File Info
- Filename
- Adapter_Metrics.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001_exp0003/B23H5VFLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L005/Reports/Adapter_Metrics.csv
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- 7.3 KB
- Workflow Run
- dev_rna_exp0001_exp0003_73d51683
- Published
- Jun 07, 2026 11:29 PM
Content
View in new tab| Lane | Sample_ID | index | index2 | ReadNumber | AdapterBases | SampleBases | % Adapter Bases |
| 5 | tih_rna_sample_00248_23H5VFLT4_s01 | CTGATCGT | GCGCATAT | 1 | 0 | 11579476978 | 0.000 |
| 5 | tih_rna_sample_00248_23H5VFLT4_s01 | CTGATCGT | GCGCATAT | 2 | 0 | 11579476978 | 0.000 |
| 5 | tih_rna_sample_00088_23H5VFLT4_s02 | ACTCTCGA | CTGTACCA | 1 | 0 | 15468834865 | 0.000 |
| 5 | tih_rna_sample_00088_23H5VFLT4_s02 | ACTCTCGA | CTGTACCA | 2 | 0 | 15468834865 | 0.000 |
| 5 | tih_rna_sample_00251_23H5VFLT4_s03 | TGAGCTAG | GAACGGTT | 1 | 0 | 12733720978 | 0.000 |
| 5 | tih_rna_sample_00251_23H5VFLT4_s03 | TGAGCTAG | GAACGGTT | 2 | 0 | 12733720978 | 0.000 |
| 5 | tih_rna_sample_00252_23H5VFLT4_s04 | GAGACGAT | ACCGGTTA | 1 | 0 | 11645815808 | 0.000 |
| 5 | tih_rna_sample_00252_23H5VFLT4_s04 | GAGACGAT | ACCGGTTA | 2 | 0 | 11645815808 | 0.000 |
| 5 | tih_rna_sample_00254_23H5VFLT4_s05 | CTTGTCGA | CGATGTTC | 1 | 0 | 14245245172 | 0.000 |
| 5 | tih_rna_sample_00254_23H5VFLT4_s05 | CTTGTCGA | CGATGTTC | 2 | 0 | 14245245172 | 0.000 |
| 5 | tih_rna_sample_00261_23H5VFLT4_s06 | TTCCAAGG | CTACAAGG | 1 | 0 | 10863857174 | 0.000 |
| 5 | tih_rna_sample_00261_23H5VFLT4_s06 | TTCCAAGG | CTACAAGG | 2 | 0 | 10863857174 | 0.000 |
| 5 | tih_rna_sample_00235_23H5VFLT4_s07 | CGCATGAT | AAGCCTGA | 1 | 0 | 18337245814 | 0.000 |
| 5 | tih_rna_sample_00235_23H5VFLT4_s07 | CGCATGAT | AAGCCTGA | 2 | 0 | 18337245814 | 0.000 |
| 5 | tih_rna_sample_00127_23H5VFLT4_s08 | ACGGAACA | ACGAGAAC | 1 | 0 | 8669686895 | 0.000 |
| 5 | tih_rna_sample_00127_23H5VFLT4_s08 | ACGGAACA | ACGAGAAC | 2 | 0 | 8669686895 | 0.000 |
| 5 | tih_rna_sample_00272_23H5VFLT4_s09 | CGGCTAAT | CTCGTTCT | 1 | 0 | 13542247458 | 0.000 |
| 5 | tih_rna_sample_00272_23H5VFLT4_s09 | CGGCTAAT | CTCGTTCT | 2 | 0 | 13542247458 | 0.000 |
| 5 | tih_rna_sample_00218_23H5VFLT4_s10 | ATCGATCG | TGGAAGCA | 1 | 0 | 12958653296 | 0.000 |
| 5 | tih_rna_sample_00218_23H5VFLT4_s10 | ATCGATCG | TGGAAGCA | 2 | 0 | 12958653296 | 0.000 |
