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Quality_Metrics.csv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001_exp0003/B23H5VFLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L005/Reports/Quality_Metrics.csv
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dev_rna_exp0001_exp0003_73d51683
Published
Jun 07, 2026 11:29 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
5 tih_rna_sample_00248_23H5VFLT4_s01 CTGATCGT GCGCATAT 1 11579476978 11048198987 451992513185 39.03 0.95
5 tih_rna_sample_00248_23H5VFLT4_s01 CTGATCGT GCGCATAT 2 11579476978 10838081594 447759475895 38.67 0.94
5 tih_rna_sample_00088_23H5VFLT4_s02 ACTCTCGA CTGTACCA 1 15468834865 14691731251 601830100378 38.91 0.95
5 tih_rna_sample_00088_23H5VFLT4_s02 ACTCTCGA CTGTACCA 2 15468834865 14577302512 600228446908 38.80 0.94
5 tih_rna_sample_00251_23H5VFLT4_s03 TGAGCTAG GAACGGTT 1 12733720978 12155250743 497061912875 39.04 0.95
5 tih_rna_sample_00251_23H5VFLT4_s03 TGAGCTAG GAACGGTT 2 12733720978 12068729409 495600281523 38.92 0.95
5 tih_rna_sample_00252_23H5VFLT4_s04 GAGACGAT ACCGGTTA 1 11645815808 11160598013 455649082394 39.13 0.96
5 tih_rna_sample_00252_23H5VFLT4_s04 GAGACGAT ACCGGTTA 2 11645815808 10982637932 452053795382 38.82 0.94
5 tih_rna_sample_00254_23H5VFLT4_s05 CTTGTCGA CGATGTTC 1 14245245172 13369838814 550495478319 38.64 0.94
5 tih_rna_sample_00254_23H5VFLT4_s05 CTTGTCGA CGATGTTC 2 14245245172 13331517464 550719498959 38.66 0.94
5 tih_rna_sample_00261_23H5VFLT4_s06 TTCCAAGG CTACAAGG 1 10863857174 10323490539 423054768204 38.94 0.95
5 tih_rna_sample_00261_23H5VFLT4_s06 TTCCAAGG CTACAAGG 2 10863857174 10259271492 422000077023 38.84 0.94
5 tih_rna_sample_00235_23H5VFLT4_s07 CGCATGAT AAGCCTGA 1 18337245814 17575303398 717397482726 39.12 0.96
5 tih_rna_sample_00235_23H5VFLT4_s07 CGCATGAT AAGCCTGA 2 18337245814 17399275443 714014364750 38.94 0.95
5 tih_rna_sample_00127_23H5VFLT4_s08 ACGGAACA ACGAGAAC 1 8669686895 8094782921 333976992725 38.52 0.93
5 tih_rna_sample_00127_23H5VFLT4_s08 ACGGAACA ACGAGAAC 2 8669686895 8142108116 335876953709 38.74 0.94
5 tih_rna_sample_00272_23H5VFLT4_s09 CGGCTAAT CTCGTTCT 1 13542247458 12963916436 529373644355 39.09 0.96
5 tih_rna_sample_00272_23H5VFLT4_s09 CGGCTAAT CTCGTTCT 2 13542247458 12844380470 527272508804 38.94 0.95
5 tih_rna_sample_00218_23H5VFLT4_s10 ATCGATCG TGGAAGCA 1 12958653296 12387614275 506126695564 39.06 0.96
5 tih_rna_sample_00218_23H5VFLT4_s10 ATCGATCG TGGAAGCA 2 12958653296 12326677556 505394499041 39.00 0.95
5 tih_rna_sample_00096_23H5VFLT4_s11 GCAAGATC AGTCGAAG 1 11489934582 10988437850 448957842035 39.07 0.96
