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Filename
Demultiplex_Stats.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001_exp0003/B23H5VFLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L003/Reports/Demultiplex_Stats.csv
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5.3 KB
Workflow Run
dev_rna_exp0001_exp0003_73d51683
Published
Jun 07, 2026 11:25 PM

Content

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Lane SampleID Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
3 V4_0001_RNA_0005_23H5VFLT4_s01 GAGCAGTA-TGAGCTGT 97642360 95096795 2545565 0 0.0244 0.9739 0.0261 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s02 AGTTCGTC-ACTCGATC 86261217 84231521 2029696 0 0.0216 0.9765 0.0235 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s03 TTGCGAAG-AACACGCT 92739824 90476319 2263505 0 0.0232 0.9756 0.0244 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s04 ATCGCCAT-TGCGTAAC 78032308 76089167 1943141 0 0.0195 0.9751 0.0249 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s05 TGGCATGT-CGTCTTCA 75692167 73793746 1898421 0 0.0189 0.9749 0.0251 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s06 CTGTTGAC-ACCTCAGT 78436012 76462074 1973938 0 0.0196 0.9748 0.0252 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s07 CATACCAC-AACAACCG 65366591 63493174 1873417 0 0.0164 0.9713 0.0287 0.0000
3 GM24385_0001_RNA_0001_23H5VFLT4_s08 GAAGTTGG-CGAACAAC 73030979 70996645 2034334 0 0.0183 0.9721 0.0279 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s09 ATGACGTC-CTTCCTTC 90296725 88145067 2151658 0 0.0226 0.9762 0.0238 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s10 TTGGACGT-GAAGTGCT 89601625 87368481 2233144 0 0.0224 0.9751 0.0249 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s11 AGTGGATC-TCGATGAC 72371212 70663417 1707795 0 0.0181 0.9764 0.0236 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s12 GATAGGCT-CAGTCACA 96353680 94016101 2337579 0 0.0241 0.9757 0.0243 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s13 TGGTAGCT-AGGTGTTG 84778075 82509294 2268781 0 0.0212 0.9732 0.0268 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s14 CGCAATCT-ACAGGCAT 77984670 75845801 2138869 0 0.0195 0.9726 0.0274 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s15 GATGTGTG-TAGCCATG 71034021 69094900 1939121 0 0.0178 0.9727 0.0273 0.0000
3 GM24385_0001_RNA_0001_23H5VFLT4_s16 GATTGCTC-CACTTCAC 73885133 71963082 1922051 0 0.0185 0.9740 0.0260 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s17 CGCTCTAT-TTGCAACG 111660391 107489545 4170846 0 0.0279 0.9626 0.0374 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s18 TATCGGTC-TACCGGAT 88276306 86130971 2145335 0 0.0221 0.9757 0.0243 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s19 AACGTCTG-AATGACGC 89052739 86662115 2390624 0 0.0223 0.9732 0.0268 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s20 ACGTTCAG-AGTTGTGC 80523454 78413153 2110301 0 0.0201 0.9738 0.0262 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s21 CAGTCCAA-CGGTAATC 74957446 72748039 2209407 0 0.0188 0.9705 0.0295 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s22 TTGCAGAC-ATCGTGGT 65468434 63944929 1523505 0 0.0164 0.9767 0.0233 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s23 CAATGTGG-TCTTCGAC 73380853 71568706 1812147 0 0.0184 0.9753 0.0247 0.0000
3 GM24385_0001_RNA_0001_23H5VFLT4_s24 ACTCCATC-GATCAAGG 59261008 57763541 1497467 0 0.0148 0.9747 0.0253 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s25 GTTGACCT-CAGTGCTT 109022715 106337220 2685495 0 0.0273 0.9754 0.0246 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s26 CGTGTGTA-CCAACGAA 102889578 100466673 2422905 0 0.0257 0.9765 0.0235 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s27 ACGACTTG-AACAGCGA 88192205 85934799 2257406 0 0.0221 0.9744 0.0256 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s28 CACTAGCT-TCGGATTC 60584835 59089745 1495090 0 0.0152 0.9753 0.0247 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s29 ACTAGGAG-TATGGCAC 80238713 77977725 2260988 0 0.0201 0.9718 0.0282 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s30 GTAGGAGT-GTCCTAAG 62095537 60508487 1587050 0 0.0155 0.9744 0.0256 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s31 CCTGATTG-GCTCAGTT 76513072 74158289 2354783 0 0.0191 0.9692 0.0308 0.0000
3 GM24385_0001_RNA_0001_23H5VFLT4_s32 ATGCACGA-AGATCGTC 59038047 57317503 1720544 0 0.0148 0.9709 0.0291 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s33 CGACGTTA-CTCTGGAT 91581459 89017601 2563858 0 0.0229 0.9720 0.0280 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s34 TACGCCTT-GCTACTCT 86923842 84608487 2315355 0 0.0217 0.9734 0.0266 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s35 CCGTAAGA-AGAGTCCA 59722053 57964055 1757998 0 0.0149 0.9706 0.0294 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s36 ATCACACG-GTAGCGTA 71729913 69339474 2390439 0 0.0179 0.9667 0.0333 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s37 CACCTGTT-AGGATAGC 69999282 67871578 2127704 0 0.0175 0.9696 0.0304 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s38 CTTCGACT-GATCTTGC 68163932 66468849 1695083 0 0.0171 0.9751 0.0249 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s39 TGCTTCCA-CGATCGAT 63334447 61484112 1850335 0 0.0158 0.9708 0.0292 0.0000
3 GM24385_0001_RNA_0001_23H5VFLT4_s40 AGAACGAG-ATTAGCCG 65098419 60876895 4221524 0 0.0163 0.9352 0.0648 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s41 GTTCTCGT-TGTTCCGT 107485650 105020742 2464908 0 0.0269 0.9771 0.0229 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s42 TCAGGCTT-ATCATGCG 92423196 90060729 2362467 0 0.0231 0.9744 0.0256 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s43 CCTTGTAG-CCTTGGAA 89247981 87018393 2229588 0 0.0223 0.9750 0.0250 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s44 GAACATCG-TCGACAAG 69858437 67666632 2191805 0 0.0175 0.9686 0.0314 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s45 TAACCGGT-ATCGTCTC 71993993 70092778 1901215 0 0.0180 0.9736 0.0264 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s46 AACCGTTC-CTAGCTCA 60255818 58662419 1593399 0 0.0151 0.9736 0.0264 0.0000
3 V4_0001_RNA_0005_23H5VFLT4_s47 TGGTACAG-TCGAGAGT 75643885 73716663 1927222 0 0.0189 0.9745 0.0255 0.0000
3 GM24385_0001_RNA_0001_23H5VFLT4_s48 ATATGCGC-ACGATCAG 54865589 53466549 1399040 0 0.0137 0.9745 0.0255 0.0000
3 Undetermined 214021849 214021849 0 0 0.0535 1.0000 0.0000 0.0000
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