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Quality_Metrics.csv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001_exp0003/B23H5VFLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L003/Reports/Quality_Metrics.csv
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Workflow Run
dev_rna_exp0001_exp0003_73d51683
Published
Jun 07, 2026 11:25 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
3 V4_0001_RNA_0005_23H5VFLT4_s01 GAGCAGTA TGAGCTGT 1 14743996360 14141236147 576675776395 39.11 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s01 GAGCAGTA TGAGCTGT 2 14743996360 13918222429 572045096191 38.80 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s02 AGTTCGTC ACTCGATC 1 13025443767 12467590488 508834850361 39.06 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s02 AGTTCGTC ACTCGATC 2 13025443767 12279792644 505025515286 38.77 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s03 TTGCGAAG AACACGCT 1 14003713424 13475995630 549070698898 39.21 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s03 TTGCGAAG AACACGCT 2 14003713424 13202460910 542954986069 38.77 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s04 ATCGCCAT TGCGTAAC 1 11782878508 11320293360 461537999346 39.17 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s04 ATCGCCAT TGCGTAAC 2 11782878508 11054795102 455598400127 38.67 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s05 TGGCATGT CGTCTTCA 1 11429517217 10945493872 446960955157 39.11 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s05 TGGCATGT CGTCTTCA 2 11429517217 10706800801 441637463635 38.64 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s06 CTGTTGAC ACCTCAGT 1 11843837812 11325062636 462688128929 39.07 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s06 CTGTTGAC ACCTCAGT 2 11843837812 11107781687 457881851423 38.66 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s07 CATACCAC AACAACCG 1 9870355241 9379648133 384098954972 38.91 0.95
3 V4_0001_RNA_0005_23H5VFLT4_s07 CATACCAC AACAACCG 2 9870355241 9206853055 380422477765 38.54 0.93
3 GM24385_0001_RNA_0001_23H5VFLT4_s08 GAAGTTGG CGAACAAC 1 11027677829 10462462270 428595076057 38.87 0.95
3 GM24385_0001_RNA_0001_23H5VFLT4_s08 GAAGTTGG CGAACAAC 2 11027677829 10333479832 426094879159 38.64 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s09 ATGACGTC CTTCCTTC 1 13634805475 13133827836 534540551592 39.20 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s09 ATGACGTC CTTCCTTC 2 13634805475 12926138248 530249611834 38.89 0.95
3 V4_0001_RNA_0005_23H5VFLT4_s10 TTGGACGT GAAGTGCT 1 13529845375 13089147635 532046817839 39.32 0.97
3 V4_0001_RNA_0005_23H5VFLT4_s10 TTGGACGT GAAGTGCT 2 13529845375 12810728889 525768096561 38.86 0.95
3 V4_0001_RNA_0005_23H5VFLT4_s11 AGTGGATC TCGATGAC 1 10928053012 10528969739 428587935722 39.22 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s11 AGTGGATC TCGATGAC 2 10928053012 10354417667 424797499451 38.87 0.95
3 V4_0001_RNA_0005_23H5VFLT4_s12 GATAGGCT CAGTCACA 1 14549405680 13929080996 568584426110 39.08 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s12 GATAGGCT CAGTCACA 2 14549405680 13696053747 563645937207 38.74 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s13 TGGTAGCT AGGTGTTG 1 12801489325 12273805093 500611122505 39.11 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s13 TGGTAGCT AGGTGTTG 2 12801489325 12056297951 495993930419 38.75 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s14 CGCAATCT ACAGGCAT 1 11775685170 11284242140 460380773783 39.10 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s14 CGCAATCT ACAGGCAT 2 11775685170 11076489026 455956551257 38.72 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s15 GATGTGTG TAGCCATG 1 10726137171 10249773677 418593261545 39.03 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s15 GATGTGTG TAGCCATG 2 10726137171 10081506438 415104021411 38.70 0.94