5 tih_rna_sample_00096_23H5VFLT4_s11 GCAAGATC AGTCGAAG 2 11489934582 10906466977 447555023041 38.95 0.95
5 tih_rna_sample_00097_23H5VFLT4_s12 GCTATCCT AACAGGTG 1 13648682073 12907528160 529952013635 38.83 0.95
5 tih_rna_sample_00097_23H5VFLT4_s12 GCTATCCT AACAGGTG 2 13648682073 12903723596 530591368022 38.87 0.95
5 V4_0001_RNA_0001_23H5VFLT4_s13 TACGCTAC CGTGTGAT 1 14190701405 13721963240 558173512619 39.33 0.97
5 V4_0001_RNA_0001_23H5VFLT4_s13 TACGCTAC CGTGTGAT 2 14190701405 13372264654 550236722422 38.77 0.94
5 tih_rna_sample_00274_23H5VFLT4_s14 TGGACTCT TCTTACGG 1 7508592327 7034183332 289973583331 38.62 0.94
5 tih_rna_sample_00274_23H5VFLT4_s14 TGGACTCT TCTTACGG 2 7508592327 7041127225 290600360332 38.70 0.94
5 NTC_0001_0001_23H5VFLT4_s15 AGAGTAGC AAGGCGTA 1 7975367 5281786 259440448 32.53 0.66
5 NTC_0001_0001_23H5VFLT4_s15 AGAGTAGC AAGGCGTA 2 7975367 6049950 281550987 35.30 0.76
5 tih_rna_sample_00220_23H5VFLT4_s16 ATCCAGAG TAACGTCG 1 11628148204 11101845553 453825439762 39.03 0.95
5 tih_rna_sample_00220_23H5VFLT4_s16 ATCCAGAG TAACGTCG 2 11628148204 11020779454 452629361110 38.93 0.95
5 tih_rna_sample_00087_23H5VFLT4_s17 GACGATCT TCGTGCAT 1 15487058300 14857641150 606289608927 39.15 0.96
5 tih_rna_sample_00087_23H5VFLT4_s17 GACGATCT TCGTGCAT 2 15487058300 14704655797 603415309552 38.96 0.95
5 tih_rna_sample_00280_23H5VFLT4_s18 AACTGAGC CAATCAGG 1 16880849757 16296547887 663356905938 39.30 0.97
5 tih_rna_sample_00280_23H5VFLT4_s18 AACTGAGC CAATCAGG 2 16880849757 16054635676 658238622964 38.99 0.95
5 HD789_0002_RNA_0008_23H5VFLT4_s19 CTTAGGAC ACTCCTAC 1 18077534270 17514596996 711834603782 39.38 0.97
5 HD789_0002_RNA_0008_23H5VFLT4_s19 CTTAGGAC ACTCCTAC 2 18077534270 17220914833 705477444400 39.03 0.95
5 tih_rna_sample_00104_23H5VFLT4_s20 GTGCCATA CTCCTAGT 1 7950244526 7370835844 305094283099 38.38 0.93
5 tih_rna_sample_00104_23H5VFLT4_s20 GTGCCATA CTCCTAGT 2 7950244526 7381640045 306072739031 38.50 0.93
5 tih_rna_sample_00105_23H5VFLT4_s21 GAATCCGA AGCTAGTG 1 2139242368 1909649373 80439552024 37.60 0.89
5 tih_rna_sample_00105_23H5VFLT4_s21 GAATCCGA AGCTAGTG 2 2139242368 1946022265 81542206381 38.12 0.91
5 tih_rna_sample_00388_23H5VFLT4_s22 TCGCTGTT CAAGTCGT 1 20338709289 19614939515 798409824851 39.26 0.96
5 tih_rna_sample_00388_23H5VFLT4_s22 TCGCTGTT CAAGTCGT 2 20338709289 19345699100 793094426939 38.99 0.95
5 tih_rna_sample_00377_23H5VFLT4_s23 TTCGTTGG TACACACG 1 15264480827 14574514794 596023065864 39.05 0.95
5 tih_rna_sample_00377_23H5VFLT4_s23 TTCGTTGG TACACACG 2 15264480827 14454806205 593825543889 38.90 0.95
5 tih_rna_sample_00378_23H5VFLT4_s24 AAGCACTG AGGTCAAC 1 6684952408 6224001527 257167067948 38.47 0.93
