767:- AP002472.1^ENSG00000266373.1 chr18:3580229:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1172:27503:3859 . YES_LDAS 0.0051 GT 1.9086 AG 1.9219 "[""INTERCHROMOSOMAL[chr16--chr18]""]" chr16:24662767-chr18:3580229 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LINC01565--C1QBP 1 0 1.0 0.0 ONLY_REF_SPLICE LINC01565^ENSG00000198685.4 chr3:128575266:- C1QBP^ENSG00000108561.8 chr17:5434966:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2286:5854:16638 . YES_LDAS 0.0102 GT 1.9329 AG 1.9329 "[""INTERCHROMOSOMAL[chr3--chr17]""]" chr3:128575266-chr17:5434966 False 0 Read count too low: 1 < 5 FAIL 1
LINC01414--FP565260.3 1 0 0.5 0.0 INCL_NON_REF_SPLICE LINC01414^ENSG00000253554.7 chr8:64368914:- FP565260.3^ENSG00000277117.5 chr21:5036402:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1133:12779:9183 . NO_LDAS 0.0051 GT 1.6729 AG 1.7819 "[""INTERCHROMOSOMAL[chr8--chr21]""]" chr8:64368914-chr21:5036402 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LINC01409--SLIRP 1 0 0.5 0.0 ONLY_REF_SPLICE LINC01409^ENSG00000237491.10 chr1:779092:+ SLIRP^ENSG00000119705.10 chr14:77715772:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2146:3281:5036 . YES_LDAS 0.0051 GT 1.9329 AG 1.7819 "[""INTERCHROMOSOMAL[chr1--chr14]""]" chr1:779092-chr14:77715772 False 0 Read count too low: 1 < 5 FAIL 1
LINC01320--CLIC4 1 0 0.25 0.0 ONLY_REF_SPLICE LINC01320^ENSG00000228262.10 chr2:34677927:+ CLIC4^ENSG00000169504.15 chr1:24797742:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1354:10579:24961 . YES_LDAS 0.0026 GT 1.9656 AG 1.7968 "[""INTERCHROMOSOMAL[chr2--chr1]""]" chr2:34677927-chr1:24797742 False 0 Read count too low: 1 < 5 FAIL 1
LINC01252--ETV6 1 0 1.0 0.0 ONLY_REF_SPLICE LINC01252^ENSG00000247157.7 chr12:11559382:+ ETV6^ENSG00000139083.11 chr12:11752450:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1295:27657:20968 . YES_LDAS 0.0102 GT 1.8295 AG 1.9219 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr12:0.06Mb]"",""NEIGHBORS[59305]""]" chr12:11559382-chr12:11752450 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
LINC01128--CLEC4A 1 0 0.33 0.0 ONLY_REF_SPLICE LINC01128^ENSG00000228794.10 chr1:829104:+ CLEC4A^ENSG00000111729.15 chr12:8129264:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2359:22058:15839 . NO_LDAS 0.0034 GT 1.9329 AG 1.3996 "[""INTERCHROMOSOMAL[chr1--chr12]""]" chr1:829104-chr12:8129264 False 0 Read count too low: 1 < 5 FAIL 1
LINC00705--TASP1 1 0 1.0 0.0 ONLY_REF_SPLICE LINC00705^ENSG00000225269.3 chr10:4659348:+ TASP1^ENSG00000089123.16 chr20:13569586:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2270:43529:3788 . NO_LDAS 0.0102 GT 1.9329 AG 1.7465 "[""INTERCHROMOSOMAL[chr10--chr20]""]" chr10:4659348-chr20:13569586 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
LINC00683--PCNP 1 0 1.0 0.0 ONLY_REF_SPLICE LINC00683^ENSG00000266256.3 chr18:76530464:+ PCNP^ENSG00000081154.12 chr3:101585437:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1104:32697:10136 . YES_LDAS 0.0102 GT 1.585 AG 1.7232 "[""INTERCHROMOSOMAL[chr18--chr3]""]" chr18:76530464-chr3:101585437 False 0 Read count too low: 1 < 5 FAIL 1
LIN9--MELK 1 0 1.0 0.0 ONLY_REF_SPLICE LIN9^ENSG00000183814.16 chr1:226297719:- MELK^ENSG00000165304.8 chr9:36597222:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2449:10651:27862 . YES_LDAS 0.0102 GT 1.9086 AG 1.7465 "[""INTERCHROMOSOMAL[chr1--chr9]""]" chr1:226297719-chr9:36597222 False 0 Read count too low: 1 < 5 FAIL 1
LIMS2--SOCS3 1 0 0.5 0.0 INCL_NON_REF_SPLICE LIMS2^ENSG00000072163.20 chr2:127641128:- SOCS3^ENSG00000184557.4 chr17:78359011:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2220:23717:4587 . NO_LDAS 0.0051 GT 1.2729 AG 1.9329 "[""INTERCHROMOSOMAL[chr2--chr17]""]" chr2:127641128-chr17:78359011 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LIMS2--ITIH6 1 0 0.5 0.0 INCL_NON_REF_SPLICE LIMS2^ENSG00000072163.20 chr2:127641128:- ITIH6^ENSG00000102313.9 chrX:54790984:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2220:23717:4587 . NO_LDAS 0.0051 GT 1.2729 AG 1.9086 "[""INTERCHROMOSOMAL[chr2--chrX]""]" chr2:127641128-chrX:54790984 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LIMK2--ERGIC1 1 0 1.0 0.0 ONLY_REF_SPLICE LIMK2^ENSG00000182541.18 chr22:31275308:+ ERGIC1^ENSG00000113719.16 chr5:172897002:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2194:48545:7235 . YES_LDAS 0.0102 GT 1.7465 AG 1.7056 "[""INTERCHROMOSOMAL[chr22--chr5]""]" chr22:31275308-chr5:172897002 False 0 Read count too low: 1 < 5 FAIL 1
LIMK1--BUD23 1 0 1.0 0.0 ONLY_REF_SPLICE LIMK1^ENSG00000106683.15 chr7:74111998:+ BUD23^ENSG00000071462.12 chr7:73692596:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1225:2286:5918 . YES_LDAS 0.0102 GT 1.7819 AG 1.8323 "[""INTRACHROMOSOMAL[chr7:0.38Mb]""]" chr7:74111998-chr7:73692596 False 0 Read count too low: 1 < 5 FAIL 1
LEPROTL1--PCM1 1 0 1.0 0.0 ONLY_REF_SPLICE LEPROTL1^ENSG00000104660.19 chr8:30095528:+ PCM1^ENSG00000078674.18 chr8:17956604:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1107:42955:8202 . YES_LDAS 0.0102 GT 1.9086 AG 1.5301 "[""INTRACHROMOSOMAL[chr8:12.07Mb]""]" chr8:30095528-chr8:17956604 False 0 Read count too low: 1 < 5 FAIL 1
LDLRAD4--REL 1 0 1.0 0.0 ONLY_REF_SPLICE LDLRAD4^ENSG00000168675.19 chr18:13621271:+ REL^ENSG00000162924.15 chr2:60891683:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1103:6161:6745 . YES_LDAS 0.0102 GT 1.6895 AG 1.9899 "[""INTERCHROMOSOMAL[chr18--chr2]""]" chr18:13621271-chr2:60891683 False 0 Read count too low: 1 < 5 FAIL 1
LDLRAD4--FBXL5 1 0 1.0 0.0 ONLY_REF_SPLICE LDLRAD4^ENSG00000168675.19 chr18:13465111:+ FBXL5^ENSG00000118564.15 chr4:15644708:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2180:10562:11117 . YES_LDAS 0.0102 GT 1.9086 AG 1.5656 "[""INTERCHROMOSOMAL[chr18--chr4]""]" chr18:13465111-chr4:15644708 False 0 Read count too low: 1 < 5 FAIL 1
LDB1--UBE2L3 1 0 1.0 0.0 ONLY_REF_SPLICE LDB1^ENSG00000198728.11 chr10:102109029:- UBE2L3^ENSG00000185651.15 chr22:21610857:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1481:14656:19804 . YES_LDAS 0.0102 GT 1.9219 AG 1.7819 "[""INTERCHROMOSOMAL[chr10--chr22]""]" chr10:102109029-chr22:21610857 False 0 Read count too low: 1 < 5 FAIL 1
LDB1--FLJ40194 1 0 1.0 0.0 INCL_NON_REF_SPLICE LDB1^ENSG00000198728.11 chr10:102109029:- FLJ40194^ENSG00000177369.9 chr17:49290558:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1238:47081:10612 . NO_LDAS 0.0102 GT 1.9219 AG 1.3996 "[""INTERCHROMOSOMAL[chr10--chr17]""]" chr10:102109029-chr17:49290558 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LATS1--ATG5 1 0 1.0 0.0 ONLY_REF_SPLICE LATS1^ENSG00000131023.13 chr6:149717849:- ATG5^ENSG00000057663.16 chr6:106293106:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2384:4163:8553 . YES_LDAS 0.0102 GT 1.6402 AG 1.9656 "[""INTRACHROMOSOMAL[chr6:43.33Mb]""]" chr6:149717849-chr6:106293106 False 0 Read count too low: 1 < 5 FAIL 1
LARS1--NPM1P2 1 0 0.2 0.0 INCL_NON_REF_SPLICE LARS1^ENSG00000133706.19 chr5:146171910:- NPM1P2^ENSG00000266227.1 chr18:26205332:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1259:1558:6731 . NO_LDAS 0.002 GT 1.9329 AG 1.2867 "[""INTERCHROMOSOMAL[chr5--chr18]""]" chr5:146171910-chr18:26205332 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LARS1--HMGB3 1 0 0.2 0.0 INCL_NON_REF_SPLICE LARS1^ENSG00000133706.19 chr5:146171910:- HMGB3^ENSG00000029993.15 chrX:150987862:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1259:1558:6731 . NO_LDAS 0.002 GT 1.9329 AG 1.2867 "[""INTERCHROMOSOMAL[chr5--chrX]""]" chr5:146171910-chrX:150987862 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LARS1--CLEC2D 1 0 0.2 0.0 INCL_NON_REF_SPLICE LARS1^ENSG00000133706.19 chr5:146171910:- CLEC2D^ENSG00000069493.15 chr12:9695762:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1259:1558:6731 . NO_LDAS 0.002 GT 1.9329 AG 1.2867 "[""INTERCHROMOSOMAL[chr5--chr12]""]" chr5:146171910-chr12:9695762 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LARS1--AC025470.1 1 0 0.2 0.0 INCL_NON_REF_SPLICE LARS1^ENSG00000133706.19 chr5:146171910:- AC025470.1^ENSG00000248586.2 chr5:57319089:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1259:1558:6731 . NO_LDAS 0.002 GT 1.9329 AG 1.2867 "[""INTRACHROMOSOMAL[chr5:88.79Mb]""]" chr5:146171910-chr5:57319089 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LARP4--SCAF4 1 0 1.0 0.0 ONLY_REF_SPLICE LARP4^ENSG00000161813.22 chr12:50401028:+ SCAF4^ENSG00000156304.15 chr21:31693484:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1450:47202:19959 . YES_LDAS 0.0102 GT 1.6895 AG 1.7465 "[""INTERCHROMOSOMAL[chr12--chr21]""]" chr12:50401028-chr21:31693484 False 0 Read count too low: 1 < 5 FAIL 1
LARGE1--MYEF2 1 0 1.0 0.0 ONLY_REF_SPLICE LARGE1^ENSG00000133424.22 chr22:33650367:- MYEF2^ENSG00000104177.18 chr15:48159804:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1414:40730:6002 . NO_LDAS 0.0102 GT 1.6895 AG 1.9086 "[""INTERCHROMOSOMAL[chr22--chr15]""]" chr22:33650367-chr15:48159804 False 0 Read count too low: 1 < 5 FAIL 1
LARGE1--HULC 1 0 1.0 0.0 ONLY_REF_SPLICE LARGE1^ENSG00000133424.22 chr22:33381919:- HULC^ENSG00000285219.2 chr6:8959856:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2298:10554:9449 . YES_LDAS 0.0102 GT 1.9329 AG 1.7232 "[""INTERCHROMOSOMAL[chr22--chr6]""]" chr22:33381919-chr6:8959856 False 0 Read count too low: 1 < 5 FAIL 1
LANCL2--VOPP1 1 0 1.0 0.0 ONLY_REF_SPLICE LANCL2^ENSG00000132434.10 chr7:55412089:+ VOPP1^ENSG00000154978.13 chr7:55521130:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1115:29582:16063 . YES_LDAS 0.0102 GT 1.9086 AG 1.7465 "[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""LOCAL_INVERSION:+:-:[2319]""]" chr7:55412089-chr7:55521130 False 0 Read count too low: 1 < 5 FAIL 1
LAMP2--USP10 1 0 1.0 0.0 ONLY_REF_SPLICE LAMP2^ENSG00000005893.16 chrX:120441730:- USP10^ENSG00000103194.16 chr16:84758716:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1117:10481:27287 . YES_LDAS 0.0102 GT 1.8892 AG 1.8062 "[""INTERCHROMOSOMAL[chrX--chr16]""]" chrX:120441730-chr16:84758716 False 0 Read count too low: 1 < 5 FAIL 1
LAMA5--ZNF74 1 0 1.0 0.0 INCL_NON_REF_SPLICE LAMA5^ENSG00000130702.15 chr20:62337804:- ZNF74^ENSG00000185252.19 chr22:20406077:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1468:44079:21024 . NO_LDAS 0.0102 GT 1.7465 AG 1.9086 "[""INTERCHROMOSOMAL[chr20--chr22]""]" chr20:62337804-chr22:20406077 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LAMA5--ZBTB48 1 0 1.0 0.0 INCL_NON_REF_SPLICE LAMA5^ENSG00000130702.15 chr20:62366949:- ZBTB48^ENSG00000204859.13 chr1:6580676:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1301:41992:4965 . NO_LDAS 0.0102 GT 1.7819 AG 1.9086 "[""INTERCHROMOSOMAL[chr20--chr1]""]" chr20:62366949-chr1:6580676 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
LACTB--ZNF761 1 0 0.33 0.0 INCL_NON_REF_SPLICE LACTB^ENSG00000103642.12 chr15:63127472:+ ZNF761^ENSG00000160336.16 chr19:53456898:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2264:30124:1729 . NO_LDAS 0.0034 GT 1.4566 AG 1.6895 "[""INTERCHROMOSOMAL[chr15--chr19]""]" chr15:63127472-chr19:53456898 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LACTB--DHX15 1 0 0.33 0.0 INCL_NON_REF_SPLICE LACTB^ENSG00000103642.12 chr15:63127472:+ DHX15^ENSG00000109606.13 chr4:24541896:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2264:30124:1729 . NO_LDAS 0.0034 GT 1.4566 AG 1.5546 "[""INTERCHROMOSOMAL[chr15--chr4]""]" chr15:63127472-chr4:24541896 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LACTB--AL121878.1 1 0 0.33 0.0 INCL_NON_REF_SPLICE LACTB^ENSG00000103642.12 chr15:63127472:+ AL121878.1^ENSG00000238223.1 chrX:115064052:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2264:30124:1729 . NO_LDAS 0.0034 GT 1.4566 AG 1.6895 "[""INTERCHROMOSOMAL[chr15--chrX]""]" chr15:63127472-chrX:115064052 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
L2HGDH--ARHGAP21 1 0 1.0 0.0 ONLY_REF_SPLICE L2HGDH^ENSG00000087299.12 chr14:50312011:- ARHGAP21^ENSG00000107863.19 chr10:24635103:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2486:32923:9660 . YES_LDAS 0.0102 GT 1.5301 AG 1.2419 "[""INTERCHROMOSOMAL[chr14--chr10]""]" chr14:50312011-chr10:24635103 False 0 Read count too low: 1 < 5 FAIL 1
KRT17P8--CENPO 1 0 1.0 0.0 INCL_NON_REF_SPLICE KRT17P8^ENSG00000256937.1 chr12:9128014:+ CENPO^ENSG00000138092.11 chr2:24793929:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2382:23854:20043 . NO_LDAS 0.0102 GT 1.8892 AG 1.9656 "[""INTERCHROMOSOMAL[chr12--chr2]""]" chr12:9128014-chr2:24793929 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
KPNB1--ARL17A 1 0 0.5 0.0 ONLY_REF_SPLICE KPNB1^ENSG00000108424.11 chr17:47665158:+ ARL17A^ENSG00000185829.18 chr17:46570869:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1401:48852:8833 . YES_LDAS 0.0051 GT 1.6402 AG 1.7056 "[""INTRACHROMOSOMAL[chr17:1.07Mb]""]" chr17:47665158-chr17:46570869 False 0 Read count too low: 1 < 5 FAIL 1
KPNA6--RPS3A 1 0 0.33 0.0 INCL_NON_REF_SPLICE KPNA6^ENSG00000025800.14 chr1:32176041:+ RPS3A^ENSG00000145425.10 chr4:151104480:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1110:43731:10108 . YES_LDAS 0.0034 GT 1.7819 AG 1.9656 "[""INTERCHROMOSOMAL[chr1--chr4]""]" chr1:32176041-chr4:151104480 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
KPNA4--FNDC3B 1 0 1.0 0.0 ONLY_REF_SPLICE KPNA4^ENSG00000186432.10 chr3:160565214:- FNDC3B^ENSG00000075420.13 chr3:172112452:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1332:25310:16343 . NO_LDAS 0.0102 GT 1.7968 AG 1.7968 "[""INTRACHROMOSOMAL[chr3:11.47Mb]""]" chr3:160565214-chr3:172112452 False 0 Read count too low: 1 < 5 FAIL 1
KPNA2--OXCT1 1 0 1.0 0.0 ONLY_REF_SPLICE KPNA2^ENSG00000182481.10 chr17:68043363:+ OXCT1^ENSG00000083720.13 chr5:41739491:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1462:30836:5652 . YES_LDAS 0.0102 GT 1.9329 AG 1.5628 "[""INTERCHROMOSOMAL[chr17--chr5]""]" chr17:68043363-chr5:41739491 False 0 Read count too low: 1 < 5 FAIL 1
KNTC1--MPHOSPH9 1 0 1.0 0.0 ONLY_REF_SPLICE KNTC1^ENSG00000184445.12 chr12:122574380:+ MPHOSPH9^ENSG00000051825.15 chr12:123226351:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2150:10433:3074 . YES_LDAS 0.0102 GT 1.9899 AG 1.7819 "[""INTRACHROMOSOMAL[chr12:0.53Mb]""]" chr12:122574380-chr12:123226351 False 0 Read count too low: 1 < 5 FAIL 1
KMT5B--NDUFB2 1 0 1.0 0.0 ONLY_REF_SPLICE KMT5B^ENSG00000110066.15 chr11:68213138:- NDUFB2^ENSG00000090266.13 chr7:140702866:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2393:38716:3662 . YES_LDAS 0.0102 GT 1.1589 AG 1.3996 "[""INTERCHROMOSOMAL[chr11--chr7]""]" chr11:68213138-chr7:140702866 False 0 Read count too low: 1 < 5 FAIL 1
KMT5A--TNK2 1 0 1.0 0.0 ONLY_REF_SPLICE KMT5A^ENSG00000183955.13 chr12:123384208:+ TNK2^ENSG00000061938.20 chr3:195888606:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1266:45819:18627 . NO_LDAS 0.0102 GT 1.8892 AG 1.5546 "[""INTERCHROMOSOMAL[chr12--chr3]""]" chr12:123384208-chr3:195888606 False 0 Read count too low: 1 < 5 FAIL 1
KMT2C--AC002456.1 1 0 1.0 0.0 ONLY_REF_SPLICE KMT2C^ENSG00000055609.20 chr7:152309966:- AC002456.1^ENSG00000223969.6 chr7:90591901:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1361:3864:11453 . YES_LDAS 0.0102 GT 1.7819 AG 1.6402 "[""INTRACHROMOSOMAL[chr7:61.54Mb]""]" chr7:152309966-chr7:90591901 False 0 Read count too low: 1 < 5 FAIL 1
KMT2A--SNRNP40 1 0 1.0 0.0 INCL_NON_REF_SPLICE KMT2A^ENSG00000118058.23 chr11:118499507:+ SNRNP40^ENSG00000060688.13 chr1:31261080:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2391:1453:29697 . YES_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chr11--chr1]""]" chr11:118499507-chr1:31261080 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
KLHL33--AC009133.2 1 0 1.0 0.0 INCL_NON_REF_SPLICE KLHL33^ENSG00000185271.9 chr14:20430040:- AC009133.2^ENSG00000259952.1 chr16:29807702:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2357:38190:19454 . NO_LDAS 0.0102 GT 1.8892 AG 1.8256 "[""INTERCHROMOSOMAL[chr14--chr16]""]" chr14:20430040-chr16:29807702 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
KLHL29--CCT8 1 0 1.0 0.0 ONLY_REF_SPLICE KLHL29^ENSG00000119771.15 chr2:23562481:+ CCT8^ENSG00000156261.13 chr21:29070337:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1245:26516:29193 . YES_LDAS 0.0102 GT 1.8062 AG 1.8892 "[""INTERCHROMOSOMAL[chr2--chr21]""]" chr2:23562481-chr21:29070337 False 0 Read count too low: 1 < 5 FAIL 1
KLHL20--GDAP2 1 0 1.0 0.0 ONLY_REF_SPLICE KLHL20^ENSG00000076321.11 chr1:173751922:+ GDAP2^ENSG00000196505.11 chr1:117918736:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1231:26572:3116 . NO_LDAS 0.0102 GT 1.7465 AG 1.6895 "[""INTRACHROMOSOMAL[chr1:55.79Mb]""]" chr1:173751922-chr1:117918736 False 0 Read count too low: 1 < 5 FAIL 1
KLHL2--TMEM131L 1 0 1.0 0.0 ONLY_REF_SPLICE KLHL2^ENSG00000109466.14 chr4:165207902:+ TMEM131L^ENSG00000121210.16 chr4:153550073:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1256:38408:21794 . YES_LDAS 0.0102 GT 1.3383 AG 1.9329 "[""INTRACHROMOSOMAL[chr4:11.57Mb]""]" chr4:165207902-chr4:153550073 False 0 Read count too low: 1 < 5 FAIL 1
KLF6--ING1 1 0 1.0 0.0 ONLY_REF_SPLICE KLF6^ENSG00000067082.15 chr10:3784913:- ING1^ENSG00000153487.13 chr13:110719229:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1422:5336:12350 . YES_LDAS 0.0102 GT 1.9086 AG 1.9086 "[""INTERCHROMOSOMAL[chr10--chr13]""]" chr10:3784913-chr13:110719229 False 0 Read count too low: 1 < 5 FAIL 1
KLF12--LINC00393 1 0 1.0 0.0 ONLY_REF_SPLICE KLF12^ENSG00000118922.17 chr13:73715368:- LINC00393^ENSG00000224853.3 chr13:73546841:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1246:48626:1462 . YES_LDAS 0.0102 GT 1.7819 AG 1.9086 "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[24198]""]" chr13:73715368-chr13:73546841 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
KIN--NONO 1 0 1.0 0.0 INCL_NON_REF_SPLICE KIN^ENSG00000151657.12 chr10:7753722:- NONO^ENSG00000147140.17 chrX:71297836:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1228:35682:17605 . NO_LDAS 0.0102 GT 1.8323 AG 1.3996 "[""INTERCHROMOSOMAL[chr10--chrX]""]" chr10:7753722-chrX:71297836 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
KIF2C--RABEP2 1 0 1.0 0.0 INCL_NON_REF_SPLICE KIF2C^ENSG00000142945.13 chr1:44759348:+ RABEP2^ENSG00000177548.13 chr16:28936284:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2409:32098:27623 . NO_LDAS 0.0102 GT 1.6895 AG 1.8256 "[""INTERCHROMOSOMAL[chr1--chr16]""]" chr1:44759348-chr16:28936284 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
KIF21A--TMTC1 1 0 1.0 0.0 ONLY_REF_SPLICE KIF21A^ENSG00000139116.19 chr12:39442927:- TMTC1^ENSG00000133687.16 chr12:29604299:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1184:35852:1953 . NO_LDAS 0.0102 GT 1.6729 AG 1.7819 "[""INTRACHROMOSOMAL[chr12:9.51Mb]""]" chr12:39442927-chr12:29604299 False 0 Read count too low: 1 < 5 FAIL 1
KIF13A--DUSP14 1 0 1.0 0.0 ONLY_REF_SPLICE KIF13A^ENSG00000137177.20 chr6:17987054:- DUSP14^ENSG00000276023.5 chr17:37510677:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1362:19526:5484 . YES_LDAS 0.0102 GT 1.3996 AG 1.7232 "[""INTERCHROMOSOMAL[chr6--chr17]""]" chr6:17987054-chr17:37510677 False 0 Read count too low: 1 < 5 FAIL 1
KIAA1671--LUC7L3 1 0 1.0 0.0 INCL_NON_REF_SPLICE KIAA1671^ENSG00000197077.13 chr22:25041291:+ LUC7L3^ENSG00000108848.16 chr17:50719799:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1394:50495:13471 . NO_LDAS 0.0102 GT 1.5329 AG 1.8256 "[""INTERCHROMOSOMAL[chr22--chr17]""]" chr22:25041291-chr17:50719799 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
KIAA0825--FAM172A 1 0 1.0 0.0 ONLY_REF_SPLICE KIAA0825^ENSG00000185261.14 chr5:94384368:- FAM172A^ENSG00000113391.19 chr5:94074769:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1227:36159:18067 . YES_LDAS 0.0102 GT 1.8892 AG 1.9656 "[""ChimerSeq"",""INTRACHROMOSOMAL[chr5:0.04Mb]"",""NEIGHBORS[41267]""]" chr5:94384368-chr5:94074769 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
KIAA0232--ATP8A1 1 0 1.0 0.0 ONLY_REF_SPLICE KIAA0232^ENSG00000170871.12 chr4:6782841:+ ATP8A1^ENSG00000124406.16 chr4:42485668:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2286:13095:11355 . YES_LDAS 0.0102 GT 1.7056 AG 1.6895 "[""INTRACHROMOSOMAL[chr4:35.52Mb]""]" chr4:6782841-chr4:42485668 False 0 Read count too low: 1 < 5 FAIL 1
KIAA0100--LINC01235 1 0 1.0 0.0 INCL_NON_REF_SPLICE KIAA0100^ENSG00000007202.15 chr17:28618791:- LINC01235^ENSG00000270547.6 chr9:13407624:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2269:9737:28380 . NO_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTERCHROMOSOMAL[chr17--chr9]""]" chr17:28618791-chr9:13407624 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
KHDRBS1--SAFB 1 0 1.0 0.0 ONLY_REF_SPLICE KHDRBS1^ENSG00000121774.18 chr1:32014377:+ SAFB^ENSG00000160633.13 chr19:5641594:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2314:29113:23602 . YES_LDAS 0.0102 GT 1.8892 AG 1.5656 "[""INTERCHROMOSOMAL[chr1--chr19]""]" chr1:32014377-chr19:5641594 False 0 Read count too low: 1 < 5 FAIL 1
KDM6B--AL450405.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE KDM6B^ENSG00000132510.11 chr17:7849312:+ AL450405.1^ENSG00000230202.1 chr6:117999341:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2187:21039:16596 . NO_LDAS 0.0102 GT 1.5656 AG 1.5656 "[""INTERCHROMOSOMAL[chr17--chr6]""]" chr17:7849312-chr6:117999341 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
KDM4C--JAK2 1 0 1.0 0.0 ONLY_REF_SPLICE KDM4C^ENSG00000107077.19 chr9:6990524:+ JAK2^ENSG00000096968.14 chr9:5021963:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2398:26710:23672 . YES_LDAS 0.0102 GT 1.9086 AG 1.8892 "[""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""INTRACHROMOSOMAL[chr9:1.59Mb]""]" chr9:6990524-chr9:5021963 False 0 Read count too low: 1 < 5 FAIL 1
KDM4C--CCT2 1 0 1.0 0.0 ONLY_REF_SPLICE KDM4C^ENSG00000107077.19 chr9:7049200:+ CCT2^ENSG00000166226.13 chr12:69586753:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2273:20756:17002 . YES_LDAS 0.0102 GT 1.8062 AG 1.6049 "[""INTERCHROMOSOMAL[chr9--chr12]""]" chr9:7049200-chr12:69586753 False 0 Read count too low: 1 < 5 FAIL 1
KDM3B--HP1BP3 1 0 1.0 0.0 ONLY_REF_SPLICE KDM3B^ENSG00000120733.14 chr5:138393372:+ HP1BP3^ENSG00000127483.19 chr1:20773610:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2307:15780:28646 . YES_LDAS 0.0102 GT 1.9086 AG 1.8892 "[""INTERCHROMOSOMAL[chr5--chr1]""]" chr5:138393372-chr1:20773610 False 0 Read count too low: 1 < 5 FAIL 1
KDM2A--ZNF585B 1 0 1.0 0.0 ONLY_REF_SPLICE KDM2A^ENSG00000173120.15 chr11:67121358:+ ZNF585B^ENSG00000245680.11 chr19:37207254:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1127:17900:14045 . YES_LDAS 0.0102 GT 1.9656 AG 1.5058 "[""INTERCHROMOSOMAL[chr11--chr19]""]" chr11:67121358-chr19:37207254 False 0 Read count too low: 1 < 5 FAIL 1
KDM2A--TNFAIP3 1 0 1.0 0.0 ONLY_REF_SPLICE KDM2A^ENSG00000173120.15 chr11:67121358:+ TNFAIP3^ENSG00000118503.15 chr6:137871213:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1276:8232:23560 . NO_LDAS 0.0102 GT 1.9656 AG 1.8892 "[""INTERCHROMOSOMAL[chr11--chr6]""]" chr11:67121358-chr6:137871213 False 0 Read count too low: 1 < 5 FAIL 1
KDM2A--TMEM126B 1 0 1.0 0.0 ONLY_REF_SPLICE KDM2A^ENSG00000173120.15 chr11:67121358:+ TMEM126B^ENSG00000171204.13 chr11:85631145:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1102:42469:3634 . YES_LDAS 0.0102 GT 1.9656 AG 1.7232 "[""INTRACHROMOSOMAL[chr11:18.37Mb]""]" chr11:67121358-chr11:85631145 False 0 Read count too low: 1 < 5 FAIL 1
KDM2A--ATM 1 0 1.0 0.0 ONLY_REF_SPLICE KDM2A^ENSG00000173120.15 chr11:67207688:+ ATM^ENSG00000149311.19 chr11:108227595:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2102:35067:27329 . YES_LDAS 0.0102 GT 1.7465 AG 1.7819 "[""INTRACHROMOSOMAL[chr11:40.96Mb]""]" chr11:67207688-chr11:108227595 False 0 Read count too low: 1 < 5 FAIL 1
KDM1A--ENPP1 1 0 1.0 0.0 INCL_NON_REF_SPLICE KDM1A^ENSG00000004487.17 chr1:23059167:+ ENPP1^ENSG00000197594.13 chr6:131864555:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1224:37834:3929 . NO_LDAS 0.0102 GT 1.8256 AG 1.8892 "[""INTERCHROMOSOMAL[chr1--chr6]""]" chr1:23059167-chr6:131864555 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
KCNQ5--PRIM2 1 0 1.0 0.0 ONLY_REF_SPLICE KCNQ5^ENSG00000185760.17 chr6:73111403:+ PRIM2^ENSG00000146143.19 chr6:57537440:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2380:13912:26166 . YES_LDAS 0.0102 GT 1.8892 AG 1.5656 "[""INTRACHROMOSOMAL[chr6:14.97Mb]""]" chr6:73111403-chr6:57537440 False 0 Read count too low: 1 < 5 FAIL 1
KCNN4--PPP4R1 1 0 1.0 0.0 INCL_NON_REF_SPLICE KCNN4^ENSG00000104783.14 chr19:43766435:- PPP4R1^ENSG00000154845.16 chr18:9593874:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2156:23159:21668 . YES_LDAS 0.0102 GT 1.8892 AG 1.9329 "[""INTERCHROMOSOMAL[chr19--chr18]""]" chr19:43766435-chr18:9593874 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
KCNN3--MNAT1 1 0 1.0 0.0 ONLY_REF_SPLICE KCNN3^ENSG00000143603.19 chr1:154771975:- MNAT1^ENSG00000020426.11 chr14:60811987:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1468:24437:15110 . YES_LDAS 0.0102 GT 1.9656 AG 1.7465 "[""INTERCHROMOSOMAL[chr1--chr14]""]" chr1:154771975-chr14:60811987 False 0 Read count too low: 1 < 5 FAIL 1
KCNH5--MAML3 1 0 0.17 0.0 INCL_NON_REF_SPLICE KCNH5^ENSG00000140015.20 chr14:62950140:- MAML3^ENSG00000196782.12 chr4:139889956:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1210:8580:14914 . NO_LDAS 0.0017 GT 1.7819 AG 1.585 "[""INTERCHROMOSOMAL[chr14--chr4]""]" chr14:62950140-chr4:139889956 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
KCNH5--MAML2 1 0 0.17 0.0 INCL_NON_REF_SPLICE KCNH5^ENSG00000140015.20 chr14:62950140:- MAML2^ENSG00000184384.14 chr11:96092257:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1210:8580:14914 . NO_LDAS 0.0017 GT 1.7819 AG 1.5656 "[""INTERCHROMOSOMAL[chr14--chr11]""]" chr14:62950140-chr11:96092257 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
KCNH5--HTT 1 0 0.17 0.0 INCL_NON_REF_SPLICE KCNH5^ENSG00000140015.20 chr14:62950140:- HTT^ENSG00000197386.13 chr4:3074889:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1210:8580:14914 . NO_LDAS 0.0017 GT 1.7819 AG 1.585 "[""INTERCHROMOSOMAL[chr14--chr4]""]" chr14:62950140-chr4:3074889 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
KCND2--PGBD2 1 0 1.0 0.0 ONLY_REF_SPLICE KCND2^ENSG00000184408.10 chr7:120275747:+ PGBD2^ENSG00000185220.12 chr1:248917279:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1280:27988:19216 . YES_LDAS 0.0102 GT 1.8892 AG 1.8295 "[""INTERCHROMOSOMAL[chr7--chr1]""]" chr7:120275747-chr1:248917279 False 0 Read count too low: 1 < 5 FAIL 1
KCMF1--APOLD1 1 0 1.0 0.0 ONLY_REF_SPLICE KCMF1^ENSG00000176407.18 chr2:84971467:+ APOLD1^ENSG00000178878.13 chr12:12823870:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2257:8952:3396 . YES_LDAS 0.0102 GT 1.9899 AG 1.9656 "[""INTERCHROMOSOMAL[chr2--chr12]""]" chr2:84971467-chr12:12823870 False 0 Read count too low: 1 < 5 FAIL 1
KATNIP--INSR 1 0 1.0 0.0 ONLY_REF_SPLICE KATNIP^ENSG00000047578.13 chr16:27573956:+ INSR^ENSG00000171105.14 chr19:7267896:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2403:34371:12644 . YES_LDAS 0.0102 GT 1.2729 AG 1.8062 "[""INTERCHROMOSOMAL[chr16--chr19]""]" chr16:27573956-chr19:7267896 False 0 Read count too low: 1 < 5 FAIL 1
KANSL2--HMG20B 1 0 1.0 0.0 INCL_NON_REF_SPLICE KANSL2^ENSG00000139620.13 chr12:48681925:- HMG20B^ENSG00000064961.19 chr19:3573692:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1259:43464:4657 . NO_LDAS 0.0102 GT 1.2867 AG 1.3996 "[""INTERCHROMOSOMAL[chr12--chr19]""]" chr12:48681925-chr19:3573692 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
KANSL2--GFUS 1 0 1.0 0.0 INCL_NON_REF_SPLICE KANSL2^ENSG00000139620.13 chr12:48681452:- GFUS^ENSG00000104522.16 chr8:143612965:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1166:46247:26909 . NO_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chr12--chr8]""]" chr12:48681452-chr8:143612965 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
KANSL1L--HNRNPD 1 0 1.0 0.0 ONLY_REF_SPLICE KANSL1L^ENSG00000144445.17 chr2:210098086:- HNRNPD^ENSG00000138668.19 chr4:82359639:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2479:17795:24204 . YES_LDAS 0.0102 GT 1.9329 AG 1.5656 "[""INTERCHROMOSOMAL[chr2--chr4]""]" chr2:210098086-chr4:82359639 False 0 Read count too low: 1 < 5 FAIL 1
KANK4--LRG1 1 0 1.0 0.0 INCL_NON_REF_SPLICE KANK4^ENSG00000132854.19 chr1:62319273:- LRG1^ENSG00000171236.10 chr19:4538162:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2320:38521:22803 . NO_LDAS 0.0102 GT 1.5546 AG 1.6895 "[""INTERCHROMOSOMAL[chr1--chr19]""]" chr1:62319273-chr19:4538162 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
JPT1--HCLS1 1 0 1.0 0.0 ONLY_REF_SPLICE JPT1^ENSG00000189159.16 chr17:75146666:- HCLS1^ENSG00000180353.11 chr3:121633171:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1456:19162:8833 . NO_LDAS 0.0102 GT 1.8256 AG 1.8062 "[""INTERCHROMOSOMAL[chr17--chr3]""]" chr17:75146666-chr3:121633171 False 0 Read count too low: 1 < 5 FAIL 1
JAML--ATP11C 1 0 1.0 0.0 ONLY_REF_SPLICE JAML^ENSG00000160593.19 chr11:118210487:- ATP11C^ENSG00000101974.14 chrX:139797326:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1230:29315:2906 . YES_LDAS 0.0102 GT 1.5656 AG 1.6402 "[""INTERCHROMOSOMAL[chr11--chrX]""]" chr11:118210487-chrX:139797326 False 0 Read count too low: 1 < 5 FAIL 1
JAK3--AC114964.1 1 0 0.06 0.0 INCL_NON_REF_SPLICE JAK3^ENSG00000105639.20 chr19:17839477:- AC114964.1^ENSG00000248699.1 chr5:15451049:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2293:10765:23238 . NO_LDAS 0.0006 GT 1.6895 AG 1.9656 "[""INTERCHROMOSOMAL[chr19--chr5]""]" chr19:17839477-chr5:15451049 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
JADE3--RBM10 1 0 1.0 0.0 ONLY_REF_SPLICE JADE3^ENSG00000102221.14 chrX:46912340:+ RBM10^ENSG00000182872.16 chrX:47147357:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2210:39573:22999 . YES_LDAS 0.0102 GT 1.7056 AG 1.9329 "[""INTRACHROMOSOMAL[chrX:0.08Mb]"",""NEIGHBORS[83979]""]" chrX:46912340-chrX:47147357 False 0 Read count too low: 1 < 5 FAIL 1
IVD--MPHOSPH9 1 0 1.0 0.0 ONLY_REF_SPLICE IVD^ENSG00000128928.10 chr15:40416362:+ MPHOSPH9^ENSG00000051825.15 chr12:123214834:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1396:27487:3130 . YES_LDAS 0.0102 GT 1.7968 AG 1.6729 "[""INTERCHROMOSOMAL[chr15--chr12]""]" chr15:40416362-chr12:123214834 False 0 Read count too low: 1 < 5 FAIL 1
ITPR1--SUMF1 1 0 1.0 0.0 ONLY_REF_SPLICE ITPR1^ENSG00000150995.20 chr3:4521094:+ SUMF1^ENSG00000144455.14 chr3:4376389:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2433:21047:27876 . YES_LDAS 0.0102 GT 1.8295 AG 1.8892 "[""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""INTRACHROMOSOMAL[chr3:0.03Mb]"",""LOCAL_INVERSION:+:-:[26072]""]" chr3:4521094-chr3:4376389 False 0 Read count too low: 1 < 5 FAIL 1
ITPR1--OSTF1 1 0 1.0 0.0 ONLY_REF_SPLICE ITPR1^ENSG00000150995.20 chr3:4521094:+ OSTF1^ENSG00000134996.12 chr9:75117504:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2410:3443:15601 . YES_LDAS 0.0102 GT 1.8295 AG 1.9329 "[""INTERCHROMOSOMAL[chr3--chr9]""]" chr3:4521094-chr9:75117504 False 0 Read count too low: 1 < 5 FAIL 1
ITPK1--KLC2 1 0 1.0 0.0 INCL_NON_REF_SPLICE ITPK1^ENSG00000100605.17 chr14:92939071:- KLC2^ENSG00000174996.12 chr11:66266941:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1433:3492:2345 . YES_LDAS 0.0102 GT 1.6895 AG 1.8256 "[""INTERCHROMOSOMAL[chr14--chr11]""]" chr14:92939071-chr11:66266941 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ITGB7--NOP56 1 0 1.0 0.0 ONLY_REF_SPLICE ITGB7^ENSG00000139626.16 chr12:53207202:- NOP56^ENSG00000101361.17 chr20:2656401:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1158:41919:20113 . YES_LDAS 0.0102 GT 1.8295 AG 1.8062 "[""INTERCHROMOSOMAL[chr12--chr20]""]" chr12:53207202-chr20:2656401 False 0 Read count too low: 1 < 5 FAIL 1
ITGB7--HCST 1 0 1.0 0.0 INCL_NON_REF_SPLICE ITGB7^ENSG00000139626.16 chr12:53196660:- HCST^ENSG00000126264.10 chr19:35902491:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1225:43424:6437 . YES_LDAS 0.0102 GT 1.7968 AG 1.9086 "[""INTERCHROMOSOMAL[chr12--chr19]""]" chr12:53196660-chr19:35902491 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ITGB2--LINC01547 1 0 1.0 0.0 ONLY_REF_SPLICE ITGB2^ENSG00000160255.18 chr21:44920821:- LINC01547^ENSG00000183250.12 chr21:44935890:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2376:29315:19861 . YES_LDAS 0.0102 GT 1.8062 AG 1.7465 "[""INTRACHROMOSOMAL[chr21:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[825]""]" chr21:44920821-chr21:44935890 False 0 Read count too low: 1 < 5 FAIL 1
ITCH--LRP6 1 0 1.0 0.0 ONLY_REF_SPLICE ITCH^ENSG00000078747.16 chr20:34462221:+ LRP6^ENSG00000070018.9 chr12:12203400:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2454:20060:5344 . YES_LDAS 0.0102 GT 1.9656 AG 1.9656 "[""INTERCHROMOSOMAL[chr20--chr12]""]" chr20:34462221-chr12:12203400 False 0 Read count too low: 1 < 5 FAIL 1
ISOC2--LYSMD1 1 0 1.0 0.0 INCL_NON_REF_SPLICE ISOC2^ENSG00000063241.8 chr19:55454999:- LYSMD1^ENSG00000163155.12 chr1:151165425:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2297:47073:16428 . NO_LDAS 0.0102 GT 1.6049 AG 1.4566 "[""INTERCHROMOSOMAL[chr19--chr1]""]" chr19:55454999-chr1:151165425 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ISL2--MRPL54 1 0 1.0 0.0 ONLY_REF_SPLICE ISL2^ENSG00000159556.10 chr15:76337967:+ MRPL54^ENSG00000183617.5 chr19:3767261:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2388:51878:28506 . NO_LDAS 0.0102 GT 1.9219 AG 1.9329 "[""INTERCHROMOSOMAL[chr15--chr19]""]" chr15:76337967-chr19:3767261 False 0 Read count too low: 1 < 5 FAIL 1
ISG15--UBE2E2 1 0 1.0 0.0 ONLY_REF_SPLICE ISG15^ENSG00000187608.10 chr1:1013576:+ UBE2E2^ENSG00000182247.10 chr3:23499608:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1209:49281:10332 . YES_LDAS 0.0102 GT 1.7465 AG 1.9329 "[""INTERCHROMOSOMAL[chr1--chr3]""]" chr1:1013576-chr3:23499608 False 0 Read count too low: 1 < 5 FAIL 1
IRF7--GPR139 1 0 1.0 0.0 INCL_NON_REF_SPLICE IRF7^ENSG00000185507.21 chr11:613206:- GPR139^ENSG00000180269.8 chr16:20031321:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2383:17091:9085 . NO_LDAS 0.0102 GT 1.9656 AG 1.9899 "[""INTERCHROMOSOMAL[chr11--chr16]""]" chr11:613206-chr16:20031321 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IRF1-AS1--ARAP2 1 0 1.0 0.0 ONLY_REF_SPLICE IRF1-AS1^ENSG00000197536.11 chr5:132449689:+ ARAP2^ENSG00000047365.12 chr4:36148507:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1410:39541:8819 . YES_LDAS 0.0102 GT 1.4566 AG 1.6895 "[""INTERCHROMOSOMAL[chr5--chr4]""]" chr5:132449689-chr4:36148507 False 0 Read count too low: 1 < 5 FAIL 1
IRAK1--SLC25A2 1 0 1.0 0.0 INCL_NON_REF_SPLICE IRAK1^ENSG00000184216.14 chrX:154011643:- SLC25A2^ENSG00000120329.7 chr5:141303472:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2124:9616:15251 . YES_LDAS 0.0102 GC 1.6402 AG 1.8892 "[""INTERCHROMOSOMAL[chrX--chr5]""]" chrX:154011643-chr5:141303472 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IQSEC1--CHFR 1 0 1.0 0.0 INCL_NON_REF_SPLICE IQSEC1^ENSG00000144711.16 chr3:12908349:- CHFR^ENSG00000072609.18 chr12:132833237:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1329:38052:8118 . YES_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chr3--chr12]""]" chr3:12908349-chr12:132833237 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IQGAP1--GPC6 1 0 1.0 0.0 INCL_NON_REF_SPLICE IQGAP1^ENSG00000140575.13 chr15:90466379:+ GPC6^ENSG00000183098.11 chr13:94404843:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1382:43367:21248 . NO_LDAS 0.0102 GT 1.9899 AG 1.3383 "[""INTERCHROMOSOMAL[chr15--chr13]""]" chr15:90466379-chr13:94404843 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IQCH--LARS1 1 0 1.0 0.0 ONLY_REF_SPLICE IQCH^ENSG00000103599.20 chr15:67261394:+ LARS1^ENSG00000133706.19 chr5:146172774:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1203:6202:20771 . YES_LDAS 0.0102 GT 1.5058 AG 1.9329 "[""INTERCHROMOSOMAL[chr15--chr5]""]" chr15:67261394-chr5:146172774 False 0 Read count too low: 1 < 5 FAIL 1
IPO9--FBXL5 1 0 1.0 0.0 INCL_NON_REF_SPLICE IPO9^ENSG00000198700.10 chr1:201848594:+ FBXL5^ENSG00000118564.15 chr4:15659774:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2261:50616:13989 . NO_LDAS 0.0102 GT 1.8892 AG 1.7232 "[""INTERCHROMOSOMAL[chr1--chr4]""]" chr1:201848594-chr4:15659774 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IPO9--CEBPZ 1 0 1.0 0.0 INCL_NON_REF_SPLICE IPO9^ENSG00000198700.10 chr1:201855139:+ CEBPZ^ENSG00000115816.15 chr2:37231507:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2407:42121:11411 . NO_LDAS 0.0102 GT 1.7819 AG 1.9086 "[""INTERCHROMOSOMAL[chr1--chr2]""]" chr1:201855139-chr2:37231507 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IPO8--HNRNPH3 1 0 1.0 0.0 ONLY_REF_SPLICE IPO8^ENSG00000133704.10 chr12:30690496:- HNRNPH3^ENSG00000096746.18 chr10:68339140:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2167:1963:12028 . YES_LDAS 0.0102 GT 1.8256 AG 1.4295 "[""INTERCHROMOSOMAL[chr12--chr10]""]" chr12:30690496-chr10:68339140 False 0 Read count too low: 1 < 5 FAIL 1
IPO5--UBE4A 1 0 1.0 0.0 ONLY_REF_SPLICE IPO5^ENSG00000065150.21 chr13:98000645:+ UBE4A^ENSG00000110344.10 chr11:118373086:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1328:11671:29095 . YES_LDAS 0.0102 GT 1.7465 AG 1.5219 "[""INTERCHROMOSOMAL[chr13--chr11]""]" chr13:98000645-chr11:118373086 False 0 Read count too low: 1 < 5 FAIL 1
IPO13--FAM225A 1 0 0.5 0.0 INCL_NON_REF_SPLICE IPO13^ENSG00000117408.11 chr1:43947415:+ FAM225A^ENSG00000231528.3 chr9:113116517:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1206:20691:17450 . NO_LDAS 0.0051 GT 1.9656 AG 1.9656 "[""INTERCHROMOSOMAL[chr1--chr9]""]" chr1:43947415-chr9:113116517 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IPO11--ODR4 1 0 1.0 0.0 ONLY_REF_SPLICE IPO11^ENSG00000086200.17 chr5:62437417:+ ODR4^ENSG00000157181.16 chr1:186406083:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1215:38821:2808 . YES_LDAS 0.0102 GT 1.7968 AG 1.7465 "[""INTERCHROMOSOMAL[chr5--chr1]""]" chr5:62437417-chr1:186406083 False 0 Read count too low: 1 < 5 FAIL 1
IPCEF1--RNF146 1 0 1.0 0.0 ONLY_REF_SPLICE IPCEF1^ENSG00000074706.13 chr6:154246591:- RNF146^ENSG00000118518.16 chr6:127280231:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2322:12010:20323 . YES_LDAS 0.0102 GT 1.7968 AG 1.6402 "[""INTRACHROMOSOMAL[chr6:26.87Mb]""]" chr6:154246591-chr6:127280231 False 0 Read count too low: 1 < 5 FAIL 1
IPCEF1--RMND1 1 0 1.0 0.0 ONLY_REF_SPLICE IPCEF1^ENSG00000074706.13 chr6:154199668:- RMND1^ENSG00000155906.19 chr6:151445825:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2128:37146:15937 . YES_LDAS 0.0102 GT 1.7968 AG 1.7819 "[""INTRACHROMOSOMAL[chr6:2.70Mb]""]" chr6:154199668-chr6:151445825 False 0 Read count too low: 1 < 5 FAIL 1
IP6K2--TPP2 1 0 1.0 0.0 INCL_NON_REF_SPLICE IP6K2^ENSG00000068745.15 chr3:48695173:- TPP2^ENSG00000134900.12 chr13:102674381:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2383:17374:7249 . YES_LDAS 0.0102 GT 1.8323 AG 1.9086 "[""INTERCHROMOSOMAL[chr3--chr13]""]" chr3:48695173-chr13:102674381 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
INVS--USO1 1 0 1.0 0.0 ONLY_REF_SPLICE INVS^ENSG00000119509.13 chr9:100126549:+ USO1^ENSG00000138768.15 chr4:75752373:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1304:22455:6857 . YES_LDAS 0.0102 GT 1.9329 AG 1.8323 "[""INTERCHROMOSOMAL[chr9--chr4]""]" chr9:100126549-chr4:75752373 False 0 Read count too low: 1 < 5 FAIL 1