| 5 | tih_rna_sample_00096_23H5VFLT4_s11 | GCAAGATC | AGTCGAAG | 1 | 0 | 11489934582 | 0.000 |
| 5 | tih_rna_sample_00096_23H5VFLT4_s11 | GCAAGATC | AGTCGAAG | 2 | 0 | 11489934582 | 0.000 |
| 5 | tih_rna_sample_00097_23H5VFLT4_s12 | GCTATCCT | AACAGGTG | 1 | 0 | 13648682073 | 0.000 |
| 5 | tih_rna_sample_00097_23H5VFLT4_s12 | GCTATCCT | AACAGGTG | 2 | 0 | 13648682073 | 0.000 |
| 5 | V4_0001_RNA_0001_23H5VFLT4_s13 | TACGCTAC | CGTGTGAT | 1 | 0 | 14190701405 | 0.000 |
| 5 | V4_0001_RNA_0001_23H5VFLT4_s13 | TACGCTAC | CGTGTGAT | 2 | 0 | 14190701405 | 0.000 |
| 5 | tih_rna_sample_00274_23H5VFLT4_s14 | TGGACTCT | TCTTACGG | 1 | 0 | 7508592327 | 0.000 |
| 5 | tih_rna_sample_00274_23H5VFLT4_s14 | TGGACTCT | TCTTACGG | 2 | 0 | 7508592327 | 0.000 |
| 5 | NTC_0001_0001_23H5VFLT4_s15 | AGAGTAGC | AAGGCGTA | 1 | 0 | 7975367 | 0.000 |
| 5 | NTC_0001_0001_23H5VFLT4_s15 | AGAGTAGC | AAGGCGTA | 2 | 0 | 7975367 | 0.000 |
| 5 | tih_rna_sample_00220_23H5VFLT4_s16 | ATCCAGAG | TAACGTCG | 1 | 0 | 11628148204 | 0.000 |
| 5 | tih_rna_sample_00220_23H5VFLT4_s16 | ATCCAGAG | TAACGTCG | 2 | 0 | 11628148204 | 0.000 |
| 5 | tih_rna_sample_00087_23H5VFLT4_s17 | GACGATCT | TCGTGCAT | 1 | 0 | 15487058300 | 0.000 |
| 5 | tih_rna_sample_00087_23H5VFLT4_s17 | GACGATCT | TCGTGCAT | 2 | 0 | 15487058300 | 0.000 |
| 5 | tih_rna_sample_00280_23H5VFLT4_s18 | AACTGAGC | CAATCAGG | 1 | 0 | 16880849757 | 0.000 |
| 5 | tih_rna_sample_00280_23H5VFLT4_s18 | AACTGAGC | CAATCAGG | 2 | 0 | 16880849757 | 0.000 |
| 5 | HD789_0002_RNA_0008_23H5VFLT4_s19 | CTTAGGAC | ACTCCTAC | 1 | 0 | 18077534270 | 0.000 |
| 5 | HD789_0002_RNA_0008_23H5VFLT4_s19 | CTTAGGAC | ACTCCTAC | 2 | 0 | 18077534270 | 0.000 |
| 5 | tih_rna_sample_00104_23H5VFLT4_s20 | GTGCCATA | CTCCTAGT | 1 | 0 | 7950244526 | 0.000 |
| 5 | tih_rna_sample_00104_23H5VFLT4_s20 | GTGCCATA | CTCCTAGT | 2 | 0 | 7950244526 | 0.000 |
| 5 | tih_rna_sample_00105_23H5VFLT4_s21 | GAATCCGA | AGCTAGTG | 1 | 0 | 2139242368 | 0.000 |
| 5 | tih_rna_sample_00105_23H5VFLT4_s21 | GAATCCGA | AGCTAGTG | 2 | 0 | 2139242368 | 0.000 |
| 5 | tih_rna_sample_00388_23H5VFLT4_s22 | TCGCTGTT | CAAGTCGT | 1 | 0 | 20338709289 | 0.000 |
| 5 | tih_rna_sample_00388_23H5VFLT4_s22 | TCGCTGTT | CAAGTCGT | 2 | 0 | 20338709289 | 0.000 |
| 5 | tih_rna_sample_00377_23H5VFLT4_s23 | TTCGTTGG | TACACACG | 1 | 0 | 15264480827 | 0.000 |
| 5 | tih_rna_sample_00377_23H5VFLT4_s23 | TTCGTTGG | TACACACG | 2 | 0 | 15264480827 | 0.000 |