5 tih_rna_sample_00378_23H5VFLT4_s24 AAGCACTG AGGTCAAC 2 6684952408 6268275894 258781127616 38.71 0.94
5 tih_rna_sample_00394_23H5VFLT4_s25 CCTTGATC GATGGAGT 1 7375774690 6943238863 285548238934 38.71 0.94
5 tih_rna_sample_00394_23H5VFLT4_s25 CCTTGATC GATGGAGT 2 7375774690 6908912721 285279538920 38.68 0.94
5 tih_rna_sample_00396_23H5VFLT4_s26 GTCGAAGA CCACATTG 1 15795481991 15180170021 618766798406 39.17 0.96
5 tih_rna_sample_00396_23H5VFLT4_s26 GTCGAAGA CCACATTG 2 15795481991 15046233568 616431181021 39.03 0.95
5 tih_rna_sample_00400_23H5VFLT4_s27 ACCACGAT GTCTGCAA 1 15593705976 14791000284 606467020935 38.89 0.95
5 tih_rna_sample_00400_23H5VFLT4_s27 ACCACGAT GTCTGCAA 2 15593705976 14689601355 604914816654 38.79 0.94
5 tih_rna_sample_00402_23H5VFLT4_s28 GATTACCG TTGGACTG 1 14737713401 14038085521 574579961062 38.99 0.95
5 tih_rna_sample_00402_23H5VFLT4_s28 GATTACCG TTGGACTG 2 14737713401 13966327661 573690423911 38.93 0.95
5 tih_rna_sample_00403_23H5VFLT4_s29 GCACAACT CTGAACGT 1 12187505054 11556622769 473818780982 38.88 0.95
5 tih_rna_sample_00403_23H5VFLT4_s29 GCACAACT CTGAACGT 2 12187505054 11520394343 473726227355 38.87 0.95
5 tih_rna_sample_00111_23H5VFLT4_s30 GCGTCATT CAGACGTT 1 6432695281 6076371500 249522593981 38.79 0.94
5 tih_rna_sample_00111_23H5VFLT4_s30 GCGTCATT CAGACGTT 2 6432695281 6029321856 248835494841 38.68 0.94
5 tih_rna_sample_00124_23H5VFLT4_s31 ATCCGGTA GACCGATA 1 13145404962 12552988702 513117448294 39.03 0.95
5 tih_rna_sample_00124_23H5VFLT4_s31 ATCCGGTA GACCGATA 2 13145404962 12460203506 511700726999 38.93 0.95
5 tih_rna_sample_00090_23H5VFLT4_s32 CGTTGCAA ATAGAGCG 1 13220026293 12408982947 510903285495 38.65 0.94
5 tih_rna_sample_00090_23H5VFLT4_s32 CGTTGCAA ATAGAGCG 2 13220026293 12334383732 510287709345 38.60 0.93
5 tih_rna_sample_00407_23H5VFLT4_s33 GTGAAGTG GAGCAATC 1 10791172418 10281991233 420683233485 38.98 0.95
5 tih_rna_sample_00407_23H5VFLT4_s33 GTGAAGTG GAGCAATC 2 10791172418 10167078712 418531822378 38.78 0.94
5 tih_rna_sample_00410_23H5VFLT4_s34 CATGGCTA CACACATC 1 10505343914 9930417035 407661903746 38.81 0.95
5 tih_rna_sample_00410_23H5VFLT4_s34 CATGGCTA CACACATC 2 10505343914 9892986404 407488822979 38.79 0.94
5 tih_rna_sample_00115_23H5VFLT4_s35 ATGCCTGT AGATTGCG 1 9511017672 8961962020 368991356758 38.80 0.94
5 tih_rna_sample_00115_23H5VFLT4_s35 ATGCCTGT AGATTGCG 2 9511017672 8736678477 364179331866 38.29 0.92
5 tih_rna_sample_00116_23H5VFLT4_s36 CAACACCT AGCTACCA 1 13314627642 12487280970 514398949371 38.63 0.94
5 tih_rna_sample_00116_23H5VFLT4_s36 CAACACCT AGCTACCA 2 13314627642 12426931070 514005305600 38.60 0.93