INTS6--CSE1L 1 0 1.0 0.0 ONLY_REF_SPLICE INTS6^ENSG00000102786.15 chr13:51451025:- CSE1L^ENSG00000124207.17 chr20:49090742:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2133:25375:14858 . YES_LDAS 0.0102 GT 1.9086 AG 1.9086 "[""INTERCHROMOSOMAL[chr13--chr20]""]" chr13:51451025-chr20:49090742 False 0 Read count too low: 1 < 5 FAIL 1
INPP5D--SRSF5 1 0 1.0 0.0 INCL_NON_REF_SPLICE INPP5D^ENSG00000168918.14 chr2:233125886:+ SRSF5^ENSG00000100650.16 chr14:69766919:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2410:20456:28674 . NO_LDAS 0.0102 GT 1.8892 AG 1.5301 "[""INTERCHROMOSOMAL[chr2--chr14]""]" chr2:233125886-chr14:69766919 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
INPP5A--ZNF410 1 0 1.0 0.0 ONLY_REF_SPLICE INPP5A^ENSG00000068383.19 chr10:132538171:+ ZNF410^ENSG00000119725.20 chr14:73904902:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1377:17034:7221 . YES_LDAS 0.0102 GT 1.8892 AG 1.9329 "[""INTERCHROMOSOMAL[chr10--chr14]""]" chr10:132538171-chr14:73904902 False 0 Read count too low: 1 < 5 FAIL 1
INPP5A--MIA2 1 0 1.0 0.0 ONLY_REF_SPLICE INPP5A^ENSG00000068383.19 chr10:132607956:+ MIA2^ENSG00000150527.17 chr14:39276934:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1239:41490:17240 . YES_LDAS 0.0102 GT 1.9899 AG 1.8892 "[""INTERCHROMOSOMAL[chr10--chr14]""]" chr10:132607956-chr14:39276934 False 0 Read count too low: 1 < 5 FAIL 1
INCENP--CFAP100 1 0 1.0 0.0 INCL_NON_REF_SPLICE INCENP^ENSG00000149503.13 chr11:62141511:+ CFAP100^ENSG00000163885.12 chr3:126434362:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1467:50171:12322 . NO_LDAS 0.0102 GT 1.9329 AG 1.4566 "[""INTERCHROMOSOMAL[chr11--chr3]""]" chr11:62141511-chr3:126434362 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IMP4--TRAP1 1 0 1.0 0.0 ONLY_REF_SPLICE IMP4^ENSG00000136718.10 chr2:130343194:+ TRAP1^ENSG00000126602.11 chr16:3690985:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2311:1874:16189 . YES_LDAS 0.0102 GT 1.6402 AG 1.8892 "[""INTERCHROMOSOMAL[chr2--chr16]""]" chr2:130343194-chr16:3690985 False 0 Read count too low: 1 < 5 FAIL 1
ILK--H4-16 1 0 1.0 0.0 INCL_NON_REF_SPLICE ILK^ENSG00000166333.14 chr11:6604063:+ H4-16^ENSG00000197837.3 chr12:14771120:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2156:31354:9660 . NO_LDAS 0.0102 GT 1.6402 AG 1.7819 "[""INTERCHROMOSOMAL[chr11--chr12]""]" chr11:6604063-chr12:14771120 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IL16--SHKBP1 1 0 1.0 0.0 INCL_NON_REF_SPLICE IL16^ENSG00000172349.17 chr15:81297078:+ SHKBP1^ENSG00000160410.15 chr19:40591367:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1311:34517:15839 . NO_LDAS 0.0102 GT 1.585 AG 1.4566 "[""INTERCHROMOSOMAL[chr15--chr19]""]" chr15:81297078-chr19:40591367 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IL15RA--GDI2 1 0 1.0 0.0 ONLY_REF_SPLICE IL15RA^ENSG00000134470.21 chr10:5966145:- GDI2^ENSG00000057608.17 chr10:5795019:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1265:32624:7628 . YES_LDAS 0.0102 GT 1.9086 AG 1.9329 "[""INTRACHROMOSOMAL[chr10:0.10Mb]""]" chr10:5966145-chr10:5795019 False 0 Read count too low: 1 < 5 FAIL 1
IFI44L--IL6ST 1 0 1.0 0.0 ONLY_REF_SPLICE IFI44L^ENSG00000137959.17 chr1:78637203:+ IL6ST^ENSG00000134352.20 chr5:55954992:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2195:2116:9323 . YES_LDAS 0.0102 GT 1.7819 AG 1.8062 "[""INTERCHROMOSOMAL[chr1--chr5]""]" chr1:78637203-chr5:55954992 False 0 Read count too low: 1 < 5 FAIL 1
IFI35--RPL27 1 0 1.0 0.0 ONLY_REF_SPLICE IFI35^ENSG00000068079.8 chr17:43012277:+ RPL27^ENSG00000131469.15 chr17:43002673:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1170:51417:20925 . YES_LDAS 0.0102 GT 1.7056 AG 1.8892 "[""INTRACHROMOSOMAL[chr17:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3781]""]" chr17:43012277-chr17:43002673 True read_through|ribosomal genes|RPL27 0 Blacklisted FAIL 1
IFI16--RBBP8P1 1 0 1.0 0.0 INCL_NON_REF_SPLICE IFI16^ENSG00000163565.19 chr1:159049599:+ RBBP8P1^ENSG00000230399.1 chrX:118633043:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1267:27770:1406 . NO_LDAS 0.0102 GT 1.9329 AG 1.5546 "[""INTERCHROMOSOMAL[chr1--chrX]""]" chr1:159049599-chrX:118633043 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IER5--ATP2A2 1 0 1.0 0.0 INCL_NON_REF_SPLICE IER5^ENSG00000162783.11 chr1:181088735:+ ATP2A2^ENSG00000174437.17 chr12:110340659:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1279:14348:28044 . NO_LDAS 0.0102 GT 1.8323 AG 1.8062 "[""INTERCHROMOSOMAL[chr1--chr12]""]" chr1:181088735-chr12:110340659 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IDE--CLEC4A 1 0 0.33 0.0 ONLY_REF_SPLICE IDE^ENSG00000119912.18 chr10:92555372:- CLEC4A^ENSG00000111729.15 chr12:8129264:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2359:22058:15839 . NO_LDAS 0.0034 GT 1.9329 AG 1.3996 "[""INTERCHROMOSOMAL[chr10--chr12]""]" chr10:92555372-chr12:8129264 False 0 Read count too low: 1 < 5 FAIL 1
ID2--VASP 1 0 1.0 0.0 INCL_NON_REF_SPLICE ID2^ENSG00000115738.10 chr2:8682072:+ VASP^ENSG00000125753.14 chr19:45507732:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2118:7359:26390 . NO_LDAS 0.0102 GT 1.8323 AG 1.7056 "[""INTERCHROMOSOMAL[chr2--chr19]""]" chr2:8682072-chr19:45507732 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IARS2--CBL 1 0 1.0 0.0 ONLY_REF_SPLICE IARS2^ENSG00000067704.10 chr1:220096226:+ CBL^ENSG00000110395.7 chr11:119232448:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1147:10376:20407 . YES_LDAS 0.0102 GT 1.8323 AG 1.2729 "[""INTERCHROMOSOMAL[chr1--chr11]""]" chr1:220096226-chr11:119232448 False 0 Read count too low: 1 < 5 FAIL 1
IARS1--IPO5 1 0 1.0 0.0 ONLY_REF_SPLICE IARS1^ENSG00000196305.18 chr9:92268174:- IPO5^ENSG00000065150.21 chr13:97982503:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1215:14729:23574 . NO_LDAS 0.0102 GT 1.8062 AG 1.8295 "[""INTERCHROMOSOMAL[chr9--chr13]""]" chr9:92268174-chr13:97982503 False 0 Read count too low: 1 < 5 FAIL 1
IARS1--FAM193B 1 0 1.0 0.0 INCL_NON_REF_SPLICE IARS1^ENSG00000196305.18 chr9:92250720:- FAM193B^ENSG00000146067.16 chr5:177524947:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1184:5150:25395 . YES_LDAS 0.0102 GT 1.7232 AG 1.8295 "[""INTERCHROMOSOMAL[chr9--chr5]""]" chr9:92250720-chr5:177524947 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IARS1--CHFR 1 0 1.0 0.0 ONLY_REF_SPLICE IARS1^ENSG00000196305.18 chr9:92243216:- CHFR^ENSG00000072609.18 chr12:132853573:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1312:37195:18039 . YES_LDAS 0.0102 GT 1.7232 AG 1.9219 "[""INTERCHROMOSOMAL[chr9--chr12]""]" chr9:92243216-chr12:132853573 False 0 Read count too low: 1 < 5 FAIL 1
HYOU1--GNAT1 1 0 1.0 0.0 INCL_NON_REF_SPLICE HYOU1^ENSG00000149428.19 chr11:119047752:- GNAT1^ENSG00000114349.10 chr3:50194123:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2488:11056:3060 . NO_LDAS 0.0102 GT 1.7232 AG 1.9086 "[""INTERCHROMOSOMAL[chr11--chr3]""]" chr11:119047752-chr3:50194123 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HULC--AGAP5 1 0 1.0 0.0 INCL_NON_REF_SPLICE HULC^ENSG00000285219.2 chr6:8547214:+ AGAP5^ENSG00000172650.14 chr10:73697720:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2422:27713:9940 . NO_LDAS 0.0102 GT 1.9329 AG 1.9329 "[""INTERCHROMOSOMAL[chr6--chr10]""]" chr6:8547214-chr10:73697720 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
HTT--CSNK1D 1 0 1.0 0.0 ONLY_REF_SPLICE HTT^ENSG00000197386.13 chr4:3212709:+ CSNK1D^ENSG00000141551.14 chr17:82244831:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1315:15222:3046 . YES_LDAS 0.0102 GT 1.9656 AG 1.7819 "[""INTERCHROMOSOMAL[chr4--chr17]""]" chr4:3212709-chr17:82244831 False 0 Read count too low: 1 < 5 FAIL 1
HSPA9--TRIM22 1 0 1.0 0.0 ONLY_REF_SPLICE HSPA9^ENSG00000113013.16 chr5:138559864:- TRIM22^ENSG00000132274.16 chr11:5698315:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1432:31216:4713 . YES_LDAS 0.0102 GT 1.5301 AG 1.7819 "[""INTERCHROMOSOMAL[chr5--chr11]""]" chr5:138559864-chr11:5698315 False 0 Read count too low: 1 < 5 FAIL 1
HSP90AA1--HDAC1 1 0 1.0 0.0 ONLY_REF_SPLICE HSP90AA1^ENSG00000080824.19 chr14:102139250:- HDAC1^ENSG00000116478.12 chr1:32324479:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1207:13693:16484 . YES_LDAS 0.0102 GT 1.9656 AG 1.8892 "[""INTERCHROMOSOMAL[chr14--chr1]""]" chr14:102139250-chr1:32324479 False 0 Read count too low: 1 < 5 FAIL 1
HSH2D--PPAN 1 0 1.0 0.0 ONLY_REF_SPLICE HSH2D^ENSG00000196684.12 chr19:16148875:+ PPAN^ENSG00000130810.20 chr19:10109631:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2274:12172:15895 . YES_LDAS 0.0102 GT 1.9219 AG 1.9086 "[""INTRACHROMOSOMAL[chr19:6.02Mb]""]" chr19:16148875-chr19:10109631 False 0 Read count too low: 1 < 5 FAIL 1
HSF1--ARL6IP4 1 0 1.0 0.0 ONLY_REF_SPLICE HSF1^ENSG00000185122.11 chr8:144314054:+ ARL6IP4^ENSG00000182196.13 chr12:122982620:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2220:17431:12196 . YES_LDAS 0.0102 GT 1.9086 AG 1.5656 "[""INTERCHROMOSOMAL[chr8--chr12]""]" chr8:144314054-chr12:122982620 False 0 Read count too low: 1 < 5 FAIL 1
HSDL1--CIDEB 1 0 0.5 0.0 INCL_NON_REF_SPLICE HSDL1^ENSG00000103160.12 chr16:84144361:- CIDEB^ENSG00000136305.11 chr14:24311020:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1476:30367:18740 . NO_LDAS 0.0051 GT 1.8295 AG 1.8323 "[""INTERCHROMOSOMAL[chr16--chr14]""]" chr16:84144361-chr14:24311020 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HSD17B4--PPP1CC 1 0 1.0 0.0 ONLY_REF_SPLICE HSD17B4^ENSG00000133835.17 chr5:119472576:+ PPP1CC^ENSG00000186298.12 chr12:110731901:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2106:39945:8539 . YES_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTERCHROMOSOMAL[chr5--chr12]""]" chr5:119472576-chr12:110731901 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
HS6ST1--FP236383.3 1 0 0.33 0.0 ONLY_REF_SPLICE HS6ST1^ENSG00000136720.7 chr2:128318037:- FP236383.3^ENSG00000280441.3 chr21:8450147:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2388:29533:10570 . YES_LDAS 0.0034 GT 1.6895 AG 1.9329 "[""INTERCHROMOSOMAL[chr2--chr21]""]" chr2:128318037-chr21:8450147 False 0 Read count too low: 1 < 5 FAIL 1
HS6ST1--FP236383.3 1 0 0.33 0.0 ONLY_REF_SPLICE HS6ST1^ENSG00000136720.7 chr2:128318037:- FP236383.3^ENSG00000280441.3 chr21:8405960:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2388:29533:10570 . YES_LDAS 0.0034 GT 1.6895 AG 1.9329 "[""INTERCHROMOSOMAL[chr2--chr21]""]" chr2:128318037-chr21:8405960 False 0 Read count too low: 1 < 5 FAIL 1
HS2ST1--SELENOF 1 0 1.0 0.0 ONLY_REF_SPLICE HS2ST1^ENSG00000153936.17 chr1:86958507:+ SELENOF^ENSG00000183291.17 chr1:86880725:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2177:6153:11972 . NO_LDAS 0.0102 GT 1.7819 AG 1.9656 "[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_INVERSION:+:-:[211]""]" chr1:86958507-chr1:86880725 False 0 Read count too low: 1 < 5 FAIL 1
HS2ST1--SELENOF 1 0 1.0 0.0 ONLY_REF_SPLICE HS2ST1^ENSG00000153936.17 chr1:86915160:+ SELENOF^ENSG00000183291.17 chr1:86903448:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2318:45883:5372 . YES_LDAS 0.0102 GT 1.8892 AG 1.4295 "[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_INVERSION:+:-:[211]""]" chr1:86915160-chr1:86903448 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
HS2ST1--SELENOF 1 0 1.0 0.0 ONLY_REF_SPLICE HS2ST1^ENSG00000153936.17 chr1:86915160:+ SELENOF^ENSG00000183291.17 chr1:86880725:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1117:41830:28870 . YES_LDAS 0.0102 GT 1.8892 AG 1.9656 "[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_INVERSION:+:-:[211]""]" chr1:86915160-chr1:86880725 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
HS1BP3--ZNFX1 1 0 1.0 0.0 INCL_NON_REF_SPLICE HS1BP3^ENSG00000118960.13 chr2:20622994:- ZNFX1^ENSG00000124201.15 chr20:49248028:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1296:17738:24022 . NO_LDAS 0.0102 GT 1.9899 AG 1.7968 "[""INTERCHROMOSOMAL[chr2--chr20]""]" chr2:20622994-chr20:49248028 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HPS5--FXYD2 1 0 1.0 0.0 INCL_NON_REF_SPLICE HPS5^ENSG00000110756.18 chr11:18291442:- FXYD2^ENSG00000137731.14 chr11:117819204:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1138:21961:2583 . NO_LDAS 0.0102 GT 1.5656 AG 1.7465 "[""INTRACHROMOSOMAL[chr11:99.48Mb]""]" chr11:18291442-chr11:117819204 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HPS5--FXYD2 1 0 1.0 0.0 INCL_NON_REF_SPLICE HPS5^ENSG00000110756.18 chr11:18286591:- FXYD2^ENSG00000137731.14 chr11:117819204:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2342:24154:2822 . NO_LDAS 0.0102 GT 1.9899 AG 1.7465 "[""INTRACHROMOSOMAL[chr11:99.48Mb]""]" chr11:18286591-chr11:117819204 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HPS1--CHEK2 1 0 1.0 0.0 ONLY_REF_SPLICE HPS1^ENSG00000107521.20 chr10:98443124:- CHEK2^ENSG00000183765.23 chr22:28734727:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1117:34816:2261 . YES_LDAS 0.0102 GT 1.2729 AG 1.7819 "[""INTERCHROMOSOMAL[chr10--chr22]""]" chr10:98443124-chr22:28734727 False 0 Read count too low: 1 < 5 FAIL 1
HOXB3--KDM4B 1 0 1.0 0.0 ONLY_REF_SPLICE HOXB3^ENSG00000120093.12 chr17:48604480:- KDM4B^ENSG00000127663.15 chr19:5047476:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1340:7068:4167 . YES_LDAS 0.0102 GT 1.9329 AG 1.7968 "[""INTERCHROMOSOMAL[chr17--chr19]""]" chr17:48604480-chr19:5047476 False 0 Read count too low: 1 < 5 FAIL 1
HOTAIRM1--FAM53B 1 0 1.0 0.0 ONLY_REF_SPLICE HOTAIRM1^ENSG00000233429.9 chr7:27096388:+ FAM53B^ENSG00000189319.14 chr10:124706887:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2468:36612:29333 . NO_LDAS 0.0102 GT 1.8323 AG 1.9899 "[""INTERCHROMOSOMAL[chr7--chr10]""]" chr7:27096388-chr10:124706887 False 0 Read count too low: 1 < 5 FAIL 1
HNRNPKP3--CACNB2 1 0 1.0 0.0 INCL_NON_REF_SPLICE HNRNPKP3^ENSG00000251557.2 chr11:43261684:- CACNB2^ENSG00000165995.22 chr10:18541050:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1284:39096:23406 . NO_LDAS 0.0102 GT 1.7056 AG 1.8892 "[""INTERCHROMOSOMAL[chr11--chr10]""]" chr11:43261684-chr10:18541050 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HNRNPK--GET4 1 0 1.0 0.0 ONLY_REF_SPLICE HNRNPK^ENSG00000165119.21 chr9:83980153:- GET4^ENSG00000239857.7 chr7:886056:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1169:15263:16287 . YES_LDAS 0.0102 GT 1.7056 AG 1.9899 "[""INTERCHROMOSOMAL[chr9--chr7]""]" chr9:83980153-chr7:886056 False 0 Read count too low: 1 < 5 FAIL 1
HNRNPF--ZNF516 1 0 1.0 0.0 INCL_NON_REF_SPLICE HNRNPF^ENSG00000169813.16 chr10:43409131:- ZNF516^ENSG00000101493.11 chr18:76443211:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1456:40188:12154 . YES_LDAS 0.0102 GT 1.8892 AG 1.7819 "[""INTERCHROMOSOMAL[chr10--chr18]""]" chr10:43409131-chr18:76443211 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HNRNPDL--RPS27AP16 1 0 1.0 0.0 INCL_NON_REF_SPLICE HNRNPDL^ENSG00000152795.18 chr4:82429248:- RPS27AP16^ENSG00000224631.4 chr16:61055930:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1329:41555:13177 . YES_LDAS 0.0102 GT 1.8892 AG 1.8062 "[""INTERCHROMOSOMAL[chr4--chr16]""]" chr4:82429248-chr16:61055930 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HNRNPDL--FARSB 1 0 1.0 0.0 ONLY_REF_SPLICE HNRNPDL^ENSG00000152795.18 chr4:82426037:- FARSB^ENSG00000116120.11 chr2:222624479:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2444:21217:5862 . YES_LDAS 0.0102 GT 1.7968 AG 1.5546 "[""INTERCHROMOSOMAL[chr4--chr2]""]" chr4:82426037-chr2:222624479 False 0 Read count too low: 1 < 5 FAIL 1
HNRNPD--CHD1 1 0 1.0 0.0 ONLY_REF_SPLICE HNRNPD^ENSG00000138668.19 chr4:82371528:- CHD1^ENSG00000153922.11 chr5:98903908:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1385:39476:3242 . YES_LDAS 0.0102 GT 1.7056 AG 1.7465 "[""INTERCHROMOSOMAL[chr4--chr5]""]" chr4:82371528-chr5:98903908 False 0 Read count too low: 1 < 5 FAIL 1
HNRNPA3--PLCD4 1 0 1.0 0.0 INCL_NON_REF_SPLICE HNRNPA3^ENSG00000170144.21 chr2:177222657:+ PLCD4^ENSG00000115556.14 chr2:218629022:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1429:1461:25479 . NO_LDAS 0.0102 GT 1.053 AG 1.9656 "[""INTRACHROMOSOMAL[chr2:41.38Mb]""]" chr2:177222657-chr2:218629022 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HNRNPA2B1--ZBTB18 1 0 1.0 0.0 ONLY_REF_SPLICE HNRNPA2B1^ENSG00000122566.22 chr7:26200572:- ZBTB18^ENSG00000179456.10 chr1:244053788:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2266:34250:20169 . YES_LDAS 0.0102 GT 1.8295 AG 1.8062 "[""INTERCHROMOSOMAL[chr7--chr1]""]" chr7:26200572-chr1:244053788 False 0 Read count too low: 1 < 5 FAIL 1
HNRNPA2B1--MYO18A 1 0 1.0 0.0 ONLY_REF_SPLICE HNRNPA2B1^ENSG00000122566.22 chr7:26200572:- MYO18A^ENSG00000196535.17 chr17:29114097:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2124:38489:12210 . YES_LDAS 0.0102 GT 1.8295 AG 1.9086 "[""INTERCHROMOSOMAL[chr7--chr17]""]" chr7:26200572-chr17:29114097 False 0 Read count too low: 1 < 5 FAIL 1
HNF1B--CLSTN1 1 0 1.0 0.0 INCL_NON_REF_SPLICE HNF1B^ENSG00000275410.5 chr17:37739567:- CLSTN1^ENSG00000171603.18 chr1:9744620:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2419:51651:10150 . NO_LDAS 0.0102 GT 1.7465 AG 1.6729 "[""INTERCHROMOSOMAL[chr17--chr1]""]" chr17:37739567-chr1:9744620 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HMGA1--TRIOBP 1 0 1.0 0.0 INCL_NON_REF_SPLICE HMGA1^ENSG00000137309.20 chr6:34243522:+ TRIOBP^ENSG00000100106.22 chr22:37758133:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1494:5975:12196 . NO_LDAS 0.0102 GT 1.8295 AG 1.7819 "[""INTERCHROMOSOMAL[chr6--chr22]""]" chr6:34243522-chr22:37758133 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HMGA1--PKP4P1 1 0 1.0 0.0 INCL_NON_REF_SPLICE HMGA1^ENSG00000137309.20 chr6:34240903:+ PKP4P1^ENSG00000229670.2 chr2:209179162:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2425:5223:19776 . YES_LDAS 0.0102 GT 1.7056 AG 1.8892 "[""INTERCHROMOSOMAL[chr6--chr2]""]" chr6:34240903-chr2:209179162 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HMG20A--TBC1D2B 1 0 1.0 0.0 ONLY_REF_SPLICE HMG20A^ENSG00000140382.15 chr15:77421004:+ TBC1D2B^ENSG00000167202.11 chr15:78013317:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1157:45511:15881 . YES_LDAS 0.0102 GT 1.8892 AG 1.4295 "[""INTRACHROMOSOMAL[chr15:0.50Mb]""]" chr15:77421004-chr15:78013317 False 0 Read count too low: 1 < 5 FAIL 1
HMBS--SPG7 1 0 1.0 0.0 INCL_NON_REF_SPLICE HMBS^ENSG00000256269.10 chr11:119091526:+ SPG7^ENSG00000197912.16 chr16:89521294:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1325:46401:27820 . NO_LDAS 0.0102 GT 1.6729 AG 1.7968 "[""INTERCHROMOSOMAL[chr11--chr16]""]" chr11:119091526-chr16:89521294 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HLF--DDX58 1 0 0.5 0.0 INCL_NON_REF_SPLICE HLF^ENSG00000108924.14 chr17:55265062:+ DDX58^ENSG00000107201.11 chr9:32500936:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1377:26661:3662 . NO_LDAS 0.0051 GT 0.9056 AG 1.9329 "[""INTERCHROMOSOMAL[chr17--chr9]""]" chr17:55265062-chr9:32500936 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HLA-F--SP1 1 0 1.0 0.0 ONLY_REF_SPLICE HLA-F^ENSG00000204642.14 chr6:29726043:+ SP1^ENSG00000185591.10 chr12:53406585:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2341:28199:14396 . YES_LDAS 0.0102 GT 1.9656 AG 1.9656 "[""INTERCHROMOSOMAL[chr6--chr12]""]" chr6:29726043-chr12:53406585 False 0 Read count too low: 1 < 5 FAIL 1
HLA-DRB9--MTX2 1 0 1.0 0.0 INCL_NON_REF_SPLICE HLA-DRB9^ENSG00000196301.3 chr6:32459820:- MTX2^ENSG00000128654.14 chr2:176296860:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1158:3014:8300 . YES_LDAS 0.0102 GT 1.8256 AG 1.9656 "[""INTERCHROMOSOMAL[chr6--chr2]""]" chr6:32459820-chr2:176296860 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HLA-DQB2--SPRY4 1 0 1.0 0.0 INCL_NON_REF_SPLICE HLA-DQB2^ENSG00000232629.9 chr6:32757773:- SPRY4^ENSG00000187678.10 chr5:142314460:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2246:20788:27371 . NO_LDAS 0.0102 GT 1.7056 AG 1.7819 "[""INTERCHROMOSOMAL[chr6--chr5]""]" chr6:32757773-chr5:142314460 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HLA-DQA1--AMMECR1L 1 0 0.5 0.0 INCL_NON_REF_SPLICE HLA-DQA1^ENSG00000196735.13 chr6:32642670:+ AMMECR1L^ENSG00000144233.11 chr2:127874136:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1356:43351:26264 . YES_LDAS 0.0051 GT 1.5656 AG 1.9899 "[""INTERCHROMOSOMAL[chr6--chr2]""]" chr6:32642670-chr2:127874136 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HLA-DPB1--PIP5K1A 1 0 1.0 0.0 INCL_NON_REF_SPLICE HLA-DPB1^ENSG00000223865.11 chr6:33085050:+ PIP5K1A^ENSG00000143398.20 chr1:151242180:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1250:45689:14368 . YES_LDAS 0.0102 GT 1.9086 AG 1.9656 "[""INTERCHROMOSOMAL[chr6--chr1]""]" chr6:33085050-chr1:151242180 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HLA-DPB1--COA1 1 0 1.0 0.0 ONLY_REF_SPLICE HLA-DPB1^ENSG00000223865.11 chr6:33076141:+ COA1^ENSG00000106603.19 chr7:43633408:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2366:28449:24863 . YES_LDAS 0.0102 GT 1.7819 AG 1.5329 "[""INTERCHROMOSOMAL[chr6--chr7]""]" chr6:33076141-chr7:43633408 False 0 Read count too low: 1 < 5 FAIL 1
HLA-DMA--SMARCD1 1 0 1.0 0.0 ONLY_REF_SPLICE HLA-DMA^ENSG00000204257.15 chr6:32952949:- SMARCD1^ENSG00000066117.15 chr12:50089884:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1186:44759:16428 . YES_LDAS 0.0102 GT 1.8323 AG 1.7819 "[""INTERCHROMOSOMAL[chr6--chr12]""]" chr6:32952949-chr12:50089884 False 0 Read count too low: 1 < 5 FAIL 1
HIVEP3--MCF2L 1 0 1.0 0.0 INCL_NON_REF_SPLICE HIVEP3^ENSG00000127124.16 chr1:41584214:- MCF2L^ENSG00000126217.21 chr13:113046126:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1268:19906:3592 . NO_LDAS 0.0102 GT 1.9086 AG 1.7465 "[""INTERCHROMOSOMAL[chr1--chr13]""]" chr1:41584214-chr13:113046126 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HIPK2--ASH1L 1 0 1.0 0.0 ONLY_REF_SPLICE HIPK2^ENSG00000064393.16 chr7:139777605:- ASH1L^ENSG00000116539.14 chr1:155459898:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2128:21128:18908 . NO_LDAS 0.0102 GT 1.8892 AG 1.7232 "[""INTERCHROMOSOMAL[chr7--chr1]""]" chr7:139777605-chr1:155459898 False 0 Read count too low: 1 < 5 FAIL 1
HIP1R--STK24 1 0 1.0 0.0 INCL_NON_REF_SPLICE HIP1R^ENSG00000130787.14 chr12:122849904:+ STK24^ENSG00000102572.15 chr13:98460420:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1330:20198:21388 . NO_LDAS 0.0102 GT 1.9086 AG 1.7819 "[""INTERCHROMOSOMAL[chr12--chr13]""]" chr12:122849904-chr13:98460420 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HINT1--INO80E 1 0 1.0 0.0 ONLY_REF_SPLICE HINT1^ENSG00000169567.13 chr5:131162572:- INO80E^ENSG00000169592.15 chr16:30000758:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1164:41410:26068 . YES_LDAS 0.0102 GT 1.5656 AG 1.9656 "[""INTERCHROMOSOMAL[chr5--chr16]""]" chr5:131162572-chr16:30000758 False 0 Read count too low: 1 < 5 FAIL 1
HERC4--ERO1A 1 0 1.0 0.0 ONLY_REF_SPLICE HERC4^ENSG00000148634.16 chr10:68044404:- ERO1A^ENSG00000197930.13 chr14:52658150:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2284:16250:25199 . YES_LDAS 0.0102 GT 1.9086 AG 1.7819 "[""INTERCHROMOSOMAL[chr10--chr14]""]" chr10:68044404-chr14:52658150 False 0 Read count too low: 1 < 5 FAIL 1
HELZ2--NF2 1 0 1.0 0.0 INCL_NON_REF_SPLICE HELZ2^ENSG00000130589.16 chr20:63564433:- NF2^ENSG00000186575.19 chr22:29674836:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2266:28401:20351 . NO_LDAS 0.0102 GT 1.1589 AG 1.5219 "[""INTERCHROMOSOMAL[chr20--chr22]""]" chr20:63564433-chr22:29674836 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HDGFL2--ASH1L 1 0 1.0 0.0 ONLY_REF_SPLICE HDGFL2^ENSG00000167674.15 chr19:4472422:+ ASH1L^ENSG00000116539.14 chr1:155562295:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2280:14462:13835 . YES_LDAS 0.0102 GT 1.8323 AG 1.8892 "[""INTERCHROMOSOMAL[chr19--chr1]""]" chr19:4472422-chr1:155562295 False 0 Read count too low: 1 < 5 FAIL 1
HDAC3--HNRNPUL1 1 0 1.0 0.0 ONLY_REF_SPLICE HDAC3^ENSG00000171720.10 chr5:141636548:- HNRNPUL1^ENSG00000105323.17 chr19:41292245:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2220:51336:12490 . YES_LDAS 0.0102 GT 1.7465 AG 1.5656 "[""INTERCHROMOSOMAL[chr5--chr19]""]" chr5:141636548-chr19:41292245 False 0 Read count too low: 1 < 5 FAIL 1
HCP5--PIK3R2 1 0 0.5 0.0 INCL_NON_REF_SPLICE HCP5^ENSG00000206337.12 chr6:31463205:+ PIK3R2^ENSG00000105647.19 chr19:18162464:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2112:2828:19076 . NO_LDAS 0.0051 GT 1.7465 AG 1.9656 "[""INTERCHROMOSOMAL[chr6--chr19]""]" chr6:31463205-chr19:18162464 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HCCS--TTC3 1 0 1.0 0.0 ONLY_REF_SPLICE HCCS^ENSG00000004961.15 chrX:11111518:+ TTC3^ENSG00000182670.13 chr21:37108392:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1359:6898:21052 . YES_LDAS 0.0102 GT 1.7465 AG 1.9656 "[""INTERCHROMOSOMAL[chrX--chr21]""]" chrX:11111518-chr21:37108392 False 0 Read count too low: 1 < 5 FAIL 1
HADH--ANXA11 1 0 1.0 0.0 INCL_NON_REF_SPLICE HADH^ENSG00000138796.17 chr4:108034464:+ ANXA11^ENSG00000122359.18 chr10:80205489:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2401:20764:18221 . NO_LDAS 0.0102 GT 1.6895 AG 1.6402 "[""INTERCHROMOSOMAL[chr4--chr10]""]" chr4:108034464-chr10:80205489 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
H4C9--KDM2B 1 0 1.0 0.0 INCL_NON_REF_SPLICE H4C9^ENSG00000276180.1 chr6:27139330:+ KDM2B^ENSG00000089094.19 chr12:121578946:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2491:6121:27834 . NO_LDAS 0.0102 GT 1.5058 AG 1.7968 "[""INTERCHROMOSOMAL[chr6--chr12]""]" chr6:27139330-chr12:121578946 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
H3C14--JUND 1 0 0.5 0.0 INCL_NON_REF_SPLICE H3C14^ENSG00000203811.1 chr1:149840718:- JUND^ENSG00000130522.6 chr19:18281303:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1469:36491:19566 . YES_LDAS 0.0051 GT 1.9086 AG 1.8323 "[""INTERCHROMOSOMAL[chr1--chr19]""]" chr1:149840718-chr19:18281303 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
H2BC5--ZEB1 1 0 1.0 0.0 ONLY_REF_SPLICE H2BC5^ENSG00000158373.8 chr6:26158559:+ ZEB1^ENSG00000148516.22 chr10:31495779:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2355:21096:27035 . YES_LDAS 0.0102 GT 1.8892 AG 1.2867 "[""INTERCHROMOSOMAL[chr6--chr10]""]" chr6:26158559-chr10:31495779 False 0 Read count too low: 1 < 5 FAIL 1
H2BC18--NAP1L1 1 0 0.5 0.0 ONLY_REF_SPLICE H2BC18^ENSG00000203814.6 chr1:149811947:- NAP1L1^ENSG00000187109.15 chr12:76049250:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2206:29283:26783 . YES_LDAS 0.0051 GT 1.9086 AG 0.9968 "[""INTERCHROMOSOMAL[chr1--chr12]""]" chr1:149811947-chr12:76049250 False 0 Read count too low: 1 < 5 FAIL 1
GTPBP4--EIF4A2 1 0 1.0 0.0 ONLY_REF_SPLICE GTPBP4^ENSG00000107937.19 chr10:1014312:+ EIF4A2^ENSG00000156976.17 chr3:186787127:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1138:16557:18137 . YES_LDAS 0.0102 GT 1.7968 AG 1.5656 "[""INTERCHROMOSOMAL[chr10--chr3]""]" chr10:1014312-chr3:186787127 False 0 Read count too low: 1 < 5 FAIL 1
GTPBP10--RFX3 1 0 1.0 0.0 ONLY_REF_SPLICE GTPBP10^ENSG00000105793.16 chr7:90354549:+ RFX3^ENSG00000080298.15 chr9:3293258:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1364:13418:16708 . YES_LDAS 0.0102 GT 1.5058 AG 1.8256 "[""INTERCHROMOSOMAL[chr7--chr9]""]" chr7:90354549-chr9:3293258 False 0 Read count too low: 1 < 5 FAIL 1
GTF3C5--SLC35E3 1 0 0.33 0.0 INCL_NON_REF_SPLICE GTF3C5^ENSG00000148308.18 chr9:133031164:+ SLC35E3^ENSG00000175782.11 chr12:68783910:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2193:20335:6100 . NO_LDAS 0.0034 GT 1.8323 AG 1.8892 "[""INTERCHROMOSOMAL[chr9--chr12]""]" chr9:133031164-chr12:68783910 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GTF3C5--NAV2 1 0 0.33 0.0 ONLY_REF_SPLICE GTF3C5^ENSG00000148308.18 chr9:133031164:+ NAV2^ENSG00000166833.22 chr11:19832484:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2193:20335:6100 . NO_LDAS 0.0034 GT 1.8323 AG 1.9656 "[""INTERCHROMOSOMAL[chr9--chr11]""]" chr9:133031164-chr11:19832484 False 0 Read count too low: 1 < 5 FAIL 1
GTF3C5--NAPA 1 0 0.33 0.0 INCL_NON_REF_SPLICE GTF3C5^ENSG00000148308.18 chr9:133031164:+ NAPA^ENSG00000105402.8 chr19:47495564:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2193:20335:6100 . NO_LDAS 0.0034 GT 1.8323 AG 1.8892 "[""INTERCHROMOSOMAL[chr9--chr19]""]" chr9:133031164-chr19:47495564 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GTF3C3--YJU2 1 0 1.0 0.0 ONLY_REF_SPLICE GTF3C3^ENSG00000119041.11 chr2:196789204:- YJU2^ENSG00000105248.16 chr19:4261994:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2357:41377:17717 . YES_LDAS 0.0102 GT 1.7465 AG 1.8295 "[""INTERCHROMOSOMAL[chr2--chr19]""]" chr2:196789204-chr19:4261994 False 0 Read count too low: 1 < 5 FAIL 1
GTF3C1--PLXNA4 1 0 1.0 0.0 INCL_NON_REF_SPLICE GTF3C1^ENSG00000077235.18 chr16:27460665:- PLXNA4^ENSG00000221866.9 chr7:132241158:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1309:10263:8300 . NO_LDAS 0.0102 GT 0.9056 AG 1.9329 "[""INTERCHROMOSOMAL[chr16--chr7]""]" chr16:27460665-chr7:132241158 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GTF2IP9--AC008267.2 1 0 1.0 0.0 INCL_NON_REF_SPLICE GTF2IP9^ENSG00000251451.1 chr7:66407290:- AC008267.2^ENSG00000230189.7 chr7:66450236:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1362:27883:1434 . YES_LDAS 0.0102 GT 1.8892 AG 1.8062 "[""INTRACHROMOSOMAL[chr7:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[18710]""]" chr7:66407290-chr7:66450236 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
GTF2I--IFI44L 1 0 0.33 0.0 ONLY_REF_SPLICE GTF2I^ENSG00000263001.7 chr7:74758000:+ IFI44L^ENSG00000137959.17 chr1:78635337:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2370:30747:25339 . YES_LDAS 0.0034 GT 1.9086 AG 1.6895 "[""INTERCHROMOSOMAL[chr7--chr1]""]" chr7:74758000-chr1:78635337 False 0 Read count too low: 1 < 5 FAIL 1
GTF2F2--MTRF1 1 0 1.0 0.0 ONLY_REF_SPLICE GTF2F2^ENSG00000188342.12 chr13:45151831:+ MTRF1^ENSG00000120662.16 chr13:41260915:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1483:3702:16750 . YES_LDAS 0.0102 GT 1.9899 AG 1.9329 "[""INTRACHROMOSOMAL[chr13:3.86Mb]""]" chr13:45151831-chr13:41260915 False 0 Read count too low: 1 < 5 FAIL 1
GTF2E2--SLC6A8 1 0 1.0 0.0 INCL_NON_REF_SPLICE GTF2E2^ENSG00000197265.9 chr8:30658137:- SLC6A8^ENSG00000130821.17 chrX:153688033:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1166:8257:16792 . NO_LDAS 0.0102 GT 1.2419 AG 0.9183 "[""INTERCHROMOSOMAL[chr8--chrX]""]" chr8:30658137-chrX:153688033 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GTF2B--SOAT1 1 0 1.0 0.0 ONLY_REF_SPLICE GTF2B^ENSG00000137947.12 chr1:88887261:- SOAT1^ENSG00000057252.13 chr1:179323437:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1103:22366:27806 . NO_LDAS 0.0102 GT 1.5628 AG 1.8892 "[""INTRACHROMOSOMAL[chr1:90.40Mb]""]" chr1:88887261-chr1:179323437 False 0 Read count too low: 1 < 5 FAIL 1
GTDC1--ORC4 1 0 1.0 0.0 ONLY_REF_SPLICE GTDC1^ENSG00000121964.14 chr2:144235676:- ORC4^ENSG00000115947.14 chr2:147975975:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1287:7925:18123 . YES_LDAS 0.0102 GT 1.9656 AG 1.4566 "[""INTRACHROMOSOMAL[chr2:3.60Mb]""]" chr2:144235676-chr2:147975975 False 0 Read count too low: 1 < 5 FAIL 1
GSTP1--TAS2R15P 1 0 0.5 0.0 INCL_NON_REF_SPLICE GSTP1^ENSG00000084207.18 chr11:67586211:+ TAS2R15P^ENSG00000212125.2 chr12:10965232:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2189:42097:11033 . NO_LDAS 0.0051 GT 1.8892 AG 1.8323 "[""INTERCHROMOSOMAL[chr11--chr12]""]" chr11:67586211-chr12:10965232 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GSTM1--TRIM22 1 0 0.33 0.0 INCL_NON_REF_SPLICE GSTM1^ENSG00000134184.13 chr1:109689251:+ TRIM22^ENSG00000132274.16 chr11:5698423:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1241:30642:8427 . YES_LDAS 0.0034 GT 1.6895 AG 1.7819 "[""INTERCHROMOSOMAL[chr1--chr11]""]" chr1:109689251-chr11:5698423 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GSAP--GTF2I 1 0 1.0 0.0 ONLY_REF_SPLICE GSAP^ENSG00000186088.16 chr7:77416213:- GTF2I^ENSG00000263001.7 chr7:74689124:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2385:32211:28408 . YES_LDAS 0.0102 GT 1.4566 AG 1.9329 "[""INTRACHROMOSOMAL[chr7:2.55Mb]""]" chr7:77416213-chr7:74689124 False 0 Read count too low: 1 < 5 FAIL 1
GRK2--DAP3 1 0 1.0 0.0 ONLY_REF_SPLICE GRK2^ENSG00000173020.11 chr11:67279900:+ DAP3^ENSG00000132676.16 chr1:155709033:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1332:28449:15531 . YES_LDAS 0.0102 GT 1.8062 AG 1.9086 "[""INTERCHROMOSOMAL[chr11--chr1]""]" chr11:67279900-chr1:155709033 False 0 Read count too low: 1 < 5 FAIL 1
GRB2--COPS3 1 0 1.0 0.0 ONLY_REF_SPLICE GRB2^ENSG00000177885.15 chr17:75321659:- COPS3^ENSG00000141030.13 chr17:17254945:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1148:42138:8188 . YES_LDAS 0.0102 GT 1.8256 AG 1.5301 "[""INTRACHROMOSOMAL[chr17:58.04Mb]""]" chr17:75321659-chr17:17254945 False 0 Read count too low: 1 < 5 FAIL 1
GPX1--NONO 1 0 1.0 0.0 INCL_NON_REF_SPLICE GPX1^ENSG00000233276.8 chr3:49357538:- NONO^ENSG00000147140.17 chrX:71298481:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1389:39775:14382 . YES_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chr3--chrX]""]" chr3:49357538-chrX:71298481 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GPR173--AGTPBP1 1 0 1.0 0.0 INCL_NON_REF_SPLICE GPR173^ENSG00000184194.6 chrX:53049082:+ AGTPBP1^ENSG00000135049.16 chr9:85741832:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1483:51142:7221 . NO_LDAS 0.0102 GT 0.5665 AG 1.6729 "[""INTERCHROMOSOMAL[chrX--chr9]""]" chrX:53049082-chr9:85741832 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GPHN--SOCS4 1 0 1.0 0.0 ONLY_REF_SPLICE GPHN^ENSG00000171723.16 chr14:66508591:+ SOCS4^ENSG00000180008.9 chr14:55042952:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2498:18143:14130 . YES_LDAS 0.0102 GT 1.9899 AG 1.8295 "[""INTRACHROMOSOMAL[chr14:11.46Mb]""]" chr14:66508591-chr14:55042952 False 0 Read count too low: 1 < 5 FAIL 1
GPC5--USP32 1 0 1.0 0.0 ONLY_REF_SPLICE GPC5^ENSG00000179399.15 chr13:91399209:+ USP32^ENSG00000170832.13 chr17:60345608:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1113:39597:29431 . YES_LDAS 0.0102 GT 1.8323 AG 1.9329 "[""INTERCHROMOSOMAL[chr13--chr17]""]" chr13:91399209-chr17:60345608 False 0 Read count too low: 1 < 5 FAIL 1
GPATCH3--DTX3 1 0 1.0 0.0 ONLY_REF_SPLICE GPATCH3^ENSG00000198746.13 chr1:26892411:- DTX3^ENSG00000178498.16 chr12:57609077:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2236:5102:6899 . YES_LDAS 0.0102 GT 1.8295 AG 1.9656 "[""INTERCHROMOSOMAL[chr1--chr12]""]" chr1:26892411-chr12:57609077 False 0 Read count too low: 1 < 5 FAIL 1
GPATCH2L--SAFB2 1 0 1.0 0.0 ONLY_REF_SPLICE GPATCH2L^ENSG00000089916.18 chr14:76195972:+ SAFB2^ENSG00000130254.12 chr19:5587399:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2432:34218:15208 . YES_LDAS 0.0102 GT 1.8892 AG 1.7465 "[""INTERCHROMOSOMAL[chr14--chr19]""]" chr14:76195972-chr19:5587399 False 0 Read count too low: 1 < 5 FAIL 1
GPALPP1--CHD7 1 0 1.0 0.0 ONLY_REF_SPLICE GPALPP1^ENSG00000133114.18 chr13:44989742:+ CHD7^ENSG00000171316.12 chr8:60800388:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1233:18110:10178 . YES_LDAS 0.0102 GT 1.7056 AG 1.8256 "[""INTERCHROMOSOMAL[chr13--chr8]""]" chr13:44989742-chr8:60800388 False 0 Read count too low: 1 < 5 FAIL 1
GOT1--CYFIP2 1 0 1.0 0.0 ONLY_REF_SPLICE GOT1^ENSG00000120053.12 chr10:99405756:- CYFIP2^ENSG00000055163.20 chr5:157307761:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2388:38416:17044 . YES_LDAS 0.0102 GT 1.9656 AG 1.6895 "[""INTERCHROMOSOMAL[chr10--chr5]""]" chr10:99405756-chr5:157307761 False 0 Read count too low: 1 < 5 FAIL 1
GON4L--ATP8A1 1 0 1.0 0.0 ONLY_REF_SPLICE GON4L^ENSG00000116580.19 chr1:155853276:- ATP8A1^ENSG00000124406.16 chr4:42524847:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2185:21112:17394 . YES_LDAS 0.0102 GT 1.5628 AG 1.8323 "[""INTERCHROMOSOMAL[chr1--chr4]""]" chr1:155853276-chr4:42524847 False 0 Read count too low: 1 < 5 FAIL 1
GOLGA8A--TEP1 1 0 0.5 0.0 INCL_NON_REF_SPLICE GOLGA8A^ENSG00000175265.17 chr15:34382861:- TEP1^ENSG00000129566.13 chr14:20390955:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1309:41507:12532 . NO_LDAS 0.0051 GC 1.3996 AG 1.9219 "[""INTERCHROMOSOMAL[chr15--chr14]""]" chr15:34382861-chr14:20390955 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GOLGA8A--DCUN1D4 1 0 0.5 0.0 ONLY_REF_SPLICE GOLGA8A^ENSG00000175265.17 chr15:34404917:- DCUN1D4^ENSG00000109184.15 chr4:51863437:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1277:15764:18305 . YES_LDAS 0.0051 GT 1.9656 AG 1.8892 "[""INTERCHROMOSOMAL[chr15--chr4]""]" chr15:34404917-chr4:51863437 False 0 Read count too low: 1 < 5 FAIL 1
GOLGA8A--AC023469.2 1 0 0.5 0.0 INCL_NON_REF_SPLICE GOLGA8A^ENSG00000175265.17 chr15:34381968:- AC023469.2^ENSG00000228064.1 chr2:151003330:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1418:3799:28576 . NO_LDAS 0.0051 GT 0.9968 AG 1.7465 "[""INTERCHROMOSOMAL[chr15--chr2]""]" chr15:34381968-chr2:151003330 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GNPTG--DCAKD 1 0 1.0 0.0 ONLY_REF_SPLICE GNPTG^ENSG00000090581.10 chr16:1352306:+ DCAKD^ENSG00000172992.12 chr17:45034999:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1284:18555:6128 . YES_LDAS 0.0102 GT 1.7819 AG 1.7819 "[""INTERCHROMOSOMAL[chr16--chr17]""]" chr16:1352306-chr17:45034999 False 0 Read count too low: 1 < 5 FAIL 1
GNG7--FBXO45 1 0 1.0 0.0 ONLY_REF_SPLICE GNG7^ENSG00000176533.13 chr19:2555149:- FBXO45^ENSG00000174013.8 chr3:196577453:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1355:11517:26586 . NO_LDAS 0.0102 GT 1.3753 AG 1.8892 "[""INTERCHROMOSOMAL[chr19--chr3]""]" chr19:2555149-chr3:196577453 False 0 Read count too low: 1 < 5 FAIL 1
GNE--GTF2I 1 0 0.5 0.0 ONLY_REF_SPLICE GNE^ENSG00000159921.20 chr9:36258321:- GTF2I^ENSG00000263001.7 chr7:74756820:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2212:3791:24050 . YES_LDAS 0.0051 GT 1.8256 AG 1.9329 "[""INTERCHROMOSOMAL[chr9--chr7]""]" chr9:36258321-chr7:74756820 False 0 Read count too low: 1 < 5 FAIL 1
GNB1L--STK35 1 0 1.0 0.0 ONLY_REF_SPLICE GNB1L^ENSG00000185838.14 chr22:19802001:- STK35^ENSG00000125834.13 chr20:2116666:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1421:49394:14340 . YES_LDAS 0.0102 GT 1.7819 AG 1.8323 "[""INTERCHROMOSOMAL[chr22--chr20]""]" chr22:19802001-chr20:2116666 False 0 Read count too low: 1 < 5 FAIL 1
GNAQ--CDC37 1 0 1.0 0.0 INCL_NON_REF_SPLICE GNAQ^ENSG00000156052.11 chr9:77718482:- CDC37^ENSG00000105401.9 chr19:10393130:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2151:36151:9870 . NO_LDAS 0.0102 GT 1.5656 AG 1.9219 "[""INTERCHROMOSOMAL[chr9--chr19]""]" chr9:77718482-chr19:10393130 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GNAI3--AC126323.1 1 0 0.5 0.0 INCL_NON_REF_SPLICE GNAI3^ENSG00000065135.12 chr1:109548838:+ AC126323.1^ENSG00000166104.15 chr15:62246572:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1124:18491:19524 . NO_LDAS 0.0051 GT 1.9329 AG 1.8892 "[""INTERCHROMOSOMAL[chr1--chr15]""]" chr1:109548838-chr15:62246572 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GNAI3--AC126323.1 1 0 0.5 0.0 INCL_NON_REF_SPLICE GNAI3^ENSG00000065135.12 chr1:109548838:+ AC126323.1^ENSG00000166104.15 chr15:62246254:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1124:18491:19524 . NO_LDAS 0.0051 GT 1.9329 AG 1.8892 "[""INTERCHROMOSOMAL[chr1--chr15]""]" chr1:109548838-chr15:62246254 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GMPPB--ZNF638 1 0 1.0 0.0 ONLY_REF_SPLICE GMPPB^ENSG00000173540.14 chr3:49721965:- ZNF638^ENSG00000075292.19 chr2:71396141:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2403:3289:13933 . YES_LDAS 0.0102 GT 1.6729 AG 1.7465 "[""INTERCHROMOSOMAL[chr3--chr2]""]" chr3:49721965-chr2:71396141 False 0 Read count too low: 1 < 5 FAIL 1