| 5 | tih_rna_sample_00378_23H5VFLT4_s24 | AAGCACTG | AGGTCAAC | 1 | 0 | 6684952408 | 0.000 |
| 5 | tih_rna_sample_00378_23H5VFLT4_s24 | AAGCACTG | AGGTCAAC | 2 | 0 | 6684952408 | 0.000 |
| 5 | tih_rna_sample_00394_23H5VFLT4_s25 | CCTTGATC | GATGGAGT | 1 | 0 | 7375774690 | 0.000 |
| 5 | tih_rna_sample_00394_23H5VFLT4_s25 | CCTTGATC | GATGGAGT | 2 | 0 | 7375774690 | 0.000 |
| 5 | tih_rna_sample_00396_23H5VFLT4_s26 | GTCGAAGA | CCACATTG | 1 | 0 | 15795481991 | 0.000 |
| 5 | tih_rna_sample_00396_23H5VFLT4_s26 | GTCGAAGA | CCACATTG | 2 | 0 | 15795481991 | 0.000 |
| 5 | tih_rna_sample_00400_23H5VFLT4_s27 | ACCACGAT | GTCTGCAA | 1 | 0 | 15593705976 | 0.000 |
| 5 | tih_rna_sample_00400_23H5VFLT4_s27 | ACCACGAT | GTCTGCAA | 2 | 0 | 15593705976 | 0.000 |
| 5 | tih_rna_sample_00402_23H5VFLT4_s28 | GATTACCG | TTGGACTG | 1 | 0 | 14737713401 | 0.000 |
| 5 | tih_rna_sample_00402_23H5VFLT4_s28 | GATTACCG | TTGGACTG | 2 | 0 | 14737713401 | 0.000 |
| 5 | tih_rna_sample_00403_23H5VFLT4_s29 | GCACAACT | CTGAACGT | 1 | 0 | 12187505054 | 0.000 |
| 5 | tih_rna_sample_00403_23H5VFLT4_s29 | GCACAACT | CTGAACGT | 2 | 0 | 12187505054 | 0.000 |
| 5 | tih_rna_sample_00111_23H5VFLT4_s30 | GCGTCATT | CAGACGTT | 1 | 0 | 6432695281 | 0.000 |
| 5 | tih_rna_sample_00111_23H5VFLT4_s30 | GCGTCATT | CAGACGTT | 2 | 0 | 6432695281 | 0.000 |
| 5 | tih_rna_sample_00124_23H5VFLT4_s31 | ATCCGGTA | GACCGATA | 1 | 0 | 13145404962 | 0.000 |
| 5 | tih_rna_sample_00124_23H5VFLT4_s31 | ATCCGGTA | GACCGATA | 2 | 0 | 13145404962 | 0.000 |
| 5 | tih_rna_sample_00090_23H5VFLT4_s32 | CGTTGCAA | ATAGAGCG | 1 | 0 | 13220026293 | 0.000 |
| 5 | tih_rna_sample_00090_23H5VFLT4_s32 | CGTTGCAA | ATAGAGCG | 2 | 0 | 13220026293 | 0.000 |
| 5 | tih_rna_sample_00407_23H5VFLT4_s33 | GTGAAGTG | GAGCAATC | 1 | 0 | 10791172418 | 0.000 |
| 5 | tih_rna_sample_00407_23H5VFLT4_s33 | GTGAAGTG | GAGCAATC | 2 | 0 | 10791172418 | 0.000 |
| 5 | tih_rna_sample_00410_23H5VFLT4_s34 | CATGGCTA | CACACATC | 1 | 0 | 10505343914 | 0.000 |
| 5 | tih_rna_sample_00410_23H5VFLT4_s34 | CATGGCTA | CACACATC | 2 | 0 | 10505343914 | 0.000 |
| 5 | tih_rna_sample_00115_23H5VFLT4_s35 | ATGCCTGT | AGATTGCG | 1 | 0 | 9511017672 | 0.000 |
| 5 | tih_rna_sample_00115_23H5VFLT4_s35 | ATGCCTGT | AGATTGCG | 2 | 0 | 9511017672 | 0.000 |
| 5 | tih_rna_sample_00116_23H5VFLT4_s36 | CAACACCT | AGCTACCA | 1 | 0 | 13314627642 | 0.000 |
| 5 | tih_rna_sample_00116_23H5VFLT4_s36 | CAACACCT | AGCTACCA | 2 | 0 | 13314627642 | 0.000 |