3 GM24385_0001_RNA_0001_23H5VFLT4_s16 GATTGCTC CACTTCAC 1 11156655083 10626051749 434663173370 38.96 0.95
3 GM24385_0001_RNA_0001_23H5VFLT4_s16 GATTGCTC CACTTCAC 2 11156655083 10458015689 431221854560 38.65 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s17 CGCTCTAT TTGCAACG 1 16860719041 16331170673 663548835668 39.35 0.97
3 V4_0001_RNA_0005_23H5VFLT4_s17 CGCTCTAT TTGCAACG 2 16860719041 15981601603 655603588987 38.88 0.95
3 V4_0001_RNA_0005_23H5VFLT4_s18 TATCGGTC TACCGGAT 1 13329722206 12797839413 521689282101 39.14 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s18 TATCGGTC TACCGGAT 2 13329722206 12571322532 516866646906 38.78 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s19 AACGTCTG AATGACGC 1 13446963589 12906564790 526107986908 39.12 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s19 AACGTCTG AATGACGC 2 13446963589 12682225505 521477673698 38.78 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s20 ACGTTCAG AGTTGTGC 1 12159041554 11626363934 474732178439 39.04 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s20 ACGTTCAG AGTTGTGC 2 12159041554 11435153879 470839029953 38.72 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s21 CAGTCCAA CGGTAATC 1 11318574346 10786851778 441066424855 38.97 0.95
3 V4_0001_RNA_0005_23H5VFLT4_s21 CAGTCCAA CGGTAATC 2 11318574346 10636429067 438014939024 38.70 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s22 TTGCAGAC ATCGTGGT 1 9885733534 9469876341 386486722557 39.10 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s22 TTGCAGAC ATCGTGGT 2 9885733534 9221078523 380934609420 38.53 0.93
3 V4_0001_RNA_0005_23H5VFLT4_s23 CAATGTGG TCTTCGAC 1 11080508803 10565045487 431928710388 38.98 0.95
3 V4_0001_RNA_0005_23H5VFLT4_s23 CAATGTGG TCTTCGAC 2 11080508803 10422682029 429031690875 38.72 0.94
3 GM24385_0001_RNA_0001_23H5VFLT4_s24 ACTCCATC GATCAAGG 1 8948412208 8489106994 347690142556 38.85 0.95
3 GM24385_0001_RNA_0001_23H5VFLT4_s24 ACTCCATC GATCAAGG 2 8948412208 8387612692 345838239622 38.65 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s25 GTTGACCT CAGTGCTT 1 16462429965 15838741545 645150719184 39.19 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s25 GTTGACCT CAGTGCTT 2 16462429965 15559276840 639131308477 38.82 0.95
3 V4_0001_RNA_0005_23H5VFLT4_s26 CGTGTGTA CCAACGAA 1 15536326278 14878228043 607067440769 39.07 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s26 CGTGTGTA CCAACGAA 2 15536326278 14635523822 602015669732 38.75 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s27 ACGACTTG AACAGCGA 1 13317022955 12779771470 520972779928 39.12 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s27 ACGACTTG AACAGCGA 2 13317022955 12551544403 516186295981 38.76 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s28 CACTAGCT TCGGATTC 1 9148310085 8741345967 357080578395 39.03 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s28 CACTAGCT TCGGATTC 2 9148310085 8602810722 354217309071 38.72 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s29 ACTAGGAG TATGGCAC 1 12116045663 11584267786 473238790768 39.06 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s29 ACTAGGAG TATGGCAC 2 12116045663 11396066126 469192712798 38.72 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s30 GTAGGAGT GTCCTAAG 1 9376426087 8942230347 365737562355 39.01 0.95
3 V4_0001_RNA_0005_23H5VFLT4_s30 GTAGGAGT GTCCTAAG 2 9376426087 8809353179 362869442861 38.70 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s31 CCTGATTG GCTCAGTT 1 11553473872 11029266753 450668844885 39.01 0.95
3 V4_0001_RNA_0005_23H5VFLT4_s31 CCTGATTG GCTCAGTT 2 11553473872 10854297200 447101846489 38.70 0.94