GMDS-DT--GMDS 1 0 1.0 0.0 ONLY_REF_SPLICE GMDS-DT^ENSG00000250903.9 chr6:2273417:+ GMDS^ENSG00000112699.11 chr6:1960966:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1182:23045:29011 . YES_LDAS 0.0102 GT 1.2729 AG 1.6895 "[""INTRACHROMOSOMAL[chr6:0.00Mb]"",""LOCAL_INVERSION:+:-:[113]""]" chr6:2273417-chr6:1960966 False 0 Read count too low: 1 < 5 FAIL 1
GMDS--OBI1 1 0 1.0 0.0 ONLY_REF_SPLICE GMDS^ENSG00000112699.11 chr6:2115771:- OBI1^ENSG00000152193.8 chr13:78617122:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1472:14559:20085 . YES_LDAS 0.0102 GT 1.7819 AG 1.7056 "[""INTERCHROMOSOMAL[chr6--chr13]""]" chr6:2115771-chr13:78617122 False 0 Read count too low: 1 < 5 FAIL 1
GLUD1--NUTM2A-AS1 1 0 0.5 0.0 ONLY_REF_SPLICE GLUD1^ENSG00000148672.9 chr10:87094325:- NUTM2A-AS1^ENSG00000223482.8 chr10:87203936:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1301:41312:27021 . YES_LDAS 0.0051 GT 1.7819 AG 1.9899 "[""INTRACHROMOSOMAL[chr10:0.11Mb]""]" chr10:87094325-chr10:87203936 False 0 Read count too low: 1 < 5 FAIL 1
GLRX--ARL1 1 0 0.5 0.0 INCL_NON_REF_SPLICE GLRX^ENSG00000173221.14 chr5:95814072:- ARL1^ENSG00000120805.14 chr12:101407349:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1478:18361:26278 . NO_LDAS 0.0051 GT 1.8256 AG 1.2729 "[""INTERCHROMOSOMAL[chr5--chr12]""]" chr5:95814072-chr12:101407349 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GLOD4--SF3B2 1 0 1.0 0.0 ONLY_REF_SPLICE GLOD4^ENSG00000167699.13 chr17:782166:- SF3B2^ENSG00000087365.16 chr11:66055076:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1213:6728:20785 . YES_LDAS 0.0102 GT 1.8295 AG 1.7968 "[""INTERCHROMOSOMAL[chr17--chr11]""]" chr17:782166-chr11:66055076 False 0 Read count too low: 1 < 5 FAIL 1
GIPR--ITFG2 1 0 1.0 0.0 INCL_NON_REF_SPLICE GIPR^ENSG00000010310.9 chr19:45681979:+ ITFG2^ENSG00000111203.13 chr12:2820014:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1257:11970:23728 . YES_LDAS 0.0102 GT 1.8062 AG 1.9899 "[""INTERCHROMOSOMAL[chr19--chr12]""]" chr19:45681979-chr12:2820014 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GIPR--AKT2 1 0 1.0 0.0 ONLY_REF_SPLICE GIPR^ENSG00000010310.9 chr19:45672954:+ AKT2^ENSG00000105221.18 chr19:40242687:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1143:30488:5526 . YES_LDAS 0.0102 GT 1.9656 AG 1.5546 "[""INTRACHROMOSOMAL[chr19:5.38Mb]""]" chr19:45672954-chr19:40242687 False 0 Read count too low: 1 < 5 FAIL 1
GHDC--R3HDM1 1 0 1.0 0.0 ONLY_REF_SPLICE GHDC^ENSG00000167925.16 chr17:42190185:- R3HDM1^ENSG00000048991.16 chr2:135710059:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2156:40374:25592 . NO_LDAS 0.0102 GT 1.6402 AG 1.6729 "[""INTERCHROMOSOMAL[chr17--chr2]""]" chr17:42190185-chr2:135710059 False 0 Read count too low: 1 < 5 FAIL 1
GFPT1--LRPPRC 1 0 1.0 0.0 ONLY_REF_SPLICE GFPT1^ENSG00000198380.13 chr2:69387065:- LRPPRC^ENSG00000138095.19 chr2:43982434:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1271:18491:18319 . YES_LDAS 0.0102 GT 1.9329 AG 1.9329 "[""INTRACHROMOSOMAL[chr2:25.32Mb]""]" chr2:69387065-chr2:43982434 False 0 Read count too low: 1 < 5 FAIL 1
GFM2--COL5A1 1 0 1.0 0.0 INCL_NON_REF_SPLICE GFM2^ENSG00000164347.18 chr5:74721603:- COL5A1^ENSG00000130635.16 chr9:134701171:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2282:38861:13247 . YES_LDAS 0.0102 GT 1.7465 AG 1.9656 "[""INTERCHROMOSOMAL[chr5--chr9]""]" chr5:74721603-chr9:134701171 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GET1--RTEL1 1 0 1.0 0.0 INCL_NON_REF_SPLICE GET1^ENSG00000182093.16 chr21:39391338:+ RTEL1^ENSG00000258366.9 chr20:63658417:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2465:31750:23882 . NO_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chr21--chr20]""]" chr21:39391338-chr20:63658417 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GEMIN6--CDKL4 1 0 1.0 0.0 ONLY_REF_SPLICE GEMIN6^ENSG00000152147.11 chr2:38779118:+ CDKL4^ENSG00000205111.8 chr2:39229588:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2103:28765:15769 . YES_LDAS 0.0102 GT 1.8295 AG 1.9656 "[""INTRACHROMOSOMAL[chr2:0.39Mb]""]" chr2:38779118-chr2:39229588 False 0 Read count too low: 1 < 5 FAIL 1
GDF7--PKD1P6 1 0 1.0 0.0 INCL_NON_REF_SPLICE GDF7^ENSG00000143869.7 chr2:20672988:+ PKD1P6^ENSG00000250251.6 chr16:15137391:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1160:36434:26446 . NO_LDAS 0.0102 GT 1.5546 AG 1.7465 "[""INTERCHROMOSOMAL[chr2--chr16]""]" chr2:20672988-chr16:15137391 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GCNT2--DARS1 1 0 1.0 0.0 ONLY_REF_SPLICE GCNT2^ENSG00000111846.19 chr6:10529836:+ DARS1^ENSG00000115866.11 chr2:135961498:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2448:25497:20169 . YES_LDAS 0.0102 GT 1.9656 AG 1.9899 "[""INTERCHROMOSOMAL[chr6--chr2]""]" chr6:10529836-chr2:135961498 False 0 Read count too low: 1 < 5 FAIL 1
GCN1--CLPTM1L 1 0 1.0 0.0 ONLY_REF_SPLICE GCN1^ENSG00000089154.11 chr12:120164336:- CLPTM1L^ENSG00000049656.14 chr5:1318453:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2333:14971:5134 . NO_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTERCHROMOSOMAL[chr12--chr5]""]" chr12:120164336-chr5:1318453 False 0 Read count too low: 1 < 5 FAIL 1
GCA--ZFP1 1 0 1.0 0.0 ONLY_REF_SPLICE GCA^ENSG00000115271.11 chr2:162319395:+ ZFP1^ENSG00000184517.12 chr16:75152909:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2451:20821:19216 . NO_LDAS 0.0102 GT 1.8892 AG 1.7968 "[""INTERCHROMOSOMAL[chr2--chr16]""]" chr2:162319395-chr16:75152909 False 0 Read count too low: 1 < 5 FAIL 1
GBGT1--SLC38A10 1 0 1.0 0.0 ONLY_REF_SPLICE GBGT1^ENSG00000148288.13 chr9:133155178:- SLC38A10^ENSG00000157637.13 chr17:81289808:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1217:26848:20295 . YES_LDAS 0.0102 GT 1.7968 AG 1.8256 "[""INTERCHROMOSOMAL[chr9--chr17]""]" chr9:133155178-chr17:81289808 False 0 Read count too low: 1 < 5 FAIL 1
GATD3A--SLC9A8 1 0 1.0 0.0 ONLY_REF_SPLICE GATD3A^ENSG00000160221.18 chr21:44140342:+ SLC9A8^ENSG00000197818.12 chr20:49855438:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1358:44832:8819 . YES_LDAS 0.0102 GT 1.7819 AG 1.4566 "[""INTERCHROMOSOMAL[chr21--chr20]""]" chr21:44140342-chr20:49855438 False 0 Read count too low: 1 < 5 FAIL 1
GATD3A--PGAP6 1 0 0.5 0.0 ONLY_REF_SPLICE GATD3A^ENSG00000160221.18 chr21:44140342:+ PGAP6^ENSG00000129925.11 chr16:377585:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1494:46086:20771 . YES_LDAS 0.0051 GT 1.7819 AG 1.8062 "[""INTERCHROMOSOMAL[chr21--chr16]""]" chr21:44140342-chr16:377585 False 0 Read count too low: 1 < 5 FAIL 1
GATAD2A--TMEM156 1 0 1.0 0.0 ONLY_REF_SPLICE GATAD2A^ENSG00000167491.17 chr19:19465614:+ TMEM156^ENSG00000121895.8 chr4:38971137:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1331:7059:22957 . NO_LDAS 0.0102 GT 1.7465 AG 1.5656 "[""INTERCHROMOSOMAL[chr19--chr4]""]" chr19:19465614-chr4:38971137 False 0 Read count too low: 1 < 5 FAIL 1
GATAD1--TAPBP 1 0 1.0 0.0 INCL_NON_REF_SPLICE GATAD1^ENSG00000157259.8 chr7:92456580:+ TAPBP^ENSG00000231925.12 chr6:33301294:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2110:11630:16750 . NO_LDAS 0.0102 GT 1.7232 AG 1.9899 "[""INTERCHROMOSOMAL[chr7--chr6]""]" chr7:92456580-chr6:33301294 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GART--RBSN 1 0 1.0 0.0 INCL_NON_REF_SPLICE GART^ENSG00000159131.17 chr21:33542881:- RBSN^ENSG00000131381.12 chr3:15073837:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1342:50737:9940 . NO_LDAS 0.0102 GT 1.8295 AG 1.8892 "[""INTERCHROMOSOMAL[chr21--chr3]""]" chr21:33542881-chr3:15073837 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GANC--TMED5 1 0 1.0 0.0 ONLY_REF_SPLICE GANC^ENSG00000214013.9 chr15:42330672:+ TMED5^ENSG00000117500.13 chr1:93160226:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2184:24534:27077 . NO_LDAS 0.0102 GT 1.8295 AG 1.8256 "[""INTERCHROMOSOMAL[chr15--chr1]""]" chr15:42330672-chr1:93160226 False 0 Read count too low: 1 < 5 FAIL 1
GADD45B--MACROH2A2 1 0 1.0 0.0 INCL_NON_REF_SPLICE GADD45B^ENSG00000099860.9 chr19:2476700:+ MACROH2A2^ENSG00000099284.15 chr10:70102252:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1356:42817:21752 . NO_LDAS 0.0102 GC 1.7819 AG 1.8892 "[""INTERCHROMOSOMAL[chr19--chr10]""]" chr19:2476700-chr10:70102252 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GABRA3--LRP10 1 0 1.0 0.0 INCL_NON_REF_SPLICE GABRA3^ENSG00000011677.13 chrX:152345581:- LRP10^ENSG00000197324.9 chr14:22875682:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1377:25197:19314 . NO_LDAS 0.0102 GT 1.8295 AG 1.9086 "[""INTERCHROMOSOMAL[chrX--chr14]""]" chrX:152345581-chr14:22875682 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
FYN--CHERP 1 0 1.0 0.0 INCL_NON_REF_SPLICE FYN^ENSG00000010810.17 chr6:111674579:- CHERP^ENSG00000085872.15 chr19:16528255:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1186:46514:25493 . YES_LDAS 0.0102 GT 1.8892 AG 1.9086 "[""INTERCHROMOSOMAL[chr6--chr19]""]" chr6:111674579-chr19:16528255 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
FXYD5--ANKRD36 1 0 1.0 0.0 ONLY_REF_SPLICE FXYD5^ENSG00000089327.15 chr19:35164245:+ ANKRD36^ENSG00000135976.20 chr2:97127067:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2380:51878:28198 . YES_LDAS 0.0102 GT 1.8295 AG 1.6402 "[""INTERCHROMOSOMAL[chr19--chr2]""]" chr19:35164245-chr2:97127067 False 0 Read count too low: 1 < 5 FAIL 1
FUBP3--PTBP3 1 0 1.0 0.0 ONLY_REF_SPLICE FUBP3^ENSG00000107164.16 chr9:130579764:+ PTBP3^ENSG00000119314.16 chr9:112276013:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2255:18175:12532 . YES_LDAS 0.0102 GT 1.7056 AG 1.8892 "[""INTRACHROMOSOMAL[chr9:18.25Mb]""]" chr9:130579764-chr9:112276013 False 0 Read count too low: 1 < 5 FAIL 1
FTO--GALK2 1 0 1.0 0.0 ONLY_REF_SPLICE FTO^ENSG00000140718.21 chr16:53704229:+ GALK2^ENSG00000156958.15 chr15:49201162:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2283:17593:25031 . NO_LDAS 0.0102 GT 1.7819 AG 1.8892 "[""INTERCHROMOSOMAL[chr16--chr15]""]" chr16:53704229-chr15:49201162 False 0 Read count too low: 1 < 5 FAIL 1
FSIP2-AS1--AC097500.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE FSIP2-AS1^ENSG00000231646.6 chr2:185788766:- AC097500.1^ENSG00000287129.1 chr2:185952902:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2379:22803:10066 . NO_LDAS 0.0102 GT 1.9899 AG 1.7465 "[""INTRACHROMOSOMAL[chr2:0.15Mb]""]" chr2:185788766-chr2:185952902 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
FSD1L--ANO6 1 0 1.0 0.0 ONLY_REF_SPLICE FSD1L^ENSG00000106701.13 chr9:105472005:+ ANO6^ENSG00000177119.17 chr12:45331295:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2252:14980:6325 . YES_LDAS 0.0102 GT 1.7465 AG 1.5301 "[""INTERCHROMOSOMAL[chr9--chr12]""]" chr9:105472005-chr12:45331295 False 0 Read count too low: 1 < 5 FAIL 1
FRY--FANCM 1 0 1.0 0.0 INCL_NON_REF_SPLICE FRY^ENSG00000073910.23 chr13:32179010:+ FANCM^ENSG00000187790.11 chr14:45137069:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1417:12561:21584 . YES_LDAS 0.0102 GT 1.8892 AG 1.9899 "[""INTERCHROMOSOMAL[chr13--chr14]""]" chr13:32179010-chr14:45137069 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
FRMD4A--RPS7 1 0 0.17 0.0 INCL_NON_REF_SPLICE FRMD4A^ENSG00000151474.23 chr10:13663453:- RPS7^ENSG00000171863.15 chr2:3580832:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2253:19267:6605 . NO_LDAS 0.0017 GT 1.6895 AG 1.8256 "[""INTERCHROMOSOMAL[chr10--chr2]""]" chr10:13663453-chr2:3580832 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
FRG1-DT--ZNF720 1 0 1.0 0.0 ONLY_REF_SPLICE FRG1-DT^ENSG00000245685.7 chr4:189939659:- ZNF720^ENSG00000197302.10 chr16:31753766:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1236:37923:15433 . YES_LDAS 0.0102 GT 1.9656 AG 1.6729 "[""INTERCHROMOSOMAL[chr4--chr16]""]" chr4:189939659-chr16:31753766 False 0 Read count too low: 1 < 5 FAIL 1
FRA10AC1--ZNF37A 1 0 1.0 0.0 ONLY_REF_SPLICE FRA10AC1^ENSG00000148690.12 chr10:93676653:- ZNF37A^ENSG00000075407.18 chr10:38117390:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1488:2683:25101 . YES_LDAS 0.0102 GT 1.7819 AG 1.3996 "[""INTRACHROMOSOMAL[chr10:55.52Mb]""]" chr10:93676653-chr10:38117390 False 0 Read count too low: 1 < 5 FAIL 1
FRA10AC1--PSMB1 1 0 1.0 0.0 ONLY_REF_SPLICE FRA10AC1^ENSG00000148690.12 chr10:93670770:- PSMB1^ENSG00000008018.9 chr6:170549113:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2252:48982:27553 . YES_LDAS 0.0102 GT 1.6049 AG 1.9086 "[""INTERCHROMOSOMAL[chr10--chr6]""]" chr10:93670770-chr6:170549113 False 0 Read count too low: 1 < 5 FAIL 1
FOXO1--SMCHD1 1 0 1.0 0.0 ONLY_REF_SPLICE FOXO1^ENSG00000150907.10 chr13:40665583:- SMCHD1^ENSG00000101596.16 chr18:2718315:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1137:27551:23784 . YES_LDAS 0.0102 GT 1.7232 AG 1.6402 "[""INTERCHROMOSOMAL[chr13--chr18]""]" chr13:40665583-chr18:2718315 False 0 Read count too low: 1 < 5 FAIL 1
FOXN2--FBXO11 1 0 1.0 0.0 ONLY_REF_SPLICE FOXN2^ENSG00000170802.16 chr2:48314814:+ FBXO11^ENSG00000138081.21 chr2:47839769:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1359:9033:14914 . NO_LDAS 0.0102 GT 1.7056 AG 1.9086 "[""INTRACHROMOSOMAL[chr2:0.41Mb]""]" chr2:48314814-chr2:47839769 False 0 Read count too low: 1 < 5 FAIL 1
FOXM1--IVD 1 0 1.0 0.0 INCL_NON_REF_SPLICE FOXM1^ENSG00000111206.13 chr12:2861379:- IVD^ENSG00000128928.10 chr15:40418130:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2315:41159:2345 . YES_LDAS 0.0102 GT 1.7465 AG 1.9656 "[""INTERCHROMOSOMAL[chr12--chr15]""]" chr12:2861379-chr15:40418130 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
FOCAD--MCOLN2 1 0 1.0 0.0 ONLY_REF_SPLICE FOCAD^ENSG00000188352.12 chr9:20933103:+ MCOLN2^ENSG00000153898.13 chr1:84931568:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1451:14017:11551 . YES_LDAS 0.0102 GT 1.8323 AG 1.8323 "[""INTERCHROMOSOMAL[chr9--chr1]""]" chr9:20933103-chr1:84931568 False 0 Read count too low: 1 < 5 FAIL 1
FNTB--RBM25 1 0 1.0 0.0 ONLY_REF_SPLICE FNTB^ENSG00000257365.8 chr14:65044443:+ RBM25^ENSG00000119707.14 chr14:73077369:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1173:31329:14746 . YES_LDAS 0.0102 GT 1.7465 AG 1.9086 "[""INTRACHROMOSOMAL[chr14:8.00Mb]""]" chr14:65044443-chr14:73077369 False 0 Read count too low: 1 < 5 FAIL 1
FNTB--LINC01069 1 0 1.0 0.0 INCL_NON_REF_SPLICE FNTB^ENSG00000257365.8 chr14:65053328:+ LINC01069^ENSG00000236133.2 chr13:77981823:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1222:39217:17899 . NO_LDAS 0.0102 GC 1.3383 AG 1.9329 "[""INTERCHROMOSOMAL[chr14--chr13]""]" chr14:65053328-chr13:77981823 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
FNDC3B--USP25 1 0 1.0 0.0 ONLY_REF_SPLICE FNDC3B^ENSG00000075420.13 chr3:172251541:+ USP25^ENSG00000155313.15 chr21:15762891:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1154:9276:7740 . YES_LDAS 0.0102 GT 1.9656 AG 1.9656 "[""INTERCHROMOSOMAL[chr3--chr21]""]" chr3:172251541-chr21:15762891 False 0 Read count too low: 1 < 5 FAIL 1
FNDC3B--PLD1 1 0 1.0 0.0 ONLY_REF_SPLICE FNDC3B^ENSG00000075420.13 chr3:172133546:+ PLD1^ENSG00000075651.16 chr3:171738082:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2459:20537:15194 . YES_LDAS 0.0102 GT 1.9656 AG 1.5628 "[""INTRACHROMOSOMAL[chr3:0.23Mb]""]" chr3:172133546-chr3:171738082 False 0 Read count too low: 1 < 5 FAIL 1
FNDC3B--NGLY1 1 0 1.0 0.0 ONLY_REF_SPLICE FNDC3B^ENSG00000075420.13 chr3:172133546:+ NGLY1^ENSG00000151092.18 chr3:25778688:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2127:38279:14480 . YES_LDAS 0.0102 GT 1.9656 AG 1.8295 "[""INTRACHROMOSOMAL[chr3:146.25Mb]""]" chr3:172133546-chr3:25778688 False 0 Read count too low: 1 < 5 FAIL 1
FNDC3B--CNOT1 1 0 1.0 0.0 ONLY_REF_SPLICE FNDC3B^ENSG00000075420.13 chr3:172112590:+ CNOT1^ENSG00000125107.19 chr16:58547682:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2110:13887:16764 . YES_LDAS 0.0102 GT 1.9329 AG 1.7819 "[""INTERCHROMOSOMAL[chr3--chr16]""]" chr3:172112590-chr16:58547682 False 0 Read count too low: 1 < 5 FAIL 1
FNBP4--EPPIN 1 0 1.0 0.0 INCL_NON_REF_SPLICE FNBP4^ENSG00000109920.13 chr11:47724022:- EPPIN^ENSG00000101448.14 chr20:45544630:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1365:37769:24246 . NO_LDAS 0.0102 GT 1.9086 AG 1.9086 "[""INTERCHROMOSOMAL[chr11--chr20]""]" chr11:47724022-chr20:45544630 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
FLVCR1--HARS1 1 0 1.0 0.0 ONLY_REF_SPLICE FLVCR1^ENSG00000162769.13 chr1:212859190:+ HARS1^ENSG00000170445.16 chr5:140683219:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1302:43877:3746 . YES_LDAS 0.0102 GT 1.9219 AG 1.8892 "[""INTERCHROMOSOMAL[chr1--chr5]""]" chr1:212859190-chr5:140683219 False 0 Read count too low: 1 < 5 FAIL 1
FLNB--RIOK3 1 0 1.0 0.0 ONLY_REF_SPLICE FLNB^ENSG00000136068.15 chr3:58134772:+ RIOK3^ENSG00000101782.15 chr18:23479317:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2130:2529:18810 . NO_LDAS 0.0102 GT 1.9656 AG 1.9086 "[""INTERCHROMOSOMAL[chr3--chr18]""]" chr3:58134772-chr18:23479317 False 0 Read count too low: 1 < 5 FAIL 1
FLI1--SSTR3 1 0 1.0 0.0 ONLY_REF_SPLICE FLI1^ENSG00000151702.17 chr11:128694276:+ SSTR3^ENSG00000278195.2 chr22:37207839:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2262:36758:12098 . YES_LDAS 0.0102 GT 1.9086 AG 1.9656 "[""INTERCHROMOSOMAL[chr11--chr22]""]" chr11:128694276-chr22:37207839 False 0 Read count too low: 1 < 5 FAIL 1
FKBP15--ARHGEF7 1 0 1.0 0.0 ONLY_REF_SPLICE FKBP15^ENSG00000119321.9 chr9:113206509:- ARHGEF7^ENSG00000102606.18 chr13:111283139:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2468:30164:8581 . YES_LDAS 0.0102 GT 1.5656 AG 1.2366 "[""INTERCHROMOSOMAL[chr9--chr13]""]" chr9:113206509-chr13:111283139 False 0 Read count too low: 1 < 5 FAIL 1
FILIP1--C2CD5 1 0 1.0 0.0 ONLY_REF_SPLICE FILIP1^ENSG00000118407.15 chr6:75493414:- C2CD5^ENSG00000111731.12 chr12:22506819:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1117:8961:10164 . YES_LDAS 0.0102 GT 1.8892 AG 1.5546 "[""INTERCHROMOSOMAL[chr6--chr12]""]" chr6:75493414-chr12:22506819 False 0 Read count too low: 1 < 5 FAIL 1
FHL3--CDC42 1 0 1.0 0.0 ONLY_REF_SPLICE FHL3^ENSG00000183386.10 chr1:37998974:- CDC42^ENSG00000070831.17 chr1:22078429:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2431:37146:5316 . YES_LDAS 0.0102 GT 1.9899 AG 1.8892 "[""INTRACHROMOSOMAL[chr1:15.90Mb]""]" chr1:37998974-chr1:22078429 False 0 Read count too low: 1 < 5 FAIL 1
FGR--POMGNT1 1 0 1.0 0.0 ONLY_REF_SPLICE FGR^ENSG00000000938.13 chr1:27623691:- POMGNT1^ENSG00000085998.14 chr1:46190517:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1279:30472:26096 . YES_LDAS 0.0102 GT 1.7968 AG 1.7968 "[""INTRACHROMOSOMAL[chr1:18.55Mb]""]" chr1:27623691-chr1:46190517 False 0 Read count too low: 1 < 5 FAIL 1
FGD2--C1orf109 1 0 1.0 0.0 INCL_NON_REF_SPLICE FGD2^ENSG00000146192.15 chr6:37008966:+ C1orf109^ENSG00000116922.14 chr1:37691547:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1401:19825:9393 . NO_LDAS 0.0102 GT 1.9329 AG 1.8323 "[""INTERCHROMOSOMAL[chr6--chr1]""]" chr6:37008966-chr1:37691547 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
FEZ2--CRIM1 1 0 1.0 0.0 ONLY_REF_SPLICE FEZ2^ENSG00000171055.15 chr2:36555683:- CRIM1^ENSG00000150938.10 chr2:36546984:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2143:35148:13933 . YES_LDAS 0.0102 GT 1.7056 AG 1.9656 "[""INTRACHROMOSOMAL[chr2:0.02Mb]"",""NEIGHBORS_OVERLAP:-:+:[19330]""]" chr2:36555683-chr2:36546984 False 0 Read count too low: 1 < 5 FAIL 1
FDPS--N4BP2L2 1 0 1.0 0.0 ONLY_REF_SPLICE FDPS^ENSG00000160752.15 chr1:155312395:+ N4BP2L2^ENSG00000244754.9 chr13:32521449:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1308:36798:8581 . YES_LDAS 0.0102 GT 1.6895 AG 1.6895 "[""INTERCHROMOSOMAL[chr1--chr13]""]" chr1:155312395-chr13:32521449 False 0 Read count too low: 1 < 5 FAIL 1
FDFT1--DNMT3A 1 0 1.0 0.0 ONLY_REF_SPLICE FDFT1^ENSG00000079459.13 chr8:11802931:+ DNMT3A^ENSG00000119772.17 chr2:25314161:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2160:41830:22761 . YES_LDAS 0.0102 GT 1.8256 AG 1.8892 "[""INTERCHROMOSOMAL[chr8--chr2]""]" chr8:11802931-chr2:25314161 False 0 Read count too low: 1 < 5 FAIL 1
FCRL5--EIF3C 1 0 1.0 0.0 INCL_NON_REF_SPLICE FCRL5^ENSG00000143297.19 chr1:157534614:- EIF3C^ENSG00000184110.15 chr16:28720915:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1204:21419:17422 . YES_LDAS 0.0102 GT 1.7465 AG 1.8892 "[""INTERCHROMOSOMAL[chr1--chr16]""]" chr1:157534614-chr16:28720915 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
FCHSD2--RWDD2B 1 0 1.0 0.0 ONLY_REF_SPLICE FCHSD2^ENSG00000137478.15 chr11:73140031:- RWDD2B^ENSG00000156253.7 chr21:29008621:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2378:22430:29095 . YES_LDAS 0.0102 GT 1.8256 AG 1.8062 "[""INTERCHROMOSOMAL[chr11--chr21]""]" chr11:73140031-chr21:29008621 False 0 Read count too low: 1 < 5 FAIL 1
FBXW9--PRKD2 1 0 1.0 0.0 ONLY_REF_SPLICE FBXW9^ENSG00000132004.13 chr19:12689083:- PRKD2^ENSG00000105287.13 chr19:46716535:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2129:21541:8721 . YES_LDAS 0.0102 GT 1.8295 AG 1.6049 "[""INTRACHROMOSOMAL[chr19:33.98Mb]""]" chr19:12689083-chr19:46716535 False 0 Read count too low: 1 < 5 FAIL 1
FBXW4--KDM6A 1 0 1.0 0.0 INCL_NON_REF_SPLICE FBXW4^ENSG00000107829.15 chr10:101667886:- KDM6A^ENSG00000147050.16 chrX:45079565:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2442:41134:8665 . NO_LDAS 0.0102 GT 1.8892 AG 1.9656 "[""INTERCHROMOSOMAL[chr10--chrX]""]" chr10:101667886-chrX:45079565 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
FBXW12--KIAA0586 1 0 1.0 0.0 ONLY_REF_SPLICE FBXW12^ENSG00000164049.14 chr3:48397382:+ KIAA0586^ENSG00000100578.18 chr14:58442706:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2410:29728:17212 . YES_LDAS 0.0102 GT 1.9329 AG 1.9086 "[""INTERCHROMOSOMAL[chr3--chr14]""]" chr3:48397382-chr14:58442706 False 0 Read count too low: 1 < 5 FAIL 1
FBXW11--ITPR3 1 0 1.0 0.0 ONLY_REF_SPLICE FBXW11^ENSG00000072803.18 chr5:172006458:- ITPR3^ENSG00000096433.11 chr6:33640484:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2317:22544:6171 . YES_LDAS 0.0102 GT 1.9656 AG 1.8295 "[""INTERCHROMOSOMAL[chr5--chr6]""]" chr5:172006458-chr6:33640484 False 0 Read count too low: 1 < 5 FAIL 1
FBXO31--PHKB 1 0 1.0 0.0 ONLY_REF_SPLICE FBXO31^ENSG00000103264.18 chr16:87383405:- PHKB^ENSG00000102893.16 chr16:47547433:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2441:17447:5778 . YES_LDAS 0.0102 GT 1.6729 AG 1.6729 "[""INTRACHROMOSOMAL[chr16:39.63Mb]""]" chr16:87383405-chr16:47547433 False 0 Read count too low: 1 < 5 FAIL 1
FBXO25--ERICH1 1 0 1.0 0.0 ONLY_REF_SPLICE FBXO25^ENSG00000147364.17 chr8:407066:+ ERICH1^ENSG00000104714.14 chr8:692612:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2280:30795:9393 . NO_LDAS 0.0102 GT 1.7056 AG 1.9899 "[""INTRACHROMOSOMAL[chr8:0.14Mb]""]" chr8:407066-chr8:692612 False 0 Read count too low: 1 < 5 FAIL 1
FBXO25--AC240565.1 1 0 0.17 0.0 ONLY_REF_SPLICE FBXO25^ENSG00000147364.17 chr8:435707:+ AC240565.1^ENSG00000280136.2 chr17:106864:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2381:10053:9590 . NO_LDAS 0.0017 GT 1.7819 AG 1.8892 "[""INTERCHROMOSOMAL[chr8--chr17]""]" chr8:435707-chr17:106864 False 0 Read count too low: 1 < 5 FAIL 1
FBXO22--MBLAC2 1 0 1.0 0.0 INCL_NON_REF_SPLICE FBXO22^ENSG00000167196.14 chr15:75904608:+ MBLAC2^ENSG00000176055.10 chr5:90473402:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2420:4034:2976 . YES_LDAS 0.0102 GT 1.8062 AG 1.9086 "[""INTERCHROMOSOMAL[chr15--chr5]""]" chr15:75904608-chr5:90473402 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
FBXL4--CEP85L 1 0 1.0 0.0 ONLY_REF_SPLICE FBXL4^ENSG00000112234.9 chr6:98947806:- CEP85L^ENSG00000111860.14 chr6:118523920:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1297:19688:4167 . YES_LDAS 0.0102 GT 1.6895 AG 1.8892 "[""INTRACHROMOSOMAL[chr6:19.51Mb]""]" chr6:98947806-chr6:118523920 False 0 Read count too low: 1 < 5 FAIL 1
FAXDC2--DENND5B 1 0 1.0 0.0 INCL_NON_REF_SPLICE FAXDC2^ENSG00000170271.11 chr5:154858717:- DENND5B^ENSG00000170456.16 chr12:31499671:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2242:22786:2163 . NO_LDAS 0.0102 GC 1.7968 AG 1.9219 "[""INTERCHROMOSOMAL[chr5--chr12]""]" chr5:154858717-chr12:31499671 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
FANCL--VRK2 1 0 1.0 0.0 ONLY_REF_SPLICE FANCL^ENSG00000115392.12 chr2:58198594:- VRK2^ENSG00000028116.18 chr2:58123101:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1152:20691:27904 . YES_LDAS 0.0102 GT 1.9219 AG 1.8295 "[""INTRACHROMOSOMAL[chr2:0.00Mb]"",""NEIGHBORS_OVERLAP:-:+:[677]""]" chr2:58198594-chr2:58123101 False 0 Read count too low: 1 < 5 FAIL 1
FAM53C--MTRES1 1 0 1.0 0.0 ONLY_REF_SPLICE FAM53C^ENSG00000120709.11 chr5:138338307:+ MTRES1^ENSG00000130349.10 chr6:107039749:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2217:10352:21598 . NO_LDAS 0.0102 GT 1.7465 AG 1.9656 "[""INTERCHROMOSOMAL[chr5--chr6]""]" chr5:138338307-chr6:107039749 False 0 Read count too low: 1 < 5 FAIL 1
FAM53C--HELLS 1 0 1.0 0.0 ONLY_REF_SPLICE FAM53C^ENSG00000120709.11 chr5:138341866:+ HELLS^ENSG00000119969.15 chr10:94588229:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1430:12221:3060 . YES_LDAS 0.0102 GT 1.8062 AG 1.5301 "[""INTERCHROMOSOMAL[chr5--chr10]""]" chr5:138341866-chr10:94588229 False 0 Read count too low: 1 < 5 FAIL 1
FAM32A--HSH2D 1 0 1.0 0.0 ONLY_REF_SPLICE FAM32A^ENSG00000105058.12 chr19:16185765:+ HSH2D^ENSG00000196684.12 chr19:16152552:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1469:35730:9449 . YES_LDAS 0.0102 GT 1.6895 AG 1.9329 "[""INTRACHROMOSOMAL[chr19:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[26805]""]" chr19:16185765-chr19:16152552 False 0 Read count too low: 1 < 5 FAIL 1
FAM228B--PAK1 1 0 1.0 0.0 ONLY_REF_SPLICE FAM228B^ENSG00000219626.9 chr2:24147086:+ PAK1^ENSG00000149269.10 chr11:77337423:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1167:4074:3046 . YES_LDAS 0.0102 GT 1.5219 AG 1.8256 "[""INTERCHROMOSOMAL[chr2--chr11]""]" chr2:24147086-chr11:77337423 False 0 Read count too low: 1 < 5 FAIL 1
FAM222B--SSH2 1 0 1.0 0.0 ONLY_REF_SPLICE FAM222B^ENSG00000173065.13 chr17:28842682:- SSH2^ENSG00000141298.19 chr17:29703062:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2409:46765:19342 . YES_LDAS 0.0102 GT 1.6729 AG 1.9899 "[""INTRACHROMOSOMAL[chr17:0.77Mb]""]" chr17:28842682-chr17:29703062 False 0 Read count too low: 1 < 5 FAIL 1
FAM207A--AP3B1 1 0 1.0 0.0 ONLY_REF_SPLICE FAM207A^ENSG00000160256.13 chr21:44943837:+ AP3B1^ENSG00000132842.14 chr5:78216237:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2296:50074:26867 . YES_LDAS 0.0102 GT 1.9899 AG 1.8323 "[""INTERCHROMOSOMAL[chr21--chr5]""]" chr21:44943837-chr5:78216237 False 0 Read count too low: 1 < 5 FAIL 1
FAM193A--OSBPL3 1 0 1.0 0.0 ONLY_REF_SPLICE FAM193A^ENSG00000125386.16 chr4:2537170:+ OSBPL3^ENSG00000070882.13 chr7:24892621:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1479:7569:16526 . NO_LDAS 0.0102 GT 1.9219 AG 1.6402 "[""INTERCHROMOSOMAL[chr4--chr7]""]" chr4:2537170-chr7:24892621 False 0 Read count too low: 1 < 5 FAIL 1
FAM172A--RASA1 1 0 1.0 0.0 ONLY_REF_SPLICE FAM172A^ENSG00000113391.19 chr5:93776159:- RASA1^ENSG00000145715.15 chr5:87346672:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1146:8071:12462 . YES_LDAS 0.0102 GT 1.8323 AG 1.9329 "[""INTRACHROMOSOMAL[chr5:6.23Mb]""]" chr5:93776159-chr5:87346672 False 0 Read count too low: 1 < 5 FAIL 1
FAM172A--FER 1 0 1.0 0.0 ONLY_REF_SPLICE FAM172A^ENSG00000113391.19 chr5:94050731:- FER^ENSG00000151422.13 chr5:108798124:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1468:7771:27413 . YES_LDAS 0.0102 GT 1.7968 AG 1.8062 "[""INTRACHROMOSOMAL[chr5:14.64Mb]""]" chr5:94050731-chr5:108798124 False 0 Read count too low: 1 < 5 FAIL 1
FAM160B1--DNM1L 1 0 1.0 0.0 ONLY_REF_SPLICE FAM160B1^ENSG00000151553.15 chr10:114847233:+ DNM1L^ENSG00000087470.19 chr12:32707367:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2415:51465:3971 . YES_LDAS 0.0102 GT 1.3996 AG 1.5329 "[""INTERCHROMOSOMAL[chr10--chr12]""]" chr10:114847233-chr12:32707367 False 0 Read count too low: 1 < 5 FAIL 1
FAM126A--SUV39H2 1 0 1.0 0.0 ONLY_REF_SPLICE FAM126A^ENSG00000122591.13 chr7:22976693:- SUV39H2^ENSG00000152455.16 chr10:14901133:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1432:13362:24765 . NO_LDAS 0.0102 GT 1.8062 AG 1.9329 "[""INTERCHROMOSOMAL[chr7--chr10]""]" chr7:22976693-chr10:14901133 False 0 Read count too low: 1 < 5 FAIL 1
FAM126A--C13orf46 1 0 1.0 0.0 INCL_NON_REF_SPLICE FAM126A^ENSG00000122591.13 chr7:22976210:- C13orf46^ENSG00000283199.3 chr13:113967384:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2444:8831:14368 . NO_LDAS 0.0102 GT 1.8323 AG 1.6895 "[""INTERCHROMOSOMAL[chr7--chr13]""]" chr7:22976210-chr13:113967384 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
FAM107B--APBB1IP 1 0 1.0 0.0 ONLY_REF_SPLICE FAM107B^ENSG00000065809.14 chr10:14604240:- APBB1IP^ENSG00000077420.16 chr10:26560105:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2431:38400:6395 . YES_LDAS 0.0102 GT 1.6895 AG 1.6895 "[""INTRACHROMOSOMAL[chr10:11.66Mb]""]" chr10:14604240-chr10:26560105 False 0 Read count too low: 1 < 5 FAIL 1
FAM107A--SNX8 1 0 1.0 0.0 INCL_NON_REF_SPLICE FAM107A^ENSG00000168309.18 chr3:58577549:- SNX8^ENSG00000106266.11 chr7:2257023:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2433:22163:3662 . NO_LDAS 0.0102 GT 1.9899 AG 1.9086 "[""INTERCHROMOSOMAL[chr3--chr7]""]" chr3:58577549-chr7:2257023 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
FAM104A--TNPO3 1 0 1.0 0.0 ONLY_REF_SPLICE FAM104A^ENSG00000133193.12 chr17:73227165:- TNPO3^ENSG00000064419.13 chr7:129018157:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1405:32624:12756 . YES_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTERCHROMOSOMAL[chr17--chr7]""]" chr17:73227165-chr7:129018157 False 0 Read count too low: 1 < 5 FAIL 1
FAM104A--RCL1 1 0 1.0 0.0 ONLY_REF_SPLICE FAM104A^ENSG00000133193.12 chr17:73232086:- RCL1^ENSG00000120158.12 chr9:4860125:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1367:9365:6493 . YES_LDAS 0.0102 GT 1.6402 AG 1.8062 "[""INTERCHROMOSOMAL[chr17--chr9]""]" chr17:73232086-chr9:4860125 False 0 Read count too low: 1 < 5 FAIL 1
FAF1--NRDC 1 0 1.0 0.0 ONLY_REF_SPLICE FAF1^ENSG00000185104.20 chr1:50857929:- NRDC^ENSG00000078618.22 chr1:51834170:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1287:49281:19104 . YES_LDAS 0.0102 GT 1.8256 AG 1.7819 "[""INTRACHROMOSOMAL[chr1:0.83Mb]""]" chr1:50857929-chr1:51834170 False 0 Read count too low: 1 < 5 FAIL 1
F13A1--EMB 1 0 0.5 0.0 ONLY_REF_SPLICE F13A1^ENSG00000124491.16 chr6:6318535:- EMB^ENSG00000170571.12 chr5:50411383:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1387:30723:15629 . NO_LDAS 0.0051 GT 1.9329 AG 1.9086 "[""INTERCHROMOSOMAL[chr6--chr5]""]" chr6:6318535-chr5:50411383 False 0 Read count too low: 1 < 5 FAIL 1
EZH2--ACAP2 1 0 1.0 0.0 ONLY_REF_SPLICE EZH2^ENSG00000106462.11 chr7:148832634:- ACAP2^ENSG00000114331.15 chr3:195285857:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2378:40091:20001 . YES_LDAS 0.0102 GT 1.9086 AG 1.9329 "[""INTERCHROMOSOMAL[chr7--chr3]""]" chr7:148832634-chr3:195285857 False 0 Read count too low: 1 < 5 FAIL 1
EXT1--RAD21 1 0 1.0 0.0 ONLY_REF_SPLICE EXT1^ENSG00000182197.12 chr8:118110085:- RAD21^ENSG00000164754.15 chr8:116866761:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1363:7383:1603 . NO_LDAS 0.0102 GT 1.8892 AG 1.1033 "[""INTRACHROMOSOMAL[chr8:0.92Mb]""]" chr8:118110085-chr8:116866761 False 0 Read count too low: 1 < 5 FAIL 1
EXOSC2--LINC00937 1 0 1.0 0.0 ONLY_REF_SPLICE EXOSC2^ENSG00000130713.16 chr9:130695593:+ LINC00937^ENSG00000226091.7 chr12:8370429:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1413:46272:23588 . NO_LDAS 0.0102 GT 1.9219 AG 1.7465 "[""INTERCHROMOSOMAL[chr9--chr12]""]" chr9:130695593-chr12:8370429 False 0 Read count too low: 1 < 5 FAIL 1
EXOC5--SIPA1L3 1 0 1.0 0.0 ONLY_REF_SPLICE EXOC5^ENSG00000070367.16 chr14:57268622:- SIPA1L3^ENSG00000105738.11 chr19:38088721:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1459:33376:16245 . YES_LDAS 0.0102 GT 1.9086 AG 1.8062 "[""INTERCHROMOSOMAL[chr14--chr19]""]" chr14:57268622-chr19:38088721 False 0 Read count too low: 1 < 5 FAIL 1
EXOC2--ZFAND3 1 0 1.0 0.0 ONLY_REF_SPLICE EXOC2^ENSG00000112685.14 chr6:576757:- ZFAND3^ENSG00000156639.12 chr6:38152235:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1164:8321:23882 . YES_LDAS 0.0102 GT 1.9329 AG 1.6402 "[""INTRACHROMOSOMAL[chr6:37.13Mb]""]" chr6:576757-chr6:38152235 False 0 Read count too low: 1 < 5 FAIL 1
ETV6--PPP6R3 1 0 1.0 0.0 ONLY_REF_SPLICE ETV6^ENSG00000139083.11 chr12:11752579:+ PPP6R3^ENSG00000110075.15 chr11:68609904:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1304:28312:7306 . YES_LDAS 0.0102 GT 1.7465 AG 1.7056 "[""INTERCHROMOSOMAL[chr12--chr11]""]" chr12:11752579-chr11:68609904 False 0 Read count too low: 1 < 5 FAIL 1
ETV6--CBFB 1 0 1.0 0.0 ONLY_REF_SPLICE ETV6^ENSG00000139083.11 chr12:11650160:+ CBFB^ENSG00000067955.15 chr16:67036639:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1378:11954:7278 . NO_LDAS 0.0102 GT 1.9329 AG 1.9329 "[""INTERCHROMOSOMAL[chr12--chr16]""]" chr12:11650160-chr16:67036639 False 0 Read count too low: 1 < 5 FAIL 1
ETS1--PARP14 1 0 1.0 0.0 INCL_NON_REF_SPLICE ETS1^ENSG00000134954.14 chr11:128460850:- PARP14^ENSG00000173193.15 chr3:122714311:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2103:13062:24106 . YES_LDAS 0.0102 GT 1.9656 AG 1.8892 "[""INTERCHROMOSOMAL[chr11--chr3]""]" chr11:128460850-chr3:122714311 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ETS1--FLI1 1 0 1.0 0.0 ONLY_REF_SPLICE ETS1^ENSG00000134954.14 chr11:128521913:- FLI1^ENSG00000151702.17 chr11:128758115:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1110:37267:2864 . YES_LDAS 0.0102 GT 1.3996 AG 1.7465 "[""DEEPEST2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr11:0.10Mb]"",""LOCAL_INVERSION:-:+:[98977]""]" chr11:128521913-chr11:128758115 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
ESYT2--C7orf50 1 0 1.0 0.0 ONLY_REF_SPLICE ESYT2^ENSG00000117868.17 chr7:158829089:- C7orf50^ENSG00000146540.15 chr7:1010143:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1311:32187:1518 . YES_LDAS 0.0102 GT 1.6895 AG 1.8892 "[""INTRACHROMOSOMAL[chr7:157.59Mb]""]" chr7:158829089-chr7:1010143 False 0 Read count too low: 1 < 5 FAIL 1
ESYT2--ARL5B 1 0 1.0 0.0 ONLY_REF_SPLICE ESYT2^ENSG00000117868.17 chr7:158829089:- ARL5B^ENSG00000165997.5 chr10:18666575:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1327:15918:27707 . YES_LDAS 0.0102 GT 1.6895 AG 1.5546 "[""INTERCHROMOSOMAL[chr7--chr10]""]" chr7:158829089-chr10:18666575 False 0 Read count too low: 1 < 5 FAIL 1
ESR1--IGF2R 1 0 1.0 0.0 ONLY_REF_SPLICE ESR1^ENSG00000091831.24 chr6:151702005:+ IGF2R^ENSG00000197081.16 chr6:160024572:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1330:43456:17226 . YES_LDAS 0.0102 GT 1.9656 AG 1.9086 "[""INTRACHROMOSOMAL[chr6:7.84Mb]""]" chr6:151702005-chr6:160024572 False 0 Read count too low: 1 < 5 FAIL 1
ESCO1--METTL3 1 0 1.0 0.0 ONLY_REF_SPLICE ESCO1^ENSG00000141446.11 chr18:21567980:- METTL3^ENSG00000165819.12 chr14:21503881:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1497:43440:13135 . YES_LDAS 0.0102 GT 1.7968 AG 1.9656 "[""INTERCHROMOSOMAL[chr18--chr14]""]" chr18:21567980-chr14:21503881 False 0 Read count too low: 1 < 5 FAIL 1
ESAM--PHF13 1 0 1.0 0.0 ONLY_REF_SPLICE ESAM^ENSG00000149564.12 chr11:124762085:- PHF13^ENSG00000116273.6 chr1:6616757:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2378:2108:28226 . YES_LDAS 0.0102 GT 1.7819 AG 1.8892 "[""INTERCHROMOSOMAL[chr11--chr1]""]" chr11:124762085-chr1:6616757 False 0 Read count too low: 1 < 5 FAIL 1
ERV3-1--FAM131A 1 0 1.0 0.0 INCL_NON_REF_SPLICE ERV3-1^ENSG00000213462.5 chr7:65006541:- FAM131A^ENSG00000175182.15 chr3:184345889:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1227:12180:4699 . NO_LDAS 0.0102 GT 1.8323 AG 1.8892 "[""INTERCHROMOSOMAL[chr7--chr3]""]" chr7:65006541-chr3:184345889 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ERP44--CMC1 1 0 1.0 0.0 ONLY_REF_SPLICE ERP44^ENSG00000023318.8 chr9:100098784:- CMC1^ENSG00000187118.14 chr3:28263291:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1118:6105:25227 . YES_LDAS 0.0102 GT 1.4295 AG 1.8323 "[""INTERCHROMOSOMAL[chr9--chr3]""]" chr9:100098784-chr3:28263291 False 0 Read count too low: 1 < 5 FAIL 1
ERO1A--AL442639.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE ERO1A^ENSG00000197930.13 chr14:52661293:- AL442639.1^ENSG00000279256.1 chr9:26642930:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1108:44459:12210 . NO_LDAS 0.0102 GT 1.7056 AG 1.6895 "[""INTERCHROMOSOMAL[chr14--chr9]""]" chr14:52661293-chr9:26642930 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ERN1--DROSHA 1 0 1.0 0.0 INCL_NON_REF_SPLICE ERN1^ENSG00000178607.17 chr17:64042610:- DROSHA^ENSG00000113360.17 chr5:31531525:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1363:51789:21206 . NO_LDAS 0.0102 GT 1.9329 AG 1.9656 "[""INTERCHROMOSOMAL[chr17--chr5]""]" chr17:64042610-chr5:31531525 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ERICH1--OMA1 1 0 1.0 0.0 INCL_NON_REF_SPLICE ERICH1^ENSG00000104714.14 chr8:668594:- OMA1^ENSG00000162600.12 chr1:58539306:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1419:2068:7221 . YES_LDAS 0.0102 GT 1.9899 AG 1.6729 "[""INTERCHROMOSOMAL[chr8--chr1]""]" chr8:668594-chr1:58539306 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ERICH1--FOCAD 1 0 1.0 0.0 INCL_NON_REF_SPLICE ERICH1^ENSG00000104714.14 chr8:667340:- FOCAD^ENSG00000188352.12 chr9:20781771:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1164:4341:19931 . YES_LDAS 0.0102 GT 1.7819 AG 1.7056 "[""INTERCHROMOSOMAL[chr8--chr9]""]" chr8:667340-chr9:20781771 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ERGIC2--HP1BP3 1 0 1.0 0.0 ONLY_REF_SPLICE ERGIC2^ENSG00000087502.18 chr12:29357623:- HP1BP3^ENSG00000127483.19 chr1:20773610:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1176:25116:11635 . NO_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chr12--chr1]""]" chr12:29357623-chr1:20773610 False 0 Read count too low: 1 < 5 FAIL 1
ERCC6L2--MTHFD1L 1 0 1.0 0.0 INCL_NON_REF_SPLICE ERCC6L2^ENSG00000182150.18 chr9:95876385:+ MTHFD1L^ENSG00000120254.16 chr6:150877638:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2222:10384:28184 . NO_LDAS 0.0102 GT 1.8323 AG 1.9656 "[""INTERCHROMOSOMAL[chr9--chr6]""]" chr9:95876385-chr6:150877638 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ERCC6L2--MFSD14B 1 0 1.0 0.0 ONLY_REF_SPLICE ERCC6L2^ENSG00000182150.18 chr9:96004701:+ MFSD14B^ENSG00000148110.16 chr9:94415158:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1227:49483:4853 . YES_LDAS 0.0102 GT 1.7465 AG 1.9899 "[""INTRACHROMOSOMAL[chr9:1.41Mb]""]" chr9:96004701-chr9:94415158 False 0 Read count too low: 1 < 5 FAIL 1