| 5 | tih_rna_sample_00117_23H5VFLT4_s37 | TGTGACTG | AGCCTATC | 1 | 0 | 7908580153 | 0.000 |
| 5 | tih_rna_sample_00117_23H5VFLT4_s37 | TGTGACTG | AGCCTATC | 2 | 0 | 7908580153 | 0.000 |
| 5 | tih_rna_sample_00118_23H5VFLT4_s38 | GTCATCGA | GATCCACT | 1 | 0 | 12656827097 | 0.000 |
| 5 | tih_rna_sample_00118_23H5VFLT4_s38 | GTCATCGA | GATCCACT | 2 | 0 | 12656827097 | 0.000 |
| 5 | tih_rna_sample_00089_23H5VFLT4_s39 | AGCACTTC | ACGTCCAA | 1 | 0 | 14595099337 | 0.000 |
| 5 | tih_rna_sample_00089_23H5VFLT4_s39 | AGCACTTC | ACGTCCAA | 2 | 0 | 14595099337 | 0.000 |
| 5 | tih_rna_sample_00414_23H5VFLT4_s40 | GAAGGAAG | GACGTCAT | 1 | 0 | 13720733837 | 0.000 |
| 5 | tih_rna_sample_00414_23H5VFLT4_s40 | GAAGGAAG | GACGTCAT | 2 | 0 | 13720733837 | 0.000 |
| 5 | tih_rna_sample_00121_23H5VFLT4_s41 | GTTGTTCG | CCAACTTC | 1 | 0 | 11603623539 | 0.000 |
| 5 | tih_rna_sample_00121_23H5VFLT4_s41 | GTTGTTCG | CCAACTTC | 2 | 0 | 11603623539 | 0.000 |
| 5 | tih_rna_sample_00122_23H5VFLT4_s42 | CGGTTGTT | GTGGTATG | 1 | 0 | 8104768866 | 0.000 |
| 5 | tih_rna_sample_00122_23H5VFLT4_s42 | CGGTTGTT | GTGGTATG | 2 | 0 | 8104768866 | 0.000 |
| 5 | tih_rna_sample_00163_23H5VFLT4_s43 | ACTGAGGT | GTCAACAG | 1 | 0 | 15009873989 | 0.000 |
| 5 | tih_rna_sample_00163_23H5VFLT4_s43 | ACTGAGGT | GTCAACAG | 2 | 0 | 15009873989 | 0.000 |
| 5 | tih_rna_sample_00419_23H5VFLT4_s44 | TGAAGACG | ACATGCCA | 1 | 0 | 16209356381 | 0.000 |
| 5 | tih_rna_sample_00419_23H5VFLT4_s44 | TGAAGACG | ACATGCCA | 2 | 0 | 16209356381 | 0.000 |
| 5 | tih_rna_sample_00420_23H5VFLT4_s45 | GTTACGCA | ATGGCGAT | 1 | 0 | 7461575759 | 0.000 |
| 5 | tih_rna_sample_00420_23H5VFLT4_s45 | GTTACGCA | ATGGCGAT | 2 | 0 | 7461575759 | 0.000 |
| 5 | tih_rna_sample_00425_23H5VFLT4_s46 | AGCGTGTT | CTTCGCAA | 1 | 0 | 8951506047 | 0.000 |
| 5 | tih_rna_sample_00425_23H5VFLT4_s46 | AGCGTGTT | CTTCGCAA | 2 | 0 | 8951506047 | 0.000 |
| 5 | tih_rna_sample_00422_23H5VFLT4_s47 | GATCGAGT | GACGAACT | 1 | 0 | 3327717917 | 0.000 |
| 5 | tih_rna_sample_00422_23H5VFLT4_s47 | GATCGAGT | GACGAACT | 2 | 0 | 3327717917 | 0.000 |
| 5 | tih_rna_sample_00426_23H5VFLT4_s48 | ACAGCTCA | TACTGCTC | 1 | 0 | 10935911052 | 0.000 |
| 5 | tih_rna_sample_00426_23H5VFLT4_s48 | ACAGCTCA | TACTGCTC | 2 | 0 | 10935911052 | 0.000 |
| 5 | Undetermined | 1 | 0 | 36498902486 | 0.000 | ||
| 5 | Undetermined | 2 | 0 | 36498902486 | 0.000 |
99 rows