5 tih_rna_sample_00117_23H5VFLT4_s37 TGTGACTG AGCCTATC 1 7908580153 7486937598 307192464057 38.84 0.95
5 tih_rna_sample_00117_23H5VFLT4_s37 TGTGACTG AGCCTATC 2 7908580153 7395867140 305540024048 38.63 0.94
5 tih_rna_sample_00118_23H5VFLT4_s38 GTCATCGA GATCCACT 1 12656827097 12080912038 493807695298 39.02 0.95
5 tih_rna_sample_00118_23H5VFLT4_s38 GTCATCGA GATCCACT 2 12656827097 11991630134 492542310410 38.92 0.95
5 tih_rna_sample_00089_23H5VFLT4_s39 AGCACTTC ACGTCCAA 1 14595099337 13994391106 571086892663 39.13 0.96
5 tih_rna_sample_00089_23H5VFLT4_s39 AGCACTTC ACGTCCAA 2 14595099337 13849770382 568392773452 38.94 0.95
5 tih_rna_sample_00414_23H5VFLT4_s40 GAAGGAAG GACGTCAT 1 13720733837 13165438171 537236437255 39.16 0.96
5 tih_rna_sample_00414_23H5VFLT4_s40 GAAGGAAG GACGTCAT 2 13720733837 12963922854 533235763248 38.86 0.94
5 tih_rna_sample_00121_23H5VFLT4_s41 GTTGTTCG CCAACTTC 1 11603623539 10934335590 449406324063 38.73 0.94
5 tih_rna_sample_00121_23H5VFLT4_s41 GTTGTTCG CCAACTTC 2 11603623539 10902158391 449556037617 38.74 0.94
5 tih_rna_sample_00122_23H5VFLT4_s42 CGGTTGTT GTGGTATG 1 8104768866 7536722487 311536797525 38.44 0.93
5 tih_rna_sample_00122_23H5VFLT4_s42 CGGTTGTT GTGGTATG 2 8104768866 7573270197 313122133179 38.63 0.93
5 tih_rna_sample_00163_23H5VFLT4_s43 ACTGAGGT GTCAACAG 1 15009873989 14362135977 586769563140 39.09 0.96
5 tih_rna_sample_00163_23H5VFLT4_s43 ACTGAGGT GTCAACAG 2 15009873989 14225539663 584158638367 38.92 0.95
5 tih_rna_sample_00419_23H5VFLT4_s44 TGAAGACG ACATGCCA 1 16209356381 15492918996 632974873119 39.05 0.96
5 tih_rna_sample_00419_23H5VFLT4_s44 TGAAGACG ACATGCCA 2 16209356381 15345182133 630512584923 38.90 0.95
5 tih_rna_sample_00420_23H5VFLT4_s45 GTTACGCA ATGGCGAT 1 7461575759 7078631632 290130729502 38.88 0.95
5 tih_rna_sample_00420_23H5VFLT4_s45 GTTACGCA ATGGCGAT 2 7461575759 7012355565 289076494947 38.74 0.94
5 tih_rna_sample_00425_23H5VFLT4_s46 AGCGTGTT CTTCGCAA 1 8951506047 8381593264 345527076928 38.60 0.94
5 tih_rna_sample_00425_23H5VFLT4_s46 AGCGTGTT CTTCGCAA 2 8951506047 8373321418 345949333432 38.65 0.94
5 tih_rna_sample_00422_23H5VFLT4_s47 GATCGAGT GACGAACT 1 3327717917 3055501227 127167399105 38.21 0.92
5 tih_rna_sample_00422_23H5VFLT4_s47 GATCGAGT GACGAACT 2 3327717917 3060624358 127547952412 38.33 0.92
5 tih_rna_sample_00426_23H5VFLT4_s48 ACAGCTCA TACTGCTC 1 10935911052 10404404467 425906178751 38.95 0.95
5 tih_rna_sample_00426_23H5VFLT4_s48 ACAGCTCA TACTGCTC 2 10935911052 10245811556 422845424924 38.67 0.94
5 Undetermined 1 36498902486 31608354487 1351458431521 37.03 0.87
5 Undetermined 2 36498902486 31021095879 1333842091983 36.54 0.85
99 rows