ERBIN--AP3B1 1 0 1.0 0.0 ONLY_REF_SPLICE ERBIN^ENSG00000112851.15 chr5:65926806:+ AP3B1^ENSG00000132842.14 chr5:78089499:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1174:51765:18165 . YES_LDAS 0.0102 GT 1.9086 AG 1.8256 "[""INTRACHROMOSOMAL[chr5:11.92Mb]""]" chr5:65926806-chr5:78089499 False 0 Read count too low: 1 < 5 FAIL 1
ERBB4--RCC1L 1 0 1.0 0.0 INCL_NON_REF_SPLICE ERBB4^ENSG00000178568.15 chr2:211379832:- RCC1L^ENSG00000274523.5 chr7:75064648:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2481:15214:19090 . NO_LDAS 0.0102 GT 1.8323 AG 1.9899 "[""INTERCHROMOSOMAL[chr2--chr7]""]" chr2:211379832-chr7:75064648 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
EPSTI1--DNAJC15 1 0 1.0 0.0 ONLY_REF_SPLICE EPSTI1^ENSG00000133106.15 chr13:42991978:- DNAJC15^ENSG00000120675.6 chr13:43107178:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2102:39832:20001 . YES_LDAS 0.0102 GT 1.3996 AG 1.9329 "[""DEEPEST2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr13:0.03Mb]"",""LOCAL_INVERSION:-:+:[30932]""]" chr13:42991978-chr13:43107178 False 0 Read count too low: 1 < 5 FAIL 1
EPS8--SMG6 1 0 1.0 0.0 INCL_NON_REF_SPLICE EPS8^ENSG00000151491.14 chr12:15662029:- SMG6^ENSG00000070366.14 chr17:2060193:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1204:30917:16750 . NO_LDAS 0.0102 GT 1.9656 AG 1.9329 "[""INTERCHROMOSOMAL[chr12--chr17]""]" chr12:15662029-chr17:2060193 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
EPS8--EIF4A1 1 0 1.0 0.0 ONLY_REF_SPLICE EPS8^ENSG00000151491.14 chr12:15682893:- EIF4A1^ENSG00000161960.16 chr17:7575119:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1249:28983:14774 . NO_LDAS 0.0102 GT 1.9086 AG 1.5058 "[""INTERCHROMOSOMAL[chr12--chr17]""]" chr12:15682893-chr17:7575119 False 0 Read count too low: 1 < 5 FAIL 1
EPS15L1--PSMD9 1 0 1.0 0.0 ONLY_REF_SPLICE EPS15L1^ENSG00000127527.14 chr19:16471913:- PSMD9^ENSG00000110801.14 chr12:121894739:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1157:18855:13345 . YES_LDAS 0.0102 GT 1.6049 AG 1.8323 "[""INTERCHROMOSOMAL[chr19--chr12]""]" chr19:16471913-chr12:121894739 False 0 Read count too low: 1 < 5 FAIL 1
EPHA10--SFI1 1 0 0.5 0.0 INCL_NON_REF_SPLICE EPHA10^ENSG00000183317.17 chr1:37716906:- SFI1^ENSG00000198089.16 chr22:31611289:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2195:31564:9183 . NO_LDAS 0.0051 GT 1.7819 AG 1.7465 "[""INTERCHROMOSOMAL[chr1--chr22]""]" chr1:37716906-chr22:31611289 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
EPG5--AC023421.2 1 0 1.0 0.0 ONLY_REF_SPLICE EPG5^ENSG00000152223.15 chr18:45857853:- AC023421.2^ENSG00000288545.1 chr18:45737594:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1201:26888:17703 . YES_LDAS 0.0102 GT 1.9656 AG 1.7465 "[""INTRACHROMOSOMAL[chr18:0.10Mb]""]" chr18:45857853-chr18:45737594 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
EPB41L2--ARHGAP15 1 0 1.0 0.0 ONLY_REF_SPLICE EPB41L2^ENSG00000079819.19 chr6:131063142:- ARHGAP15^ENSG00000075884.14 chr2:143519266:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2288:36240:7081 . YES_LDAS 0.0102 GT 1.7232 AG 1.7968 "[""INTERCHROMOSOMAL[chr6--chr2]""]" chr6:131063142-chr2:143519266 False 0 Read count too low: 1 < 5 FAIL 1
ENOSF1--EHMT1 1 0 1.0 0.0 ONLY_REF_SPLICE ENOSF1^ENSG00000132199.20 chr18:712504:- EHMT1^ENSG00000181090.21 chr9:137716626:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2305:6631:26699 . YES_LDAS 0.0102 GT 1.6895 AG 1.9899 "[""INTERCHROMOSOMAL[chr18--chr9]""]" chr18:712504-chr9:137716626 False 0 Read count too low: 1 < 5 FAIL 1
EMX1--HLX 1 0 1.0 0.0 ONLY_REF_SPLICE EMX1^ENSG00000135638.14 chr2:72924493:+ HLX^ENSG00000136630.13 chr1:220884195:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1318:34557:8034 . NO_LDAS 0.0102 GT 1.8892 AG 1.6895 "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr2--chr1]""]" chr2:72924493-chr1:220884195 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
EMC7--C10orf62 1 0 1.0 0.0 INCL_NON_REF_SPLICE EMC7^ENSG00000134153.10 chr15:34101604:- C10orf62^ENSG00000203942.5 chr10:97590859:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1467:11525:5806 . NO_LDAS 0.0102 GT 1.8892 AG 1.6895 "[""INTERCHROMOSOMAL[chr15--chr10]""]" chr15:34101604-chr10:97590859 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
EMC3-AS1--DSG3 1 0 1.0 0.0 INCL_NON_REF_SPLICE EMC3-AS1^ENSG00000180385.8 chr3:10003744:+ DSG3^ENSG00000134757.5 chr18:31476051:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1375:39039:7137 . NO_LDAS 0.0102 AT 1.6402 AC 1.8256 "[""INTERCHROMOSOMAL[chr3--chr18]""]" chr3:10003744-chr18:31476051 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
EMC3-AS1--AC013477.1 1 0 0.5 0.0 ONLY_REF_SPLICE EMC3-AS1^ENSG00000180385.8 chr3:9988747:+ AC013477.1^ENSG00000288637.1 chr4:153394262:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1101:28757:9029 . NO_LDAS 0.0051 GT 1.9219 AG 1.7819 "[""INTERCHROMOSOMAL[chr3--chr4]""]" chr3:9988747-chr4:153394262 False 0 Read count too low: 1 < 5 FAIL 1
ELOB--ARPC4 1 0 1.0 0.0 ONLY_REF_SPLICE ELOB^ENSG00000103363.15 chr16:2777237:- ARPC4^ENSG00000241553.13 chr3:9797659:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2287:22794:12546 . NO_LDAS 0.0102 GT 1.7819 AG 1.7232 "[""INTERCHROMOSOMAL[chr16--chr3]""]" chr16:2777237-chr3:9797659 False 0 Read count too low: 1 < 5 FAIL 1
ELMO1--AOAH 1 0 1.0 0.0 ONLY_REF_SPLICE ELMO1^ENSG00000155849.16 chr7:36861659:- AOAH^ENSG00000136250.12 chr7:36686794:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1354:6671:8048 . YES_LDAS 0.0102 GT 1.9329 AG 1.231 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr7:0.13Mb]""]" chr7:36861659-chr7:36686794 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
ELK3--SLC41A2 1 0 1.0 0.0 INCL_NON_REF_SPLICE ELK3^ENSG00000111145.8 chr12:96247674:+ SLC41A2^ENSG00000136052.9 chr12:104931667:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2402:31095:10388 . NO_LDAS 0.0102 GC 1.9219 AG 1.8295 "[""INTRACHROMOSOMAL[chr12:8.53Mb]""]" chr12:96247674-chr12:104931667 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ELK3--ANKLE2 1 0 1.0 0.0 ONLY_REF_SPLICE ELK3^ENSG00000111145.8 chr12:96194705:+ ANKLE2^ENSG00000176915.15 chr12:132755133:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2318:35124:28828 . YES_LDAS 0.0102 GT 1.7232 AG 1.7819 "[""INTRACHROMOSOMAL[chr12:36.46Mb]""]" chr12:96194705-chr12:132755133 False 0 Read count too low: 1 < 5 FAIL 1
ELAC2--MX2 1 0 1.0 0.0 INCL_NON_REF_SPLICE ELAC2^ENSG00000006744.19 chr17:12995940:- MX2^ENSG00000183486.14 chr21:41406874:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1330:29598:14017 . YES_LDAS 0.0102 GT 1.9329 AG 1.8323 "[""INTERCHROMOSOMAL[chr17--chr21]""]" chr17:12995940-chr21:41406874 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
EIF4G1--RPTN 1 0 1.0 0.0 INCL_NON_REF_SPLICE EIF4G1^ENSG00000114867.22 chr3:184324347:+ RPTN^ENSG00000215853.3 chr1:152156733:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2150:51336:10164 . NO_LDAS 0.0102 GT 1.9656 AG 1.5219 "[""INTERCHROMOSOMAL[chr3--chr1]""]" chr3:184324347-chr1:152156733 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
EIF4EBP1--EIF4EBP1P1 1 0 1.0 0.0 INCL_NON_REF_SPLICE EIF4EBP1^ENSG00000187840.5 chr8:38030718:+ EIF4EBP1P1^ENSG00000258870.1 chr14:21419752:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1421:42486:9043 . NO_LDAS 0.0102 GT 1.5058 AG 1.9899 "[""INTERCHROMOSOMAL[chr8--chr14]""]" chr8:38030718-chr14:21419752 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
EIF4A2--LINC00888 1 0 1.0 0.0 INCL_NON_REF_SPLICE EIF4A2^ENSG00000156976.17 chr3:186786273:+ LINC00888^ENSG00000240024.5 chr3:183452376:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2283:37049:25101 . NO_LDAS 0.0102 GT 1.8295 AG 1.5546 "[""INTRACHROMOSOMAL[chr3:3.33Mb]""]" chr3:186786273-chr3:183452376 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
EIF4A1--NME2 1 0 1.0 0.0 ONLY_REF_SPLICE EIF4A1^ENSG00000161960.16 chr17:7572864:+ NME2^ENSG00000243678.12 chr17:51166827:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1167:15505:2051 . YES_LDAS 0.0102 GT 1.9086 AG 1.8892 "[""INTRACHROMOSOMAL[chr17:43.59Mb]""]" chr17:7572864-chr17:51166827 False 0 Read count too low: 1 < 5 FAIL 1
EIF2AK1--WDR37 1 0 1.0 0.0 ONLY_REF_SPLICE EIF2AK1^ENSG00000086232.13 chr7:6054546:- WDR37^ENSG00000047056.16 chr10:1080011:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2219:6598:10528 . YES_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTERCHROMOSOMAL[chr7--chr10]""]" chr7:6054546-chr10:1080011 False 0 Read count too low: 1 < 5 FAIL 1
EIF1B-AS1--MSI2 1 0 1.0 0.0 ONLY_REF_SPLICE EIF1B-AS1^ENSG00000280739.3 chr3:40301237:- MSI2^ENSG00000153944.12 chr17:57401379:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2349:3354:7320 . YES_LDAS 0.0102 GT 1.9899 AG 1.8295 "[""INTERCHROMOSOMAL[chr3--chr17]""]" chr3:40301237-chr17:57401379 False 0 Read count too low: 1 < 5 FAIL 1
EHMT2--MAN2C1 1 0 1.0 0.0 ONLY_REF_SPLICE EHMT2^ENSG00000204371.11 chr6:31886581:- MAN2C1^ENSG00000140400.17 chr15:75356902:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2327:41134:5022 . NO_LDAS 0.0102 GT 1.8062 AG 1.7819 "[""INTERCHROMOSOMAL[chr6--chr15]""]" chr6:31886581-chr15:75356902 False 0 Read count too low: 1 < 5 FAIL 1
EHMT1--SKP1 1 0 1.0 0.0 ONLY_REF_SPLICE EHMT1^ENSG00000181090.21 chr9:137619049:+ SKP1^ENSG00000113558.19 chr5:134174022:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2181:36742:1112 . YES_LDAS 0.0102 GT 1.7056 AG 1.9086 "[""INTERCHROMOSOMAL[chr9--chr5]""]" chr9:137619049-chr5:134174022 False 0 Read count too low: 1 < 5 FAIL 1
EHMT1--DENND1A 1 0 1.0 0.0 ONLY_REF_SPLICE EHMT1^ENSG00000181090.21 chr9:137744090:+ DENND1A^ENSG00000119522.16 chr9:123879021:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1347:27568:1504 . YES_LDAS 0.0102 GT 1.8256 AG 1.8062 "[""INTRACHROMOSOMAL[chr9:13.69Mb]""]" chr9:137744090-chr9:123879021 False 0 Read count too low: 1 < 5 FAIL 1
EHBP1--TBC1D22A 1 0 1.0 0.0 ONLY_REF_SPLICE EHBP1^ENSG00000115504.15 chr2:63038816:+ TBC1D22A^ENSG00000054611.14 chr22:46912074:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2240:52048:17983 . YES_LDAS 0.0102 GT 1.9899 AG 1.7819 "[""INTERCHROMOSOMAL[chr2--chr22]""]" chr2:63038816-chr22:46912074 False 0 Read count too low: 1 < 5 FAIL 1
EGLN2--IKZF3 1 0 1.0 0.0 INCL_NON_REF_SPLICE EGLN2^ENSG00000269858.6 chr19:40801278:+ IKZF3^ENSG00000161405.17 chr17:39760952:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1240:9931:3214 . YES_LDAS 0.0102 GT 1.6402 AG 1.9899 "[""INTERCHROMOSOMAL[chr19--chr17]""]" chr19:40801278-chr17:39760952 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
EFL1--AC243562.2 1 0 0.17 0.0 INCL_NON_REF_SPLICE EFL1^ENSG00000140598.15 chr15:82214717:- AC243562.2^ENSG00000259683.1 chr15:84389732:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2118:19785:23083 . YES_LDAS 0.0017 GT 1.9086 AG 1.5058 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr15:2.13Mb]""]" chr15:82214717-chr15:84389732 False 0 Excluded annotation pattern: GTEx_recurrent_StarF2019 FAIL 1
EEFSEC--TERT 1 0 1.0 0.0 INCL_NON_REF_SPLICE EEFSEC^ENSG00000132394.11 chr3:128153716:+ TERT^ENSG00000164362.21 chr5:1295050:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1404:9025:2317 . NO_LDAS 0.0102 GT 1.8256 AG 1.9329 "[""INTERCHROMOSOMAL[chr3--chr5]""]" chr3:128153716-chr5:1295050 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
EEF2--MAN2C1 1 0 1.0 0.0 ONLY_REF_SPLICE EEF2^ENSG00000167658.16 chr19:3979329:- MAN2C1^ENSG00000140400.17 chr15:75356902:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1480:36855:12910 . YES_LDAS 0.0102 GT 1.8892 AG 1.7819 "[""INTERCHROMOSOMAL[chr19--chr15]""]" chr19:3979329-chr15:75356902 False 0 Read count too low: 1 < 5 FAIL 1
EEF1D--IL36RN 1 0 1.0 0.0 INCL_NON_REF_SPLICE EEF1D^ENSG00000104529.17 chr8:143579763:- IL36RN^ENSG00000136695.15 chr2:113059213:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2327:46126:11958 . NO_LDAS 0.0102 GT 1.7819 AG 1.8062 "[""INTERCHROMOSOMAL[chr8--chr2]""]" chr8:143579763-chr2:113059213 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
EED--RNF145 1 0 1.0 0.0 ONLY_REF_SPLICE EED^ENSG00000074266.22 chr11:86266216:+ RNF145^ENSG00000145860.12 chr5:159203656:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1402:45091:13051 . YES_LDAS 0.0102 GT 1.4256 AG 1.9329 "[""INTERCHROMOSOMAL[chr11--chr5]""]" chr11:86266216-chr5:159203656 False 0 Read count too low: 1 < 5 FAIL 1
EDEM1--CHST12 1 0 1.0 0.0 INCL_NON_REF_SPLICE EDEM1^ENSG00000134109.11 chr3:5188314:+ CHST12^ENSG00000136213.10 chr7:2437804:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1165:38457:2709 . NO_LDAS 0.0102 GT 1.4295 AG 1.4566 "[""INTERCHROMOSOMAL[chr3--chr7]""]" chr3:5188314-chr7:2437804 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ECSIT--CASC11 1 0 1.0 0.0 INCL_NON_REF_SPLICE ECSIT^ENSG00000130159.14 chr19:11507457:- CASC11^ENSG00000249375.8 chr8:127716039:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1317:30253:25437 . NO_LDAS 0.0102 GT 1.8892 AG 1.9899 "[""INTERCHROMOSOMAL[chr19--chr8]""]" chr19:11507457-chr8:127716039 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
EBNA1BP2--ACOT9 1 0 1.0 0.0 ONLY_REF_SPLICE EBNA1BP2^ENSG00000117395.13 chr1:43211450:- ACOT9^ENSG00000123130.17 chrX:23706739:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1214:27956:22635 . NO_LDAS 0.0102 GT 1.9656 AG 1.5628 "[""INTERCHROMOSOMAL[chr1--chrX]""]" chr1:43211450-chrX:23706739 False 0 Read count too low: 1 < 5 FAIL 1
DYNLRB1--VCP 1 0 1.0 0.0 INCL_NON_REF_SPLICE DYNLRB1^ENSG00000125971.17 chr20:34540643:+ VCP^ENSG00000165280.18 chr9:35072612:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1236:15028:12126 . YES_LDAS 0.0102 GT 1.4295 AG 1.7819 "[""INTERCHROMOSOMAL[chr20--chr9]""]" chr20:34540643-chr9:35072612 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DUSP5--ZNF3 1 0 1.0 0.0 ONLY_REF_SPLICE DUSP5^ENSG00000138166.6 chr10:110502869:+ ZNF3^ENSG00000166526.18 chr7:100064912:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1325:11566:3494 . NO_LDAS 0.0102 GT 1.9656 AG 1.9899 "[""INTERCHROMOSOMAL[chr10--chr7]""]" chr10:110502869-chr7:100064912 False 0 Read count too low: 1 < 5 FAIL 1
DUSP4--XPOT 1 0 1.0 0.0 ONLY_REF_SPLICE DUSP4^ENSG00000120875.9 chr8:29349846:- XPOT^ENSG00000184575.12 chr12:64409962:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1116:4123:4699 . YES_LDAS 0.0102 GT 1.9656 AG 1.5329 "[""INTERCHROMOSOMAL[chr8--chr12]""]" chr8:29349846-chr12:64409962 False 0 Read count too low: 1 < 5 FAIL 1
DUSP10--MIA3 1 0 1.0 0.0 ONLY_REF_SPLICE DUSP10^ENSG00000143507.18 chr1:221738934:- MIA3^ENSG00000154305.18 chr1:222621159:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1184:11355:4503 . NO_LDAS 0.0102 GT 1.9086 AG 1.9656 "[""INTRACHROMOSOMAL[chr1:0.88Mb]""]" chr1:221738934-chr1:222621159 False 0 Read count too low: 1 < 5 FAIL 1
DTX2--GTF2I 1 0 0.33 0.0 ONLY_REF_SPLICE DTX2^ENSG00000091073.19 chr7:76463709:+ GTF2I^ENSG00000263001.7 chr7:74743449:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1266:19947:18740 . NO_LDAS 0.0034 GT 1.7465 AG 1.7465 "[""INTRACHROMOSOMAL[chr7:1.70Mb]""]" chr7:76463709-chr7:74743449 False 0 Read count too low: 1 < 5 FAIL 1
DOK3--ANKRD10 1 0 1.0 0.0 INCL_NON_REF_SPLICE DOK3^ENSG00000146094.16 chr5:177504743:- ANKRD10^ENSG00000088448.14 chr13:110883748:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1380:28142:9421 . YES_LDAS 0.0102 GT 1.9656 AG 1.8892 "[""INTERCHROMOSOMAL[chr5--chr13]""]" chr5:177504743-chr13:110883748 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DOCK4--PTPN22 1 0 1.0 0.0 ONLY_REF_SPLICE DOCK4^ENSG00000128512.23 chr7:111935540:- PTPN22^ENSG00000134242.16 chr1:113830029:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1466:28118:24232 . YES_LDAS 0.0102 GT 1.9656 AG 1.7465 "[""INTERCHROMOSOMAL[chr7--chr1]""]" chr7:111935540-chr1:113830029 False 0 Read count too low: 1 < 5 FAIL 1
DNPEP--RELA 1 0 1.0 0.0 INCL_NON_REF_SPLICE DNPEP^ENSG00000123992.20 chr2:219386066:- RELA^ENSG00000173039.19 chr11:65660184:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2383:50082:5750 . YES_LDAS 0.0102 GT 1.8892 AG 1.7465 "[""INTERCHROMOSOMAL[chr2--chr11]""]" chr2:219386066-chr11:65660184 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DNPEP--NDUFS7 1 0 1.0 0.0 ONLY_REF_SPLICE DNPEP^ENSG00000123992.20 chr2:219385424:- NDUFS7^ENSG00000115286.20 chr19:1390871:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1260:20165:27721 . YES_LDAS 0.0102 GT 1.7465 AG 1.8256 "[""INTERCHROMOSOMAL[chr2--chr19]""]" chr2:219385424-chr19:1390871 False 0 Read count too low: 1 < 5 FAIL 1
DNMT3A--NEK4 1 0 1.0 0.0 INCL_NON_REF_SPLICE DNMT3A^ENSG00000119772.17 chr2:25282441:- NEK4^ENSG00000114904.13 chr3:52739629:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1346:50462:9379 . YES_LDAS 0.0102 GT 1.7819 AG 1.7232 "[""INTERCHROMOSOMAL[chr2--chr3]""]" chr2:25282441-chr3:52739629 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DNMT1--ICAM3 1 0 1.0 0.0 ONLY_REF_SPLICE DNMT1^ENSG00000130816.17 chr19:10162667:- ICAM3^ENSG00000076662.10 chr19:10335976:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1359:14745:7123 . YES_LDAS 0.0102 GT 1.5628 AG 1.6895 "[""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr19:0.13Mb]""]" chr19:10162667-chr19:10335976 False 0 Read count too low: 1 < 5 FAIL 1
DNHD1--MYO19 1 0 1.0 0.0 INCL_NON_REF_SPLICE DNHD1^ENSG00000179532.13 chr11:6563672:+ MYO19^ENSG00000278259.5 chr17:36503200:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2104:50948:26082 . NO_LDAS 0.0102 GT 1.6402 AG 1.9656 "[""INTERCHROMOSOMAL[chr11--chr17]""]" chr11:6563672-chr17:36503200 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DNAJC5--GMEB2 1 0 1.0 0.0 ONLY_REF_SPLICE DNAJC5^ENSG00000101152.11 chr20:63895323:+ GMEB2^ENSG00000101216.11 chr20:63619454:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2228:47501:19664 . YES_LDAS 0.0102 GT 1.3383 AG 1.8892 "[""INTRACHROMOSOMAL[chr20:0.27Mb]""]" chr20:63895323-chr20:63619454 False 0 Read count too low: 1 < 5 FAIL 1
DNAJB6--RPL19 1 0 1.0 0.0 ONLY_REF_SPLICE DNAJB6^ENSG00000105993.15 chr7:157337144:+ RPL19^ENSG00000108298.12 chr17:39201213:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2317:9066:25395 . YES_LDAS 0.0102 GT 1.5058 AG 1.9656 "[""INTERCHROMOSOMAL[chr7--chr17]""]" chr7:157337144-chr17:39201213 False 0 Read count too low: 1 < 5 FAIL 1
DNAJB6--CLEC16A 1 0 1.0 0.0 ONLY_REF_SPLICE DNAJB6^ENSG00000105993.15 chr7:157410001:+ CLEC16A^ENSG00000038532.16 chr16:11020193:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1424:48731:10697 . YES_LDAS 0.0102 GT 1.8323 AG 1.7819 "[""INTERCHROMOSOMAL[chr7--chr16]""]" chr7:157410001-chr16:11020193 False 0 Read count too low: 1 < 5 FAIL 1
DNAJB11--ADAMTS12 1 0 1.0 0.0 INCL_NON_REF_SPLICE DNAJB11^ENSG00000090520.12 chr3:186585483:+ ADAMTS12^ENSG00000151388.11 chr5:33891769:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1193:15416:17170 . YES_LDAS 0.0102 GT 0.9183 AG 1.6402 "[""INTERCHROMOSOMAL[chr3--chr5]""]" chr3:186585483-chr5:33891769 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DNAJA2--NAIP 1 0 1.0 0.0 INCL_NON_REF_SPLICE DNAJA2^ENSG00000069345.12 chr16:46959003:- NAIP^ENSG00000249437.8 chr5:71012807:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1312:25399:2093 . NO_LDAS 0.0102 GT 1.9329 AG 1.5329 "[""INTERCHROMOSOMAL[chr16--chr5]""]" chr16:46959003-chr5:71012807 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DNAH5--DNAH8 1 0 1.0 0.0 ONLY_REF_SPLICE DNAH5^ENSG00000039139.10 chr5:13859452:- DNAH8^ENSG00000124721.18 chr6:38850251:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2110:20958:10066 . NO_LDAS 0.0102 GT 1.8256 AG 1.8892 "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr5--chr6]""]" chr5:13859452-chr6:38850251 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
DLG2--PGD 1 0 1.0 0.0 INCL_NON_REF_SPLICE DLG2^ENSG00000150672.18 chr11:83786592:- PGD^ENSG00000142657.21 chr1:10416987:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1432:10562:13331 . NO_LDAS 0.0102 GT 1.9899 AG 1.9086 "[""INTERCHROMOSOMAL[chr11--chr1]""]" chr11:83786592-chr1:10416987 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DISC1FP1--PAN3 1 0 1.0 0.0 ONLY_REF_SPLICE DISC1FP1^ENSG00000261645.7 chr11:90251317:+ PAN3^ENSG00000152520.14 chr13:28197185:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1453:39201:23672 . YES_LDAS 0.0102 GT 1.9656 AG 1.9329 "[""INTERCHROMOSOMAL[chr11--chr13]""]" chr11:90251317-chr13:28197185 False 0 Read count too low: 1 < 5 FAIL 1
DISC1--WDR5 1 0 1.0 0.0 ONLY_REF_SPLICE DISC1^ENSG00000162946.23 chr1:231626934:+ WDR5^ENSG00000196363.10 chr9:134151983:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2201:15813:12112 . YES_LDAS 0.0102 GT 1.7819 AG 1.9656 "[""INTERCHROMOSOMAL[chr1--chr9]""]" chr1:231626934-chr9:134151983 False 0 Read count too low: 1 < 5 FAIL 1
DIRC3--RPL29 1 0 1.0 0.0 INCL_NON_REF_SPLICE DIRC3^ENSG00000231672.8 chr2:217756584:- RPL29^ENSG00000162244.12 chr3:51993862:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1118:8540:7081 . NO_LDAS 0.0102 GT 1.5058 AG 1.5656 "[""INTERCHROMOSOMAL[chr2--chr3]""]" chr2:217756584-chr3:51993862 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DIPK1A--AP3B1 1 0 1.0 0.0 ONLY_REF_SPLICE DIPK1A^ENSG00000154511.12 chr1:92961376:- AP3B1^ENSG00000132842.14 chr5:78267595:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1192:21104:26460 . YES_LDAS 0.0102 GT 1.7465 AG 1.6729 "[""INTERCHROMOSOMAL[chr1--chr5]""]" chr1:92961376-chr5:78267595 False 0 Read count too low: 1 < 5 FAIL 1
DIP2A--DNA2 1 0 1.0 0.0 ONLY_REF_SPLICE DIP2A^ENSG00000160305.18 chr21:46459222:+ DNA2^ENSG00000138346.15 chr10:68470163:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1273:1267:5610 . YES_LDAS 0.0102 GT 1.8295 AG 1.7465 "[""INTERCHROMOSOMAL[chr21--chr10]""]" chr21:46459222-chr10:68470163 False 0 Read count too low: 1 < 5 FAIL 1
DHX37--RPLP0 1 0 0.5 0.0 ONLY_REF_SPLICE DHX37^ENSG00000150990.9 chr12:124966793:- RPLP0^ENSG00000089157.16 chr12:120197462:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2428:3168:6465 . YES_LDAS 0.0051 GT 1.6729 AG 1.9086 "[""INTRACHROMOSOMAL[chr12:4.75Mb]""]" chr12:124966793-chr12:120197462 False 0 Read count too low: 1 < 5 FAIL 1
DHRSX--AKAP17A 1 0 1.0 0.0 ONLY_REF_SPLICE DHRSX^ENSG00000169084.15 chrX:2266740:- AKAP17A^ENSG00000197976.12 chrX:1593444:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1339:42477:20435 . YES_LDAS 0.0102 GT 1.9899 AG 1.7819 "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chrY--chrX]""]" chrX:2266740-chrX:1593444 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
DHRS7--NCBP1 1 0 1.0 0.0 ONLY_REF_SPLICE DHRS7^ENSG00000100612.14 chr14:60149353:- NCBP1^ENSG00000136937.13 chr9:97653798:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2220:13855:17436 . YES_LDAS 0.0102 GT 1.5219 AG 1.9086 "[""INTERCHROMOSOMAL[chr14--chr9]""]" chr14:60149353-chr9:97653798 False 0 Read count too low: 1 < 5 FAIL 1
DHDDS--DDB2 1 0 1.0 0.0 ONLY_REF_SPLICE DHDDS^ENSG00000117682.17 chr1:26438284:+ DDB2^ENSG00000134574.12 chr11:47216336:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2327:3912:10893 . YES_LDAS 0.0102 GT 1.8892 AG 1.9656 "[""INTERCHROMOSOMAL[chr1--chr11]""]" chr1:26438284-chr11:47216336 False 0 Read count too low: 1 < 5 FAIL 1
DHCR7--GSK3A 1 0 1.0 0.0 INCL_NON_REF_SPLICE DHCR7^ENSG00000172893.16 chr11:71435579:- GSK3A^ENSG00000105723.13 chr19:42240097:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2202:36661:2513 . NO_LDAS 0.0102 GT 1.7465 AG 1.6402 "[""INTERCHROMOSOMAL[chr11--chr19]""]" chr11:71435579-chr19:42240097 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DGLUCY--KDM2A 1 0 1.0 0.0 ONLY_REF_SPLICE DGLUCY^ENSG00000133943.21 chr14:91167378:+ KDM2A^ENSG00000173120.15 chr11:67207510:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2327:32478:14214 . YES_LDAS 0.0102 GT 1.9656 AG 1.8295 "[""INTERCHROMOSOMAL[chr14--chr11]""]" chr14:91167378-chr11:67207510 False 0 Read count too low: 1 < 5 FAIL 1
DGKZ--DDB2 1 0 1.0 0.0 ONLY_REF_SPLICE DGKZ^ENSG00000149091.15 chr11:46370009:+ DDB2^ENSG00000134574.12 chr11:47237837:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1453:14518:4209 . YES_LDAS 0.0102 GT 1.8295 AG 1.8892 "[""INTRACHROMOSOMAL[chr11:0.83Mb]""]" chr11:46370009-chr11:47237837 False 0 Read count too low: 1 < 5 FAIL 1
DGKD--MTA3 1 0 1.0 0.0 ONLY_REF_SPLICE DGKD^ENSG00000077044.11 chr2:233390483:+ MTA3^ENSG00000057935.14 chr2:42682401:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1348:5579:22803 . YES_LDAS 0.0102 GT 1.8892 AG 1.9219 "[""INTRACHROMOSOMAL[chr2:190.60Mb]""]" chr2:233390483-chr2:42682401 False 0 Read count too low: 1 < 5 FAIL 1
DGKD--IL12RB1 1 0 1.0 0.0 ONLY_REF_SPLICE DGKD^ENSG00000077044.11 chr2:233468553:+ IL12RB1^ENSG00000096996.16 chr19:18069713:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1284:13904:2892 . YES_LDAS 0.0102 GT 1.8062 AG 1.9899 "[""INTERCHROMOSOMAL[chr2--chr19]""]" chr2:233468553-chr19:18069713 False 0 Read count too low: 1 < 5 FAIL 1
DENND5B--SINHCAF 1 0 1.0 0.0 ONLY_REF_SPLICE DENND5B^ENSG00000170456.16 chr12:31590706:- SINHCAF^ENSG00000139146.14 chr12:31305123:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1354:48472:15461 . YES_LDAS 0.0102 GT 1.7968 AG 1.9086 "[""INTRACHROMOSOMAL[chr12:0.06Mb]"",""NEIGHBORS[55168]""]" chr12:31590706-chr12:31305123 False 0 Read count too low: 1 < 5 FAIL 1
DENND5A--CSPG4 1 0 1.0 0.0 INCL_NON_REF_SPLICE DENND5A^ENSG00000184014.9 chr11:9171536:- CSPG4^ENSG00000173546.7 chr15:75689684:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2173:11663:12714 . YES_LDAS 0.0102 GT 1.5329 AG 1.9329 "[""INTERCHROMOSOMAL[chr11--chr15]""]" chr11:9171536-chr15:75689684 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DENND1C--AASDHPPT 1 0 1.0 0.0 INCL_NON_REF_SPLICE DENND1C^ENSG00000205744.10 chr19:6476899:- AASDHPPT^ENSG00000149313.11 chr11:106079624:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1328:50980:23756 . YES_LDAS 0.0102 GC 1.5656 AG 1.9656 "[""INTERCHROMOSOMAL[chr19--chr11]""]" chr19:6476899-chr11:106079624 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DENND1A--FAM126A 1 0 1.0 0.0 ONLY_REF_SPLICE DENND1A^ENSG00000119522.16 chr9:123792587:- FAM126A^ENSG00000122591.13 chr7:22991139:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2206:11290:13415 . YES_LDAS 0.0102 GT 1.9329 AG 1.585 "[""INTERCHROMOSOMAL[chr9--chr7]""]" chr9:123792587-chr7:22991139 False 0 Read count too low: 1 < 5 FAIL 1
DENND11--TBXAS1 1 0 1.0 0.0 ONLY_REF_SPLICE DENND11^ENSG00000257093.7 chr7:141701886:- TBXAS1^ENSG00000059377.18 chr7:139911225:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2216:33926:11257 . YES_LDAS 0.0102 GT 1.6402 AG 1.8892 "[""INTRACHROMOSOMAL[chr7:1.64Mb]""]" chr7:141701886-chr7:139911225 False 0 Read count too low: 1 < 5 FAIL 1
DDX55--SYK 1 0 0.5 0.0 ONLY_REF_SPLICE DDX55^ENSG00000111364.16 chr12:123610128:+ SYK^ENSG00000165025.15 chr9:90887749:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1298:35755:22131 . NO_LDAS 0.0051 GT 1.8295 AG 1.8062 "[""INTERCHROMOSOMAL[chr12--chr9]""]" chr12:123610128-chr9:90887749 False 0 Read count too low: 1 < 5 FAIL 1
DDX54--TPCN1 1 0 1.0 0.0 ONLY_REF_SPLICE DDX54^ENSG00000123064.13 chr12:113180929:- TPCN1^ENSG00000186815.13 chr12:113285889:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1368:32697:12574 . YES_LDAS 0.0102 GT 1.9329 AG 1.7968 "[""INTRACHROMOSOMAL[chr12:0.04Mb]"",""LOCAL_INVERSION:-:+:[35571]""]" chr12:113180929-chr12:113285889 False 0 Read count too low: 1 < 5 FAIL 1
DDX41--PDCD7 1 0 1.0 0.0 ONLY_REF_SPLICE DDX41^ENSG00000183258.12 chr5:177516725:- PDCD7^ENSG00000090470.15 chr15:65118840:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1341:41482:18599 . YES_LDAS 0.0102 GT 1.8323 AG 1.9329 "[""INTERCHROMOSOMAL[chr5--chr15]""]" chr5:177516725-chr15:65118840 False 0 Read count too low: 1 < 5 FAIL 1
DDX39B--GMEB1 1 0 0.5 0.0 INCL_NON_REF_SPLICE DDX39B^ENSG00000198563.14 chr6:31538763:- GMEB1^ENSG00000162419.13 chr1:28717179:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2465:43715:20589 . NO_LDAS 0.0051 GT 1.9656 AG 1.053 "[""INTERCHROMOSOMAL[chr6--chr1]""]" chr6:31538763-chr1:28717179 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DDX39B--AL360270.1 1 0 0.5 0.0 INCL_NON_REF_SPLICE DDX39B^ENSG00000198563.14 chr6:31538763:- AL360270.1^ENSG00000232811.1 chr1:110944890:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2465:43715:20589 . NO_LDAS 0.0051 GT 1.9656 AG 1.053 "[""INTERCHROMOSOMAL[chr6--chr1]""]" chr6:31538763-chr1:110944890 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DDX24--WEE1 1 0 0.33 0.0 INCL_NON_REF_SPLICE DDX24^ENSG00000089737.17 chr14:94079444:- WEE1^ENSG00000166483.12 chr11:9574039:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1373:48844:3018 . YES_LDAS 0.0034 GT 1.2366 AG 0.9968 "[""INTERCHROMOSOMAL[chr14--chr11]""]" chr14:94079444-chr11:9574039 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DDX24--C11orf95 1 0 0.33 0.0 INCL_NON_REF_SPLICE DDX24^ENSG00000089737.17 chr14:94079444:- C11orf95^ENSG00000188070.9 chr11:63765867:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1373:48844:3018 . YES_LDAS 0.0034 GT 1.2366 AG 0.9968 "[""INTERCHROMOSOMAL[chr14--chr11]""]" chr14:94079444-chr11:63765867 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DDX21--DDX50 1 0 1.0 0.0 ONLY_REF_SPLICE DDX21^ENSG00000165732.13 chr10:68977688:+ DDX50^ENSG00000107625.14 chr10:68914059:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2367:14518:2163 . NO_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr10:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[9323]""]" chr10:68977688-chr10:68914059 False 0 Excluded annotation pattern: DGD_PARALOGS FAIL 1
DDX21--DDX50 1 0 1.0 0.0 ONLY_REF_SPLICE DDX21^ENSG00000165732.13 chr10:68967203:+ DDX50^ENSG00000107625.14 chr10:68936936:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1351:47526:22425 . YES_LDAS 0.0102 GT 1.7968 AG 1.5656 "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr10:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[9323]""]" chr10:68967203-chr10:68936936 False 0 Excluded annotation pattern: DGD_PARALOGS FAIL 1
DDR2--RPA3 1 0 1.0 0.0 INCL_NON_REF_SPLICE DDR2^ENSG00000162733.19 chr1:162775725:+ RPA3^ENSG00000106399.11 chr7:7641083:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1176:42866:14662 . NO_LDAS 0.0102 GT 1.8295 AG 1.8892 "[""INTERCHROMOSOMAL[chr1--chr7]""]" chr1:162775725-chr7:7641083 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DDR2--EIF3F 1 0 1.0 0.0 INCL_NON_REF_SPLICE DDR2^ENSG00000162733.19 chr1:162761343:+ EIF3F^ENSG00000175390.15 chr11:7987405:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1274:41450:1560 . NO_LDAS 0.0102 GT 1.8323 AG 1.2729 "[""INTERCHROMOSOMAL[chr1--chr11]""]" chr1:162761343-chr11:7987405 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DDN-AS1--XPNPEP3 1 0 1.0 0.0 ONLY_REF_SPLICE DDN-AS1^ENSG00000257913.2 chr12:49009389:+ XPNPEP3^ENSG00000196236.13 chr22:40907587:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2102:19389:23938 . NO_LDAS 0.0102 GT 1.8892 AG 1.9329 "[""INTERCHROMOSOMAL[chr12--chr22]""]" chr12:49009389-chr22:40907587 False 0 Read count too low: 1 < 5 FAIL 1
DDI2--TTL 1 0 1.0 0.0 ONLY_REF_SPLICE DDI2^ENSG00000197312.12 chr1:15633565:+ TTL^ENSG00000114999.8 chr2:112502912:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1261:10773:6689 . YES_LDAS 0.0102 GT 1.3383 AG 1.8323 "[""INTERCHROMOSOMAL[chr1--chr2]""]" chr1:15633565-chr2:112502912 False 0 Read count too low: 1 < 5 FAIL 1
DDHD2--ATM 1 0 1.0 0.0 ONLY_REF_SPLICE DDHD2^ENSG00000085788.14 chr8:38237627:+ ATM^ENSG00000149311.19 chr11:108280995:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1198:11064:10276 . YES_LDAS 0.0102 GT 1.7465 AG 1.9899 "[""INTERCHROMOSOMAL[chr8--chr11]""]" chr8:38237627-chr11:108280995 False 0 Read count too low: 1 < 5 FAIL 1
DDB2--EIF3M 1 0 1.0 0.0 ONLY_REF_SPLICE DDB2^ENSG00000134574.12 chr11:47217049:+ EIF3M^ENSG00000149100.13 chr11:32587012:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1311:27996:26096 . YES_LDAS 0.0102 GT 1.9656 AG 1.8256 "[""INTRACHROMOSOMAL[chr11:14.61Mb]""]" chr11:47217049-chr11:32587012 False 0 Read count too low: 1 < 5 FAIL 1
DDB2--AC241585.1 1 0 0.5 0.0 INCL_NON_REF_SPLICE DDB2^ENSG00000134574.12 chr11:47216971:+ AC241585.1^ENSG00000223612.3 chr1:145233418:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2401:6477:21920 . NO_LDAS 0.0051 GT 1.4716 AG 1.6402 "[""INTERCHROMOSOMAL[chr11--chr1]""]" chr11:47216971-chr1:145233418 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DCTN4--EIF4G3 1 0 1.0 0.0 ONLY_REF_SPLICE DCTN4^ENSG00000132912.13 chr5:150753479:- EIF4G3^ENSG00000075151.22 chr1:21111383:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2269:8313:26811 . NO_LDAS 0.0102 GT 1.9219 AG 1.8323 "[""INTERCHROMOSOMAL[chr5--chr1]""]" chr5:150753479-chr1:21111383 False 0 Read count too low: 1 < 5 FAIL 1
DCTN3--ANKRD62 1 0 1.0 0.0 INCL_NON_REF_SPLICE DCTN3^ENSG00000137100.16 chr9:34616030:- ANKRD62^ENSG00000181626.12 chr18:12093981:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2490:41725:17899 . NO_LDAS 0.0102 GT 1.9656 AG 1.7465 "[""INTERCHROMOSOMAL[chr9--chr18]""]" chr9:34616030-chr18:12093981 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DCTN2--CLIP1 1 0 0.5 0.0 INCL_NON_REF_SPLICE DCTN2^ENSG00000175203.17 chr12:57546028:- CLIP1^ENSG00000130779.22 chr12:122327985:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2151:37842:5120 . NO_LDAS 0.0051 GT 1.8295 AG 1.7232 "[""INTRACHROMOSOMAL[chr12:64.72Mb]""]" chr12:57546028-chr12:122327985 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DCTN2--APOA4 1 0 0.5 0.0 INCL_NON_REF_SPLICE DCTN2^ENSG00000175203.17 chr12:57546028:- APOA4^ENSG00000110244.7 chr11:116821745:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2151:37842:5120 . NO_LDAS 0.0051 GT 1.8295 AG 1.7232 "[""INTERCHROMOSOMAL[chr12--chr11]""]" chr12:57546028-chr11:116821745 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DCTD--ARIH1 1 0 1.0 0.0 INCL_NON_REF_SPLICE DCTD^ENSG00000129187.15 chr4:182914923:- ARIH1^ENSG00000166233.15 chr15:72514294:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1427:11218:3816 . NO_LDAS 0.0102 GT 1.8323 AG 1.5301 "[""INTERCHROMOSOMAL[chr4--chr15]""]" chr4:182914923-chr15:72514294 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DCHS2--FBXW7 1 0 1.0 0.0 ONLY_REF_SPLICE DCHS2^ENSG00000197410.14 chr4:154297851:- FBXW7^ENSG00000109670.16 chr4:152337936:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1147:7334:14242 . YES_LDAS 0.0102 GT 1.7819 AG 1.8892 "[""INTRACHROMOSOMAL[chr4:1.70Mb]""]" chr4:154297851-chr4:152337936 False 0 Read count too low: 1 < 5 FAIL 1
DCAF7--Y_RNA 1 0 1.0 0.0 INCL_NON_REF_SPLICE DCAF7^ENSG00000136485.15 chr17:63593536:+ Y_RNA^ENSG00000207473.1 chr10:73347043:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1457:20020:2471 . NO_LDAS 0.0102 GT 1.8892 AG 1.7819 "[""INTERCHROMOSOMAL[chr17--chr6]""]" chr17:63593536-chr10:73347043 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DCAF1--SFMBT1 1 0 1.0 0.0 ONLY_REF_SPLICE DCAF1^ENSG00000145041.15 chr3:51412379:- SFMBT1^ENSG00000163935.14 chr3:53019122:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2343:14899:22663 . YES_LDAS 0.0102 GT 1.4295 AG 1.8892 "[""INTRACHROMOSOMAL[chr3:1.40Mb]""]" chr3:51412379-chr3:53019122 False 0 Read count too low: 1 < 5 FAIL 1
DBNL--ANAPC5 1 0 1.0 0.0 INCL_NON_REF_SPLICE DBNL^ENSG00000136279.21 chr7:44051946:+ ANAPC5^ENSG00000089053.13 chr12:121352198:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2331:44646:3340 . NO_LDAS 0.0102 GT 1.9656 AG 1.6895 "[""INTERCHROMOSOMAL[chr7--chr12]""]" chr7:44051946-chr12:121352198 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DARS2--TIMM9 1 0 1.0 0.0 INCL_NON_REF_SPLICE DARS2^ENSG00000117593.12 chr1:173833459:+ TIMM9^ENSG00000100575.14 chr14:58409053:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1181:21807:3298 . YES_LDAS 0.0102 AT 1.9086 AC 1.8295 "[""INTERCHROMOSOMAL[chr1--chr14]""]" chr1:173833459-chr14:58409053 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DARS1-AS1--SEC63 1 0 1.0 0.0 ONLY_REF_SPLICE DARS1-AS1^ENSG00000231890.8 chr2:136003367:+ SEC63^ENSG00000025796.14 chr6:107897731:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2143:32049:5120 . NO_LDAS 0.0102 GT 1.9329 AG 1.585 "[""INTERCHROMOSOMAL[chr2--chr6]""]" chr2:136003367-chr6:107897731 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
DAPK2--ZADH2 1 0 0.5 0.0 INCL_NON_REF_SPLICE DAPK2^ENSG00000035664.11 chr15:63983739:- ZADH2^ENSG00000180011.7 chr18:75202008:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2459:30181:12224 . NO_LDAS 0.0051 GT 1.9329 AG 1.6729 "[""INTERCHROMOSOMAL[chr15--chr18]""]" chr15:63983739-chr18:75202008 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DAP3--SMARCC1 1 0 1.0 0.0 ONLY_REF_SPLICE DAP3^ENSG00000132676.16 chr1:155725411:+ SMARCC1^ENSG00000173473.11 chr3:47678311:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2114:24938:4629 . YES_LDAS 0.0102 GT 1.9656 AG 1.9656 "[""INTERCHROMOSOMAL[chr1--chr3]""]" chr1:155725411-chr3:47678311 False 0 Read count too low: 1 < 5 FAIL 1
DAP3--AC073611.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE DAP3^ENSG00000132676.16 chr1:155725490:+ AC073611.1^ENSG00000288663.1 chr12:53297824:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2319:5296:4321 . YES_LDAS 0.0102 GT 1.8295 AG 1.3383 "[""INTERCHROMOSOMAL[chr1--chr12]""]" chr1:155725490-chr12:53297824 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DANCR--UBE2I 1 0 1.0 0.0 ONLY_REF_SPLICE DANCR^ENSG00000226950.8 chr4:52712959:+ UBE2I^ENSG00000103275.21 chr16:1314020:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2376:5126:27455 . YES_LDAS 0.0102 GT 1.9899 AG 1.9329 "[""INTERCHROMOSOMAL[chr4--chr16]""]" chr4:52712959-chr16:1314020 False 0 Read count too low: 1 < 5 FAIL 1
DANCR--PRPF3 1 0 1.0 0.0 INCL_NON_REF_SPLICE DANCR^ENSG00000226950.8 chr4:52720473:+ PRPF3^ENSG00000117360.13 chr1:150334935:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2228:23199:17086 . YES_LDAS 0.0102 GT 1.8892 AG 1.5219 "[""INTERCHROMOSOMAL[chr4--chr1]""]" chr4:52720473-chr1:150334935 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DANCR--GTF2IRD2 1 0 1.0 0.0 ONLY_REF_SPLICE DANCR^ENSG00000226950.8 chr4:52712959:+ GTF2IRD2^ENSG00000196275.14 chr7:74836383:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1169:43214:1280 . YES_LDAS 0.0102 GT 1.9899 AG 1.8892 "[""INTERCHROMOSOMAL[chr4--chr7]""]" chr4:52712959-chr7:74836383 False 0 Read count too low: 1 < 5 FAIL 1
DANCR--AP3B1 1 0 1.0 0.0 ONLY_REF_SPLICE DANCR^ENSG00000226950.8 chr4:52712959:+ AP3B1^ENSG00000132842.14 chr5:78267595:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1370:25221:3298 . YES_LDAS 0.0102 GT 1.9899 AG 1.6729 "[""INTERCHROMOSOMAL[chr4--chr5]""]" chr4:52712959-chr5:78267595 False 0 Read count too low: 1 < 5 FAIL 1
DANCR--ANGPTL6 1 0 1.0 0.0 ONLY_REF_SPLICE DANCR^ENSG00000226950.8 chr4:52712959:+ ANGPTL6^ENSG00000130812.10 chr19:10096573:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1114:29436:17044 . YES_LDAS 0.0102 GT 1.9899 AG 1.6895 "[""INTERCHROMOSOMAL[chr4--chr19]""]" chr4:52712959-chr19:10096573 False 0 Read count too low: 1 < 5 FAIL 1
CYTIP--PGAP6 1 0 1.0 0.0 ONLY_REF_SPLICE CYTIP^ENSG00000115165.10 chr2:157418523:- PGAP6^ENSG00000129925.11 chr16:372727:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2396:18224:18894 . YES_LDAS 0.0102 GT 1.8892 AG 1.4566 "[""INTERCHROMOSOMAL[chr2--chr16]""]" chr2:157418523-chr16:372727 False 0 Read count too low: 1 < 5 FAIL 1
