NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (V4_0001_RNA_0005_23H5VFLT4_s37) - dev_rna_exp0001_5f1fa79 - Workflow Tracker

Runs
dev_rna_exp0001_5f1fa79
Tasks
GATK4_MARKDUPLICATES (V4_0001_RNA_0005_23H5VFLT4_s37)

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Task Info

Status: succeeded
Hash: 74ee20e1bd20
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: V4_0001_RNA_0005_23H5VFLT4_s37
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: ee/41a291
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ee/41a291e486279f72152a6b09e8030f
Native ID: nf-ee41a291e486279f72152a6b09e8030f-ee2ef

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.8 / 16
Memory (peak / alloc): 63.7 GB / 164.0 GB
Process I/O (rchar / wchar): 15.7 GB / 9.1 GB
Disk I/O (read / write): - / 9.1 GB
Host: i-0e75e561a4047d805 ( on-demand)

Runtime

Submitted: Mar 04, 2026 1:51:50 PM
Completed: Mar 04, 2026 2:07:14 PM
Total Duration: 15m 23s

Phases

Queue: 3s
Execution: 14m 29s
Stage/Unstage: 51s

Attempt 1

Execution

Status: aborted
Hash: 45/c18f53
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/45/c18f53d408d92a580a3f82147df88a
Native ID: nf-45c18f53d408d92a580a3f82147df88a-f38e7

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 8
Memory (peak / alloc): - / 82.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-053867ecf30f0f345 ( spot)

Runtime

Submitted: Mar 04, 2026 1:41:35 PM
Completed: Mar 04, 2026 1:51:50 PM
Total Duration: -

Phases

Queue: 16s
Execution: -
Stage/Unstage: -