File Info
- Filename
- V4_0001_RNA_0005_23H5VFLT4_s43.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23H5VFLT4/nfcore_rnafusion_100M__5f1fa79--20260304-093157/fusioninspector/V4_0001_RNA_0005_23H5VFLT4_s43.FusionInspector.fusions.abridged.tsv
- Size
- 5.1 KB
- Workflow Run
- dev_rna_exp0001_5f1fa79
- Published
- Mar 04, 2026 6:21 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 948 | 4 | 948.00 | 4.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 24 | 454 | 38.12 | 2.09 | GT | 1.8892 | AG | 1.7819 | 9.7391 | 627 | 0 |
| TMPRSS2--ERG | 766 | 0 | 766.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 1 | 18 | 383.50 | 40.37 | GT | 1.6895 | AG | 1.9219 | 7.8363 | 1104 | 0 |
| TPM3--NTRK1 | 290 | 1 | 290.00 | 1.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 2017 | 4 | 0.14 | 58.40 | GT | 1.9329 | AG | 1.6895 | 2.9769 | 355 | 0 |
| FGFR3--BAIAP2L1 | 275 | 0 | 275.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 26 | 11 | 10.22 | 23.00 | GT | 1.8892 | AG | 1.8062 | 2.8133 | 1171 | 0 |
| ETV6--NTRK3 | 248 | 0 | 248.00 | 0.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 622 | 3 | 0.40 | 62.25 | GT | 1.7819 | AG | 1.9656 | 2.5371 | 1252 | 0 |
| LMNA--NTRK1 | 247 | 1 | 247.00 | 1.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 875 | 55 | 0.28 | 4.45 | GT | 1.7465 | AG | 1.5058 | 2.537 | 947 | 0 |
| NCOA4--RET | 219 | 2 | 219.00 | 2.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 619 | 47 | 0.36 | 4.62 | GT | 1.9086 | AG | 1.8323 | 2.2609 | 5144 | 0 |
| CCDC6--RET | 217 | 0 | 217.00 | 0.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 418 | 47 | 0.52 | 4.54 | GT | 1.8892 | AG | 1.8323 | 2.2199 | 2092 | 0 |
| KIF5B--RET | 142 | 2 | 142.00 | 2.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 288 | 7 | 0.50 | 18.12 | GT | 1.9656 | AG | 1.9656 | 1.4732 | 3178 | 0 |
| SLC34A2--ROS1 | 132 | 5 | 132.00 | 5.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 8 | 138.00 | 15.33 | GT | 1.8892 | AG | 1.7465 | 1.4016 | 999 | 0 |
| CD74--ROS1 | 120 | 2 | 120.00 | 1.95 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 8547 | 8 | 0.01 | 13.67 | GT | 1.7819 | AG | 1.7465 | 1.2475 | 2407 | 0 |
| CD74--ROS1 | 3 | 2 | 3.00 | 0.05 | CD74^ENSG00000019582.16 | 4992 | chr5:150404678:- | ROS1^ENSG00000047936.11 | 48732 | chr6:117324414:- | INCL_NON_REF_SPLICE | YES | 8547 | 8 | 0.00 | 0.67 | AC | 1.9329 | GA | 1.8295 | 0.0312 | 2408 | 0 |
| EML4--ALK | 95 | 0 | 95.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 140 | 21 | 0.68 | 4.36 | GT | 1.6895 | AG | 1.9086 | 0.9719 | 1550 | 0 |