CYTH3--COBLL1 1 0 1.0 0.0 INCL_NON_REF_SPLICE CYTH3^ENSG00000008256.16 chr7:6165545:- COBLL1^ENSG00000082438.18 chr2:164692668:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2348:35609:14620 . NO_LDAS 0.0102 GT 1.4566 AG 1.371 "[""INTERCHROMOSOMAL[chr7--chr2]""]" chr7:6165545-chr2:164692668 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CYTH1--MED25 1 0 1.0 0.0 ONLY_REF_SPLICE CYTH1^ENSG00000108669.16 chr17:78782202:- MED25^ENSG00000104973.19 chr19:49828449:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2308:37114:23476 . YES_LDAS 0.0102 GT 1.8256 AG 1.5546 "[""INTERCHROMOSOMAL[chr17--chr19]""]" chr17:78782202-chr19:49828449 False 0 Read count too low: 1 < 5 FAIL 1
CYTH1--CU633967.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE CYTH1^ENSG00000108669.16 chr17:78675449:- CU633967.1^ENSG00000274333.4 chr21:5586350:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2112:21573:4265 . YES_LDAS 0.0102 GT 1.6402 AG 1.7465 "[""INTERCHROMOSOMAL[chr17--chr21]""]" chr17:78675449-chr21:5586350 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CYSTM1--SKP1 1 0 1.0 0.0 ONLY_REF_SPLICE CYSTM1^ENSG00000120306.11 chr5:140175285:+ SKP1^ENSG00000113558.19 chr5:134174022:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1451:38117:15713 . YES_LDAS 0.0102 GT 1.6402 AG 1.9086 "[""INTRACHROMOSOMAL[chr5:6.00Mb]""]" chr5:140175285-chr5:134174022 False 0 Read count too low: 1 < 5 FAIL 1
CYP20A1--SPECC1 1 0 1.0 0.0 INCL_NON_REF_SPLICE CYP20A1^ENSG00000119004.16 chr2:203239134:+ SPECC1^ENSG00000128487.18 chr17:20315855:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1279:28166:19720 . NO_LDAS 0.0102 GT 1.6895 AG 1.9656 "[""INTERCHROMOSOMAL[chr2--chr17]""]" chr2:203239134-chr17:20315855 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CYFIP1--NFATC1 1 0 1.0 0.0 ONLY_REF_SPLICE CYFIP1^ENSG00000273749.5 chr15:22903706:- NFATC1^ENSG00000131196.18 chr18:79448782:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2220:51927:21612 . YES_LDAS 0.0102 GT 1.8295 AG 1.9329 "[""INTERCHROMOSOMAL[chr15--chr18]""]" chr15:22903706-chr18:79448782 False 0 Read count too low: 1 < 5 FAIL 1
CXXC4-AS1--RABGAP1L 1 0 1.0 0.0 ONLY_REF_SPLICE CXXC4-AS1^ENSG00000245384.2 chr4:104491060:+ RABGAP1L^ENSG00000152061.23 chr1:174683522:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1402:50786:22971 . NO_LDAS 0.0102 GT 1.9086 AG 1.8892 "[""INTERCHROMOSOMAL[chr4--chr1]""]" chr4:104491060-chr1:174683522 False 0 Read count too low: 1 < 5 FAIL 1
CUX2--CENPM 1 0 1.0 0.0 INCL_NON_REF_SPLICE CUX2^ENSG00000111249.14 chr12:111349734:+ CENPM^ENSG00000100162.15 chr22:41946496:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2488:31766:23574 . NO_LDAS 0.0102 GT 1.9656 AG 1.7232 "[""INTERCHROMOSOMAL[chr12--chr22]""]" chr12:111349734-chr22:41946496 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CUL9--USP54 1 0 1.0 0.0 INCL_NON_REF_SPLICE CUL9^ENSG00000112659.14 chr6:43222896:+ USP54^ENSG00000166348.19 chr10:73516533:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1156:49961:11285 . YES_LDAS 0.0102 GT 1.9329 AG 1.7968 "[""INTERCHROMOSOMAL[chr6--chr10]""]" chr6:43222896-chr10:73516533 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CUL5--MIR1973 1 0 1.0 0.0 INCL_NON_REF_SPLICE CUL5^ENSG00000166266.14 chr11:108072435:+ MIR1973^ENSG00000284253.1 chr4:116299761:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2394:13693:4433 . NO_LDAS 0.0102 GT 1.9219 AG 1.9656 "[""INTERCHROMOSOMAL[chr11--chr4]""]" chr11:108072435-chr4:116299761 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CUL5--FCRL5 1 0 1.0 0.0 ONLY_REF_SPLICE CUL5^ENSG00000166266.14 chr11:108095691:+ FCRL5^ENSG00000143297.19 chr1:157527895:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2397:30075:23588 . YES_LDAS 0.0102 GT 1.8062 AG 1.7819 "[""INTERCHROMOSOMAL[chr11--chr1]""]" chr11:108095691-chr1:157527895 False 0 Read count too low: 1 < 5 FAIL 1
CU633906.2--SORD 1 0 0.12 0.0 ONLY_REF_SPLICE CU633906.2^ENSG00000278903.3 chr21:6318604:+ SORD^ENSG00000140263.15 chr15:45040408:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1331:38821:28226 . YES_LDAS 0.0012 GT 1.6895 AG 1.9329 "[""INTERCHROMOSOMAL[chr21--chr15]""]" chr21:6318604-chr15:45040408 False 0 Read count too low: 1 < 5 FAIL 1
CU633904.1--ZSCAN30 1 0 0.2 0.0 ONLY_REF_SPLICE CU633904.1^ENSG00000276077.4 chr21:7430838:+ ZSCAN30^ENSG00000186814.14 chr18:35254381:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1135:27948:16231 . YES_LDAS 0.002 GT 1.6895 AG 1.6729 "[""INTERCHROMOSOMAL[chr21--chr18]""]" chr21:7430838-chr18:35254381 False 0 Read count too low: 1 < 5 FAIL 1
CU633904.1--MRPS6 1 0 0.11 0.0 ONLY_REF_SPLICE CU633904.1^ENSG00000276077.4 chr21:7430838:+ MRPS6^ENSG00000243927.6 chr21:34125341:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1335:31912:15867 . YES_LDAS 0.0011 GT 1.6895 AG 1.9656 "[""INTRACHROMOSOMAL[chr21:26.60Mb]""]" chr21:7430838-chr21:34125341 False 0 Read count too low: 1 < 5 FAIL 1
CTSB--SMARCC2 1 0 1.0 0.0 INCL_NON_REF_SPLICE CTSB^ENSG00000164733.22 chr8:11844109:- SMARCC2^ENSG00000139613.12 chr12:56168194:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1247:2480:16428 . NO_LDAS 0.0102 GT 1.7056 AG 1.8062 "[""INTERCHROMOSOMAL[chr8--chr12]""]" chr8:11844109-chr12:56168194 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CTSB--MIA2 1 0 1.0 0.0 ONLY_REF_SPLICE CTSB^ENSG00000164733.22 chr8:11868001:- MIA2^ENSG00000150527.17 chr14:39276934:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1369:41604:5022 . YES_LDAS 0.0102 GT 1.6895 AG 1.8892 "[""INTERCHROMOSOMAL[chr8--chr14]""]" chr8:11868001-chr14:39276934 False 0 Read count too low: 1 < 5 FAIL 1
CTDP1--PVRIG 1 0 1.0 0.0 INCL_NON_REF_SPLICE CTDP1^ENSG00000060069.17 chr18:79715169:+ PVRIG^ENSG00000213413.2 chr7:100219929:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2105:38441:11313 . NO_LDAS 0.0102 GT 1.8295 AG 1.7056 "[""INTERCHROMOSOMAL[chr18--chr7]""]" chr18:79715169-chr7:100219929 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CTDNEP1--ARHGEF1 1 0 1.0 0.0 INCL_NON_REF_SPLICE CTDNEP1^ENSG00000175826.12 chr17:7246791:- ARHGEF1^ENSG00000076928.18 chr19:41904987:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1498:21670:13821 . YES_LDAS 0.0102 GT 1.8892 AG 1.9329 "[""INTERCHROMOSOMAL[chr17--chr19]""]" chr17:7246791-chr19:41904987 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CTCF--HMGB1 1 0 0.5 0.0 ONLY_REF_SPLICE CTCF^ENSG00000102974.16 chr16:67571264:+ HMGB1^ENSG00000189403.15 chr13:30463694:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1114:11905:8903 . YES_LDAS 0.0051 GT 1.8062 AG 1.1033 "[""INTERCHROMOSOMAL[chr16--chr13]""]" chr16:67571264-chr13:30463694 False 0 Read count too low: 1 < 5 FAIL 1
CTBP1--MAEA 1 0 1.0 0.0 ONLY_REF_SPLICE CTBP1^ENSG00000159692.16 chr4:1248916:- MAEA^ENSG00000090316.16 chr4:1332757:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2153:22811:27651 . YES_LDAS 0.0102 GT 1.7819 AG 1.6729 "[""INTRACHROMOSOMAL[chr4:0.04Mb]"",""LOCAL_INVERSION:-:+:[39934]""]" chr4:1248916-chr4:1332757 False 0 Read count too low: 1 < 5 FAIL 1
CTBP1--AC019257.7 1 0 1.0 0.0 INCL_NON_REF_SPLICE CTBP1^ENSG00000159692.16 chr4:1236522:- AC019257.7^ENSG00000285957.1 chr8:1960088:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1139:14632:21052 . NO_LDAS 0.0102 GT 1.8062 AG 1.7819 "[""INTERCHROMOSOMAL[chr4--chr8]""]" chr4:1236522-chr8:1960088 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CSTF3--ANO5 1 0 1.0 0.0 ONLY_REF_SPLICE CSTF3^ENSG00000176102.13 chr11:33161299:- ANO5^ENSG00000171714.12 chr11:22203804:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2162:16460:4713 . YES_LDAS 0.0102 GT 1.5301 AG 1.6402 "[""INTRACHROMOSOMAL[chr11:10.79Mb]""]" chr11:33161299-chr11:22203804 False 0 Read count too low: 1 < 5 FAIL 1
CSNK2A1--FAF2 1 0 0.5 0.0 ONLY_REF_SPLICE CSNK2A1^ENSG00000101266.19 chr20:483928:- FAF2^ENSG00000113194.13 chr5:176479188:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2465:12472:24344 . YES_LDAS 0.0051 GT 1.8892 AG 1.9656 "[""INTERCHROMOSOMAL[chr20--chr5]""]" chr20:483928-chr5:176479188 False 0 Read count too low: 1 < 5 FAIL 1
CSNK1E--TPTEP2 1 0 1.0 0.0 ONLY_REF_SPLICE CSNK1E^ENSG00000213923.13 chr22:38298786:- TPTEP2^ENSG00000244627.5 chr22:38336706:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1105:3298:19748 . YES_LDAS 0.0102 GT 1.8892 AG 1.6729 "[""INTRACHROMOSOMAL[chr22:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[17678]""]" chr22:38298786-chr22:38336706 False 0 Read count too low: 1 < 5 FAIL 1
CSDE1--TMEM131 1 0 1.0 0.0 INCL_NON_REF_SPLICE CSDE1^ENSG00000009307.16 chr1:114739692:- TMEM131^ENSG00000075568.17 chr2:97844211:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2355:52032:16245 . YES_LDAS 0.0102 GT 1.7465 AG 1.5656 "[""INTERCHROMOSOMAL[chr1--chr2]""]" chr1:114739692-chr2:97844211 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CRNDE--CPNE1 1 0 1.0 0.0 ONLY_REF_SPLICE CRNDE^ENSG00000245694.10 chr16:54923585:- CPNE1^ENSG00000214078.13 chr20:35632923:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1438:30124:4223 . YES_LDAS 0.0102 GT 1.7819 AG 1.9086 "[""INTERCHROMOSOMAL[chr16--chr20]""]" chr16:54923585-chr20:35632923 False 0 Read count too low: 1 < 5 FAIL 1
CRK--INPP5K 1 0 1.0 0.0 ONLY_REF_SPLICE CRK^ENSG00000167193.8 chr17:1455877:- INPP5K^ENSG00000132376.20 chr17:1509799:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1141:23126:25928 . YES_LDAS 0.0102 GT 1.3753 AG 1.7819 "[""INTRACHROMOSOMAL[chr17:0.03Mb]"",""LOCAL_REARRANGEMENT:-:[31415]""]" chr17:1455877-chr17:1509799 False 0 Read count too low: 1 < 5 FAIL 1
CRIPT--DDHD1 1 0 1.0 0.0 INCL_NON_REF_SPLICE CRIPT^ENSG00000119878.6 chr2:46627924:+ DDHD1^ENSG00000100523.16 chr14:53038879:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1190:21039:16624 . NO_LDAS 0.0102 GT 1.6895 AG 1.4256 "[""INTERCHROMOSOMAL[chr2--chr14]""]" chr2:46627924-chr14:53038879 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CREB3L2--TRIM24 1 0 1.0 0.0 ONLY_REF_SPLICE CREB3L2^ENSG00000182158.15 chr7:138001604:- TRIM24^ENSG00000122779.18 chr7:138504290:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1304:36564:27567 . YES_LDAS 0.0102 GT 1.8892 AG 1.7968 "[""INTRACHROMOSOMAL[chr7:0.46Mb]""]" chr7:138001604-chr7:138504290 False 0 Read count too low: 1 < 5 FAIL 1
CREB3L2--SCRN1 1 0 1.0 0.0 ONLY_REF_SPLICE CREB3L2^ENSG00000182158.15 chr7:138001604:- SCRN1^ENSG00000136193.17 chr7:29955360:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1212:47526:22677 . YES_LDAS 0.0102 GT 1.8892 AG 1.8062 "[""INTRACHROMOSOMAL[chr7:107.88Mb]""]" chr7:138001604-chr7:29955360 False 0 Read count too low: 1 < 5 FAIL 1
CRBN--ACADM 1 0 1.0 0.0 ONLY_REF_SPLICE CRBN^ENSG00000113851.15 chr3:3156219:- ACADM^ENSG00000117054.15 chr1:75787497:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2184:40317:18095 . YES_LDAS 0.0102 GT 1.8295 AG 1.8256 "[""INTERCHROMOSOMAL[chr3--chr1]""]" chr3:3156219-chr1:75787497 False 0 Read count too low: 1 < 5 FAIL 1
CPOX--DDX5 1 0 1.0 0.0 ONLY_REF_SPLICE CPOX^ENSG00000080819.9 chr3:98590632:- DDX5^ENSG00000108654.16 chr17:64504842:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1281:10004:21808 . YES_LDAS 0.0102 GT 1.7819 AG 1.8256 "[""INTERCHROMOSOMAL[chr3--chr17]""]" chr3:98590632-chr17:64504842 False 0 Read count too low: 1 < 5 FAIL 1
CPNE8--RAB3IP 1 0 1.0 0.0 ONLY_REF_SPLICE CPNE8^ENSG00000139117.14 chr12:38905437:- RAB3IP^ENSG00000127328.22 chr12:69755384:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2164:14648:17885 . YES_LDAS 0.0102 GT 1.8256 AG 1.7465 "[""INTRACHROMOSOMAL[chr12:30.83Mb]""]" chr12:38905437-chr12:69755384 False 0 Read count too low: 1 < 5 FAIL 1
CPNE8--DNM1L 1 0 1.0 0.0 ONLY_REF_SPLICE CPNE8^ENSG00000139117.14 chr12:38675717:- DNM1L^ENSG00000087470.19 chr12:32731014:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2171:45438:4741 . YES_LDAS 0.0102 GT 1.9329 AG 1.7968 "[""INTRACHROMOSOMAL[chr12:5.90Mb]""]" chr12:38675717-chr12:32731014 False 0 Read count too low: 1 < 5 FAIL 1
CPNE7--SEC62 1 0 1.0 0.0 INCL_NON_REF_SPLICE CPNE7^ENSG00000178773.15 chr16:89591260:+ SEC62^ENSG00000008952.17 chr3:169997650:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1476:4891:6423 . YES_LDAS 0.0102 GT 1.9329 AG 1.9329 "[""INTERCHROMOSOMAL[chr16--chr3]""]" chr16:89591260-chr3:169997650 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CPNE1--ZMYND8 1 0 1.0 0.0 ONLY_REF_SPLICE CPNE1^ENSG00000214078.13 chr20:35664879:- ZMYND8^ENSG00000101040.19 chr20:47310204:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1478:10748:6423 . NO_LDAS 0.0102 GT 1.3996 AG 1.9329 "[""INTRACHROMOSOMAL[chr20:11.54Mb]""]" chr20:35664879-chr20:47310204 False 0 Read count too low: 1 < 5 FAIL 1
COTL1--ESAM 1 0 1.0 0.0 INCL_NON_REF_SPLICE COTL1^ENSG00000103187.8 chr16:84590205:- ESAM^ENSG00000149564.12 chr11:124756243:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2136:48691:26488 . YES_LDAS 0.0102 GT 1.9086 AG 1.6895 "[""INTERCHROMOSOMAL[chr16--chr11]""]" chr16:84590205-chr11:124756243 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
COQ4--PNISR 1 0 1.0 0.0 ONLY_REF_SPLICE COQ4^ENSG00000167113.11 chr9:128325881:+ PNISR^ENSG00000132424.17 chr6:99404702:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1243:47226:19132 . YES_LDAS 0.0102 GT 1.9656 AG 1.8892 "[""INTERCHROMOSOMAL[chr9--chr6]""]" chr9:128325881-chr6:99404702 False 0 Read count too low: 1 < 5 FAIL 1
COQ4--GRK6 1 0 1.0 0.0 ONLY_REF_SPLICE COQ4^ENSG00000167113.11 chr9:128325881:+ GRK6^ENSG00000198055.11 chr5:177440700:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2153:5805:22887 . YES_LDAS 0.0102 GT 1.9656 AG 1.8295 "[""INTERCHROMOSOMAL[chr9--chr5]""]" chr9:128325881-chr5:177440700 False 0 Read count too low: 1 < 5 FAIL 1
COPS8--CDKL5 1 0 1.0 0.0 INCL_NON_REF_SPLICE COPS8^ENSG00000198612.11 chr2:237086042:+ CDKL5^ENSG00000008086.13 chrX:18630092:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2449:5450:17787 . NO_LDAS 0.0102 GT 1.8256 AG 1.9899 "[""INTERCHROMOSOMAL[chr2--chrX]""]" chr2:237086042-chrX:18630092 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
COPS7B--FIGNL1 1 0 1.0 0.0 ONLY_REF_SPLICE COPS7B^ENSG00000144524.18 chr2:231788732:+ FIGNL1^ENSG00000132436.11 chr7:50447297:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1132:5255:17310 . YES_LDAS 0.0102 GT 1.8062 AG 1.7465 "[""INTERCHROMOSOMAL[chr2--chr7]""]" chr2:231788732-chr7:50447297 False 0 Read count too low: 1 < 5 FAIL 1
COPG1--AC008969.2 1 0 1.0 0.0 INCL_NON_REF_SPLICE COPG1^ENSG00000181789.14 chr3:129272415:+ AC008969.2^ENSG00000286949.1 chr19:58025247:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2232:32939:27735 . NO_LDAS 0.0102 GT 1.7819 AG 1.7465 "[""INTERCHROMOSOMAL[chr3--chr19]""]" chr3:129272415-chr19:58025247 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
COP1--RALGPS2 1 0 1.0 0.0 ONLY_REF_SPLICE COP1^ENSG00000143207.21 chr1:176116624:- RALGPS2^ENSG00000116191.17 chr1:178808045:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1468:11145:27119 . YES_LDAS 0.0102 GT 1.9656 AG 1.8892 "[""INTRACHROMOSOMAL[chr1:2.52Mb]""]" chr1:176116624-chr1:178808045 False 0 Read count too low: 1 < 5 FAIL 1
COMMD6--CHMP5 1 0 1.0 0.0 ONLY_REF_SPLICE COMMD6^ENSG00000188243.13 chr13:75530114:- CHMP5^ENSG00000086065.14 chr9:33270623:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2349:24663:21948 . NO_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTERCHROMOSOMAL[chr13--chr9]""]" chr13:75530114-chr9:33270623 False 0 Read count too low: 1 < 5 FAIL 1
COMMD10--AP3S1 1 0 1.0 0.0 ONLY_REF_SPLICE COMMD10^ENSG00000145781.9 chr5:116134178:+ AP3S1^ENSG00000177879.17 chr5:115852979:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2364:3937:27133 . YES_LDAS 0.0102 GT 1.6729 AG 1.8256 "[""YOSHIHARA_TCGA"",""Klijn_CellLines"",""GTEx_recurrent_StarF2019"",""DEEPEST2019"",""ChimerPub"",""TumorFusionsNAR2018"",""ChimerSeq"",""INTRACHROMOSOMAL[chr5:0.17Mb]""]" chr5:116134178-chr5:115852979 False 0 Excluded annotation pattern: GTEx_recurrent_StarF2019 FAIL 1
COL19A1--RNF135 1 0 1.0 0.0 ONLY_REF_SPLICE COL19A1^ENSG00000082293.13 chr6:69962870:+ RNF135^ENSG00000181481.14 chr17:30984617:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1329:21557:12280 . YES_LDAS 0.0102 GT 1.6895 AG 1.6895 "[""INTERCHROMOSOMAL[chr6--chr17]""]" chr6:69962870-chr17:30984617 False 0 Read count too low: 1 < 5 FAIL 1
COL19A1--MAN1A1 1 0 1.0 0.0 ONLY_REF_SPLICE COL19A1^ENSG00000082293.13 chr6:69866640:+ MAN1A1^ENSG00000111885.7 chr6:119248354:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1244:36928:5358 . YES_LDAS 0.0102 GT 1.7232 AG 1.6895 "[""INTRACHROMOSOMAL[chr6:48.96Mb]""]" chr6:69866640-chr6:119248354 False 0 Read count too low: 1 < 5 FAIL 1
COL19A1--ETV6 1 0 1.0 0.0 ONLY_REF_SPLICE COL19A1^ENSG00000082293.13 chr6:69879658:+ ETV6^ENSG00000139083.11 chr12:11839140:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1103:31289:16946 . YES_LDAS 0.0102 GT 1.8323 AG 1.9656 "[""INTERCHROMOSOMAL[chr6--chr12]""]" chr6:69879658-chr12:11839140 False 0 Read count too low: 1 < 5 FAIL 1
COG7--NPLOC4 1 0 1.0 0.0 ONLY_REF_SPLICE COG7^ENSG00000168434.13 chr16:23452826:- NPLOC4^ENSG00000182446.14 chr17:81559416:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1418:49597:11916 . YES_LDAS 0.0102 GT 1.7819 AG 1.7968 "[""INTERCHROMOSOMAL[chr16--chr17]""]" chr16:23452826-chr17:81559416 False 0 Read count too low: 1 < 5 FAIL 1
COG5--AGBL1 1 0 1.0 0.0 INCL_NON_REF_SPLICE COG5^ENSG00000164597.15 chr7:107362033:- AGBL1^ENSG00000273540.5 chr15:86910462:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2297:16978:24779 . NO_LDAS 0.0102 GT 1.4566 AG 1.9656 "[""INTERCHROMOSOMAL[chr7--chr15]""]" chr7:107362033-chr15:86910462 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CNTRL--AC108134.1 1 0 1.0 0.0 ONLY_REF_SPLICE CNTRL^ENSG00000119397.18 chr9:121160302:+ AC108134.1^ENSG00000205890.3 chr16:3037279:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2376:10684:24443 . NO_LDAS 0.0102 GT 1.6402 AG 1.7819 "[""INTERCHROMOSOMAL[chr9--chr16]""]" chr9:121160302-chr16:3037279 False 0 Read count too low: 1 < 5 FAIL 1
CNOT6L--HMGB1 1 0 1.0 0.0 ONLY_REF_SPLICE CNOT6L^ENSG00000138767.13 chr4:77819304:- HMGB1^ENSG00000189403.15 chr13:30463694:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2181:15829:12336 . YES_LDAS 0.0102 GT 1.2867 AG 1.1033 "[""INTERCHROMOSOMAL[chr4--chr13]""]" chr4:77819304-chr13:30463694 False 0 Read count too low: 1 < 5 FAIL 1
CNOT4--REV1 1 0 1.0 0.0 ONLY_REF_SPLICE CNOT4^ENSG00000080802.19 chr7:135410524:- REV1^ENSG00000135945.10 chr2:99435941:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2375:34169:22663 . YES_LDAS 0.0102 GT 1.8256 AG 1.8256 "[""INTERCHROMOSOMAL[chr7--chr2]""]" chr7:135410524-chr2:99435941 False 0 Read count too low: 1 < 5 FAIL 1
CNOT2--WWC3 1 0 1.0 0.0 ONLY_REF_SPLICE CNOT2^ENSG00000111596.14 chr12:70330469:+ WWC3^ENSG00000047644.19 chrX:10063445:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2169:38133:12462 . YES_LDAS 0.0102 GT 1.8892 AG 1.8295 "[""INTERCHROMOSOMAL[chr12--chrX]""]" chr12:70330469-chrX:10063445 False 0 Read count too low: 1 < 5 FAIL 1
CNN2--PPP1R12C 1 0 1.0 0.0 ONLY_REF_SPLICE CNN2^ENSG00000064666.15 chr19:1032696:+ PPP1R12C^ENSG00000125503.13 chr19:55096335:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2207:4147:8553 . YES_LDAS 0.0102 GT 1.6402 AG 1.7968 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr19:54.05Mb]""]" chr19:1032696-chr19:55096335 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
CNN2--DOC2GP 1 0 1.0 0.0 INCL_NON_REF_SPLICE CNN2^ENSG00000064666.15 chr19:1032646:+ DOC2GP^ENSG00000231793.5 chr11:67613037:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2213:20084:29291 . NO_LDAS 0.0102 GT 1.9899 AG 1.6895 "[""INTERCHROMOSOMAL[chr19--chr11]""]" chr19:1032646-chr11:67613037 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CNN2--DDX39A 1 0 1.0 0.0 ONLY_REF_SPLICE CNN2^ENSG00000064666.15 chr19:1032696:+ DDX39A^ENSG00000123136.15 chr19:14413224:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1398:4705:17506 . YES_LDAS 0.0102 GT 1.6402 AG 1.8892 "[""INTRACHROMOSOMAL[chr19:13.37Mb]""]" chr19:1032696-chr19:14413224 False 0 Read count too low: 1 < 5 FAIL 1
CMAS--IPCEF1 1 0 1.0 0.0 ONLY_REF_SPLICE CMAS^ENSG00000111726.13 chr12:22046563:+ IPCEF1^ENSG00000074706.13 chr6:154168113:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2177:32017:22467 . YES_LDAS 0.0102 GT 1.8892 AG 1.6402 "[""INTERCHROMOSOMAL[chr12--chr6]""]" chr12:22046563-chr6:154168113 False 0 Read count too low: 1 < 5 FAIL 1
CLPTM1L--ADAM8 1 0 1.0 0.0 INCL_NON_REF_SPLICE CLPTM1L^ENSG00000049656.14 chr5:1344649:- ADAM8^ENSG00000151651.16 chr10:133272235:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1279:27568:27035 . YES_LDAS 0.0102 GT 0.9183 AG 1.8062 "[""INTERCHROMOSOMAL[chr5--chr10]""]" chr5:1344649-chr10:133272235 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CLN8--ERICH1 1 0 1.0 0.0 ONLY_REF_SPLICE CLN8^ENSG00000182372.10 chr8:1771597:+ ERICH1^ENSG00000104714.14 chr8:674047:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2124:29485:18473 . YES_LDAS 0.0102 GT 1.9329 AG 1.9899 "[""INTRACHROMOSOMAL[chr8:1.02Mb]""]" chr8:1771597-chr8:674047 False 0 Read count too low: 1 < 5 FAIL 1
CLIP2--ZFP92 1 0 1.0 0.0 INCL_NON_REF_SPLICE CLIP2^ENSG00000106665.16 chr7:74317667:+ ZFP92^ENSG00000189420.8 chrX:153418305:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2476:1914:7348 . YES_LDAS 0.0102 GT 1.9329 AG 1.4566 "[""INTERCHROMOSOMAL[chr7--chrX]""]" chr7:74317667-chrX:153418305 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CLIP2--AC008267.6 1 0 1.0 0.0 ONLY_REF_SPLICE CLIP2^ENSG00000106665.16 chr7:74339004:+ AC008267.6^ENSG00000244657.1 chr7:66485153:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1106:28328:16610 . YES_LDAS 0.0102 GT 1.6402 AG 1.7465 "[""INTRACHROMOSOMAL[chr7:7.80Mb]""]" chr7:74339004-chr7:66485153 False 0 Read count too low: 1 < 5 FAIL 1
CLECL1--DENND1A 1 0 1.0 0.0 ONLY_REF_SPLICE CLECL1^ENSG00000184293.7 chr12:9732949:- DENND1A^ENSG00000119522.16 chr9:123652123:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2364:18887:23630 . YES_LDAS 0.0102 GT 1.9899 AG 1.7232 "[""INTERCHROMOSOMAL[chr12--chr9]""]" chr12:9732949-chr9:123652123 False 0 Read count too low: 1 < 5 FAIL 1
CLDN9--TUBB2A 1 0 0.25 0.0 INCL_NON_REF_SPLICE CLDN9^ENSG00000213937.4 chr16:3013479:+ TUBB2A^ENSG00000137267.7 chr6:3154085:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2269:32058:21612 . NO_LDAS 0.0026 AT 1.9656 AC 1.9086 "[""INTERCHROMOSOMAL[chr16--chr6]""]" chr16:3013479-chr6:3154085 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CLCN6--RCC2 1 0 1.0 0.0 ONLY_REF_SPLICE CLCN6^ENSG00000011021.23 chr1:11816680:+ RCC2^ENSG00000179051.14 chr1:17416646:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1469:2675:6199 . YES_LDAS 0.0102 GT 1.8256 AG 1.8892 "[""INTRACHROMOSOMAL[chr1:5.56Mb]""]" chr1:11816680-chr1:17416646 False 0 Read count too low: 1 < 5 FAIL 1
CLCN6--PDE6B 1 0 0.5 0.0 INCL_NON_REF_SPLICE CLCN6^ENSG00000011021.23 chr1:11838597:+ PDE6B^ENSG00000133256.13 chr4:670084:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1481:29995:25325 . NO_LDAS 0.0051 GT 1.6402 AG 1.8323 "[""INTERCHROMOSOMAL[chr1--chr4]""]" chr1:11838597-chr4:670084 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CLCN6--MGAT4A 1 0 0.5 0.0 INCL_NON_REF_SPLICE CLCN6^ENSG00000011021.23 chr1:11838597:+ MGAT4A^ENSG00000071073.13 chr2:98675075:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1481:29995:25325 . NO_LDAS 0.0051 GT 1.6402 AG 1.8323 "[""INTERCHROMOSOMAL[chr1--chr2]""]" chr1:11838597-chr2:98675075 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CLCC1--LRPPRC 1 0 1.0 0.0 ONLY_REF_SPLICE CLCC1^ENSG00000121940.16 chr1:108943475:- LRPPRC^ENSG00000138095.19 chr2:43925157:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1313:12739:7852 . YES_LDAS 0.0102 GT 1.4295 AG 1.9329 "[""INTERCHROMOSOMAL[chr1--chr2]""]" chr1:108943475-chr2:43925157 False 0 Read count too low: 1 < 5 FAIL 1
CKAP2L--AKAP17A 1 0 1.0 0.0 INCL_NON_REF_SPLICE CKAP2L^ENSG00000169607.13 chr2:112755977:- AKAP17A^ENSG00000197976.12 chrX:1599433:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2422:1493:19903 . YES_LDAS 0.0102 GT 1.7056 AG 1.7056 "[""INTERCHROMOSOMAL[chr2--chrX]""]" chr2:112755977-chrX:1599433 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CKAP2--VPS36 1 0 1.0 0.0 ONLY_REF_SPLICE CKAP2^ENSG00000136108.15 chr13:52456607:+ VPS36^ENSG00000136100.14 chr13:52418056:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2272:28126:16652 . YES_LDAS 0.0102 GT 1.9329 AG 1.9329 "[""INTRACHROMOSOMAL[chr13:0.00Mb]"",""LOCAL_INVERSION:+:-:[4795]""]" chr13:52456607-chr13:52418056 False 0 Read count too low: 1 < 5 FAIL 1
CKAP2--C17orf75 1 0 1.0 0.0 ONLY_REF_SPLICE CKAP2^ENSG00000136108.15 chr13:52462567:+ C17orf75^ENSG00000108666.10 chr17:32324774:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1123:23612:26628 . YES_LDAS 0.0102 GT 1.7819 AG 1.9086 "[""INTERCHROMOSOMAL[chr13--chr17]""]" chr13:52462567-chr17:32324774 False 0 Read count too low: 1 < 5 FAIL 1
CISD2--JADE1 1 0 1.0 0.0 ONLY_REF_SPLICE CISD2^ENSG00000145354.12 chr4:102869187:+ JADE1^ENSG00000077684.16 chr4:128816367:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1469:7124:23406 . NO_LDAS 0.0102 GT 1.9656 AG 1.9656 "[""INTRACHROMOSOMAL[chr4:25.92Mb]""]" chr4:102869187-chr4:128816367 False 0 Read count too low: 1 < 5 FAIL 1
CIP2A--BBS1 1 0 1.0 0.0 INCL_NON_REF_SPLICE CIP2A^ENSG00000163507.14 chr3:108568160:- BBS1^ENSG00000174483.20 chr11:66522874:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1202:31799:14242 . NO_LDAS 0.0102 GT 1.8892 AG 1.9656 "[""INTERCHROMOSOMAL[chr3--chr11]""]" chr3:108568160-chr11:66522874 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CHSY1--RNF169 1 0 1.0 0.0 ONLY_REF_SPLICE CHSY1^ENSG00000131873.7 chr15:101235082:- RNF169^ENSG00000166439.6 chr11:74789626:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1211:13863:2934 . YES_LDAS 0.0102 GT 1.8323 AG 1.8323 "[""INTERCHROMOSOMAL[chr15--chr11]""]" chr15:101235082-chr11:74789626 False 0 Read count too low: 1 < 5 FAIL 1
CHMP4A--IREB2 1 0 1.0 0.0 ONLY_REF_SPLICE CHMP4A^ENSG00000254505.11 chr14:24213409:- IREB2^ENSG00000136381.13 chr15:78493909:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1196:32786:16035 . YES_LDAS 0.0102 GT 1.8295 AG 1.7968 "[""INTERCHROMOSOMAL[chr14--chr15]""]" chr14:24213409-chr15:78493909 False 0 Read count too low: 1 < 5 FAIL 1
CHMP2A--WDR46 1 0 1.0 0.0 INCL_NON_REF_SPLICE CHMP2A^ENSG00000130724.9 chr19:58552055:- WDR46^ENSG00000227057.10 chr6:33289152:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2153:34031:12868 . NO_LDAS 0.0102 GT 1.2867 AG 1.8892 "[""INTERCHROMOSOMAL[chr19--chr6]""]" chr19:58552055-chr6:33289152 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CHKA--VRK1 1 0 1.0 0.0 ONLY_REF_SPLICE CHKA^ENSG00000110721.12 chr11:68097019:- VRK1^ENSG00000100749.9 chr14:96876030:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1371:10409:27890 . YES_LDAS 0.0102 GT 1.9086 AG 1.1589 "[""INTERCHROMOSOMAL[chr11--chr14]""]" chr11:68097019-chr14:96876030 False 0 Read count too low: 1 < 5 FAIL 1
CHKA--TMEM209 1 0 0.5 0.0 INCL_NON_REF_SPLICE CHKA^ENSG00000110721.12 chr11:68064525:- TMEM209^ENSG00000146842.17 chr7:130202661:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2338:16751:4909 . NO_LDAS 0.0051 GT 1.8256 AG 1.7056 "[""INTERCHROMOSOMAL[chr11--chr7]""]" chr11:68064525-chr7:130202661 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CHKA--CYP2C23P 1 0 0.5 0.0 INCL_NON_REF_SPLICE CHKA^ENSG00000110721.12 chr11:68064525:- CYP2C23P^ENSG00000283232.1 chr10:100140017:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2338:16751:4909 . NO_LDAS 0.0051 GT 1.8256 AG 1.9086 "[""INTERCHROMOSOMAL[chr11--chr10]""]" chr11:68064525-chr10:100140017 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CHI3L2--SQSTM1 1 0 1.0 0.0 ONLY_REF_SPLICE CHI3L2^ENSG00000064886.14 chr1:111231294:+ SQSTM1^ENSG00000161011.20 chr5:179836436:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1219:2497:11355 . NO_LDAS 0.0102 GT 1.9086 AG 1.7056 "[""INTERCHROMOSOMAL[chr1--chr5]""]" chr1:111231294-chr5:179836436 False 0 Read count too low: 1 < 5 FAIL 1
CHFR--LDB1 1 0 1.0 0.0 ONLY_REF_SPLICE CHFR^ENSG00000072609.18 chr12:132861467:- LDB1^ENSG00000198728.11 chr10:102111536:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1251:40156:16638 . NO_LDAS 0.0102 GT 1.2729 AG 1.9219 "[""INTERCHROMOSOMAL[chr12--chr10]""]" chr12:132861467-chr10:102111536 False 0 Read count too low: 1 < 5 FAIL 1
CHD9--MGST3 1 0 1.0 0.0 ONLY_REF_SPLICE CHD9^ENSG00000177200.17 chr16:53157541:+ MGST3^ENSG00000143198.13 chr1:165651978:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2401:40698:2107 . YES_LDAS 0.0102 GT 1.9899 AG 1.9086 "[""INTERCHROMOSOMAL[chr16--chr1]""]" chr16:53157541-chr1:165651978 False 0 Read count too low: 1 < 5 FAIL 1
CHD7--ZMYND11 1 0 1.0 0.0 ONLY_REF_SPLICE CHD7^ENSG00000171316.12 chr8:60828806:+ ZMYND11^ENSG00000015171.20 chr10:242021:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2394:32244:5820 . YES_LDAS 0.0102 GT 1.3383 AG 1.8892 "[""INTERCHROMOSOMAL[chr8--chr10]""]" chr8:60828806-chr10:242021 False 0 Read count too low: 1 < 5 FAIL 1
CHD6--EIF2S2 1 0 0.33 0.0 ONLY_REF_SPLICE CHD6^ENSG00000124177.16 chr20:41551305:- EIF2S2^ENSG00000125977.7 chr20:34090602:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2440:18499:19062 . YES_LDAS 0.0034 GT 1.1589 AG 1.7819 "[""INTRACHROMOSOMAL[chr20:7.29Mb]""]" chr20:41551305-chr20:34090602 False 0 Read count too low: 1 < 5 FAIL 1
CHD3--PAX6 1 0 0.5 0.0 INCL_NON_REF_SPLICE CHD3^ENSG00000170004.17 chr17:7893360:+ PAX6^ENSG00000007372.24 chr11:31793765:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1233:44718:23840 . NO_LDAS 0.0051 GT 1.7056 AG 1.4716 "[""INTERCHROMOSOMAL[chr17--chr11]""]" chr17:7893360-chr11:31793765 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CHD1--TMEM184B 1 0 1.0 0.0 ONLY_REF_SPLICE CHD1^ENSG00000153922.11 chr5:98868495:- TMEM184B^ENSG00000198792.13 chr22:38248019:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1363:49969:13989 . YES_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chr5--chr22]""]" chr5:98868495-chr22:38248019 False 0 Read count too low: 1 < 5 FAIL 1
CHCHD7--CDC5L 1 0 1.0 0.0 ONLY_REF_SPLICE CHCHD7^ENSG00000170791.18 chr8:56216506:+ CDC5L^ENSG00000096401.8 chr6:44422647:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1377:28053:24905 . YES_LDAS 0.0102 GT 1.8892 AG 1.9656 "[""INTERCHROMOSOMAL[chr8--chr6]""]" chr8:56216506-chr6:44422647 False 0 Read count too low: 1 < 5 FAIL 1
CHCHD3--EXOC4 1 0 1.0 0.0 ONLY_REF_SPLICE CHCHD3^ENSG00000106554.13 chr7:132975169:- EXOC4^ENSG00000131558.15 chr7:133274982:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2292:23199:25045 . YES_LDAS 0.0102 GT 1.8062 AG 1.9656 "[""Klijn_CellLines"",""DEEPEST2019"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:0.17Mb]""]" chr7:132975169-chr7:133274982 False 0 Read count too low: 1 < 5 FAIL 1
CHAF1A--PREB 1 0 1.0 0.0 INCL_NON_REF_SPLICE CHAF1A^ENSG00000167670.16 chr19:4423395:+ PREB^ENSG00000138073.14 chr2:27133553:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1397:18329:17591 . NO_LDAS 0.0102 GT 0.971 AG 1.5219 "[""INTERCHROMOSOMAL[chr19--chr2]""]" chr19:4423395-chr2:27133553 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CGGBP1--NVL 1 0 1.0 0.0 ONLY_REF_SPLICE CGGBP1^ENSG00000163320.12 chr3:88140970:- NVL^ENSG00000143748.18 chr1:224268133:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1102:3500:7572 . YES_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chr3--chr1]""]" chr3:88140970-chr1:224268133 False 0 Read count too low: 1 < 5 FAIL 1
CFP--POM121 1 0 0.5 0.0 ONLY_REF_SPLICE CFP^ENSG00000126759.14 chrX:47627141:- POM121^ENSG00000196313.11 chr7:72941837:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1251:52007:25564 . NO_LDAS 0.0051 GT 1.7232 AG 1.9656 "[""INTERCHROMOSOMAL[chrX--chr7]""]" chrX:47627141-chr7:72941837 False 0 Read count too low: 1 < 5 FAIL 1
CFLAR--ARHGAP31 1 0 1.0 0.0 INCL_NON_REF_SPLICE CFLAR^ENSG00000003402.20 chr2:201165163:+ ARHGAP31^ENSG00000031081.11 chr3:119414021:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1338:13337:19034 . YES_LDAS 0.0102 GC 1.7056 AG 1.8256 "[""INTERCHROMOSOMAL[chr2--chr3]""]" chr2:201165163-chr3:119414021 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CFAP46--GPC4 1 0 1.0 0.0 INCL_NON_REF_SPLICE CFAP46^ENSG00000171811.14 chr10:132908468:- GPC4^ENSG00000076716.9 chrX:133415438:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1181:32988:20589 . NO_LDAS 0.0102 GT 1.9086 AG 1.8256 "[""INTERCHROMOSOMAL[chr10--chrX]""]" chr10:132908468-chrX:133415438 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CERT1--TTC37 1 0 1.0 0.0 ONLY_REF_SPLICE CERT1^ENSG00000113163.18 chr5:75505982:- TTC37^ENSG00000198677.12 chr5:95491036:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1228:51498:29053 . YES_LDAS 0.0102 GT 1.9656 AG 1.8892 "[""INTRACHROMOSOMAL[chr5:19.95Mb]""]" chr5:75505982-chr5:95491036 False 0 Read count too low: 1 < 5 FAIL 1
CERNA2--VPS52 1 0 1.0 0.0 INCL_NON_REF_SPLICE CERNA2^ENSG00000285972.1 chr10:84171722:- VPS52^ENSG00000223501.9 chr6:33267307:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1434:18806:24723 . YES_LDAS 0.0102 GT 1.9329 AG 1.7232 "[""INTERCHROMOSOMAL[chr10--chr6]""]" chr10:84171722-chr6:33267307 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CEP350--NLRP1 1 0 1.0 0.0 INCL_NON_REF_SPLICE CEP350^ENSG00000135837.16 chr1:180094333:+ NLRP1^ENSG00000091592.16 chr17:5502229:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1194:22115:25690 . NO_LDAS 0.0102 GT 1.053 AG 1.8892 "[""INTERCHROMOSOMAL[chr1--chr17]""]" chr1:180094333-chr17:5502229 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CEP192--SSR3 1 0 1.0 0.0 INCL_NON_REF_SPLICE CEP192^ENSG00000101639.18 chr18:13056201:+ SSR3^ENSG00000114850.7 chr3:156540578:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1178:31257:17983 . YES_LDAS 0.0102 GT 1.7232 AG 1.8295 "[""INTERCHROMOSOMAL[chr18--chr3]""]" chr18:13056201-chr3:156540578 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CEP192--DDAH2 1 0 1.0 0.0 INCL_NON_REF_SPLICE CEP192^ENSG00000101639.18 chr18:13117597:+ DDAH2^ENSG00000213722.10 chr6:31729106:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2222:24388:16035 . NO_LDAS 0.0102 GT 1.8062 AG 1.9086 "[""INTERCHROMOSOMAL[chr18--chr6]""]" chr18:13117597-chr6:31729106 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CENPK--SYNPO 1 0 1.0 0.0 ONLY_REF_SPLICE CENPK^ENSG00000123219.13 chr5:65521475:- SYNPO^ENSG00000171992.13 chr5:150656404:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2205:13637:15741 . NO_LDAS 0.0102 GT 1.8062 AG 1.5058 "[""INTRACHROMOSOMAL[chr5:85.04Mb]""]" chr5:65521475-chr5:150656404 False 0 Read count too low: 1 < 5 FAIL 1
CELF2--USP6NL 1 0 1.0 0.0 ONLY_REF_SPLICE CELF2^ENSG00000048740.18 chr10:11165682:+ USP6NL^ENSG00000148429.14 chr10:11597717:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1369:14138:22943 . YES_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTRACHROMOSOMAL[chr10:0.12Mb]""]" chr10:11165682-chr10:11597717 False 0 Read count too low: 1 < 5 FAIL 1
CELF2--HBS1L 1 0 1.0 0.0 ONLY_REF_SPLICE CELF2^ENSG00000048740.18 chr10:11288552:+ HBS1L^ENSG00000112339.15 chr6:135002842:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2358:27948:23882 . NO_LDAS 0.0102 GT 1.7232 AG 1.8295 "[""INTERCHROMOSOMAL[chr10--chr6]""]" chr10:11288552-chr6:135002842 False 0 Read count too low: 1 < 5 FAIL 1
CELF1--RRP15 1 0 1.0 0.0 ONLY_REF_SPLICE CELF1^ENSG00000149187.18 chr11:47472191:- RRP15^ENSG00000067533.6 chr1:218330948:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2410:39800:6717 . YES_LDAS 0.0102 GT 1.8323 AG 1.8295 "[""INTERCHROMOSOMAL[chr11--chr1]""]" chr11:47472191-chr1:218330948 False 0 Read count too low: 1 < 5 FAIL 1
CDYL--CORO1C 1 0 1.0 0.0 ONLY_REF_SPLICE CDYL^ENSG00000153046.18 chr6:4776807:+ CORO1C^ENSG00000110880.11 chr12:108701323:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1318:11315:6283 . NO_LDAS 0.0102 GT 1.7968 AG 1.7819 "[""INTERCHROMOSOMAL[chr6--chr12]""]" chr6:4776807-chr12:108701323 False 0 Read count too low: 1 < 5 FAIL 1
CDV3--NSA2P6 1 0 1.0 0.0 INCL_NON_REF_SPLICE CDV3^ENSG00000091527.16 chr3:133575115:+ NSA2P6^ENSG00000250980.1 chr4:152796772:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2420:40374:1126 . NO_LDAS 0.0102 GT 1.7968 AG 0.9183 "[""INTERCHROMOSOMAL[chr3--chr4]""]" chr3:133575115-chr4:152796772 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CDR2--NPIPB12 1 0 0.25 0.0 ONLY_REF_SPLICE CDR2^ENSG00000140743.8 chr16:22374231:- NPIPB12^ENSG00000169203.16 chr16:29487399:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1459:49516:21584 . YES_LDAS 0.0026 GT 1.8256 AG 1.8892 "[""INTRACHROMOSOMAL[chr16:7.05Mb]""]" chr16:22374231-chr16:29487399 False 0 Read count too low: 1 < 5 FAIL 1
CDPF1--MUC12 1 0 1.0 0.0 INCL_NON_REF_SPLICE CDPF1^ENSG00000205643.11 chr22:46245096:- MUC12^ENSG00000205277.9 chr7:101017575:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2330:41863:10823 . YES_LDAS 0.0102 GT 1.7819 AG 1.9086 "[""INTERCHROMOSOMAL[chr22--chr7]""]" chr22:46245096-chr7:101017575 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CDKN1A--ILF3 1 0 1.0 0.0 ONLY_REF_SPLICE CDKN1A^ENSG00000124762.14 chr6:36678798:+ ILF3^ENSG00000129351.17 chr19:10689179:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2450:33263:22215 . YES_LDAS 0.0102 GT 1.7819 AG 1.9899 "[""INTERCHROMOSOMAL[chr6--chr19]""]" chr6:36678798-chr19:10689179 False 0 Read count too low: 1 < 5 FAIL 1
CDKN1A--B2M 1 0 1.0 0.0 ONLY_REF_SPLICE CDKN1A^ENSG00000124762.14 chr6:36678798:+ B2M^ENSG00000166710.21 chr15:44715423:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1393:36556:6002 . YES_LDAS 0.0102 GT 1.7819 AG 1.9329 "[""INTERCHROMOSOMAL[chr6--chr15]""]" chr6:36678798-chr15:44715423 False 0 Read count too low: 1 < 5 FAIL 1
CDK5RAP2--LBX1 1 0 1.0 0.0 INCL_NON_REF_SPLICE CDK5RAP2^ENSG00000136861.18 chr9:120422693:- LBX1^ENSG00000138136.6 chr10:101229304:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2459:27301:21276 . NO_LDAS 0.0102 GT 1.7819 AG 0.9183 "[""INTERCHROMOSOMAL[chr9--chr10]""]" chr9:120422693-chr10:101229304 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CDK14--HADH 1 0 1.0 0.0 ONLY_REF_SPLICE CDK14^ENSG00000058091.17 chr7:91118208:+ HADH^ENSG00000138796.17 chr4:108009759:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1383:14850:9323 . YES_LDAS 0.0102 GT 1.7819 AG 1.9899 "[""INTERCHROMOSOMAL[chr7--chr4]""]" chr7:91118208-chr4:108009759 False 0 Read count too low: 1 < 5 FAIL 1
CDK14--ANKIB1 1 0 1.0 0.0 ONLY_REF_SPLICE CDK14^ENSG00000058091.17 chr7:90604249:+ ANKIB1^ENSG00000001629.10 chr7:92294889:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2214:14955:17016 . YES_LDAS 0.0102 GT 1.9899 AG 1.5656 "[""INTRACHROMOSOMAL[chr7:1.04Mb]""]" chr7:90604249-chr7:92294889 False 0 Read count too low: 1 < 5 FAIL 1
CD83--AL009177.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE CD83^ENSG00000112149.10 chr6:14118065:+ AL009177.1^ENSG00000286277.1 chr6:14431780:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2290:11331:22565 . YES_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTRACHROMOSOMAL[chr6:0.29Mb]""]" chr6:14118065-chr6:14431780 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