3 GM24385_0001_RNA_0001_23H5VFLT4_s32 ATGCACGA AGATCGTC 1 8914745097 8428115053 345790052416 38.79 0.95
3 GM24385_0001_RNA_0001_23H5VFLT4_s32 ATGCACGA AGATCGTC 2 8914745097 8252334534 342243847176 38.39 0.93
3 V4_0001_RNA_0005_23H5VFLT4_s33 CGACGTTA CTCTGGAT 1 13828800309 13261007924 540806529248 39.11 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s33 CGACGTTA CTCTGGAT 2 13828800309 13081537020 537154391130 38.84 0.95
3 V4_0001_RNA_0005_23H5VFLT4_s34 TACGCCTT GCTACTCT 1 13125500142 12567193513 512900557117 39.08 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s34 TACGCCTT GCTACTCT 2 13125500142 12360867443 508582548548 38.75 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s35 CCGTAAGA AGAGTCCA 1 9018030003 8622642571 352052191906 39.04 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s35 CCGTAAGA AGAGTCCA 2 9018030003 8324954743 344958804337 38.25 0.92
3 V4_0001_RNA_0005_23H5VFLT4_s36 ATCACACG GTAGCGTA 1 10831216863 10321195955 422024872832 38.96 0.95
3 V4_0001_RNA_0005_23H5VFLT4_s36 ATCACACG GTAGCGTA 2 10831216863 10003808969 414552043280 38.27 0.92
3 V4_0001_RNA_0005_23H5VFLT4_s37 CACCTGTT AGGATAGC 1 10569891582 10068363428 411735869282 38.95 0.95
3 V4_0001_RNA_0005_23H5VFLT4_s37 CACCTGTT AGGATAGC 2 10569891582 9839921243 406948269896 38.50 0.93
3 V4_0001_RNA_0005_23H5VFLT4_s38 CTTCGACT GATCTTGC 1 10292753732 9778035325 400425987802 38.90 0.95
3 V4_0001_RNA_0005_23H5VFLT4_s38 CTTCGACT GATCTTGC 2 10292753732 9620079493 397245778843 38.59 0.93
3 V4_0001_RNA_0005_23H5VFLT4_s39 TGCTTCCA CGATCGAT 1 9563501497 9078572050 371851113985 38.88 0.95
3 V4_0001_RNA_0005_23H5VFLT4_s39 TGCTTCCA CGATCGAT 2 9563501497 8947343809 369233551954 38.61 0.94
3 GM24385_0001_RNA_0001_23H5VFLT4_s40 AGAACGAG ATTAGCCG 1 9829861269 9263056318 380571662092 38.72 0.94
3 GM24385_0001_RNA_0001_23H5VFLT4_s40 AGAACGAG ATTAGCCG 2 9829861269 9152696977 378598608079 38.52 0.93
3 V4_0001_RNA_0005_23H5VFLT4_s41 GTTCTCGT TGTTCCGT 1 16230333150 15605609133 636022406265 39.19 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s41 GTTCTCGT TGTTCCGT 2 16230333150 15306514805 629446348085 38.78 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s42 TCAGGCTT ATCATGCG 1 13955902596 13400557540 546252936640 39.14 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s42 TCAGGCTT ATCATGCG 2 13955902596 13128522451 540413670088 38.72 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s43 CCTTGTAG CCTTGGAA 1 13476445131 12871792555 525823533214 39.02 0.96
3 V4_0001_RNA_0005_23H5VFLT4_s43 CCTTGTAG CCTTGGAA 2 13476445131 12687554797 522061032244 38.74 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s44 GAACATCG TCGACAAG 1 10548623987 10001455143 409885211364 38.86 0.95
3 V4_0001_RNA_0005_23H5VFLT4_s44 GAACATCG TCGACAAG 2 10548623987 9880625435 407563348859 38.64 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s45 TAACCGGT ATCGTCTC 1 10871092943 10337255581 423306553288 38.94 0.95
3 V4_0001_RNA_0005_23H5VFLT4_s45 TAACCGGT ATCGTCTC 2 10871092943 10105639152 418339534752 38.48 0.93
3 V4_0001_RNA_0005_23H5VFLT4_s46 AACCGTTC CTAGCTCA 1 9098628518 8656373587 354270632269 38.94 0.95
3 V4_0001_RNA_0005_23H5VFLT4_s46 AACCGTTC CTAGCTCA 2 9098628518 8510143064 351223268393 38.60 0.94
3 V4_0001_RNA_0005_23H5VFLT4_s47 TGGTACAG TCGAGAGT 1 11422226635 10799173348 443085608587 38.79 0.95
3 V4_0001_RNA_0005_23H5VFLT4_s47 TGGTACAG TCGAGAGT 2 11422226635 10661458884 440435537574 38.56 0.93
3 GM24385_0001_RNA_0001_23H5VFLT4_s48 ATATGCGC ACGATCAG 1 8284703939 7869927475 322432292776 38.92 0.95
3 GM24385_0001_RNA_0001_23H5VFLT4_s48 ATATGCGC ACGATCAG 2 8284703939 7730050064 319422882908 38.56 0.93
3 Undetermined 1 32317299199 27816298182 1192238950008 36.89 0.86
3 Undetermined 2 32317299199 27073451309 1170624526220 36.22 0.84
99 rows