| SLC45A3--BRAF | 88 | 0 | 88.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 378 | 89.00 | 0.23 | GT | 1.5628 | AG | 1.7465 | 0.9003 | 2599 | 0 |
| EGFR--SEPTIN14 | 83 | 1 | 83.00 | 1.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 2 | 4 | 28.33 | 17.00 | GT | 1.8892 | AG | 1.9899 | 0.8593 | 658 | 0 |
| TFG--NTRK1 | 81 | 2 | 81.00 | 2.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 340 | 4 | 0.25 | 16.80 | GT | 1.9329 | AG | 1.6895 | 0.8491 | 883 | 0 |
| PAX8--PPARG | 80 | 0 | 80.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 19 | 5 | 4.05 | 13.50 | GT | 1.8295 | AG | 1.9329 | 0.8184 | 1923 | 0 |
| RRAS2--TNFRSF13B | 7 | 0 | 7.00 | 0.00 | RRAS2^ENSG00000133818.14 | 2537 | chr11:14358763:- | TNFRSF13B^ENSG00000240505.9 | 22273 | chr17:16940511:- | ONLY_REF_SPLICE | YES | 275 | 781 | 0.03 | 0.01 | GT | 1.9329 | AG | 1.7819 | 0.0716 | 721 | 0 |
| P4HA1--TRIM25 | 3 | 0 | 3.00 | 0.00 | P4HA1^ENSG00000122884.12 | 18811 | chr10:73007479:- | TRIM25^ENSG00000121060.18 | 22442 | chr17:56913712:- | INCL_NON_REF_SPLICE | YES | 2 | 959 | 1.33 | 0.00 | CA | 1.7465 | CG | 1.2419 | 0.0307 | 729 | 0 |
| HAX1--SPTAN1 | 2 | 0 | 2.00 | 0.00 | HAX1^ENSG00000143575.15 | 1188 | chr1:154272776:+ | SPTAN1^ENSG00000197694.18 | 22594 | chr9:128584721:+ | ONLY_REF_SPLICE | YES | 384 | 341 | 0.01 | 0.01 | GT | 1.9086 | AG | 1.5656 | 0.0205 | 261 | 0 |
| MATR3--PARP8 | 2 | 0 | 1.00 | 0.00 | MATR3^ENSG00000280987.4 | 3171 | chr5:139278408:+ | PARP8^ENSG00000151883.19 | 49375 | chr5:50815432:+ | ONLY_REF_SPLICE | YES | 8 | 235 | 0.33 | 0.01 | GT | 1.8892 | AG | 1.9899 | 0.0102 | 4643 | 0 |
| OR2T2--OR2T27 | 2 | 0 | 2.00 | 0.00 | OR2T2^ENSG00000196240.5 | 3499 | chr1:248449392:+ | OR2T27^ENSG00000187701.4 | 12219 | chr1:248650888:- | ONLY_REF_SPLICE | YES | 5 | 20 | 0.50 | 0.14 | GT | 1.6402 | AG | 1.8323 | 0.0205 | 1100 | 0 |
| SNHG4--PARP8 | 2 | 0 | 1.00 | 0.00 | SNHG4^ENSG00000281398.4 | 3440 | chr5:139278408:+ | PARP8^ENSG00000151883.19 | 32452 | chr5:50815432:+ | ONLY_REF_SPLICE | YES | 9 | 235 | 0.30 | 0.01 | GT | 1.8892 | AG | 1.9899 | 0.0102 | 2112 | 0 |
| G3BP1--LARP1 | 1 | 0 | 1.00 | 0.00 | G3BP1^ENSG00000145907.16 | 1992 | chr5:151772036:+ | LARP1^ENSG00000155506.18 | 38090 | chr5:154790325:+ | ONLY_REF_SPLICE | YES | 157 | 687 | 0.01 | 0.00 | GT | 1.9086 | AG | 1.8892 | 0.0102 | 3084 | 0 |
| LARP1--G3BP1 | 1 | 0 | 1.00 | 0.00 | LARP1^ENSG00000155506.18 | 3105 | chr5:154756193:+ | G3BP1^ENSG00000145907.16 | 32756 | chr5:151786572:+ | ONLY_REF_SPLICE | YES | 640 | 202 | 0.00 | 0.01 | GT | 1.6729 | AG | 1.7465 | 0.0102 | 22 | 1 |
26 rows