CD81--UBA7 1 0 1.0 0.0 ONLY_REF_SPLICE CD81^ENSG00000110651.12 chr11:2377615:+ UBA7^ENSG00000182179.13 chr3:49811455:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1442:11250:5358 . NO_LDAS 0.0102 GT 1.8295 AG 1.9329 "[""INTERCHROMOSOMAL[chr11--chr3]""]" chr11:2377615-chr3:49811455 False 0 Read count too low: 1 < 5 FAIL 1
CD79B--KPNB1 1 0 1.0 0.0 ONLY_REF_SPLICE CD79B^ENSG00000007312.13 chr17:63932195:- KPNB1^ENSG00000108424.11 chr17:47664159:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2470:44427:13975 . YES_LDAS 0.0102 GT 1.8256 AG 1.7968 "[""INTRACHROMOSOMAL[chr17:16.24Mb]""]" chr17:63932195-chr17:47664159 False 0 Read count too low: 1 < 5 FAIL 1
CD53--WDR92 1 0 1.0 0.0 ONLY_REF_SPLICE CD53^ENSG00000143119.14 chr1:110873248:+ WDR92^ENSG00000243667.7 chr2:68131445:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1157:28110:3032 . YES_LDAS 0.0102 GT 1.8892 AG 1.8256 "[""INTERCHROMOSOMAL[chr1--chr2]""]" chr1:110873248-chr2:68131445 False 0 Read count too low: 1 < 5 FAIL 1
CD48--SQSTM1 1 0 1.0 0.0 ONLY_REF_SPLICE CD48^ENSG00000117091.10 chr1:160711682:- SQSTM1^ENSG00000161011.20 chr5:179836436:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1392:37696:11313 . YES_LDAS 0.0102 GT 1.9656 AG 1.7056 "[""INTERCHROMOSOMAL[chr1--chr5]""]" chr1:160711682-chr5:179836436 False 0 Read count too low: 1 < 5 FAIL 1
CD48--AC120024.4 1 0 1.0 0.0 INCL_NON_REF_SPLICE CD48^ENSG00000117091.10 chr1:160681004:- AC120024.4^ENSG00000279273.1 chr17:80464887:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1251:47971:18796 . NO_LDAS 0.0102 GC 1.9329 AG 1.7819 "[""INTERCHROMOSOMAL[chr1--chr17]""]" chr1:160681004-chr17:80464887 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CD38--FBXL5 1 0 1.0 0.0 ONLY_REF_SPLICE CD38^ENSG00000004468.13 chr4:15778647:+ FBXL5^ENSG00000118564.15 chr4:15644657:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1330:31354:2065 . YES_LDAS 0.0102 GT 1.9899 AG 1.7232 "[""INTRACHROMOSOMAL[chr4:0.10Mb]"",""LOCAL_INVERSION:+:-:[96596]""]" chr4:15778647-chr4:15644657 False 0 Read count too low: 1 < 5 FAIL 1
CD320--VAV1 1 0 1.0 0.0 ONLY_REF_SPLICE CD320^ENSG00000167775.11 chr19:8305031:- VAV1^ENSG00000141968.8 chr19:6836432:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1227:14308:10038 . YES_LDAS 0.0102 GT 1.6895 AG 1.9656 "[""INTRACHROMOSOMAL[chr19:1.44Mb]""]" chr19:8305031-chr19:6836432 False 0 Read count too low: 1 < 5 FAIL 1
CD27--RPS16 1 0 1.0 0.0 INCL_NON_REF_SPLICE CD27^ENSG00000139193.4 chr12:6445560:+ RPS16^ENSG00000105193.9 chr19:39433761:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1249:15821:14003 . YES_LDAS 0.0102 GT 1.9086 AG 1.9329 "[""INTERCHROMOSOMAL[chr12--chr19]""]" chr12:6445560-chr19:39433761 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CD22--TNFAIP8 1 0 1.0 0.0 ONLY_REF_SPLICE CD22^ENSG00000012124.17 chr19:35329230:+ TNFAIP8^ENSG00000145779.8 chr5:119392816:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1303:3289:12252 . YES_LDAS 0.0102 GT 1.5656 AG 1.9899 "[""INTERCHROMOSOMAL[chr19--chr5]""]" chr19:35329230-chr5:119392816 False 0 Read count too low: 1 < 5 FAIL 1
CD22--RBM39 1 0 1.0 0.0 ONLY_REF_SPLICE CD22^ENSG00000012124.17 chr19:35332924:+ RBM39^ENSG00000131051.24 chr20:35713096:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2375:3759:20043 . YES_LDAS 0.0102 GT 1.9086 AG 1.9329 "[""INTERCHROMOSOMAL[chr19--chr20]""]" chr19:35332924-chr20:35713096 False 0 Read count too low: 1 < 5 FAIL 1
CD22--MRPL20 1 0 1.0 0.0 ONLY_REF_SPLICE CD22^ENSG00000012124.17 chr19:35329230:+ MRPL20^ENSG00000242485.6 chr1:1405886:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1475:48076:12252 . YES_LDAS 0.0102 GT 1.5656 AG 1.9656 "[""INTERCHROMOSOMAL[chr19--chr1]""]" chr19:35329230-chr1:1405886 False 0 Read count too low: 1 < 5 FAIL 1
CD22--AL035587.2 1 0 1.0 0.0 ONLY_REF_SPLICE CD22^ENSG00000012124.17 chr19:35332074:+ AL035587.2^ENSG00000287825.1 chr6:42928646:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2223:19405:21696 . YES_LDAS 0.0102 GT 1.5656 AG 1.8256 "[""INTERCHROMOSOMAL[chr19--chr6]""]" chr19:35332074-chr6:42928646 False 0 Read count too low: 1 < 5 FAIL 1
CCT8--AP5Z1 1 0 1.0 0.0 INCL_NON_REF_SPLICE CCT8^ENSG00000156261.13 chr21:29062490:- AP5Z1^ENSG00000242802.9 chr7:4783402:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1466:49864:11593 . NO_LDAS 0.0102 GT 1.8892 AG 1.5546 "[""INTERCHROMOSOMAL[chr21--chr7]""]" chr21:29062490-chr7:4783402 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CCT7--SEC16A 1 0 1.0 0.0 ONLY_REF_SPLICE CCT7^ENSG00000135624.16 chr2:73234384:+ SEC16A^ENSG00000148396.18 chr9:136461274:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2377:33538:15517 . YES_LDAS 0.0102 GT 1.9656 AG 1.8323 "[""INTERCHROMOSOMAL[chr2--chr9]""]" chr2:73234384-chr9:136461274 False 0 Read count too low: 1 < 5 FAIL 1
CCS--CLK2 1 0 1.0 0.0 ONLY_REF_SPLICE CCS^ENSG00000173992.9 chr11:66600549:+ CLK2^ENSG00000176444.19 chr1:155266895:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1212:47000:26699 . YES_LDAS 0.0102 GT 1.9086 AG 1.9086 "[""INTERCHROMOSOMAL[chr11--chr1]""]" chr11:66600549-chr1:155266895 False 0 Read count too low: 1 < 5 FAIL 1
CCR6--EDEM1 1 0 1.0 0.0 ONLY_REF_SPLICE CCR6^ENSG00000112486.17 chr6:167123223:+ EDEM1^ENSG00000134109.11 chr3:5195209:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2189:11088:4153 . YES_LDAS 0.0102 GT 1.9329 AG 1.7819 "[""INTERCHROMOSOMAL[chr6--chr3]""]" chr6:167123223-chr3:5195209 False 0 Read count too low: 1 < 5 FAIL 1
CCNL2--GUK1 1 0 1.0 0.0 INCL_NON_REF_SPLICE CCNL2^ENSG00000221978.12 chr1:1387235:- GUK1^ENSG00000143774.17 chr1:228145511:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1491:9050:25479 . YES_LDAS 0.0102 GT 1.8062 AG 1.8323 "[""INTRACHROMOSOMAL[chr1:226.74Mb]""]" chr1:1387235-chr1:228145511 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CCNL2--AGO2 1 0 1.0 0.0 INCL_NON_REF_SPLICE CCNL2^ENSG00000221978.12 chr1:1387235:- AGO2^ENSG00000123908.12 chr8:140585311:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1137:51732:25676 . YES_LDAS 0.0102 GT 1.8062 AG 1.7968 "[""INTERCHROMOSOMAL[chr1--chr8]""]" chr1:1387235-chr8:140585311 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CCNK--AC004687.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE CCNK^ENSG00000090061.17 chr14:99502366:+ AC004687.1^ENSG00000265206.5 chr17:58331497:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1380:27438:20421 . NO_LDAS 0.0102 GT 1.9086 AG 1.6895 "[""INTERCHROMOSOMAL[chr14--chr17]""]" chr14:99502366-chr17:58331497 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CCNE1--FGR 1 0 1.0 0.0 ONLY_REF_SPLICE CCNE1^ENSG00000105173.14 chr19:29822603:+ FGR^ENSG00000000938.13 chr1:27613350:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1433:8952:12084 . YES_LDAS 0.0102 GT 1.8323 AG 1.8892 "[""INTERCHROMOSOMAL[chr19--chr1]""]" chr19:29822603-chr1:27613350 False 0 Read count too low: 1 < 5 FAIL 1
CCM2--XRCC5 1 0 1.0 0.0 ONLY_REF_SPLICE CCM2^ENSG00000136280.17 chr7:45000363:+ XRCC5^ENSG00000079246.16 chr2:216125917:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2472:7504:14760 . YES_LDAS 0.0102 GT 1.2729 AG 1.7819 "[""INTERCHROMOSOMAL[chr7--chr2]""]" chr7:45000363-chr2:216125917 False 0 Read count too low: 1 < 5 FAIL 1
CCM2--OGDH 1 0 1.0 0.0 ONLY_REF_SPLICE CCM2^ENSG00000136280.17 chr7:45000363:+ OGDH^ENSG00000105953.15 chr7:44624317:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1256:39525:27539 . NO_LDAS 0.0102 GT 1.2729 AG 1.8892 "[""DEEPEST2019"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:0.29Mb]""]" chr7:45000363-chr7:44624317 False 0 Read count too low: 1 < 5 FAIL 1
CCK--FLOT2 1 0 1.0 0.0 INCL_NON_REF_SPLICE CCK^ENSG00000187094.12 chr3:42264881:- FLOT2^ENSG00000132589.16 chr17:28883231:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2492:6194:19104 . NO_LDAS 0.0102 GT 1.7465 AG 1.9086 "[""INTERCHROMOSOMAL[chr3--chr17]""]" chr3:42264881-chr17:28883231 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CCDC91--ZNF337 1 0 1.0 0.0 ONLY_REF_SPLICE CCDC91^ENSG00000123106.10 chr12:28259442:+ ZNF337^ENSG00000130684.14 chr20:25677037:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1477:9155:24569 . YES_LDAS 0.0102 GT 1.7819 AG 1.8295 "[""INTERCHROMOSOMAL[chr12--chr20]""]" chr12:28259442-chr20:25677037 False 0 Read count too low: 1 < 5 FAIL 1
CCDC88A--PHF21A 1 0 1.0 0.0 ONLY_REF_SPLICE CCDC88A^ENSG00000115355.17 chr2:55362308:- PHF21A^ENSG00000135365.16 chr11:46092223:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2101:22430:28590 . NO_LDAS 0.0102 GT 1.8892 AG 1.7232 "[""INTERCHROMOSOMAL[chr2--chr11]""]" chr2:55362308-chr11:46092223 False 0 Read count too low: 1 < 5 FAIL 1
CCDC8--PYCR3 1 0 1.0 0.0 INCL_NON_REF_SPLICE CCDC8^ENSG00000169515.8 chr19:46412649:- PYCR3^ENSG00000104524.14 chr8:143606679:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1337:33918:8833 . NO_LDAS 0.0102 GT 1.7819 AG 1.7232 "[""INTERCHROMOSOMAL[chr19--chr8]""]" chr19:46412649-chr8:143606679 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CCDC78--SMC3 1 0 1.0 0.0 ONLY_REF_SPLICE CCDC78^ENSG00000162004.18 chr16:722922:- SMC3^ENSG00000108055.10 chr10:110568938:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1120:51571:17745 . YES_LDAS 0.0102 GT 1.7819 AG 1.9086 "[""INTERCHROMOSOMAL[chr16--chr10]""]" chr16:722922-chr10:110568938 False 0 Read count too low: 1 < 5 FAIL 1
CCDC69--LINC01184 1 0 1.0 0.0 ONLY_REF_SPLICE CCDC69^ENSG00000198624.13 chr5:151223923:- LINC01184^ENSG00000245937.8 chr5:127941220:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1187:32001:2485 . YES_LDAS 0.0102 GT 1.3996 AG 1.9086 "[""INTRACHROMOSOMAL[chr5:23.10Mb]""]" chr5:151223923-chr5:127941220 False 0 Read count too low: 1 < 5 FAIL 1
CCDC32--VEZT 1 0 1.0 0.0 ONLY_REF_SPLICE CCDC32^ENSG00000128891.16 chr15:40557216:- VEZT^ENSG00000028203.18 chr12:95251940:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1396:22649:24373 . YES_LDAS 0.0102 GT 1.8256 AG 1.5656 "[""INTERCHROMOSOMAL[chr15--chr12]""]" chr15:40557216-chr12:95251940 False 0 Read count too low: 1 < 5 FAIL 1
CCDC32--TTBK2 1 0 1.0 0.0 ONLY_REF_SPLICE CCDC32^ENSG00000128891.16 chr15:40557216:- TTBK2^ENSG00000128881.17 chr15:42878684:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1275:49087:28604 . YES_LDAS 0.0102 GT 1.8256 AG 1.8295 "[""INTRACHROMOSOMAL[chr15:2.17Mb]""]" chr15:40557216-chr15:42878684 False 0 Read count too low: 1 < 5 FAIL 1
CCDC32--GOLM2 1 0 0.5 0.0 ONLY_REF_SPLICE CCDC32^ENSG00000128891.16 chr15:40557216:- GOLM2^ENSG00000166734.20 chr15:44413336:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2104:9438:24190 . YES_LDAS 0.0051 GT 1.8256 AG 1.6895 "[""INTRACHROMOSOMAL[chr15:3.72Mb]""]" chr15:40557216-chr15:44413336 False 0 Read count too low: 1 < 5 FAIL 1
CCDC30--ATG13 1 0 1.0 0.0 ONLY_REF_SPLICE CCDC30^ENSG00000186409.18 chr1:42580981:+ ATG13^ENSG00000175224.16 chr11:46644279:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2364:15044:16273 . NO_LDAS 0.0102 GT 1.9656 AG 1.9086 "[""INTERCHROMOSOMAL[chr1--chr11]""]" chr1:42580981-chr11:46644279 False 0 Read count too low: 1 < 5 FAIL 1
CCDC198--YTHDC1 1 0 1.0 0.0 ONLY_REF_SPLICE CCDC198^ENSG00000100557.10 chr14:57493493:- YTHDC1^ENSG00000083896.13 chr4:68314323:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1188:9648:10991 . YES_LDAS 0.0102 GT 1.8892 AG 1.7819 "[""INTERCHROMOSOMAL[chr14--chr4]""]" chr14:57493493-chr4:68314323 False 0 Read count too low: 1 < 5 FAIL 1
CCDC144A--NAB2 1 0 0.33 0.0 INCL_NON_REF_SPLICE CCDC144A^ENSG00000170160.17 chr17:16761583:+ NAB2^ENSG00000166886.13 chr12:57093063:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2390:32122:27357 . NO_LDAS 0.0034 GT 1.6729 AG 1.7819 "[""INTERCHROMOSOMAL[chr17--chr12]""]" chr17:16761583-chr12:57093063 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CCDC142--STAMBP 1 0 1.0 0.0 ONLY_REF_SPLICE CCDC142^ENSG00000135637.14 chr2:74483068:- STAMBP^ENSG00000124356.16 chr2:73859254:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2268:49055:13079 . YES_LDAS 0.0102 GT 1.7465 AG 1.5329 "[""INTRACHROMOSOMAL[chr2:0.60Mb]""]" chr2:74483068-chr2:73859254 False 0 Read count too low: 1 < 5 FAIL 1
CBX5--SMG5 1 0 0.33 0.0 INCL_NON_REF_SPLICE CBX5^ENSG00000094916.16 chr12:54257588:- SMG5^ENSG00000198952.8 chr1:156267552:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1111:28708:7348 . NO_LDAS 0.0034 GT 1.5301 AG 1.8295 "[""INTERCHROMOSOMAL[chr12--chr1]""]" chr12:54257588-chr1:156267552 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CBLN3--SLC35E2A 1 0 0.5 0.0 ONLY_REF_SPLICE CBLN3^ENSG00000139899.11 chr14:24430739:- SLC35E2A^ENSG00000215790.8 chr1:1739704:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1435:18426:15208 . YES_LDAS 0.0051 GT 1.2867 AG 1.7819 "[""INTERCHROMOSOMAL[chr14--chr1]""]" chr14:24430739-chr1:1739704 False 0 Read count too low: 1 < 5 FAIL 1
CATSPERE--PPP1R21 1 0 1.0 0.0 ONLY_REF_SPLICE CATSPERE^ENSG00000179397.18 chr1:244479784:+ PPP1R21^ENSG00000162869.16 chr2:48451008:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1132:26920:10837 . YES_LDAS 0.0102 GT 1.8256 AG 1.9899 "[""INTERCHROMOSOMAL[chr1--chr2]""]" chr1:244479784-chr2:48451008 False 0 Read count too low: 1 < 5 FAIL 1
CATSPER4--AC087276.2 1 0 0.5 0.0 INCL_NON_REF_SPLICE CATSPER4^ENSG00000188782.9 chr1:26197746:+ AC087276.2^ENSG00000254907.1 chr11:43328760:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1374:35124:21654 . NO_LDAS 0.0051 AT 1.8295 AC 1.7819 "[""INTERCHROMOSOMAL[chr1--chr11]""]" chr1:26197746-chr11:43328760 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CASK--KLHL15 1 0 1.0 0.0 ONLY_REF_SPLICE CASK^ENSG00000147044.23 chrX:41922930:- KLHL15^ENSG00000174010.9 chrX:24006700:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1390:13022:15685 . YES_LDAS 0.0102 GT 1.8323 AG 1.8892 "[""INTRACHROMOSOMAL[chrX:17.49Mb]""]" chrX:41922930-chrX:24006700 False 0 Read count too low: 1 < 5 FAIL 1
CARMIL1--CUL4A 1 0 1.0 0.0 ONLY_REF_SPLICE CARMIL1^ENSG00000079691.18 chr6:25284909:+ CUL4A^ENSG00000139842.15 chr13:113218945:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2354:45770:14648 . YES_LDAS 0.0102 GT 1.7968 AG 1.9899 "[""INTERCHROMOSOMAL[chr6--chr13]""]" chr6:25284909-chr13:113218945 False 0 Read count too low: 1 < 5 FAIL 1
CAPZA2--C18orf54 1 0 1.0 0.0 INCL_NON_REF_SPLICE CAPZA2^ENSG00000198898.14 chr7:116862650:+ C18orf54^ENSG00000166845.15 chr18:54361749:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1372:13022:6016 . YES_LDAS 0.0102 GT 1.7819 AG 1.9329 "[""INTERCHROMOSOMAL[chr7--chr18]""]" chr7:116862650-chr18:54361749 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CAPN10--APBB3 1 0 1.0 0.0 INCL_NON_REF_SPLICE CAPN10^ENSG00000142330.20 chr2:240592150:+ APBB3^ENSG00000113108.20 chr5:140562739:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2329:44015:24246 . YES_LDAS 0.0102 GT 1.8062 AG 1.6895 "[""INTERCHROMOSOMAL[chr2--chr5]""]" chr2:240592150-chr5:140562739 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CANX--MAPK9 1 0 1.0 0.0 ONLY_REF_SPLICE CANX^ENSG00000127022.16 chr5:179699102:+ MAPK9^ENSG00000050748.18 chr5:180269409:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2192:40366:29081 . NO_LDAS 0.0102 GT 1.7465 AG 1.9219 "[""INTRACHROMOSOMAL[chr5:0.50Mb]""]" chr5:179699102-chr5:180269409 False 0 Read count too low: 1 < 5 FAIL 1
CAND1--RORA 1 0 1.0 0.0 ONLY_REF_SPLICE CAND1^ENSG00000111530.13 chr12:67269785:+ RORA^ENSG00000069667.16 chr15:60531851:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1258:17334:17072 . YES_LDAS 0.0102 GT 1.9656 AG 1.6895 "[""INTERCHROMOSOMAL[chr12--chr15]""]" chr12:67269785-chr15:60531851 False 0 Read count too low: 1 < 5 FAIL 1
CAMTA2--RCBTB1 1 0 1.0 0.0 ONLY_REF_SPLICE CAMTA2^ENSG00000108509.21 chr17:4979385:- RCBTB1^ENSG00000136144.12 chr13:49549648:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1475:48415:5918 . NO_LDAS 0.0102 GT 1.9329 AG 1.7465 "[""INTERCHROMOSOMAL[chr17--chr13]""]" chr17:4979385-chr13:49549648 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
CACUL1--KIF3A 1 0 1.0 0.0 ONLY_REF_SPLICE CACUL1^ENSG00000151893.15 chr10:118729295:- KIF3A^ENSG00000131437.16 chr5:132703619:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2446:51975:24078 . YES_LDAS 0.0102 GT 1.9086 AG 1.5546 "[""INTERCHROMOSOMAL[chr10--chr5]""]" chr10:118729295-chr5:132703619 False 0 Read count too low: 1 < 5 FAIL 1
CACNB4--RMND5A 1 0 1.0 0.0 ONLY_REF_SPLICE CACNB4^ENSG00000182389.20 chr2:152098330:- RMND5A^ENSG00000153561.13 chr2:86765027:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1266:47825:23223 . YES_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""INTRACHROMOSOMAL[chr2:65.05Mb]""]" chr2:152098330-chr2:86765027 False 0 Read count too low: 1 < 5 FAIL 1
C8orf76--SGMS1 1 0 1.0 0.0 ONLY_REF_SPLICE C8orf76^ENSG00000189376.12 chr8:123241230:- SGMS1^ENSG00000198964.14 chr10:50344345:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1249:4066:7067 . YES_LDAS 0.0102 GT 1.8323 AG 1.8892 "[""INTERCHROMOSOMAL[chr8--chr10]""]" chr8:123241230-chr10:50344345 False 0 Read count too low: 1 < 5 FAIL 1
C8orf44--MROH1 1 0 1.0 0.0 ONLY_REF_SPLICE C8orf44^ENSG00000288596.2 chr8:66680024:+ MROH1^ENSG00000179832.17 chr8:144247301:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2478:7990:4307 . YES_LDAS 0.0102 GT 1.8892 AG 1.5301 "[""INTRACHROMOSOMAL[chr8:77.46Mb]""]" chr8:66680024-chr8:144247301 False 0 Read count too low: 1 < 5 FAIL 1
C5orf24--NSD1 1 0 1.0 0.0 ONLY_REF_SPLICE C5orf24^ENSG00000181904.9 chr5:134855327:+ NSD1^ENSG00000165671.21 chr5:177291954:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1488:43125:15026 . NO_LDAS 0.0102 GT 1.8062 AG 1.7819 "[""INTRACHROMOSOMAL[chr5:42.27Mb]""]" chr5:134855327-chr5:177291954 False 0 Read count too low: 1 < 5 FAIL 1
C5orf24--DDX42 1 0 1.0 0.0 ONLY_REF_SPLICE C5orf24^ENSG00000181904.9 chr5:134855327:+ DDX42^ENSG00000198231.13 chr17:63810513:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1414:26848:14382 . YES_LDAS 0.0102 GT 1.8062 AG 1.9656 "[""INTERCHROMOSOMAL[chr5--chr17]""]" chr5:134855327-chr17:63810513 False 0 Read count too low: 1 < 5 FAIL 1
C4orf47--CFAP97 1 0 1.0 0.0 ONLY_REF_SPLICE C4orf47^ENSG00000205129.8 chr4:185426396:+ CFAP97^ENSG00000164323.14 chr4:185164179:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2205:28474:8202 . YES_LDAS 0.0102 GT 1.9656 AG 1.8256 "[""INTRACHROMOSOMAL[chr4:0.22Mb]""]" chr4:185426396-chr4:185164179 False 0 Read count too low: 1 < 5 FAIL 1
C4orf33--SRGAP2 1 0 0.33 0.0 INCL_NON_REF_SPLICE C4orf33^ENSG00000151470.13 chr4:129094028:+ SRGAP2^ENSG00000266028.7 chr1:206203585:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2162:10012:26614 . YES_LDAS 0.0034 GT 1.9656 AG 1.231 "[""INTERCHROMOSOMAL[chr4--chr1]""]" chr4:129094028-chr1:206203585 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
C22orf39--UFD1 1 0 1.0 0.0 ONLY_REF_SPLICE C22orf39^ENSG00000242259.9 chr22:19447378:- UFD1^ENSG00000070010.19 chr22:19450744:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2280:34824:24975 . YES_LDAS 0.0102 GT 1.5656 AG 1.7968 "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr22:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[2200]""]" chr22:19447378-chr22:19450744 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
C22orf34--PATZ1 1 0 1.0 0.0 ONLY_REF_SPLICE C22orf34^ENSG00000188511.12 chr22:49657405:- PATZ1^ENSG00000100105.18 chr22:31335863:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1201:30181:24583 . NO_LDAS 0.0102 GT 1.9086 AG 1.9086 "[""INTRACHROMOSOMAL[chr22:18.07Mb]""]" chr22:49657405-chr22:31335863 False 0 Read count too low: 1 < 5 FAIL 1
C1S--PGBD2 1 0 1.0 0.0 ONLY_REF_SPLICE C1S^ENSG00000182326.15 chr12:6997342:+ PGBD2^ENSG00000185220.12 chr1:248917279:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1197:51441:12224 . YES_LDAS 0.0102 GT 1.9329 AG 1.8295 "[""INTERCHROMOSOMAL[chr12--chr1]""]" chr12:6997342-chr1:248917279 False 0 Read count too low: 1 < 5 FAIL 1
C19orf25--RABEP1 1 0 1.0 0.0 ONLY_REF_SPLICE C19orf25^ENSG00000119559.17 chr19:1478654:- RABEP1^ENSG00000029725.17 chr17:5308694:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2422:10215:7768 . YES_LDAS 0.0102 GT 1.8256 AG 1.7819 "[""INTERCHROMOSOMAL[chr19--chr17]""]" chr19:1478654-chr17:5308694 False 0 Read count too low: 1 < 5 FAIL 1
C19orf25--NDUFB1 1 0 1.0 0.0 ONLY_REF_SPLICE C19orf25^ENSG00000119559.17 chr19:1478774:- NDUFB1^ENSG00000183648.11 chr14:92117642:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1422:32106:17408 . NO_LDAS 0.0102 GT 1.8323 AG 1.9656 "[""INTERCHROMOSOMAL[chr19--chr14]""]" chr19:1478774-chr14:92117642 False 0 Read count too low: 1 < 5 FAIL 1
C12orf76--AGAP5 1 0 0.5 0.0 INCL_NON_REF_SPLICE C12orf76^ENSG00000174456.15 chr12:110044420:- AGAP5^ENSG00000172650.14 chr10:73697720:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1111:31370:17338 . NO_LDAS 0.0051 GT 1.9329 AG 1.9329 "[""INTERCHROMOSOMAL[chr12--chr10]""]" chr12:110044420-chr10:73697720 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
C12orf75--CTNNBL1 1 0 1.0 0.0 ONLY_REF_SPLICE C12orf75^ENSG00000235162.9 chr12:105348626:+ CTNNBL1^ENSG00000132792.19 chr20:37802867:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2362:48262:3410 . NO_LDAS 0.0102 GT 1.8892 AG 1.7968 "[""INTERCHROMOSOMAL[chr12--chr20]""]" chr12:105348626-chr20:37802867 False 0 Read count too low: 1 < 5 FAIL 1
BX890604.1--B2M 1 0 0.33 0.0 ONLY_REF_SPLICE BX890604.1^ENSG00000285756.2 chrX:3920194:- B2M^ENSG00000166710.21 chr15:44715423:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2175:31249:11047 . NO_LDAS 0.0034 GT 1.7819 AG 1.9329 "[""INTERCHROMOSOMAL[chrX--chr15]""]" chrX:3920194-chr15:44715423 False 0 Read count too low: 1 < 5 FAIL 1
BX890604.1--B2M 1 0 0.33 0.0 ONLY_REF_SPLICE BX890604.1^ENSG00000285756.2 chrX:3881765:- B2M^ENSG00000166710.21 chr15:44715423:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2175:31249:11047 . NO_LDAS 0.0034 GT 1.7819 AG 1.9329 "[""INTERCHROMOSOMAL[chrX--chr15]""]" chrX:3881765-chr15:44715423 False 0 Read count too low: 1 < 5 FAIL 1
BX890604.1--B2M 1 0 0.33 0.0 ONLY_REF_SPLICE BX890604.1^ENSG00000285756.2 chrX:3843341:- B2M^ENSG00000166710.21 chr15:44715423:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2175:31249:11047 . NO_LDAS 0.0034 GT 1.7819 AG 1.9329 "[""INTERCHROMOSOMAL[chrX--chr15]""]" chrX:3843341-chr15:44715423 False 0 Read count too low: 1 < 5 FAIL 1
BX571818.1--CLIC4 1 0 0.25 0.0 ONLY_REF_SPLICE BX571818.1^ENSG00000285417.1 chr1:206053265:+ CLIC4^ENSG00000169504.15 chr1:24797742:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1354:10579:24961 . YES_LDAS 0.0026 GT 1.9656 AG 1.7968 "[""INTRACHROMOSOMAL[chr1:181.19Mb]""]" chr1:206053265-chr1:24797742 False 0 Read count too low: 1 < 5 FAIL 1
BUB3--LINC02641 1 0 1.0 0.0 ONLY_REF_SPLICE BUB3^ENSG00000154473.18 chr10:123162828:+ LINC02641^ENSG00000230131.6 chr10:123449353:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2284:45147:17549 . YES_LDAS 0.0102 GT 1.1589 AG 1.6402 "[""INTRACHROMOSOMAL[chr10:0.19Mb]""]" chr10:123162828-chr10:123449353 False 0 Read count too low: 1 < 5 FAIL 1
BTF3L4P1--ALCAM 1 0 0.33 0.0 INCL_NON_REF_SPLICE BTF3L4P1^ENSG00000232260.2 chr21:17518618:- ALCAM^ENSG00000170017.12 chr3:105520067:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2453:14713:22957 . NO_LDAS 0.0034 GT 1.9656 AG 1.9086 "[""INTERCHROMOSOMAL[chr21--chr3]""]" chr21:17518618-chr3:105520067 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
BTBD9--ARID4B 1 0 1.0 0.0 ONLY_REF_SPLICE BTBD9^ENSG00000183826.18 chr6:38577600:- ARID4B^ENSG00000054267.22 chr1:235260752:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1142:12739:26152 . NO_LDAS 0.0102 GT 1.9086 AG 1.9329 "[""INTERCHROMOSOMAL[chr6--chr1]""]" chr6:38577600-chr1:235260752 False 0 Read count too low: 1 < 5 FAIL 1
BTBD2--KLF16 1 0 1.0 0.0 ONLY_REF_SPLICE BTBD2^ENSG00000133243.10 chr19:2015297:- KLF16^ENSG00000129911.9 chr19:1854760:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2195:19955:1070 . YES_LDAS 0.0102 GT 1.6729 AG 1.9329 "[""INTRACHROMOSOMAL[chr19:0.12Mb]""]" chr19:2015297-chr19:1854760 False 0 Read count too low: 1 < 5 FAIL 1
BSDC1--GSR 1 0 1.0 0.0 ONLY_REF_SPLICE BSDC1^ENSG00000160058.19 chr1:32368447:- GSR^ENSG00000104687.14 chr8:30712088:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1337:1178:19608 . YES_LDAS 0.0102 GT 1.7968 AG 1.5219 "[""INTERCHROMOSOMAL[chr1--chr8]""]" chr1:32368447-chr8:30712088 False 0 Read count too low: 1 < 5 FAIL 1
BRMS1L--LARP4B 1 0 1.0 0.0 ONLY_REF_SPLICE BRMS1L^ENSG00000100916.14 chr14:35834923:+ LARP4B^ENSG00000107929.15 chr10:817889:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1477:29291:25059 . NO_LDAS 0.0102 GT 1.9656 AG 1.5656 "[""INTERCHROMOSOMAL[chr14--chr10]""]" chr14:35834923-chr10:817889 False 0 Read count too low: 1 < 5 FAIL 1
BRINP2--RPL29 1 0 1.0 0.0 INCL_NON_REF_SPLICE BRINP2^ENSG00000198797.7 chr1:177280658:+ RPL29^ENSG00000162244.12 chr3:51993856:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1449:9527:16974 . NO_LDAS 0.0102 GT 1.8323 AG 1.5656 "[""INTERCHROMOSOMAL[chr1--chr3]""]" chr1:177280658-chr3:51993856 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
BRAF--MRPS33 1 0 1.0 0.0 ONLY_REF_SPLICE BRAF^ENSG00000157764.14 chr7:140924566:- MRPS33^ENSG00000090263.16 chr7:141010660:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2448:5215:18473 . NO_LDAS 0.0102 GT 1.8892 AG 1.8256 "[""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:0.08Mb]"",""LOCAL_REARRANGEMENT:-:[77681]""]" chr7:140924566-chr7:141010660 False 0 Read count too low: 1 < 5 FAIL 1
BOP1--PPP1R12C 1 0 1.0 0.0 ONLY_REF_SPLICE BOP1^ENSG00000261236.8 chr8:144276224:- PPP1R12C^ENSG00000125503.13 chr19:55096335:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1462:45293:16652 . YES_LDAS 0.0102 GT 1.8892 AG 1.7968 "[""INTERCHROMOSOMAL[chr8--chr19]""]" chr8:144276224-chr19:55096335 False 0 Read count too low: 1 < 5 FAIL 1
BMS1P1--PTPN20 1 0 0.33 0.0 ONLY_REF_SPLICE BMS1P1^ENSG00000204177.10 chr10:46798168:+ PTPN20^ENSG00000204179.10 chr10:46940623:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2122:3249:21626 . YES_LDAS 0.0034 GT 1.7465 AG 1.8062 "[""INTRACHROMOSOMAL[chr10:0.10Mb]"",""NEIGHBORS[99407]""]" chr10:46798168-chr10:46940623 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
BMPR2--RABGAP1L 1 0 1.0 0.0 ONLY_REF_SPLICE BMPR2^ENSG00000204217.15 chr2:202377550:+ RABGAP1L^ENSG00000152061.23 chr1:174957457:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2155:16233:9001 . YES_LDAS 0.0102 GT 1.9086 AG 1.7465 "[""INTERCHROMOSOMAL[chr2--chr1]""]" chr2:202377550-chr1:174957457 False 0 Read count too low: 1 < 5 FAIL 1
BMPR2--CLIP4 1 0 1.0 0.0 ONLY_REF_SPLICE BMPR2^ENSG00000204217.15 chr2:202377550:+ CLIP4^ENSG00000115295.20 chr2:29157204:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1496:50147:18417 . YES_LDAS 0.0102 GT 1.9086 AG 1.8062 "[""INTRACHROMOSOMAL[chr2:173.19Mb]""]" chr2:202377550-chr2:29157204 False 0 Read count too low: 1 < 5 FAIL 1
BMPR2--CHST11 1 0 1.0 0.0 ONLY_REF_SPLICE BMPR2^ENSG00000204217.15 chr2:202377550:+ CHST11^ENSG00000171310.11 chr12:104601906:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2186:45471:17689 . YES_LDAS 0.0102 GT 1.9086 AG 1.9656 "[""INTERCHROMOSOMAL[chr2--chr12]""]" chr2:202377550-chr12:104601906 False 0 Read count too low: 1 < 5 FAIL 1
BMP2K--YAP1 1 0 0.5 0.0 INCL_NON_REF_SPLICE BMP2K^ENSG00000138756.19 chr4:78871890:+ YAP1^ENSG00000137693.14 chr11:102205994:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2129:12795:5148 . NO_LDAS 0.0051 AT 1.8892 AC 1.8062 "[""INTERCHROMOSOMAL[chr4--chr11]""]" chr4:78871890-chr11:102205994 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
BMERB1--MRPS6 1 0 1.0 0.0 ONLY_REF_SPLICE BMERB1^ENSG00000166780.11 chr16:15434759:+ MRPS6^ENSG00000243927.6 chr21:34102835:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1470:2302:24443 . YES_LDAS 0.0102 GT 1.5628 AG 1.8295 "[""INTERCHROMOSOMAL[chr16--chr21]""]" chr16:15434759-chr21:34102835 False 0 Read count too low: 1 < 5 FAIL 1
BICD1--SPPL3 1 0 1.0 0.0 ONLY_REF_SPLICE BICD1^ENSG00000151746.15 chr12:32107544:+ SPPL3^ENSG00000157837.16 chr12:120810886:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2117:22932:24246 . YES_LDAS 0.0102 GT 1.7819 AG 1.8256 "[""INTRACHROMOSOMAL[chr12:88.38Mb]""]" chr12:32107544-chr12:120810886 False 0 Read count too low: 1 < 5 FAIL 1
BET1L--CNTRL 1 0 1.0 0.0 ONLY_REF_SPLICE BET1L^ENSG00000177951.17 chr11:205611:- CNTRL^ENSG00000119397.18 chr9:121144843:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2206:5490:20771 . YES_LDAS 0.0102 GT 1.9656 AG 1.8323 "[""INTERCHROMOSOMAL[chr11--chr9]""]" chr11:205611-chr9:121144843 False 0 Read count too low: 1 < 5 FAIL 1
BEST2--PTPN11 1 0 1.0 0.0 ONLY_REF_SPLICE BEST2^ENSG00000039987.7 chr19:12751974:+ PTPN11^ENSG00000179295.18 chr12:112482074:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1197:45422:16932 . NO_LDAS 0.0102 GT 1.2867 AG 1.7465 "[""INTERCHROMOSOMAL[chr19--chr12]""]" chr19:12751974-chr12:112482074 False 0 Read count too low: 1 < 5 FAIL 1
BEND3--RITA1 1 0 1.0 0.0 INCL_NON_REF_SPLICE BEND3^ENSG00000178409.14 chr6:107113896:- RITA1^ENSG00000139405.16 chr12:113191648:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2187:16144:14760 . YES_LDAS 0.0102 GT 1.9329 AG 1.4256 "[""INTERCHROMOSOMAL[chr6--chr12]""]" chr6:107113896-chr12:113191648 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
BCORL1--PATJ 1 0 1.0 0.0 ONLY_REF_SPLICE BCORL1^ENSG00000085185.16 chrX:130005317:+ PATJ^ENSG00000132849.21 chr1:62148284:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1387:14704:19468 . YES_LDAS 0.0102 GT 1.7819 AG 1.9899 "[""INTERCHROMOSOMAL[chrX--chr1]""]" chrX:130005317-chr1:62148284 False 0 Read count too low: 1 < 5 FAIL 1
BCL2L13--MIB1 1 0 1.0 0.0 ONLY_REF_SPLICE BCL2L13^ENSG00000099968.18 chr22:17655832:+ MIB1^ENSG00000101752.12 chr18:21765772:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1441:8354:14298 . YES_LDAS 0.0102 GT 1.7465 AG 1.9656 "[""INTERCHROMOSOMAL[chr22--chr18]""]" chr22:17655832-chr18:21765772 False 0 Read count too low: 1 < 5 FAIL 1
BCL11A--ZADH2 1 0 0.5 0.0 INCL_NON_REF_SPLICE BCL11A^ENSG00000119866.22 chr2:60508615:- ZADH2^ENSG00000180011.7 chr18:75202008:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2459:30181:12224 . NO_LDAS 0.0051 GT 1.9899 AG 1.6729 "[""INTERCHROMOSOMAL[chr2--chr18]""]" chr2:60508615-chr18:75202008 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
BCKDHB--AL359715.4 1 0 1.0 0.0 INCL_NON_REF_SPLICE BCKDHB^ENSG00000083123.15 chr6:80273221:+ AL359715.4^ENSG00000279022.1 chr6:80440685:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2302:11339:13443 . YES_LDAS 0.0102 GT 1.9899 AG 1.9656 "[""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[94460]""]" chr6:80273221-chr6:80440685 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
BCAS3--PPM1D 1 0 1.0 0.0 ONLY_REF_SPLICE BCAS3^ENSG00000141376.23 chr17:60689761:+ PPM1D^ENSG00000170836.12 chr17:60623521:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2398:41321:4783 . NO_LDAS 0.0102 GT 1.7819 AG 1.7819 "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr17:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[11173]""]" chr17:60689761-chr17:60623521 False 0 Read count too low: 1 < 5 FAIL 1
BBX--IL15 1 0 1.0 0.0 ONLY_REF_SPLICE BBX^ENSG00000114439.19 chr3:107645909:+ IL15^ENSG00000164136.17 chr4:141688822:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2411:39533:14354 . YES_LDAS 0.0102 GT 1.8892 AG 1.9656 "[""INTERCHROMOSOMAL[chr3--chr4]""]" chr3:107645909-chr4:141688822 False 0 Read count too low: 1 < 5 FAIL 1
BAZ2B--NPIPB11 1 0 0.14 0.0 ONLY_REF_SPLICE BAZ2B^ENSG00000123636.18 chr2:159615394:- NPIPB11^ENSG00000254206.5 chr16:29403840:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2205:33158:25900 . YES_LDAS 0.0014 GT 1.9086 AG 1.9656 "[""INTERCHROMOSOMAL[chr2--chr16]""]" chr2:159615394-chr16:29403840 False 0 Read count too low: 1 < 5 FAIL 1
BAZ1B--CNTN1 1 0 1.0 0.0 INCL_NON_REF_SPLICE BAZ1B^ENSG00000009954.11 chr7:73477791:- CNTN1^ENSG00000018236.15 chr12:41071760:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1245:48496:2163 . NO_LDAS 0.0102 GT 1.5329 AG 1.3383 "[""INTERCHROMOSOMAL[chr7--chr12]""]" chr7:73477791-chr12:41071760 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
BAZ1A--PPP2R5E 1 0 1.0 0.0 ONLY_REF_SPLICE BAZ1A^ENSG00000198604.11 chr14:34783762:- PPP2R5E^ENSG00000154001.14 chr14:63539692:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1406:30173:7586 . YES_LDAS 0.0102 GT 1.8256 AG 1.9656 "[""INTRACHROMOSOMAL[chr14:28.50Mb]""]" chr14:34783762-chr14:63539692 False 0 Read count too low: 1 < 5 FAIL 1
BAZ1A--BBC3 1 0 1.0 0.0 ONLY_REF_SPLICE BAZ1A^ENSG00000198604.11 chr14:34874492:- BBC3^ENSG00000105327.18 chr19:47228446:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2324:10805:10612 . NO_LDAS 0.0102 GT 1.8295 AG 1.4295 "[""INTERCHROMOSOMAL[chr14--chr19]""]" chr14:34874492-chr19:47228446 False 0 Read count too low: 1 < 5 FAIL 1
BARD1--ABO 1 0 1.0 0.0 INCL_NON_REF_SPLICE BARD1^ENSG00000138376.11 chr2:214728538:- ABO^ENSG00000175164.16 chr9:133261353:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1278:47784:21220 . NO_LDAS 0.0102 GT 0.0 AG 1.9656 "[""INTERCHROMOSOMAL[chr2--chr9]""]" chr2:214728538-chr9:133261353 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
BAMBI--STK10 1 0 1.0 0.0 INCL_NON_REF_SPLICE BAMBI^ENSG00000095739.11 chr10:28677884:+ STK10^ENSG00000072786.13 chr5:172057450:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2345:50276:22060 . YES_LDAS 0.0102 GT 0.971 AG 1.7819 "[""INTERCHROMOSOMAL[chr10--chr5]""]" chr10:28677884-chr5:172057450 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
BAHD1--FAM214A 1 0 1.0 0.0 ONLY_REF_SPLICE BAHD1^ENSG00000140320.12 chr15:40441268:+ FAM214A^ENSG00000047346.12 chr15:52678122:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1132:10643:16301 . NO_LDAS 0.0102 GT 1.5058 AG 1.8892 "[""INTRACHROMOSOMAL[chr15:12.11Mb]""]" chr15:40441268-chr15:52678122 False 0 Read count too low: 1 < 5 FAIL 1
BAG6--ZNF696 1 0 1.0 0.0 INCL_NON_REF_SPLICE BAG6^ENSG00000204463.13 chr6:31644525:- ZNF696^ENSG00000185730.8 chr8:143296758:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1284:40827:2864 . NO_LDAS 0.0102 GT 1.9329 AG 1.4566 "[""INTERCHROMOSOMAL[chr6--chr8]""]" chr6:31644525-chr8:143296758 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
B4GALT1--HMGB1 1 0 0.5 0.0 ONLY_REF_SPLICE B4GALT1^ENSG00000086062.13 chr9:33166758:- HMGB1^ENSG00000189403.15 chr13:30463694:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1194:46895:19959 . YES_LDAS 0.0051 GT 1.8062 AG 1.1033 "[""INTERCHROMOSOMAL[chr9--chr13]""]" chr9:33166758-chr13:30463694 False 0 Read count too low: 1 < 5 FAIL 1
B2M--SQSTM1 1 0 1.0 0.0 ONLY_REF_SPLICE B2M^ENSG00000166710.21 chr15:44711613:+ SQSTM1^ENSG00000161011.20 chr5:179822958:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1382:25925:25928 . YES_LDAS 0.0102 GT 1.9656 AG 1.7968 "[""INTERCHROMOSOMAL[chr15--chr5]""]" chr15:44711613-chr5:179822958 False 0 Read count too low: 1 < 5 FAIL 1
AVL9--HERPUD2 1 0 1.0 0.0 ONLY_REF_SPLICE AVL9^ENSG00000105778.19 chr7:32559464:+ HERPUD2^ENSG00000122557.11 chr7:35673278:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1479:15651:8413 . YES_LDAS 0.0102 GT 1.9086 AG 1.9086 "[""INTRACHROMOSOMAL[chr7:3.04Mb]""]" chr7:32559464-chr7:35673278 False 0 Read count too low: 1 < 5 FAIL 1
AVL9--FARSB 1 0 1.0 0.0 ONLY_REF_SPLICE AVL9^ENSG00000105778.19 chr7:32495802:+ FARSB^ENSG00000116120.11 chr2:222624479:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2203:42550:7418 . YES_LDAS 0.0102 GT 1.7819 AG 1.5546 "[""INTERCHROMOSOMAL[chr7--chr2]""]" chr7:32495802-chr2:222624479 False 0 Read count too low: 1 < 5 FAIL 1
ATXN7--THOC7 1 0 1.0 0.0 INCL_NON_REF_SPLICE ATXN7^ENSG00000163635.20 chr3:63999651:+ THOC7^ENSG00000163634.12 chr3:63839773:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1307:29016:3340 . NO_LDAS 0.0102 GT 1.9656 AG 1.8892 "[""Klijn_CellLines"",""INTRACHROMOSOMAL[chr3:0.00Mb]"",""NEIGHBORS_OVERLAP:+:-:[713]""]" chr3:63999651-chr3:63839773 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ATXN7--BABAM1 1 0 1.0 0.0 ONLY_REF_SPLICE ATXN7^ENSG00000163635.20 chr3:63913225:+ BABAM1^ENSG00000105393.16 chr19:17277384:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2478:28110:20183 . YES_LDAS 0.0102 GT 1.8295 AG 1.8892 "[""INTERCHROMOSOMAL[chr3--chr19]""]" chr3:63913225-chr19:17277384 False 0 Read count too low: 1 < 5 FAIL 1
ATXN1L--ELP1 1 0 1.0 0.0 INCL_NON_REF_SPLICE ATXN1L^ENSG00000224470.8 chr16:71851456:+ ELP1^ENSG00000070061.16 chr9:108911180:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1390:8564:9590 . YES_LDAS 0.0102 GT 1.9656 AG 1.7465 "[""INTERCHROMOSOMAL[chr16--chr9]""]" chr16:71851456-chr9:108911180 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ATXN1--JARID2 1 0 1.0 0.0 ONLY_REF_SPLICE ATXN1^ENSG00000124788.19 chr6:16761298:- JARID2^ENSG00000008083.14 chr6:15374117:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1439:19518:27918 . NO_LDAS 0.0102 GT 1.5656 AG 1.7465 "[""INTRACHROMOSOMAL[chr6:0.78Mb]""]" chr6:16761298-chr6:15374117 False 0 Read count too low: 1 < 5 FAIL 1
ATRIP--MTOR 1 0 1.0 0.0 ONLY_REF_SPLICE ATRIP^ENSG00000164053.21 chr3:48460799:+ MTOR^ENSG00000198793.13 chr1:11133197:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2362:1154:16680 . YES_LDAS 0.0102 GT 1.8892 AG 1.9329 "[""INTERCHROMOSOMAL[chr3--chr1]""]" chr3:48460799-chr1:11133197 False 0 Read count too low: 1 < 5 FAIL 1
ATPAF2--ABCA13 1 0 1.0 0.0 INCL_NON_REF_SPLICE ATPAF2^ENSG00000171953.16 chr17:18018212:- ABCA13^ENSG00000179869.15 chr7:48219354:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1209:3896:5064 . NO_LDAS 0.0102 GT 1.2729 AG 1.8295 "[""INTERCHROMOSOMAL[chr17--chr7]""]" chr17:18018212-chr7:48219354 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ATPAF1--EFCAB14 1 0 1.0 0.0 ONLY_REF_SPLICE ATPAF1^ENSG00000123472.12 chr1:46652581:- EFCAB14^ENSG00000159658.15 chr1:46691937:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2125:14009:16778 . YES_LDAS 0.0102 GT 1.8892 AG 1.9219 "[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[792]""]" chr1:46652581-chr1:46691937 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
ATP8B1--WDR43 1 0 1.0 0.0 ONLY_REF_SPLICE ATP8B1^ENSG00000081923.15 chr18:57731627:- WDR43^ENSG00000163811.12 chr2:28914069:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2363:19890:1070 . NO_LDAS 0.0102 GT 1.8295 AG 1.9329 "[""INTERCHROMOSOMAL[chr18--chr2]""]" chr18:57731627-chr2:28914069 False 0 Read count too low: 1 < 5 FAIL 1
ATP6V1H--TCEA1 1 0 1.0 0.0 ONLY_REF_SPLICE ATP6V1H^ENSG00000047249.18 chr8:53829444:- TCEA1^ENSG00000187735.14 chr8:54010492:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1398:48885:19959 . YES_LDAS 0.0102 GT 1.9329 AG 1.8892 "[""DEEPEST2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr8:0.12Mb]""]" chr8:53829444-chr8:54010492 False 0 Read count too low: 1 < 5 FAIL 1
ATP6V0A1--STAT5A 1 0 1.0 0.0 INCL_NON_REF_SPLICE ATP6V0A1^ENSG00000033627.17 chr17:42495716:+ STAT5A^ENSG00000126561.18 chr17:42299756:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1214:5013:27651 . YES_LDAS 0.0102 GT 1.9219 AG 1.8062 "[""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr17:0.15Mb]""]" chr17:42495716-chr17:42299756 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ATP5ME--MTRF1 1 0 1.0 0.0 INCL_NON_REF_SPLICE ATP5ME^ENSG00000169020.10 chr4:672504:- MTRF1^ENSG00000120662.16 chr13:41260915:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2186:4883:21458 . NO_LDAS 0.0102 GT 1.7968 AG 1.9329 "[""INTERCHROMOSOMAL[chr4--chr13]""]" chr4:672504-chr13:41260915 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ATP5F1B--GRIN3A 1 0 1.0 0.0 INCL_NON_REF_SPLICE ATP5F1B^ENSG00000110955.9 chr12:56645837:- GRIN3A^ENSG00000198785.7 chr9:101737733:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2318:1930:28114 . NO_LDAS 0.0102 GT 1.7819 AG 1.7465 "[""INTERCHROMOSOMAL[chr12--chr9]""]" chr12:56645837-chr9:101737733 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ATP2C1--MBNL1 1 0 1.0 0.0 ONLY_REF_SPLICE ATP2C1^ENSG00000017260.20 chr3:130894775:+ MBNL1^ENSG00000152601.17 chr3:152414941:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2479:15384:24905 . YES_LDAS 0.0102 GT 1.6895 AG 1.7819 "[""TumorFusionsNAR2018"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr3:21.23Mb]""]" chr3:130894775-chr3:152414941 False 0 Read count too low: 1 < 5 FAIL 1
ATP2B1--USP15 1 0 1.0 0.0 ONLY_REF_SPLICE ATP2B1^ENSG00000070961.16 chr12:89655679:- USP15^ENSG00000135655.16 chr12:62294179:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2447:28619:12995 . YES_LDAS 0.0102 GT 1.9086 AG 1.9899 "[""INTRACHROMOSOMAL[chr12:27.17Mb]""]" chr12:89655679-chr12:62294179 False 0 Read count too low: 1 < 5 FAIL 1
ATP1B3--TFDP2 1 0 1.0 0.0 ONLY_REF_SPLICE ATP1B3^ENSG00000069849.11 chr3:141907274:+ TFDP2^ENSG00000114126.18 chr3:142005544:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1248:39217:11397 . YES_LDAS 0.0102 GT 1.7968 AG 1.8892 "[""INTRACHROMOSOMAL[chr3:0.02Mb]"",""LOCAL_INVERSION:+:-:[17879]""]" chr3:141907274-chr3:142005544 False 0 Read count too low: 1 < 5 FAIL 1
ATP1B3--MPHOSPH8 1 0 1.0 0.0 ONLY_REF_SPLICE ATP1B3^ENSG00000069849.11 chr3:141907274:+ MPHOSPH8^ENSG00000196199.14 chr13:19671206:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1195:49265:3830 . YES_LDAS 0.0102 GT 1.7968 AG 1.8295 "[""INTERCHROMOSOMAL[chr3--chr13]""]" chr3:141907274-chr13:19671206 False 0 Read count too low: 1 < 5 FAIL 1
ATG13--UBR7 1 0 1.0 0.0 ONLY_REF_SPLICE ATG13^ENSG00000175224.16 chr11:46630100:+ UBR7^ENSG00000012963.15 chr14:93214929:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1335:6461:26825 . YES_LDAS 0.0102 GT 1.9656 AG 1.9329 "[""INTERCHROMOSOMAL[chr11--chr14]""]" chr11:46630100-chr14:93214929 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
ATF7IP--SNX25 1 0 1.0 0.0 ONLY_REF_SPLICE ATF7IP^ENSG00000171681.12 chr12:14365827:+ SNX25^ENSG00000109762.16 chr4:185247294:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1213:10465:11369 . NO_LDAS 0.0102 GT 1.7968 AG 1.9086 "[""INTERCHROMOSOMAL[chr12--chr4]""]" chr12:14365827-chr4:185247294 False 0 Read count too low: 1 < 5 FAIL 1
ATF6B--RBM39 1 0 1.0 0.0 ONLY_REF_SPLICE ATF6B^ENSG00000213676.13 chr6:32120771:- RBM39^ENSG00000131051.24 chr20:35713096:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1136:7068:24008 . YES_LDAS 0.0102 GT 1.5546 AG 1.9329 "[""Klijn_CellLines"",""INTERCHROMOSOMAL[chr6--chr20]""]" chr6:32120771-chr20:35713096 False 0 Read count too low: 1 < 5 FAIL 1
ATF5--STK25 1 0 1.0 0.0 INCL_NON_REF_SPLICE ATF5^ENSG00000169136.12 chr19:49930816:+ STK25^ENSG00000115694.15 chr2:241500257:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2123:12755:17016 . YES_LDAS 0.0102 GT 1.8062 AG 1.9086 "[""INTERCHROMOSOMAL[chr19--chr2]""]" chr19:49930816-chr2:241500257 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ATF1--LARP4 1 0 1.0 0.0 ONLY_REF_SPLICE ATF1^ENSG00000123268.9 chr12:50780238:+ LARP4^ENSG00000161813.22 chr12:50435488:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1417:35310:4461 . NO_LDAS 0.0102 GT 1.9329 AG 1.6402 "[""INTRACHROMOSOMAL[chr12:0.28Mb]""]" chr12:50780238-chr12:50435488 False 0 Read count too low: 1 < 5 FAIL 1
ATE1--ST3GAL1 1 0 1.0 0.0 ONLY_REF_SPLICE ATE1^ENSG00000107669.18 chr10:121927844:- ST3GAL1^ENSG00000008513.16 chr8:133545926:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2152:15975:20267 . YES_LDAS 0.0102 GT 1.8892 AG 1.8295 "[""INTERCHROMOSOMAL[chr10--chr8]""]" chr10:121927844-chr8:133545926 False 0 Read count too low: 1 < 5 FAIL 1
ATAD5--SSH2 1 0 1.0 0.0 ONLY_REF_SPLICE ATAD5^ENSG00000176208.9 chr17:30869646:+ SSH2^ENSG00000141298.19 chr17:29672129:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1420:45770:6829 . NO_LDAS 0.0102 GT 1.8892 AG 1.9899 "[""INTRACHROMOSOMAL[chr17:0.90Mb]""]" chr17:30869646-chr17:29672129 False 0 Read count too low: 1 < 5 FAIL 1
ATAD2B--ITSN2 1 0 1.0 0.0 ONLY_REF_SPLICE ATAD2B^ENSG00000119778.15 chr2:23867835:- ITSN2^ENSG00000198399.15 chr2:24328115:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2117:24631:3704 . YES_LDAS 0.0102 GT 1.6402 AG 1.8892 "[""TumorFusionsNAR2018"",""ChimerSeq"",""INTRACHROMOSOMAL[chr2:0.28Mb]""]" chr2:23867835-chr2:24328115 False 0 Read count too low: 1 < 5 FAIL 1
ASXL2--ADCY3 1 0 1.0 0.0 ONLY_REF_SPLICE ASXL2^ENSG00000143970.17 chr2:25878166:- ADCY3^ENSG00000138031.15 chr2:24872719:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1445:2497:11467 . NO_LDAS 0.0102 GT 1.5656 AG 1.9219 "[""INTRACHROMOSOMAL[chr2:0.81Mb]""]" chr2:25878166-chr2:24872719 False 0 Read count too low: 1 < 5 FAIL 1
ASPSCR1--KDM6B 1 0 1.0 0.0 ONLY_REF_SPLICE ASPSCR1^ENSG00000169696.16 chr17:81996846:+ KDM6B^ENSG00000132510.11 chr17:7845314:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1414:4139:10781 . YES_LDAS 0.0102 GT 1.371 AG 1.8256 "[""INTRACHROMOSOMAL[chr17:74.12Mb]""]" chr17:81996846-chr17:7845314 False 0 Read count too low: 1 < 5 FAIL 1
ASPSCR1--DDX5 1 0 1.0 0.0 ONLY_REF_SPLICE ASPSCR1^ENSG00000169696.16 chr17:81985607:+ DDX5^ENSG00000108654.16 chr17:64504842:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1354:33093:19706 . YES_LDAS 0.0102 GT 1.9329 AG 1.8256 "[""INTRACHROMOSOMAL[chr17:17.47Mb]""]" chr17:81985607-chr17:64504842 False 0 Read count too low: 1 < 5 FAIL 1
ASNS--KATNAL2 1 0 1.0 0.0 INCL_NON_REF_SPLICE ASNS^ENSG00000070669.17 chr7:97864454:- KATNAL2^ENSG00000167216.17 chr18:47098173:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1203:16250:11467 . YES_LDAS 0.0102 GT 1.8323 AG 1.9899 "[""INTERCHROMOSOMAL[chr7--chr18]""]" chr7:97864454-chr18:47098173 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ASMTL-AS1--SUPT6H 1 0 1.0 0.0 ONLY_REF_SPLICE ASMTL-AS1^ENSG00000236017.8 chrX:1412888:+ SUPT6H^ENSG00000109111.15 chr17:28673371:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1168:50511:25269 . YES_LDAS 0.0102 GT 1.9899 AG 1.9656 "[""INTERCHROMOSOMAL[chrY--chr17]""]" chrX:1412888-chr17:28673371 False 0 Read count too low: 1 < 5 FAIL 1
ASL--MTF1 1 0 1.0 0.0 INCL_NON_REF_SPLICE ASL^ENSG00000126522.17 chr7:66092663:+ MTF1^ENSG00000188786.10 chr1:37815356:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2112:37170:12588 . NO_LDAS 0.0102 GT 1.9329 AG 1.5301 "[""INTERCHROMOSOMAL[chr7--chr1]""]" chr7:66092663-chr1:37815356 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ASH1L--EIF4A2 1 0 0.5 0.0 ONLY_REF_SPLICE ASH1L^ENSG00000116539.14 chr1:155477886:- EIF4A2^ENSG00000156976.17 chr3:186787127:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2302:15651:6171 . YES_LDAS 0.0051 GT 1.9899 AG 1.5656 "[""INTERCHROMOSOMAL[chr1--chr3]""]" chr1:155477886-chr3:186787127 False 0 Read count too low: 1 < 5 FAIL 1
ASCC3--COQ3 1 0 1.0 0.0 ONLY_REF_SPLICE ASCC3^ENSG00000112249.14 chr6:100867908:- COQ3^ENSG00000132423.12 chr6:99383824:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1301:51967:25886 . YES_LDAS 0.0102 GT 1.9329 AG 1.9086 "[""INTRACHROMOSOMAL[chr6:1.11Mb]""]" chr6:100867908-chr6:99383824 False 0 Read count too low: 1 < 5 FAIL 1
ASB1--EPHB1 1 0 1.0 0.0 ONLY_REF_SPLICE ASB1^ENSG00000065802.12 chr2:238427119:+ EPHB1^ENSG00000154928.18 chr3:134951371:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1431:44459:19160 . YES_LDAS 0.0102 GT 1.5628 AG 1.7819 "[""INTERCHROMOSOMAL[chr2--chr3]""]" chr2:238427119-chr3:134951371 False 0 Read count too low: 1 < 5 FAIL 1
ARRDC1--LIMD2 1 0 1.0 0.0 ONLY_REF_SPLICE ARRDC1^ENSG00000197070.14 chr9:137605835:+ LIMD2^ENSG00000136490.9 chr17:63699348:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2184:47631:5652 . YES_LDAS 0.0102 GT 1.7819 AG 1.7819 "[""INTERCHROMOSOMAL[chr9--chr17]""]" chr9:137605835-chr17:63699348 False 0 Read count too low: 1 < 5 FAIL 1
ARNTL--EEF1D 1 0 1.0 0.0 ONLY_REF_SPLICE ARNTL^ENSG00000133794.20 chr11:13350070:+ EEF1D^ENSG00000104529.17 chr8:143586852:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2305:31095:13667 . YES_LDAS 0.0102 GT 1.9899 AG 1.8295 "[""INTERCHROMOSOMAL[chr11--chr8]""]" chr11:13350070-chr8:143586852 False 0 Read count too low: 1 < 5 FAIL 1
ARNTL--CERT1 1 0 1.0 0.0 INCL_NON_REF_SPLICE ARNTL^ENSG00000133794.20 chr11:13379484:+ CERT1^ENSG00000113163.18 chr5:75386034:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2440:10837:14424 . NO_LDAS 0.0102 GT 1.5628 AG 1.6402 "[""INTERCHROMOSOMAL[chr11--chr5]""]" chr11:13379484-chr5:75386034 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ARMC8--TNIK 1 0 1.0 0.0 ONLY_REF_SPLICE ARMC8^ENSG00000114098.18 chr3:138187599:+ TNIK^ENSG00000154310.17 chr3:171369685:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2107:2294:16049 . YES_LDAS 0.0102 GT 1.9329 AG 1.7819 "[""INTRACHROMOSOMAL[chr3:32.76Mb]""]" chr3:138187599-chr3:171369685 False 0 Read count too low: 1 < 5 FAIL 1
ARL3--CTCF 1 0 1.0 0.0 ONLY_REF_SPLICE ARL3^ENSG00000138175.9 chr10:102685816:- CTCF^ENSG00000102974.16 chr16:67571148:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2481:44581:28646 . YES_LDAS 0.0102 GT 1.7232 AG 1.9656 "[""INTERCHROMOSOMAL[chr10--chr16]""]" chr10:102685816-chr16:67571148 False 0 Read count too low: 1 < 5 FAIL 1
ARIH1--C19orf71 1 0 1.0 0.0 ONLY_REF_SPLICE ARIH1^ENSG00000166233.15 chr15:72572380:+ C19orf71^ENSG00000183397.5 chr19:3543235:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1406:46757:23532 . YES_LDAS 0.0102 GT 1.9329 AG 1.9656 "[""INTERCHROMOSOMAL[chr15--chr19]""]" chr15:72572380-chr19:3543235 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
ARID3A--MFSD10 1 0 1.0 0.0 ONLY_REF_SPLICE ARID3A^ENSG00000116017.11 chr19:932742:+ MFSD10^ENSG00000109736.15 chr4:2933944:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2442:35488:29123 . YES_LDAS 0.0102 GT 1.9086 AG 1.8062 "[""INTERCHROMOSOMAL[chr19--chr4]""]" chr19:932742-chr4:2933944 False 0 Read count too low: 1 < 5 FAIL 1
ARHGEF7--TACC1 1 0 1.0 0.0 ONLY_REF_SPLICE ARHGEF7^ENSG00000102606.18 chr13:111153991:+ TACC1^ENSG00000147526.20 chr8:38831125:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1268:35860:20631 . YES_LDAS 0.0102 GT 1.7819 AG 1.5628 "[""INTERCHROMOSOMAL[chr13--chr8]""]" chr13:111153991-chr8:38831125 False 0 Read count too low: 1 < 5 FAIL 1
ARHGEF7--OSBPL3 1 0 1.0 0.0 ONLY_REF_SPLICE ARHGEF7^ENSG00000102606.18 chr13:111153991:+ OSBPL3^ENSG00000070882.13 chr7:24892621:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1398:29614:25395 . YES_LDAS 0.0102 GT 1.7819 AG 1.6402 "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr13--chr7]""]" chr13:111153991-chr7:24892621 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
ARHGEF7--NAXD 1 0 1.0 0.0 ONLY_REF_SPLICE ARHGEF7^ENSG00000102606.18 chr13:111153991:+ NAXD^ENSG00000213995.12 chr13:110622216:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2417:20732:12560 . YES_LDAS 0.0102 GT 1.7819 AG 1.8256 "[""INTRACHROMOSOMAL[chr13:0.47Mb]""]" chr13:111153991-chr13:110622216 False 0 Read count too low: 1 < 5 FAIL 1
ARHGEF35-AS1--IKZF1 1 0 0.5 0.0 ONLY_REF_SPLICE ARHGEF35-AS1^ENSG00000244198.7 chr7:144239388:+ IKZF1^ENSG00000185811.19 chr7:50319048:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2384:12350:5218 . YES_LDAS 0.0051 GT 1.9329 AG 1.8892 "[""INTRACHROMOSOMAL[chr7:93.79Mb]""]" chr7:144239388-chr7:50319048 False 0 Read count too low: 1 < 5 FAIL 1
ARHGEF18--CEP170 1 0 0.5 0.0 INCL_NON_REF_SPLICE ARHGEF18^ENSG00000104880.19 chr19:7458620:+ CEP170^ENSG00000143702.16 chr1:243191220:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1134:48504:2878 . NO_LDAS 0.0051 AT 1.7968 AC 1.9656 "[""INTERCHROMOSOMAL[chr19--chr1]""]" chr19:7458620-chr1:243191220 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ARHGAP5--SCFD1 1 0 1.0 0.0 ONLY_REF_SPLICE ARHGAP5^ENSG00000100852.13 chr14:32077435:+ SCFD1^ENSG00000092108.22 chr14:30734790:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1250:51765:20407 . YES_LDAS 0.0102 GT 1.9656 AG 1.3996 "[""INTRACHROMOSOMAL[chr14:1.34Mb]""]" chr14:32077435-chr14:30734790 False 0 Read count too low: 1 < 5 FAIL 1
ARHGAP26--HELLS 1 0 1.0 0.0 ONLY_REF_SPLICE ARHGAP26^ENSG00000145819.18 chr5:143056086:+ HELLS^ENSG00000119969.15 chr10:94588229:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2208:45827:19875 . YES_LDAS 0.0102 GT 1.7968 AG 1.5301 "[""INTERCHROMOSOMAL[chr5--chr10]""]" chr5:143056086-chr10:94588229 False 0 Read count too low: 1 < 5 FAIL 1
ARHGAP18--WDR7 1 0 1.0 0.0 ONLY_REF_SPLICE ARHGAP18^ENSG00000146376.11 chr6:129629353:- WDR7^ENSG00000091157.14 chr18:56779431:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2240:3184:28408 . YES_LDAS 0.0102 GT 1.9329 AG 1.7819 "[""INTERCHROMOSOMAL[chr6--chr18]""]" chr6:129629353-chr18:56779431 False 0 Read count too low: 1 < 5 FAIL 1
ARFGEF2--ZFAS1 1 0 1.0 0.0 ONLY_REF_SPLICE ARFGEF2^ENSG00000124198.10 chr20:48922010:+ ZFAS1^ENSG00000177410.13 chr20:49289045:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1401:44508:21766 . NO_LDAS 0.0102 GT 1.6895 AG 1.8323 "[""INTRACHROMOSOMAL[chr20:0.24Mb]""]" chr20:48922010-chr20:49289045 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
ARF6--NOL4 1 0 0.25 0.0 INCL_NON_REF_SPLICE ARF6^ENSG00000165527.7 chr14:49893916:+ NOL4^ENSG00000101746.16 chr18:34223064:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2114:3896:24316 . NO_LDAS 0.0026 GT 1.8892 AG 1.7056 "[""INTERCHROMOSOMAL[chr14--chr18]""]" chr14:49893916-chr18:34223064 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ARF6--F8A1 1 0 0.25 0.0 INCL_NON_REF_SPLICE ARF6^ENSG00000165527.7 chr14:49893916:+ F8A1^ENSG00000277203.1 chrX:154886777:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2114:3896:24316 . NO_LDAS 0.0026 GT 1.8892 AG 1.5628 "[""INTERCHROMOSOMAL[chr14--chrX]""]" chr14:49893916-chrX:154886777 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ARCN1--SEC31A 1 0 1.0 0.0 ONLY_REF_SPLICE ARCN1^ENSG00000095139.14 chr11:118572550:+ SEC31A^ENSG00000138674.17 chr4:82829058:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2322:1607:24975 . YES_LDAS 0.0102 GT 1.7232 AG 1.9656 "[""INTERCHROMOSOMAL[chr11--chr4]""]" chr11:118572550-chr4:82829058 False 0 Read count too low: 1 < 5 FAIL 1
ARAP2--XPO4 1 0 1.0 0.0 ONLY_REF_SPLICE ARAP2^ENSG00000047365.12 chr4:36210390:- XPO4^ENSG00000132953.17 chr13:20822289:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2186:5668:25760 . NO_LDAS 0.0102 GT 1.8892 AG 1.8295 "[""INTERCHROMOSOMAL[chr4--chr13]""]" chr4:36210390-chr13:20822289 False 0 Read count too low: 1 < 5 FAIL 1
ARAF--ARHGAP27 1 0 1.0 0.0 INCL_NON_REF_SPLICE ARAF^ENSG00000078061.14 chrX:47567131:+ ARHGAP27^ENSG00000159314.11 chr17:45404324:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1190:49160:11047 . NO_LDAS 0.0102 GT 1.5329 AG 1.7465 "[""INTERCHROMOSOMAL[chrX--chr17]""]" chrX:47567131-chr17:45404324 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AQR--PLEKHM2 1 0 1.0 0.0 ONLY_REF_SPLICE AQR^ENSG00000021776.11 chr15:34884525:- PLEKHM2^ENSG00000116786.13 chr1:15719734:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2161:11412:1715 . YES_LDAS 0.0102 GT 1.9656 AG 1.8892 "[""INTERCHROMOSOMAL[chr15--chr1]""]" chr15:34884525-chr1:15719734 False 0 Read count too low: 1 < 5 FAIL 1
APTX--B4GALT1 1 0 1.0 0.0 ONLY_REF_SPLICE APTX^ENSG00000137074.20 chr9:32984631:- B4GALT1^ENSG00000086062.13 chr9:33135424:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1335:2683:14620 . YES_LDAS 0.0102 GT 1.9899 AG 1.9086 "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr9:0.08Mb]"",""LOCAL_REARRANGEMENT:-:[78952]""]" chr9:32984631-chr9:33135424 False 0 Read count too low: 1 < 5 FAIL 1
APOLD1--CEP170 1 0 1.0 0.0 ONLY_REF_SPLICE APOLD1^ENSG00000178878.13 chr12:12726096:+ CEP170^ENSG00000143702.16 chr1:243225321:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1297:34355:8609 . YES_LDAS 0.0102 GT 1.9656 AG 1.9086 "[""INTERCHROMOSOMAL[chr12--chr1]""]" chr12:12726096-chr1:243225321 False 0 Read count too low: 1 < 5 FAIL 1
API5--GPATCH2L 1 0 1.0 0.0 ONLY_REF_SPLICE API5^ENSG00000166181.13 chr11:43312196:+ GPATCH2L^ENSG00000089916.18 chr14:76166663:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1164:41523:5526 . YES_LDAS 0.0102 GT 1.7465 AG 1.9656 "[""INTERCHROMOSOMAL[chr11--chr14]""]" chr11:43312196-chr14:76166663 False 0 Read count too low: 1 < 5 FAIL 1
APEH--RANBP2 1 0 1.0 0.0 INCL_NON_REF_SPLICE APEH^ENSG00000164062.13 chr3:49681780:+ RANBP2^ENSG00000153201.16 chr2:108764019:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1125:41312:24807 . NO_LDAS 0.0102 GT 1.6895 AG 1.9219 "[""INTERCHROMOSOMAL[chr3--chr2]""]" chr3:49681780-chr2:108764019 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
APC2--GATAD2A 1 0 1.0 0.0 INCL_NON_REF_SPLICE APC2^ENSG00000115266.12 chr19:1470833:+ GATAD2A^ENSG00000167491.17 chr19:19494294:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1332:33514:3844 . NO_LDAS 0.0102 GT 1.4566 AG 1.9086 "[""INTRACHROMOSOMAL[chr19:17.91Mb]""]" chr19:1470833-chr19:19494294 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AP5M1--MARCHF6 1 0 1.0 0.0 ONLY_REF_SPLICE AP5M1^ENSG00000053770.12 chr14:57269388:+ MARCHF6^ENSG00000145495.16 chr5:10429893:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1457:33206:22761 . YES_LDAS 0.0102 GT 1.9899 AG 1.9329 "[""INTERCHROMOSOMAL[chr14--chr5]""]" chr14:57269388-chr5:10429893 False 0 Read count too low: 1 < 5 FAIL 1
AP3B1--PSMD1 1 0 1.0 0.0 INCL_NON_REF_SPLICE AP3B1^ENSG00000132842.14 chr5:78116126:- PSMD1^ENSG00000173692.14 chr2:231148542:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1438:48731:11537 . YES_LDAS 0.0102 GT 1.8892 AG 1.7968 "[""INTERCHROMOSOMAL[chr5--chr2]""]" chr5:78116126-chr2:231148542 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AP003396.3--CLOCK 1 0 1.0 0.0 INCL_NON_REF_SPLICE AP003396.3^ENSG00000254740.2 chr11:119381487:+ CLOCK^ENSG00000134852.15 chr4:55450131:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2139:26516:7334 . NO_LDAS 0.0102 GT 1.7819 AG 1.7465 "[""INTERCHROMOSOMAL[chr11--chr4]""]" chr11:119381487-chr4:55450131 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AP001432.1--ZBTB2 1 0 1.0 0.0 ONLY_REF_SPLICE AP001432.1^ENSG00000242553.1 chr21:37221597:+ ZBTB2^ENSG00000181472.5 chr6:151373649:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1248:25221:29641 . YES_LDAS 0.0102 GT 1.8062 AG 1.2867 "[""INTERCHROMOSOMAL[chr21--chr6]""]" chr21:37221597-chr6:151373649 False 0 Read count too low: 1 < 5 FAIL 1
AP001029.1--PRELID3A 1 0 1.0 0.0 ONLY_REF_SPLICE AP001029.1^ENSG00000267108.1 chr18:12433000:+ PRELID3A^ENSG00000141391.14 chr18:12420325:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2293:51514:25550 . YES_LDAS 0.0102 GT 1.9219 AG 1.7465 "[""INTRACHROMOSOMAL[chr18:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[659]""]" chr18:12433000-chr18:12420325 False 0 Read count too low: 1 < 5 FAIL 1
AOPEP--CENPP 1 0 1.0 0.0 ONLY_REF_SPLICE AOPEP^ENSG00000148120.17 chr9:95005616:+ CENPP^ENSG00000188312.14 chr9:92379763:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2216:31952:25297 . YES_LDAS 0.0102 GT 1.5656 AG 1.231 "[""INTRACHROMOSOMAL[chr9:2.11Mb]""]" chr9:95005616-chr9:92379763 False 0 Read count too low: 1 < 5 FAIL 1
ANXA5--RPL3P10 1 0 1.0 0.0 INCL_NON_REF_SPLICE ANXA5^ENSG00000164111.15 chr4:121696581:- RPL3P10^ENSG00000243095.1 chr8:39158174:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1331:31038:4657 . NO_LDAS 0.0102 GT 1.9086 AG 1.9086 "[""INTERCHROMOSOMAL[chr4--chr8]""]" chr4:121696581-chr8:39158174 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ANXA11--NCK2 1 0 1.0 0.0 ONLY_REF_SPLICE ANXA11^ENSG00000122359.18 chr10:80205343:- NCK2^ENSG00000071051.14 chr2:105855048:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1108:29404:22313 . YES_LDAS 0.0102 GT 1.8323 AG 1.8295 "[""INTERCHROMOSOMAL[chr10--chr2]""]" chr10:80205343-chr2:105855048 False 0 Read count too low: 1 < 5 FAIL 1
ANPEP--MAML3 1 0 0.17 0.0 INCL_NON_REF_SPLICE ANPEP^ENSG00000166825.15 chr15:89804827:- MAML3^ENSG00000196782.12 chr4:139889956:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1210:8580:14914 . NO_LDAS 0.0017 GT 1.7819 AG 1.585 "[""INTERCHROMOSOMAL[chr15--chr4]""]" chr15:89804827-chr4:139889956 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ANPEP--HTT 1 0 0.17 0.0 INCL_NON_REF_SPLICE ANPEP^ENSG00000166825.15 chr15:89804827:- HTT^ENSG00000197386.13 chr4:3074889:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1210:8580:14914 . NO_LDAS 0.0017 GT 1.7819 AG 1.585 "[""INTERCHROMOSOMAL[chr15--chr4]""]" chr15:89804827-chr4:3074889 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ANP32B--CYB5R3 1 0 1.0 0.0 ONLY_REF_SPLICE ANP32B^ENSG00000136938.9 chr9:97983609:+ CYB5R3^ENSG00000100243.21 chr22:42636846:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2477:15513:26502 . YES_LDAS 0.0102 GT 1.6895 AG 1.8323 "[""INTERCHROMOSOMAL[chr9--chr22]""]" chr9:97983609-chr22:42636846 False 0 Read count too low: 1 < 5 FAIL 1
ANO6--EIF4B 1 0 1.0 0.0 ONLY_REF_SPLICE ANO6^ENSG00000177119.17 chr12:45270524:+ EIF4B^ENSG00000063046.18 chr12:53027782:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2117:40779:21136 . YES_LDAS 0.0102 GT 1.8295 AG 1.9329 "[""INTRACHROMOSOMAL[chr12:7.52Mb]""]" chr12:45270524-chr12:53027782 False 0 Read count too low: 1 < 5 FAIL 1
ANO5--UBE3A 1 0 1.0 0.0 ONLY_REF_SPLICE ANO5^ENSG00000171714.12 chr11:22193532:+ UBE3A^ENSG00000114062.22 chr15:25411971:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2204:39589:14031 . NO_LDAS 0.0102 GT 1.6729 AG 1.6895 "[""INTERCHROMOSOMAL[chr11--chr15]""]" chr11:22193532-chr15:25411971 False 0 Read count too low: 1 < 5 FAIL 1
ANLN--SPIN1 1 0 1.0 0.0 ONLY_REF_SPLICE ANLN^ENSG00000011426.11 chr7:36390044:+ SPIN1^ENSG00000106723.17 chr9:88448941:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1374:7844:18796 . YES_LDAS 0.0102 GT 1.9656 AG 1.9656 "[""INTERCHROMOSOMAL[chr7--chr9]""]" chr7:36390044-chr9:88448941 False 0 Read count too low: 1 < 5 FAIL 1
ANKRD52--PRKCZ 1 0 1.0 0.0 INCL_NON_REF_SPLICE ANKRD52^ENSG00000139645.11 chr12:56257015:- PRKCZ^ENSG00000067606.17 chr1:2111649:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2174:2116:6913 . NO_LDAS 0.0102 GT 1.8062 AG 1.7232 "[""INTERCHROMOSOMAL[chr12--chr1]""]" chr12:56257015-chr1:2111649 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ANKRD28--TMF1 1 0 1.0 0.0 ONLY_REF_SPLICE ANKRD28^ENSG00000206560.11 chr3:15766234:- TMF1^ENSG00000144747.17 chr3:69039009:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1219:30294:10963 . YES_LDAS 0.0102 GT 1.4256 AG 1.9899 "[""INTRACHROMOSOMAL[chr3:53.16Mb]""]" chr3:15766234-chr3:69039009 False 0 Read count too low: 1 < 5 FAIL 1
ANKRD27--UBE2D2 1 0 1.0 0.0 ONLY_REF_SPLICE ANKRD27^ENSG00000105186.16 chr19:32639356:- UBE2D2^ENSG00000131508.16 chr5:139600372:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1452:24081:6283 . NO_LDAS 0.0102 GT 1.7465 AG 1.8256 "[""INTERCHROMOSOMAL[chr19--chr5]""]" chr19:32639356-chr5:139600372 False 0 Read count too low: 1 < 5 FAIL 1
ANKRD10--ANKRD20A5P 1 0 1.0 0.0 ONLY_REF_SPLICE ANKRD10^ENSG00000088448.14 chr13:110906033:- ANKRD20A5P^ENSG00000186481.16 chr18:14234687:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1122:10659:28576 . YES_LDAS 0.0102 GT 1.8892 AG 1.7465 "[""INTERCHROMOSOMAL[chr13--chr18]""]" chr13:110906033-chr18:14234687 False 0 Read count too low: 1 < 5 FAIL 1
ANKLE2--DNAJC5 1 0 1.0 0.0 ONLY_REF_SPLICE ANKLE2^ENSG00000176915.15 chr12:132761618:- DNAJC5^ENSG00000101152.11 chr20:63928335:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1252:22681:2177 . YES_LDAS 0.0102 GT 1.3753 AG 1.9219 "[""INTERCHROMOSOMAL[chr12--chr20]""]" chr12:132761618-chr20:63928335 False 0 Read count too low: 1 < 5 FAIL 1
ANKIB1--ERCC6L2 1 0 1.0 0.0 ONLY_REF_SPLICE ANKIB1^ENSG00000001629.10 chr7:92319512:+ ERCC6L2^ENSG00000182150.18 chr9:95978061:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2451:28878:12658 . YES_LDAS 0.0102 GT 1.7968 AG 1.8892 "[""INTERCHROMOSOMAL[chr7--chr9]""]" chr7:92319512-chr9:95978061 False 0 Read count too low: 1 < 5 FAIL 1
ANKIB1--DCUN1D1 1 0 1.0 0.0 ONLY_REF_SPLICE ANKIB1^ENSG00000001629.10 chr7:92362273:+ DCUN1D1^ENSG00000043093.15 chr3:182965753:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1346:14462:10248 . YES_LDAS 0.0102 GT 1.6729 AG 1.7232 "[""INTERCHROMOSOMAL[chr7--chr3]""]" chr7:92362273-chr3:182965753 False 0 Read count too low: 1 < 5 FAIL 1
ANKFY1--UBE2G1 1 0 1.0 0.0 INCL_NON_REF_SPLICE ANKFY1^ENSG00000185722.18 chr17:4242256:- UBE2G1^ENSG00000132388.12 chr17:4366360:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1266:17204:10458 . NO_LDAS 0.0102 GT 1.7819 AG 1.7232 "[""DEEPEST2019"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr17:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[5264]""]" chr17:4242256-chr17:4366360 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ANKFY1--IST1 1 0 1.0 0.0 ONLY_REF_SPLICE ANKFY1^ENSG00000185722.18 chr17:4242256:- IST1^ENSG00000182149.21 chr16:71922474:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1167:26289:29025 . NO_LDAS 0.0102 GT 1.7819 AG 1.9219 "[""INTERCHROMOSOMAL[chr17--chr16]""]" chr17:4242256-chr16:71922474 False 0 Read count too low: 1 < 5 FAIL 1
ANAPC2--SURF6 1 0 1.0 0.0 ONLY_REF_SPLICE ANAPC2^ENSG00000176248.9 chr9:137181681:- SURF6^ENSG00000148296.7 chr9:133333806:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2496:50762:17997 . YES_LDAS 0.0102 GT 1.9656 AG 1.9086 "[""INTRACHROMOSOMAL[chr9:3.84Mb]""]" chr9:137181681-chr9:133333806 False 0 Read count too low: 1 < 5 FAIL 1
AMOTL1--TMEM123 1 0 1.0 0.0 ONLY_REF_SPLICE AMOTL1^ENSG00000166025.18 chr11:94768560:+ TMEM123^ENSG00000152558.15 chr11:102402206:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1329:37170:8272 . YES_LDAS 0.0102 GT 1.8892 AG 1.9086 "[""INTRACHROMOSOMAL[chr11:7.52Mb]""]" chr11:94768560-chr11:102402206 False 0 Read count too low: 1 < 5 FAIL 1
AMOTL1--EPB41 1 0 1.0 0.0 ONLY_REF_SPLICE AMOTL1^ENSG00000166025.18 chr11:94800311:+ EPB41^ENSG00000159023.22 chr1:29109336:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2231:13790:2443 . YES_LDAS 0.0102 GT 1.7465 AG 1.8892 "[""INTERCHROMOSOMAL[chr11--chr1]""]" chr11:94800311-chr1:29109336 False 0 Read count too low: 1 < 5 FAIL 1
AMACR--CNOT6 1 0 1.0 0.0 INCL_NON_REF_SPLICE AMACR^ENSG00000242110.8 chr5:33988992:- CNOT6^ENSG00000113300.13 chr5:180567114:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1187:23126:29431 . NO_LDAS 0.0102 GT 1.8892 AG 1.5546 "[""INTRACHROMOSOMAL[chr5:146.49Mb]""]" chr5:33988992-chr5:180567114 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ALOX12-AS1--RABEP1 1 0 1.0 0.0 ONLY_REF_SPLICE ALOX12-AS1^ENSG00000215067.10 chr17:7012196:- RABEP1^ENSG00000029725.17 chr17:5331949:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1231:29825:28674 . NO_LDAS 0.0102 GT 1.5058 AG 1.8323 "[""INTRACHROMOSOMAL[chr17:1.49Mb]""]" chr17:7012196-chr17:5331949 False 0 Read count too low: 1 < 5 FAIL 1
ALMS1--KMT5B 1 0 1.0 0.0 ONLY_REF_SPLICE ALMS1^ENSG00000116127.19 chr2:73419318:+ KMT5B^ENSG00000110066.15 chr11:68190152:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1305:16306:6044 . YES_LDAS 0.0102 GT 1.9086 AG 1.6402 "[""INTERCHROMOSOMAL[chr2--chr11]""]" chr2:73419318-chr11:68190152 False 0 Read count too low: 1 < 5 FAIL 1
ALDH3A2--MBNL1 1 0 1.0 0.0 ONLY_REF_SPLICE ALDH3A2^ENSG00000072210.19 chr17:19652632:+ MBNL1^ENSG00000152601.17 chr3:152414941:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1198:22503:21570 . YES_LDAS 0.0102 GT 1.9656 AG 1.7819 "[""INTERCHROMOSOMAL[chr17--chr3]""]" chr17:19652632-chr3:152414941 False 0 Read count too low: 1 < 5 FAIL 1
ALCAM--CBLB 1 0 1.0 0.0 ONLY_REF_SPLICE ALCAM^ENSG00000170017.12 chr3:105367481:+ CBLB^ENSG00000114423.23 chr3:105853664:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1150:24963:17030 . YES_LDAS 0.0102 GT 1.8892 AG 1.9656 "[""INTRACHROMOSOMAL[chr3:0.08Mb]"",""LOCAL_INVERSION:+:-:[78561]""]" chr3:105367481-chr3:105853664 False 0 Read count too low: 1 < 5 FAIL 1
AL928711.1--PAN3 1 0 1.0 0.0 ONLY_REF_SPLICE AL928711.1^ENSG00000259984.1 chr1:25337040:- PAN3^ENSG00000152520.14 chr13:28256292:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1231:44637:21066 . YES_LDAS 0.0102 GT 1.7968 AG 1.8323 "[""INTERCHROMOSOMAL[chr1--chr13]""]" chr1:25337040-chr13:28256292 False 0 Read count too low: 1 < 5 FAIL 1
AL596202.1--VAC14 1 0 1.0 0.0 INCL_NON_REF_SPLICE AL596202.1^ENSG00000235381.1 chr6:155254785:- VAC14^ENSG00000103043.15 chr16:70780862:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1305:21500:19804 . YES_LDAS 0.0102 GT 1.9219 AG 1.8892 "[""INTERCHROMOSOMAL[chr6--chr16]""]" chr6:155254785-chr16:70780862 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AL591518.1--PREP 1 0 1.0 0.0 ONLY_REF_SPLICE AL591518.1^ENSG00000284999.1 chr6:105830057:- PREP^ENSG00000085377.15 chr6:105397927:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1288:21120:11972 . NO_LDAS 0.0102 GT 1.7968 AG 1.9086 "[""INTRACHROMOSOMAL[chr6:0.23Mb]""]" chr6:105830057-chr6:105397927 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
AL591115.1--PREPL 1 0 1.0 0.0 INCL_NON_REF_SPLICE AL591115.1^ENSG00000286438.1 chr6:133062479:- PREPL^ENSG00000138078.16 chr2:44344586:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1233:36831:7376 . NO_LDAS 0.0102 GT 1.9329 AG 1.8256 "[""INTERCHROMOSOMAL[chr6--chr2]""]" chr6:133062479-chr2:44344586 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AL590764.1--RBM6 1 0 1.0 0.0 ONLY_REF_SPLICE AL590764.1^ENSG00000228427.3 chrX:71197909:- RBM6^ENSG00000004534.15 chr3:50048245:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1193:17350:26657 . YES_LDAS 0.0102 GT 1.9086 AG 1.9656 "[""INTERCHROMOSOMAL[chrX--chr3]""]" chrX:71197909-chr3:50048245 False 0 Read count too low: 1 < 5 FAIL 1
AL590068.4--DEPDC5 1 0 1.0 0.0 ONLY_REF_SPLICE AL590068.4^ENSG00000287420.1 chr10:30529842:+ DEPDC5^ENSG00000100150.20 chr22:31814992:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1145:19850:26811 . YES_LDAS 0.0102 GT 1.8892 AG 1.9219 "[""INTERCHROMOSOMAL[chr10--chr22]""]" chr10:30529842-chr22:31814992 False 0 Read count too low: 1 < 5 FAIL 1
AL512656.1--SIGMAR1 1 0 1.0 0.0 INCL_NON_REF_SPLICE AL512656.1^ENSG00000233144.1 chr10:73383326:+ SIGMAR1^ENSG00000147955.18 chr9:34635526:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1424:18960:27175 . NO_LDAS 0.0102 GT 1.5656 AG 1.9086 "[""INTERCHROMOSOMAL[chr10--chr9]""]" chr10:73383326-chr9:34635526 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AL392046.1--PTPN2 1 0 1.0 0.0 ONLY_REF_SPLICE AL392046.1^ENSG00000230534.6 chr10:35126568:- PTPN2^ENSG00000175354.20 chr18:12859254:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1257:30302:14956 . YES_LDAS 0.0102 GT 1.7056 AG 1.7465 "[""INTERCHROMOSOMAL[chr10--chr18]""]" chr10:35126568-chr18:12859254 False 0 Read count too low: 1 < 5 FAIL 1
AL365356.2--RPL23AP42 1 0 1.0 0.0 INCL_NON_REF_SPLICE AL365356.2^ENSG00000228685.1 chr10:5625040:+ RPL23AP42^ENSG00000234851.4 chr3:161429486:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2224:11881:10879 . NO_LDAS 0.0102 GT 1.2729 AG 1.8062 "[""INTERCHROMOSOMAL[chr10--chr3]""]" chr10:5625040-chr3:161429486 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AL356534.1--MYBL2 1 0 1.0 0.0 ONLY_REF_SPLICE AL356534.1^ENSG00000286215.1 chr6:126819392:- MYBL2^ENSG00000101057.16 chr20:43692157:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2494:19227:8833 . NO_LDAS 0.0102 GT 1.9329 AG 1.9656 "[""INTERCHROMOSOMAL[chr6--chr20]""]" chr6:126819392-chr20:43692157 False 0 Read count too low: 1 < 5 FAIL 1
AL356057.1--ASL 1 0 0.5 0.0 INCL_NON_REF_SPLICE AL356057.1^ENSG00000217488.2 chr6:75610994:- ASL^ENSG00000126522.17 chr7:66081803:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1251:45357:23041 . NO_LDAS 0.0051 GT 1.6895 AG 1.7465 "[""INTERCHROMOSOMAL[chr6--chr7]""]" chr6:75610994-chr7:66081803 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AL353622.1--MAP4K2 1 0 1.0 0.0 INCL_NON_REF_SPLICE AL353622.1^ENSG00000270605.1 chr1:28240679:- MAP4K2^ENSG00000168067.12 chr11:64797664:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2105:46773:8763 . YES_LDAS 0.0102 GT 1.8892 AG 1.9086 "[""INTERCHROMOSOMAL[chr1--chr11]""]" chr1:28240679-chr11:64797664 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AL162718.1--CLIC4 1 0 0.25 0.0 ONLY_REF_SPLICE AL162718.1^ENSG00000285424.1 chr6:4428383:- CLIC4^ENSG00000169504.15 chr1:24797742:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1354:10579:24961 . YES_LDAS 0.0026 GT 1.9656 AG 1.7968 "[""INTERCHROMOSOMAL[chr6--chr1]""]" chr6:4428383-chr1:24797742 False 0 Read count too low: 1 < 5 FAIL 1
AL162411.1--ETNK1 1 0 1.0 0.0 ONLY_REF_SPLICE AL162411.1^ENSG00000236924.1 chr9:6646085:+ ETNK1^ENSG00000139163.16 chr12:22643763:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1348:42623:17717 . YES_LDAS 0.0102 GT 1.7232 AG 1.9899 "[""INTERCHROMOSOMAL[chr9--chr12]""]" chr9:6646085-chr12:22643763 False 0 Read count too low: 1 < 5 FAIL 1
AL162253.2--PLGRKT 1 0 1.0 0.0 ONLY_REF_SPLICE AL162253.2^ENSG00000286162.2 chr9:5524536:- PLGRKT^ENSG00000107020.10 chr9:5361888:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1236:25828:12224 . YES_LDAS 0.0102 GT 1.8892 AG 1.9329 "[""INTRACHROMOSOMAL[chr9:0.02Mb]"",""NEIGHBORS[19552]""]" chr9:5524536-chr9:5361888 False 0 Read count too low: 1 < 5 FAIL 1
AL161669.1--COPS6 1 0 1.0 0.0 INCL_NON_REF_SPLICE AL161669.1^ENSG00000259444.1 chr14:103098632:+ COPS6^ENSG00000168090.10 chr7:100089290:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2297:42833:14326 . NO_LDAS 0.0102 GT 1.9219 AG 1.9656 "[""INTERCHROMOSOMAL[chr14--chr7]""]" chr14:103098632-chr7:100089290 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AL138895.2--SERF2 1 0 1.0 0.0 INCL_NON_REF_SPLICE AL138895.2^ENSG00000271214.1 chr9:114491568:+ SERF2^ENSG00000140264.21 chr15:43792975:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1322:33845:13107 . NO_LDAS 0.0102 GT 1.7465 AG 1.8892 "[""TCGA_StarF2019"",""INTERCHROMOSOMAL[chr9--chr15]""]" chr9:114491568-chr15:43792975 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
AL135905.2--IFRD2 1 0 1.0 0.0 INCL_NON_REF_SPLICE AL135905.2^ENSG00000285976.2 chr6:63581732:+ IFRD2^ENSG00000214706.11 chr3:50290472:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1135:6995:6451 . NO_LDAS 0.0102 GT 1.9656 AG 1.3753 "[""INTERCHROMOSOMAL[chr6--chr3]""]" chr6:63581732-chr3:50290472 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AL079338.1--CLIC4 1 0 0.25 0.0 ONLY_REF_SPLICE AL079338.1^ENSG00000286546.1 chr20:15985503:- CLIC4^ENSG00000169504.15 chr1:24797742:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1354:10579:24961 . YES_LDAS 0.0026 GT 1.9656 AG 1.7968 "[""INTERCHROMOSOMAL[chr20--chr1]""]" chr20:15985503-chr1:24797742 False 0 Read count too low: 1 < 5 FAIL 1
AL050309.1--KLF8 1 0 1.0 0.0 ONLY_REF_SPLICE AL050309.1^ENSG00000227486.2 chrX:56014961:+ KLF8^ENSG00000102349.18 chrX:56265180:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1486:46053:3844 . NO_LDAS 0.0102 GT 1.9329 AG 1.7465 "[""INTRACHROMOSOMAL[chrX:0.02Mb]"",""NEIGHBORS[23085]""]" chrX:56014961-chrX:56265180 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
AL050309.1--KLF8 1 0 1.0 0.0 ONLY_REF_SPLICE AL050309.1^ENSG00000227486.2 chrX:55908800:+ KLF8^ENSG00000102349.18 chrX:56250231:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2469:1105:13065 . NO_LDAS 0.0102 GT 1.8062 AG 1.7968 "[""INTRACHROMOSOMAL[chrX:0.02Mb]"",""NEIGHBORS[23085]""]" chrX:55908800-chrX:56250231 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
AL050309.1--KLF8 1 0 1.0 0.0 INCL_NON_REF_SPLICE AL050309.1^ENSG00000227486.2 chrX:56071808:+ KLF8^ENSG00000102349.18 chrX:56265180:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1409:6906:26222 . NO_LDAS 0.0102 GT 1.8256 AG 1.7465 "[""INTRACHROMOSOMAL[chrX:0.02Mb]"",""NEIGHBORS[23085]""]" chrX:56071808-chrX:56265180 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AL049766.1--RBM39 1 0 1.0 0.0 ONLY_REF_SPLICE AL049766.1^ENSG00000274760.1 chr20:49279208:+ RBM39^ENSG00000131051.24 chr20:35713096:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1350:43319:5806 . YES_LDAS 0.0102 GT 1.9656 AG 1.9329 "[""INTRACHROMOSOMAL[chr20:13.54Mb]""]" chr20:49279208-chr20:35713096 False 0 Read count too low: 1 < 5 FAIL 1
AL049766.1--NPLOC4 1 0 1.0 0.0 ONLY_REF_SPLICE AL049766.1^ENSG00000274760.1 chr20:49279208:+ NPLOC4^ENSG00000182446.14 chr17:81596242:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1209:8597:24751 . YES_LDAS 0.0102 GT 1.9656 AG 1.8256 "[""INTERCHROMOSOMAL[chr20--chr17]""]" chr20:49279208-chr17:81596242 False 0 Read count too low: 1 < 5 FAIL 1
AL031772.1--PYGB 1 0 1.0 0.0 INCL_NON_REF_SPLICE AL031772.1^ENSG00000231329.8 chr6:139166451:- PYGB^ENSG00000100994.12 chr20:25283188:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1145:5118:17380 . YES_LDAS 0.0102 GT 1.7056 AG 1.9899 "[""INTERCHROMOSOMAL[chr6--chr20]""]" chr6:139166451-chr20:25283188 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AL021918.5--NUP205 1 0 1.0 0.0 ONLY_REF_SPLICE AL021918.5^ENSG00000286652.1 chr6:27473309:+ NUP205^ENSG00000155561.15 chr7:135614159:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2324:37073:26600 . YES_LDAS 0.0102 GT 1.7465 AG 1.8323 "[""INTERCHROMOSOMAL[chr6--chr7]""]" chr6:27473309-chr7:135614159 False 0 Read count too low: 1 < 5 FAIL 1
AL021155.4--TBC1D3 1 0 0.12 0.0 ONLY_REF_SPLICE AL021155.4^ENSG00000285646.2 chr1:11908385:+ TBC1D3^ENSG00000274611.3 chr17:38188904:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1149:13717:25886 . YES_LDAS 0.0012 GT 1.7232 AG 1.8892 "[""INTERCHROMOSOMAL[chr1--chr17]""]" chr1:11908385-chr17:38188904 False 0 Read count too low: 1 < 5 FAIL 1
AKAP9--RAPGEF5 1 0 1.0 0.0 ONLY_REF_SPLICE AKAP9^ENSG00000127914.19 chr7:91941147:+ RAPGEF5^ENSG00000136237.19 chr7:22230919:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1133:33724:23686 . NO_LDAS 0.0102 GT 1.585 AG 1.8295 "[""INTRACHROMOSOMAL[chr7:69.58Mb]""]" chr7:91941147-chr7:22230919 False 0 Read count too low: 1 < 5 FAIL 1
AIMP2--NARS2 1 0 1.0 0.0 ONLY_REF_SPLICE AIMP2^ENSG00000106305.10 chr7:6009498:+ NARS2^ENSG00000137513.10 chr11:78559619:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1329:23361:13807 . YES_LDAS 0.0102 GT 1.8323 AG 1.9086 "[""INTERCHROMOSOMAL[chr7--chr11]""]" chr7:6009498-chr11:78559619 False 0 Read count too low: 1 < 5 FAIL 1
AIMP1--UBE2E2 1 0 1.0 0.0 INCL_NON_REF_SPLICE AIMP1^ENSG00000164022.17 chr4:106318359:+ UBE2E2^ENSG00000182247.10 chr3:23217262:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2249:31410:29655 . NO_LDAS 0.0102 GT 1.9219 AG 1.8295 "[""INTERCHROMOSOMAL[chr4--chr3]""]" chr4:106318359-chr3:23217262 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AICDA--RN7SL546P 1 0 0.33 0.0 INCL_NON_REF_SPLICE AICDA^ENSG00000111732.11 chr12:8603235:- RN7SL546P^ENSG00000239224.3 chr14:102583132:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1182:29808:4181 . YES_LDAS 0.0034 GT 1.8892 AG 1.9656 "[""INTERCHROMOSOMAL[chr12--chr14]""]" chr12:8603235-chr14:102583132 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AHNAK--ABCC12 1 0 1.0 0.0 INCL_NON_REF_SPLICE AHNAK^ENSG00000124942.14 chr11:62530154:- ABCC12^ENSG00000140798.16 chr16:48104287:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1102:25529:3522 . NO_LDAS 0.0102 GT 1.7465 AG 1.7968 "[""INTERCHROMOSOMAL[chr11--chr16]""]" chr11:62530154-chr16:48104287 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AHI1--HBS1L 1 0 1.0 0.0 ONLY_REF_SPLICE AHI1^ENSG00000135541.22 chr6:135394776:- HBS1L^ENSG00000112339.15 chr6:135050647:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1386:20918:21906 . YES_LDAS 0.0102 GT 1.9656 AG 1.5656 "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr6:0.18Mb]""]" chr6:135394776-chr6:135050647 False 0 Read count too low: 1 < 5 FAIL 1
AGO2--TPX2 1 0 1.0 0.0 ONLY_REF_SPLICE AGO2^ENSG00000123908.12 chr8:140539320:- TPX2^ENSG00000088325.16 chr20:31782249:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2328:34662:28114 . YES_LDAS 0.0102 GT 1.5219 AG 1.7465 "[""INTERCHROMOSOMAL[chr8--chr20]""]" chr8:140539320-chr20:31782249 False 0 Read count too low: 1 < 5 FAIL 1
AGL--ARL1 1 0 0.5 0.0 INCL_NON_REF_SPLICE AGL^ENSG00000162688.17 chr1:99912498:+ ARL1^ENSG00000120805.14 chr12:101407349:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1478:18361:26278 . NO_LDAS 0.0051 GT 1.8062 AG 1.2729 "[""INTERCHROMOSOMAL[chr1--chr12]""]" chr1:99912498-chr12:101407349 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AGFG2--SPOCD1 1 0 0.33 0.0 INCL_NON_REF_SPLICE AGFG2^ENSG00000106351.13 chr7:100556630:+ SPOCD1^ENSG00000134668.12 chr1:31799824:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2142:2408:20085 . NO_LDAS 0.0034 GT 1.8892 AG 1.8256 "[""INTERCHROMOSOMAL[chr7--chr1]""]" chr7:100556630-chr1:31799824 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AGFG2--PCNPP2 1 0 0.33 0.0 INCL_NON_REF_SPLICE AGFG2^ENSG00000106351.13 chr7:100556630:+ PCNPP2^ENSG00000225856.2 chr9:88971286:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2142:2408:20085 . NO_LDAS 0.0034 GT 1.8892 AG 1.8256 "[""INTERCHROMOSOMAL[chr7--chr9]""]" chr7:100556630-chr9:88971286 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AGFG2--LDLRAD4 1 0 0.33 0.0 INCL_NON_REF_SPLICE AGFG2^ENSG00000106351.13 chr7:100556630:+ LDLRAD4^ENSG00000168675.19 chr18:13543038:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2142:2408:20085 . NO_LDAS 0.0034 GT 1.8892 AG 1.585 "[""INTERCHROMOSOMAL[chr7--chr18]""]" chr7:100556630-chr18:13543038 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AGAP3--CYTH1 1 0 1.0 0.0 ONLY_REF_SPLICE AGAP3^ENSG00000133612.19 chr7:151087072:+ CYTH1^ENSG00000108669.16 chr17:78709732:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2314:7391:12854 . YES_LDAS 0.0102 GT 1.9656 AG 1.9656 "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr7--chr17]""]" chr7:151087072-chr17:78709732 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
AGAP10P--PARG 1 0 0.17 0.0 ONLY_REF_SPLICE AGAP10P^ENSG00000230869.1 chr10:45684520:+ PARG^ENSG00000227345.9 chr10:49869555:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1328:48165:25550 . YES_LDAS 0.0017 GT 1.7465 AG 1.7819 "[""INTRACHROMOSOMAL[chr10:4.12Mb]""]" chr10:45684520-chr10:49869555 False 0 Read count too low: 1 < 5 FAIL 1
AFF1--KDM3A 1 0 1.0 0.0 INCL_NON_REF_SPLICE AFF1^ENSG00000172493.22 chr4:87131205:+ KDM3A^ENSG00000115548.17 chr2:86451167:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1163:3330:8623 . NO_LDAS 0.0102 GT 1.9329 AG 1.7232 "[""INTERCHROMOSOMAL[chr4--chr2]""]" chr4:87131205-chr2:86451167 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AF130359.1--LARP1B 1 0 1.0 0.0 ONLY_REF_SPLICE AF130359.1^ENSG00000237735.2 chr21:16755680:- LARP1B^ENSG00000138709.19 chr4:128199439:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2341:51296:2303 . NO_LDAS 0.0102 GT 1.9329 AG 1.8256 "[""INTERCHROMOSOMAL[chr21--chr4]""]" chr21:16755680-chr4:128199439 False 0 Read count too low: 1 < 5 FAIL 1
AEN--ACAN 1 0 1.0 0.0 ONLY_REF_SPLICE AEN^ENSG00000181026.15 chr15:88626749:+ ACAN^ENSG00000157766.19 chr15:88836200:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1154:40050:9505 . YES_LDAS 0.0102 GT 1.7819 AG 1.9656 "[""INTRACHROMOSOMAL[chr15:0.17Mb]""]" chr15:88626749-chr15:88836200 False 0 Read count too low: 1 < 5 FAIL 1
ADRM1--ANXA8L1 1 0 1.0 0.0 INCL_NON_REF_SPLICE ADRM1^ENSG00000130706.13 chr20:62307452:+ ANXA8L1^ENSG00000264230.9 chr10:46375765:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1127:39128:28170 . NO_LDAS 0.0102 GT 1.7232 AG 1.8256 "[""INTERCHROMOSOMAL[chr20--chr10]""]" chr20:62307452-chr10:46375765 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ADPRH--TFEB 1 0 1.0 0.0 INCL_NON_REF_SPLICE ADPRH^ENSG00000144843.11 chr3:119587702:+ TFEB^ENSG00000112561.19 chr6:41686149:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1109:18984:8497 . YES_LDAS 0.0102 GT 1.8892 AG 1.9656 "[""INTERCHROMOSOMAL[chr3--chr6]""]" chr3:119587702-chr6:41686149 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ADPGK--CMC4 1 0 1.0 0.0 ONLY_REF_SPLICE ADPGK^ENSG00000159322.17 chr15:72760407:- CMC4^ENSG00000182712.16 chrX:155064033:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2209:7796:23027 . YES_LDAS 0.0102 GT 1.8892 AG 1.8295 "[""INTERCHROMOSOMAL[chr15--chrX]""]" chr15:72760407-chrX:155064033 False 0 Read count too low: 1 < 5 FAIL 1
ADM2--CTXN1 1 0 1.0 0.0 INCL_NON_REF_SPLICE ADM2^ENSG00000128165.9 chr22:50481961:+ CTXN1^ENSG00000178531.6 chr19:7925186:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2294:14745:12896 . NO_LDAS 0.0102 GT 1.9329 AG 1.2729 "[""INTERCHROMOSOMAL[chr22--chr19]""]" chr22:50481961-chr19:7925186 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ADK--LRMDA 1 0 1.0 0.0 ONLY_REF_SPLICE ADK^ENSG00000156110.15 chr10:74224591:+ LRMDA^ENSG00000148655.15 chr10:76036008:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1370:28085:4755 . NO_LDAS 0.0102 GT 1.6402 AG 1.9656 "[""DEEPEST2019"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr10:0.72Mb]""]" chr10:74224591-chr10:76036008 False 0 Read count too low: 1 < 5 FAIL 1
ADK--AC108059.2 1 0 0.5 0.0 INCL_NON_REF_SPLICE ADK^ENSG00000156110.15 chr10:74600493:+ AC108059.2^ENSG00000234044.1 chr2:128067375:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1379:13135:1589 . YES_LDAS 0.0051 GT 1.9656 AG 1.9219 "[""INTERCHROMOSOMAL[chr10--chr2]""]" chr10:74600493-chr2:128067375 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ADIPOR2--NUMB 1 0 1.0 0.0 ONLY_REF_SPLICE ADIPOR2^ENSG00000006831.10 chr12:1691213:+ NUMB^ENSG00000133961.20 chr14:73297285:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1320:37405:7165 . YES_LDAS 0.0102 GT 1.5329 AG 1.6402 "[""INTERCHROMOSOMAL[chr12--chr14]""]" chr12:1691213-chr14:73297285 False 0 Read count too low: 1 < 5 FAIL 1
ADGRE5--SOX2-OT 1 0 1.0 0.0 INCL_NON_REF_SPLICE ADGRE5^ENSG00000123146.20 chr19:14388504:+ SOX2-OT^ENSG00000242808.10 chr3:181631452:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1344:28797:20505 . NO_LDAS 0.0102 GT 1.8295 AG 1.7819 "[""INTERCHROMOSOMAL[chr19--chr3]""]" chr19:14388504-chr3:181631452 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ADGRB3--PUF60 1 0 1.0 0.0 INCL_NON_REF_SPLICE ADGRB3^ENSG00000135298.14 chr6:69389218:+ PUF60^ENSG00000179950.14 chr8:143818285:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1238:9656:19861 . NO_LDAS 0.0102 GT 1.7968 AG 1.5656 "[""INTERCHROMOSOMAL[chr6--chr8]""]" chr6:69389218-chr8:143818285 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ADD3--GAS2 1 0 1.0 0.0 INCL_NON_REF_SPLICE ADD3^ENSG00000148700.15 chr10:110122212:+ GAS2^ENSG00000148935.11 chr11:22674887:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1204:15303:5652 . YES_LDAS 0.0102 GT 1.7232 AG 1.8256 "[""INTERCHROMOSOMAL[chr10--chr11]""]" chr10:110122212-chr11:22674887 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ADAT2--HBS1L 1 0 1.0 0.0 ONLY_REF_SPLICE ADAT2^ENSG00000189007.16 chr6:143450563:- HBS1L^ENSG00000112339.15 chr6:135002842:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2205:49200:21374 . YES_LDAS 0.0102 GT 1.8892 AG 1.8295 "[""INTRACHROMOSOMAL[chr6:8.32Mb]""]" chr6:143450563-chr6:135002842 False 0 Read count too low: 1 < 5 FAIL 1
ADAT1--MFF 1 0 1.0 0.0 ONLY_REF_SPLICE ADAT1^ENSG00000065457.11 chr16:75603085:- MFF^ENSG00000168958.20 chr2:227355677:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1494:27527:7852 . YES_LDAS 0.0102 GT 1.7232 AG 1.9086 "[""INTERCHROMOSOMAL[chr16--chr2]""]" chr16:75603085-chr2:227355677 False 0 Read count too low: 1 < 5 FAIL 1
ADAP1--C7orf50 1 0 1.0 0.0 ONLY_REF_SPLICE ADAP1^ENSG00000105963.15 chr7:904126:- C7orf50^ENSG00000146540.15 chr7:997804:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2476:50915:5092 . YES_LDAS 0.0102 GT 1.6895 AG 1.9656 "[""DEEPEST2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr7:0.04Mb]"",""LOCAL_REARRANGEMENT:-:[41579]""]" chr7:904126-chr7:997804 False 0 Read count too low: 1 < 5 FAIL 1
ADAMTS2--HSP90AA1 1 0 1.0 0.0 INCL_NON_REF_SPLICE ADAMTS2^ENSG00000087116.16 chr5:179273036:- HSP90AA1^ENSG00000080824.19 chr14:102086330:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1469:19267:1953 . NO_LDAS 0.0102 GT 1.231 AG 1.9329 "[""INTERCHROMOSOMAL[chr5--chr14]""]" chr5:179273036-chr14:102086330 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ADAM22--NUMB 1 0 1.0 0.0 ONLY_REF_SPLICE ADAM22^ENSG00000008277.14 chr7:87935186:+ NUMB^ENSG00000133961.20 chr14:73297285:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2374:51927:18501 . NO_LDAS 0.0102 GT 1.7056 AG 1.6402 "[""INTERCHROMOSOMAL[chr7--chr14]""]" chr7:87935186-chr14:73297285 False 0 Read count too low: 1 < 5 FAIL 1
ADAM17--YWHAQ 1 0 1.0 0.0 ONLY_REF_SPLICE ADAM17^ENSG00000151694.14 chr2:9535834:- YWHAQ^ENSG00000134308.14 chr2:9588328:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1181:16800:18726 . YES_LDAS 0.0102 GT 1.6729 AG 1.6402 "[""Klijn_CellLines"",""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr2:0.03Mb]"",""LOCAL_REARRANGEMENT:-:[27235]""]" chr2:9535834-chr2:9588328 False 0 Read count too low: 1 < 5 FAIL 1
ADAM17--NCOA1 1 0 1.0 0.0 ONLY_REF_SPLICE ADAM17^ENSG00000151694.14 chr2:9555509:- NCOA1^ENSG00000084676.15 chr2:24564295:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1402:16233:21052 . YES_LDAS 0.0102 GT 1.7465 AG 1.5656 "[""INTRACHROMOSOMAL[chr2:14.94Mb]""]" chr2:9555509-chr2:24564295 False 0 Read count too low: 1 < 5 FAIL 1
ADA--CLEC7A 1 0 1.0 0.0 INCL_NON_REF_SPLICE ADA^ENSG00000196839.13 chr20:44651575:- CLEC7A^ENSG00000172243.18 chr12:10117527:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1377:40770:13387 . YES_LDAS 0.0102 GT 1.8323 AG 1.9656 "[""INTERCHROMOSOMAL[chr20--chr12]""]" chr20:44651575-chr12:10117527 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ACTR3B--CAND1 1 0 1.0 0.0 ONLY_REF_SPLICE ACTR3B^ENSG00000133627.18 chr7:152825122:+ CAND1^ENSG00000111530.13 chr12:67281910:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1252:41167:2583 . YES_LDAS 0.0102 GT 1.9656 AG 1.9086 "[""INTERCHROMOSOMAL[chr7--chr12]""]" chr7:152825122-chr12:67281910 False 0 Read count too low: 1 < 5 FAIL 1
ACTR3--HIF1AN 1 0 1.0 0.0 INCL_NON_REF_SPLICE ACTR3^ENSG00000115091.12 chr2:113931396:+ HIF1AN^ENSG00000166135.14 chr10:100545204:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2477:27826:16862 . NO_LDAS 0.0102 GT 1.9656 AG 1.7465 "[""INTERCHROMOSOMAL[chr2--chr10]""]" chr2:113931396-chr10:100545204 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ACTN4--MRPL38 1 0 1.0 0.0 INCL_NON_REF_SPLICE ACTN4^ENSG00000130402.13 chr19:38717193:+ MRPL38^ENSG00000204316.13 chr17:75901273:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2398:50721:21038 . NO_LDAS 0.0102 GT 1.8323 AG 1.7465 "[""INTERCHROMOSOMAL[chr19--chr17]""]" chr19:38717193-chr17:75901273 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ACOX3--PHGDH 1 0 1.0 0.0 ONLY_REF_SPLICE ACOX3^ENSG00000087008.16 chr4:8440648:- PHGDH^ENSG00000092621.13 chr1:119734634:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2147:5757:3298 . YES_LDAS 0.0102 GT 1.5329 AG 1.9329 "[""INTERCHROMOSOMAL[chr4--chr1]""]" chr4:8440648-chr1:119734634 False 0 Read count too low: 1 < 5 FAIL 1
ACD--ATP8A2P2 1 0 1.0 0.0 INCL_NON_REF_SPLICE ACD^ENSG00000102977.17 chr16:67657762:- ATP8A2P2^ENSG00000229800.1 chr13:32478416:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1262:31944:26881 . NO_LDAS 0.0102 GT 1.9656 AG 1.5546 "[""INTERCHROMOSOMAL[chr16--chr13]""]" chr16:67657762-chr13:32478416 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ACADVL--KANSL2 1 0 1.0 0.0 INCL_NON_REF_SPLICE ACADVL^ENSG00000072778.20 chr17:7224048:+ KANSL2^ENSG00000139620.13 chr12:48658722:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1188:45713:25928 . YES_LDAS 0.0102 GT 1.6729 AG 1.9656 "[""INTERCHROMOSOMAL[chr17--chr12]""]" chr17:7224048-chr12:48658722 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC245297.3--AL353807.3 1 0 0.25 0.0 INCL_NON_REF_SPLICE AC245297.3^ENSG00000274265.5 chr1:149177291:+ AL353807.3^ENSG00000246203.2 chr1:155619028:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2193:13540:18515 . YES_LDAS 0.0026 GT 1.5219 AG 1.8892 "[""INTRACHROMOSOMAL[chr1:6.35Mb]""]" chr1:149177291-chr1:155619028 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC139100.1--DESI1 1 0 0.5 0.0 INCL_NON_REF_SPLICE AC139100.1^ENSG00000267251.2 chr18:80184673:+ DESI1^ENSG00000100418.8 chr22:41607861:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1269:14146:8525 . NO_LDAS 0.0051 GT 1.9656 AG 1.6895 "[""INTERCHROMOSOMAL[chr18--chr22]""]" chr18:80184673-chr22:41607861 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC138409.2--CDK7 1 0 0.33 0.0 ONLY_REF_SPLICE AC138409.2^ENSG00000215158.9 chr5:34244616:- CDK7^ENSG00000134058.12 chr5:69252418:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1138:35302:22131 . YES_LDAS 0.0034 GT 1.9656 AG 1.8892 "[""INTRACHROMOSOMAL[chr5:34.99Mb]""]" chr5:34244616-chr5:69252418 False 0 Read count too low: 1 < 5 FAIL 1
AC134878.2--CANX 1 0 1.0 0.0 ONLY_REF_SPLICE AC134878.2^ENSG00000278212.2 chrY:11212744:- CANX^ENSG00000127022.16 chr5:179705679:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1468:31354:18235 . YES_LDAS 0.0102 GT 1.8892 AG 1.7056 "[""INTERCHROMOSOMAL[chrY--chr5]""]" chrY:11212744-chr5:179705679 False 0 Read count too low: 1 < 5 FAIL 1
AC127502.3--AC127502.1 1 0 0.25 0.0 ONLY_REF_SPLICE AC127502.3^ENSG00000283345.1 chr15:30513698:+ AC127502.1^ENSG00000215302.8 chr15:30474356:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1456:47501:8314 . YES_LDAS 0.0026 GT 1.5329 AG 1.9656 "[""INTRACHROMOSOMAL[chr15:0.00Mb]"",""NEIGHBORS_OVERLAP:+:+:[246]""]" chr15:30513698-chr15:30474356 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
AC126544.2--LRRC37B 1 0 0.5 0.0 INCL_NON_REF_SPLICE AC126544.2^ENSG00000285668.1 chr17:45586692:- LRRC37B^ENSG00000185158.12 chr17:32034910:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2436:10490:27637 . NO_LDAS 0.0051 GT 1.9086 AG 1.8062 "[""INTRACHROMOSOMAL[chr17:13.53Mb]""]" chr17:45586692-chr17:32034910 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC119868.1--SEPTIN7 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC119868.1^ENSG00000264845.2 chr18:69469688:+ SEPTIN7^ENSG00000122545.20 chr7:35832798:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2287:41175:6521 . NO_LDAS 0.0102 GC 1.8892 AG 1.7968 "[""INTERCHROMOSOMAL[chr18--chr7]""]" chr18:69469688-chr7:35832798 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC114498.2--SNRNP70 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC114498.2^ENSG00000278791.1 chr1:632375:- SNRNP70^ENSG00000104852.15 chr19:49086407:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2310:2044:14214 . NO_LDAS 0.0102 AT 1.7465 AC 1.9899 "[""INTERCHROMOSOMAL[chr1--chr19]""]" chr1:632375-chr19:49086407 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC108161.1--CLCN3 1 0 0.25 0.0 INCL_NON_REF_SPLICE AC108161.1^ENSG00000226439.3 chr4:61775614:- CLCN3^ENSG00000109572.14 chr4:169692114:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1144:45568:13149 . YES_LDAS 0.0026 GT 1.7465 AG 1.2867 "[""INTRACHROMOSOMAL[chr4:107.84Mb]""]" chr4:61775614-chr4:169692114 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC103831.1--ZNF674 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC103831.1^ENSG00000253924.2 chr8:52301959:+ ZNF674^ENSG00000251192.7 chrX:46528428:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2122:3678:28366 . NO_LDAS 0.0102 GT 1.8892 AG 1.9656 "[""INTERCHROMOSOMAL[chr8--chrX]""]" chr8:52301959-chrX:46528428 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC096570.1--RN7SL396P 1 0 0.25 0.0 INCL_NON_REF_SPLICE AC096570.1^ENSG00000228999.4 chr2:21943722:- RN7SL396P^ENSG00000244642.3 chr8:119862706:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1116:21799:8413 . YES_LDAS 0.0026 GT 1.9086 AG 1.7232 "[""INTERCHROMOSOMAL[chr2--chr8]""]" chr2:21943722-chr8:119862706 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC093512.2--TPRN 1 0 1.0 0.0 ONLY_REF_SPLICE AC093512.2^ENSG00000285043.2 chr16:30064505:+ TPRN^ENSG00000176058.13 chr9:137192691:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2144:48149:24036 . YES_LDAS 0.0102 GT 1.9219 AG 1.9329 "[""INTERCHROMOSOMAL[chr16--chr9]""]" chr16:30064505-chr9:137192691 False 0 Read count too low: 1 < 5 FAIL 1
AC092747.2--MED21 1 0 0.5 0.0 INCL_NON_REF_SPLICE AC092747.2^ENSG00000256625.1 chr12:27147656:+ MED21^ENSG00000152944.9 chr12:27030158:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1468:30820:13219 . YES_LDAS 0.0051 GT 1.5656 AG 1.9656 "[""INTRACHROMOSOMAL[chr12:0.06Mb]"",""LOCAL_REARRANGEMENT:+:[55567]""]" chr12:27147656-chr12:27030158 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC092032.2--RBAK 1 0 1.0 0.0 ONLY_REF_SPLICE AC092032.2^ENSG00000288620.1 chr7:4989177:+ RBAK^ENSG00000146587.18 chr7:5048033:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1441:31305:4951 . YES_LDAS 0.0102 GT 1.8892 AG 1.8892 "[""INTRACHROMOSOMAL[chr7:0.06Mb]"",""NEIGHBORS[56644]""]" chr7:4989177-chr7:5048033 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
AC091588.3--GCN1 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC091588.3^ENSG00000266283.1 chr18:22200619:- GCN1^ENSG00000089154.11 chr12:120160246:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1141:43270:17016 . NO_LDAS 0.0102 GT 1.2867 AG 1.6402 "[""INTERCHROMOSOMAL[chr18--chr12]""]" chr18:22200619-chr12:120160246 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC091057.6--ARHGAP11B 1 0 1.0 0.0 ONLY_REF_SPLICE AC091057.6^ENSG00000285035.1 chr15:30646295:+ ARHGAP11B^ENSG00000285077.2 chr15:30635080:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2241:24178:19426 . YES_LDAS 0.0102 GT 1.3996 AG 1.8295 "[""INTRACHROMOSOMAL[chr15:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[9246]""]" chr15:30646295-chr15:30635080 False 0 Read count too low: 1 < 5 FAIL 1
AC091057.4--ARHGAP11A 1 0 0.25 0.0 INCL_NON_REF_SPLICE AC091057.4^ENSG00000284783.1 chr15:30750556:+ ARHGAP11A^ENSG00000198826.11 chr15:32620108:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2476:41353:27007 . YES_LDAS 0.0026 GT 1.8892 AG 1.5656 "[""INTRACHROMOSOMAL[chr15:1.86Mb]""]" chr15:30750556-chr15:32620108 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC090912.1--LUC7L2 1 0 1.0 0.0 ONLY_REF_SPLICE AC090912.1^ENSG00000265943.1 chr18:22920762:- LUC7L2^ENSG00000146963.18 chr7:139376062:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2478:30755:11285 . YES_LDAS 0.0102 GT 1.9656 AG 1.9656 "[""INTERCHROMOSOMAL[chr18--chr7]""]" chr18:22920762-chr7:139376062 False 0 Read count too low: 1 < 5 FAIL 1
AC090114.3--AL133216.2 1 0 0.08 0.0 ONLY_REF_SPLICE AC090114.3^ENSG00000280828.1 chr7:128615970:+ AL133216.2^ENSG00000276805.2 chr10:38407631:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1264:5595:6044 . NO_LDAS 0.0008 GT 1.8892 AG 1.8892 "[""INTERCHROMOSOMAL[chr7--chr10]""]" chr7:128615970-chr10:38407631 False 0 Read count too low: 1 < 5 FAIL 1
AC079341.1--BAZ1B 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC079341.1^ENSG00000261501.1 chr4:121871726:+ BAZ1B^ENSG00000009954.11 chr7:73508471:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1250:24623:25437 . YES_LDAS 0.0102 GT 1.9329 AG 1.5656 "[""INTERCHROMOSOMAL[chr4--chr7]""]" chr4:121871726-chr7:73508471 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC079142.1--EGLN3 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC079142.1^ENSG00000285679.2 chrX:7928591:+ EGLN3^ENSG00000129521.15 chr14:33987113:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1281:1938:23504 . YES_LDAS 0.0102 GT 1.5058 AG 1.8892 "[""INTERCHROMOSOMAL[chrX--chr14]""]" chrX:7928591-chr14:33987113 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC078983.1--ATP13A3 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC078983.1^ENSG00000286563.1 chr12:67350420:+ ATP13A3^ENSG00000133657.16 chr3:194438914:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1197:26136:22257 . NO_LDAS 0.0102 GT 1.7819 AG 1.7819 "[""INTERCHROMOSOMAL[chr12--chr3]""]" chr12:67350420-chr3:194438914 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC073114.1--IMMP2L 1 0 1.0 0.0 ONLY_REF_SPLICE AC073114.1^ENSG00000226965.2 chr7:110432811:- IMMP2L^ENSG00000184903.10 chr7:110963565:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1331:41288:25269 . YES_LDAS 0.0102 GT 1.5058 AG 1.7819 "[""INTRACHROMOSOMAL[chr7:0.13Mb]""]" chr7:110432811-chr7:110963565 False 0 Read count too low: 1 < 5 FAIL 1
AC068205.4--PHBP9 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC068205.4^ENSG00000283483.1 chr11:43733790:+ PHBP9^ENSG00000230224.1 chr10:100248295:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2474:9745:7404 . NO_LDAS 0.0102 GT 1.9899 AG 1.8062 "[""INTERCHROMOSOMAL[chr11--chr10]""]" chr11:43733790-chr10:100248295 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC067863.2--MASTL 1 0 1.0 0.0 ONLY_REF_SPLICE AC067863.2^ENSG00000279421.1 chr15:78599892:- MASTL^ENSG00000120539.15 chr10:27158549:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2327:9284:19440 . NO_LDAS 0.0102 GT 1.9656 AG 1.7465 "[""INTERCHROMOSOMAL[chr15--chr10]""]" chr15:78599892-chr10:27158549 False 0 Read count too low: 1 < 5 FAIL 1
AC067852.5--USP48 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC067852.5^ENSG00000287710.1 chr17:42578142:+ USP48^ENSG00000090686.16 chr1:21706868:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2342:33336:8749 . YES_LDAS 0.0102 GT 1.7465 AG 1.8062 "[""INTERCHROMOSOMAL[chr17--chr1]""]" chr17:42578142-chr1:21706868 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC067817.2--STAP1 1 0 1.0 0.0 ONLY_REF_SPLICE AC067817.2^ENSG00000253829.1 chr8:38846158:- STAP1^ENSG00000035720.8 chr4:67590884:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1190:43756:4601 . NO_LDAS 0.0102 GC 1.9656 AG 1.7465 "[""INTERCHROMOSOMAL[chr8--chr4]""]" chr8:38846158-chr4:67590884 False 0 Read count too low: 1 < 5 FAIL 1
AC063919.1--CCDC50 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC063919.1^ENSG00000251448.2 chr3:126289862:- CCDC50^ENSG00000152492.15 chr3:191380911:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2498:38327:17955 . NO_LDAS 0.0102 GC 1.9329 AG 1.5058 "[""INTRACHROMOSOMAL[chr3:65.03Mb]""]" chr3:126289862-chr3:191380911 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC061965.2--MTCH2 1 0 0.5 0.0 INCL_NON_REF_SPLICE AC061965.2^ENSG00000259299.1 chr15:29234886:- MTCH2^ENSG00000109919.10 chr11:47622776:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1463:29784:17675 . YES_LDAS 0.0051 GT 1.7819 AG 1.7056 "[""INTERCHROMOSOMAL[chr15--chr11]""]" chr15:29234886-chr11:47622776 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC055854.1--EIF4G3 1 0 1.0 0.0 ONLY_REF_SPLICE AC055854.1^ENSG00000253125.1 chr8:22745701:+ EIF4G3^ENSG00000075151.22 chr1:21089213:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1193:49532:15643 . NO_LDAS 0.0102 GT 1.9329 AG 1.9656 "[""INTERCHROMOSOMAL[chr8--chr1]""]" chr8:22745701-chr1:21089213 False 0 Read count too low: 1 < 5 FAIL 1
AC027369.3--CKAP4 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC027369.3^ENSG00000254728.1 chr11:48901930:- CKAP4^ENSG00000136026.14 chr12:106247446:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2414:37915:19790 . NO_LDAS 0.0102 GT 1.8295 AG 1.7056 "[""INTERCHROMOSOMAL[chr11--chr12]""]" chr11:48901930-chr12:106247446 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC027097.1--D2HGDH 1 0 1.0 0.0 ONLY_REF_SPLICE AC027097.1^ENSG00000267040.6 chr18:57642052:+ D2HGDH^ENSG00000180902.18 chr2:241767710:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2473:39516:10711 . YES_LDAS 0.0102 GT 1.7232 AG 1.9656 "[""INTERCHROMOSOMAL[chr18--chr2]""]" chr18:57642052-chr2:241767710 False 0 Read count too low: 1 < 5 FAIL 1
AC026765.3--CBFA2T2 1 0 1.0 0.0 ONLY_REF_SPLICE AC026765.3^ENSG00000257817.2 chr12:114748210:+ CBFA2T2^ENSG00000078699.22 chr20:33640341:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2270:44524:10977 . YES_LDAS 0.0102 GT 1.9329 AG 1.7465 "[""INTERCHROMOSOMAL[chr12--chr20]""]" chr12:114748210-chr20:33640341 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
AC026436.1--AP3B1 1 0 0.14 0.0 INCL_NON_REF_SPLICE AC026436.1^ENSG00000248794.1 chr5:81242495:- AP3B1^ENSG00000132842.14 chr5:78216237:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1234:19712:18221 . YES_LDAS 0.0014 GT 1.7465 AG 1.8323 "[""INTRACHROMOSOMAL[chr5:2.95Mb]""]" chr5:81242495-chr5:78216237 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC025283.2--SFI1 1 0 0.5 0.0 INCL_NON_REF_SPLICE AC025283.2^ENSG00000285329.1 chr16:3384553:+ SFI1^ENSG00000198089.16 chr22:31611289:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2195:31564:9183 . NO_LDAS 0.0051 GT 1.7465 AG 1.7465 "[""INTERCHROMOSOMAL[chr16--chr22]""]" chr16:3384553-chr22:31611289 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC025279.2--SNX29P1 1 0 1.0 0.0 ONLY_REF_SPLICE AC025279.2^ENSG00000260413.1 chr16:29328624:+ SNX29P1^ENSG00000158482.10 chr16:21376648:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1424:37413:26096 . NO_LDAS 0.0102 GT 1.5656 AG 1.8256 "[""INTRACHROMOSOMAL[chr16:7.93Mb]""]" chr16:29328624-chr16:21376648 False 0 Read count too low: 1 < 5 FAIL 1
AC025178.1--GOLPH3 1 0 1.0 0.0 ONLY_REF_SPLICE AC025178.1^ENSG00000250764.1 chr5:32121495:- GOLPH3^ENSG00000113384.14 chr5:32126636:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2185:7626:2780 . YES_LDAS 0.0102 GT 1.8892 AG 1.9086 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[2775]""]" chr5:32121495-chr5:32126636 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
AC022400.4--BMS1P4 1 0 1.0 0.0 ONLY_REF_SPLICE AC022400.4^ENSG00000272140.2 chr10:73713204:- BMS1P4^ENSG00000242338.6 chr10:73721504:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2468:24323:18389 . YES_LDAS 0.0102 GT 1.8892 AG 1.9329 "[""INTRACHROMOSOMAL[chr10:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[2262]""]" chr10:73713204-chr10:73721504 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
AC022182.1--CLVS1 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC022182.1^ENSG00000254777.5 chr8:60966237:+ CLVS1^ENSG00000177182.11 chr8:61131770:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2144:3152:10781 . NO_LDAS 0.0102 GT 1.9656 AG 1.9086 "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr8:0.09Mb]"",""NEIGHBORS[90601]""]" chr8:60966237-chr8:61131770 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
AC016629.1--RPL23AP82 1 0 0.5 0.0 ONLY_REF_SPLICE AC016629.1^ENSG00000269032.1 chr19:58586356:+ RPL23AP82^ENSG00000184319.16 chr22:50798655:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1479:45730:26797 . YES_LDAS 0.0051 GT 1.7819 AG 1.8062 "[""INTERCHROMOSOMAL[chr19--chr22]""]" chr19:58586356-chr22:50798655 False 0 Read count too low: 1 < 5 FAIL 1
AC015911.9--AMZ2 1 0 1.0 0.0 ONLY_REF_SPLICE AC015911.9^ENSG00000286030.2 chr17:35522279:- AMZ2^ENSG00000196704.14 chr17:68250188:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2227:34371:23966 . YES_LDAS 0.0102 GT 1.9329 AG 1.8295 "[""INTRACHROMOSOMAL[chr17:32.68Mb]""]" chr17:35522279-chr17:68250188 False 0 Read count too low: 1 < 5 FAIL 1
AC009533.1--CREB3L4 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC009533.1^ENSG00000111788.10 chr12:9298911:+ CREB3L4^ENSG00000143578.16 chr1:153969421:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2161:24849:7418 . NO_LDAS 0.0102 GT 1.6729 AG 1.7465 "[""INTERCHROMOSOMAL[chr12--chr1]""]" chr12:9298911-chr1:153969421 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC009315.1--FSIP2 1 0 1.0 0.0 ONLY_REF_SPLICE AC009315.1^ENSG00000286797.1 chr2:185483091:+ FSIP2^ENSG00000188738.15 chr2:185739346:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1205:32195:8763 . YES_LDAS 0.0102 GT 1.7968 AG 1.8256 "[""INTRACHROMOSOMAL[chr2:0.23Mb]""]" chr2:185483091-chr2:185739346 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
AC009093.9--ZC3H7A 1 0 1.0 0.0 ONLY_REF_SPLICE AC009093.9^ENSG00000284671.1 chr16:29086275:+ ZC3H7A^ENSG00000122299.12 chr16:11774519:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1311:3856:26965 . YES_LDAS 0.0102 GT 1.8323 AG 1.5219 "[""INTRACHROMOSOMAL[chr16:17.28Mb]""]" chr16:29086275-chr16:11774519 False 0 Read count too low: 1 < 5 FAIL 1
AC009021.1--RRN3 1 0 1.0 0.0 ONLY_REF_SPLICE AC009021.1^ENSG00000260905.1 chr16:22613454:- RRN3^ENSG00000085721.13 chr16:15092614:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1445:29218:8286 . YES_LDAS 0.0102 GT 1.5301 AG 1.9086 "[""INTRACHROMOSOMAL[chr16:7.52Mb]""]" chr16:22613454-chr16:15092614 False 0 Read count too low: 1 < 5 FAIL 1
AC008740.2--BCL7A 1 0 0.33 0.0 INCL_NON_REF_SPLICE AC008740.2^ENSG00000276548.1 chr16:21401194:+ BCL7A^ENSG00000110987.9 chr12:122030700:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2498:21387:13219 . YES_LDAS 0.0034 GT 1.8892 AG 1.4295 "[""INTERCHROMOSOMAL[chr16--chr12]""]" chr16:21401194-chr12:122030700 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC008740.2--AHSA2P 1 0 0.5 0.0 INCL_NON_REF_SPLICE AC008740.2^ENSG00000276548.1 chr16:21401194:+ AHSA2P^ENSG00000173209.23 chr2:61178986:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1427:30286:9519 . YES_LDAS 0.0051 GT 1.8892 AG 1.8256 "[""INTERCHROMOSOMAL[chr16--chr2]""]" chr16:21401194-chr2:61178986 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC008040.1--TBL1XR1 1 0 1.0 0.0 ONLY_REF_SPLICE AC008040.1^ENSG00000239219.2 chr3:169965978:- TBL1XR1^ENSG00000177565.18 chr3:177065022:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1161:20554:23294 . YES_LDAS 0.0102 GT 1.9899 AG 1.7968 "[""INTRACHROMOSOMAL[chr3:7.05Mb]""]" chr3:169965978-chr3:177065022 False 0 Read count too low: 1 < 5 FAIL 1
AC008038.1--F2RL3 1 0 0.5 0.0 INCL_NON_REF_SPLICE AC008038.1^ENSG00000283041.1 chr7:133035502:- F2RL3^ENSG00000127533.4 chr19:16889661:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2152:21597:21766 . NO_LDAS 0.0051 GC 1.8295 AG 1.8892 "[""INTERCHROMOSOMAL[chr7--chr19]""]" chr7:133035502-chr19:16889661 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC007569.1--PARP4 1 0 1.0 0.0 ONLY_REF_SPLICE AC007569.1^ENSG00000257221.4 chr12:108636046:+ PARP4^ENSG00000102699.6 chr13:24460136:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1389:14276:20295 . YES_LDAS 0.0102 GT 1.9656 AG 1.8295 "[""INTERCHROMOSOMAL[chr12--chr13]""]" chr12:108636046-chr13:24460136 False 0 Read count too low: 1 < 5 FAIL 1
AC007569.1--MICU2 1 0 1.0 0.0 ONLY_REF_SPLICE AC007569.1^ENSG00000257221.4 chr12:108636046:+ MICU2^ENSG00000165487.14 chr13:21495318:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2477:7941:8679 . YES_LDAS 0.0102 GT 1.9656 AG 1.7819 "[""INTERCHROMOSOMAL[chr12--chr13]""]" chr12:108636046-chr13:21495318 False 0 Read count too low: 1 < 5 FAIL 1
AC007383.1--EEF1D 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC007383.1^ENSG00000227946.1 chr2:206086058:+ EEF1D^ENSG00000104529.17 chr8:143586852:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2361:19389:4937 . NO_LDAS 0.0102 GT 1.8323 AG 1.8295 "[""INTERCHROMOSOMAL[chr2--chr8]""]" chr2:206086058-chr8:143586852 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC005670.3--TBC1D5 1 0 1.0 0.0 ONLY_REF_SPLICE AC005670.3^ENSG00000262879.6 chr17:47054118:- TBC1D5^ENSG00000131374.14 chr3:17508605:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1323:50284:2065 . YES_LDAS 0.0102 GT 1.6895 AG 1.6402 "[""INTERCHROMOSOMAL[chr17--chr3]""]" chr17:47054118-chr3:17508605 False 0 Read count too low: 1 < 5 FAIL 1
AC005540.1--ZBTB7A 1 0 1.0 0.0 ONLY_REF_SPLICE AC005540.1^ENSG00000235852.1 chr2:190881913:- ZBTB7A^ENSG00000178951.9 chr19:4055247:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1297:42655:17857 . YES_LDAS 0.0102 GT 1.7819 AG 1.7968 "[""INTERCHROMOSOMAL[chr2--chr19]""]" chr2:190881913-chr19:4055247 False 0 Read count too low: 1 < 5 FAIL 1
AC005332.4--ARL17B 1 0 1.0 0.0 ONLY_REF_SPLICE AC005332.4^ENSG00000274712.2 chr17:68206238:+ ARL17B^ENSG00000228696.10 chr17:46275418:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1175:16055:26040 . YES_LDAS 0.0102 GT 1.7819 AG 1.6895 "[""INTRACHROMOSOMAL[chr17:21.84Mb]""]" chr17:68206238-chr17:46275418 False 0 Read count too low: 1 < 5 FAIL 1
AC004980.2--AC004980.1 1 0 0.5 0.0 INCL_NON_REF_SPLICE AC004980.2^ENSG00000214243.3 chr7:76650398:- AC004980.1^ENSG00000205485.13 chr7:76551464:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2107:32535:10388 . NO_LDAS 0.0051 GT 1.9656 AG 1.9656 "[""INTRACHROMOSOMAL[chr7:0.02Mb]"",""LOCAL_INVERSION:-:+:[22419]""]" chr7:76650398-chr7:76551464 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC004967.1--CNTROB 1 0 0.33 0.0 ONLY_REF_SPLICE AC004967.1^ENSG00000243554.1 chr7:97969770:- CNTROB^ENSG00000170037.14 chr17:7945728:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1341:40819:23868 . YES_LDAS 0.0034 GT 1.4566 AG 1.8062 "[""INTERCHROMOSOMAL[chr7--chr17]""]" chr7:97969770-chr17:7945728 False 0 Read count too low: 1 < 5 FAIL 1
AC004812.2--MAP3K9 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC004812.2^ENSG00000277283.1 chr12:120117206:+ MAP3K9^ENSG00000006432.16 chr14:70809081:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1417:4115:23714 . NO_LDAS 0.0102 GT 1.231 AG 0.9183 "[""INTERCHROMOSOMAL[chr12--chr14]""]" chr12:120117206-chr14:70809081 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC004706.3--LCP2 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC004706.3^ENSG00000282936.2 chr17:6636313:- LCP2^ENSG00000043462.13 chr5:170261137:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:2339:45042:1729 . NO_LDAS 0.0102 GT 1.7232 AG 1.8295 "[""INTERCHROMOSOMAL[chr17--chr5]""]" chr17:6636313-chr5:170261137 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC004687.1--RERE 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC004687.1^ENSG00000265206.5 chr17:58331453:- RERE^ENSG00000142599.19 chr1:8360668:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1151:3556:14452 . YES_LDAS 0.0102 GC 1.7465 AG 1.1033 "[""INTERCHROMOSOMAL[chr17--chr1]""]" chr17:58331453-chr1:8360668 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC004540.1--RNF157 1 0 1.0 0.0 ONLY_REF_SPLICE AC004540.1^ENSG00000214870.9 chr7:26403517:+ RNF157^ENSG00000141576.16 chr17:76212482:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1320:21686:12896 . YES_LDAS 0.0102 GT 1.9656 AG 1.9656 "[""INTERCHROMOSOMAL[chr7--chr17]""]" chr7:26403517-chr17:76212482 False 0 Read count too low: 1 < 5 FAIL 1
AC004012.1--NOP10 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC004012.1^ENSG00000233942.1 chr7:95471967:+ NOP10^ENSG00000182117.6 chr15:34342108:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1459:14842:22509 . NO_LDAS 0.0102 GT 1.9086 AG 1.9656 "[""INTERCHROMOSOMAL[chr7--chr15]""]" chr7:95471967-chr15:34342108 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ABR--TIMM22 1 0 1.0 0.0 ONLY_REF_SPLICE ABR^ENSG00000159842.15 chr17:1050050:- TIMM22^ENSG00000177370.5 chr17:1001012:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:1201:9495:22775 . YES_LDAS 0.0102 GT 1.7465 AG 1.9656 "[""INTRACHROMOSOMAL[chr17:0.00Mb]"",""NEIGHBORS_OVERLAP:-:+:[153]""]" chr17:1050050-chr17:1001012 False 0 Read count too low: 1 < 5 FAIL 1
ABI3--SEPTIN2 1 0 1.0 0.0 ONLY_REF_SPLICE ABI3^ENSG00000108798.9 chr17:49210841:+ SEPTIN2^ENSG00000168385.18 chr2:241343752:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2112:6072:6927 . YES_LDAS 0.0102 GT 1.9656 AG 1.8892 "[""INTERCHROMOSOMAL[chr17--chr2]""]" chr17:49210841-chr2:241343752 False 0 Read count too low: 1 < 5 FAIL 1
ABI1--GALK2 1 0 1.0 0.0 ONLY_REF_SPLICE ABI1^ENSG00000136754.18 chr10:26823138:- GALK2^ENSG00000156958.15 chr15:49283566:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:1354:45576:7810 . YES_LDAS 0.0102 GT 1.8062 AG 1.8892 "[""INTERCHROMOSOMAL[chr10--chr15]""]" chr10:26823138-chr15:49283566 False 0 Read count too low: 1 < 5 FAIL 1
ABHD12--ZNF26 1 0 1.0 0.0 INCL_NON_REF_SPLICE ABHD12^ENSG00000100997.20 chr20:25390513:- ZNF26^ENSG00000198393.8 chr12:133012205:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:1334:22883:10991 . YES_LDAS 0.0102 GT 1.4716 AG 1.7465 "[""INTERCHROMOSOMAL[chr20--chr12]""]" chr20:25390513-chr12:133012205 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ABCF1--CD5 1 0 1.0 0.0 INCL_NON_REF_SPLICE ABCF1^ENSG00000204574.14 chr6:30578086:+ CD5^ENSG00000110448.11 chr11:61102486:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2337:12472:27455 . NO_LDAS 0.0102 GC 1.1033 AG 1.8256 "[""INTERCHROMOSOMAL[chr6--chr11]""]" chr6:30578086-chr11:61102486 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ABCC1--PTPN2 1 0 1.0 0.0 ONLY_REF_SPLICE ABCC1^ENSG00000103222.20 chr16:16102717:+ PTPN2^ENSG00000175354.20 chr18:12794485:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:3:2462:3629:9169 . YES_LDAS 0.0102 GT 1.7819 AG 1.9899 "[""INTERCHROMOSOMAL[chr16--chr18]""]" chr16:16102717-chr18:12794485 False 0 Read count too low: 1 < 5 FAIL 1
ABCC1--ABCC4 1 0 1.0 0.0 ONLY_REF_SPLICE ABCC1^ENSG00000103222.20 chr16:16056295:+ ABCC4^ENSG00000125257.16 chr13:95116001:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:2:1122:42008:22733 . YES_LDAS 0.0102 GT 1.7819 AG 1.6895 "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr16--chr13]""]" chr16:16056295-chr13:95116001 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
ABCB7--FGD2 1 0 1.0 0.0 ONLY_REF_SPLICE ABCB7^ENSG00000131269.19 chrX:75098942:- FGD2^ENSG00000146192.15 chr6:37013609:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2293:47291:9968 . YES_LDAS 0.0102 GT 1.7465 AG 1.7465 "[""INTERCHROMOSOMAL[chrX--chr6]""]" chrX:75098942-chr6:37013609 False 0 Read count too low: 1 < 5 FAIL 1
ABCB4--CROT 1 0 1.0 0.0 ONLY_REF_SPLICE ABCB4^ENSG00000005471.19 chr7:87426750:- CROT^ENSG00000005469.12 chr7:87398524:+ &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:4:2261:21079:12434 . YES_LDAS 0.0102 GT 1.9656 AG 1.4295 "[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""LOCAL_INVERSION:-:+:[1902]""]" chr7:87426750-chr7:87398524 False 0 Read count too low: 1 < 5 FAIL 1
ABCA7--SEPSECS 1 0 1.0 0.0 ONLY_REF_SPLICE ABCA7^ENSG00000064687.13 chr19:1049437:+ SEPSECS^ENSG00000109618.13 chr4:25159107:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2265:24202:27091 . YES_LDAS 0.0102 GT 1.5329 AG 1.8892 "[""INTERCHROMOSOMAL[chr19--chr4]""]" chr19:1049437-chr4:25159107 False 0 Read count too low: 1 < 5 FAIL 1
AARS2--ZXDC 1 0 1.0 0.0 ONLY_REF_SPLICE AARS2^ENSG00000124608.5 chr6:44310994:- ZXDC^ENSG00000070476.15 chr3:126462220:- &V4_0001_RNA_0005_23H5VFLT4_s43@LH00166:224:23H5VFLT4:1:2118:14437:18978 . YES_LDAS 0.0102 GT 1.6895 AG 1.7819 "[""INTERCHROMOSOMAL[chr6--chr3]""]" chr6:44310994-chr3:126462220 False 0 Read count too low: 1 < 5 FAIL 1
2115 rows