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Filename
Demultiplex_Stats.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001_exp0003/B23H5VFLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L005/Reports/Demultiplex_Stats.csv
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5.4 KB
Workflow Run
dev_rna_exp0001_exp0003_73d51683
Published
Jun 07, 2026 11:29 PM

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Lane SampleID Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
5 tih_rna_sample_00248_23H5VFLT4_s01 CTGATCGT-GCGCATAT 76685278 75071635 1613643 0 0.0193 0.9790 0.0210 0.0000
5 tih_rna_sample_00088_23H5VFLT4_s02 ACTCTCGA-CTGTACCA 102442615 100777808 1664807 0 0.0257 0.9837 0.0163 0.0000
5 tih_rna_sample_00251_23H5VFLT4_s03 TGAGCTAG-GAACGGTT 84329278 81954166 2375112 0 0.0212 0.9718 0.0282 0.0000
5 tih_rna_sample_00252_23H5VFLT4_s04 GAGACGAT-ACCGGTTA 77124608 75392715 1731893 0 0.0194 0.9775 0.0225 0.0000
5 tih_rna_sample_00254_23H5VFLT4_s05 CTTGTCGA-CGATGTTC 94339372 92574700 1764672 0 0.0237 0.9813 0.0187 0.0000
5 tih_rna_sample_00261_23H5VFLT4_s06 TTCCAAGG-CTACAAGG 71946074 70691121 1254953 0 0.0181 0.9826 0.0174 0.0000
5 tih_rna_sample_00235_23H5VFLT4_s07 CGCATGAT-AAGCCTGA 121438714 118951614 2487100 0 0.0305 0.9795 0.0205 0.0000
5 tih_rna_sample_00127_23H5VFLT4_s08 ACGGAACA-ACGAGAAC 57415145 56281460 1133685 0 0.0144 0.9803 0.0197 0.0000
5 tih_rna_sample_00272_23H5VFLT4_s09 CGGCTAAT-CTCGTTCT 89683758 88428685 1255073 0 0.0225 0.9860 0.0140 0.0000
5 tih_rna_sample_00218_23H5VFLT4_s10 ATCGATCG-TGGAAGCA 85818896 80453558 5365338 0 0.0216 0.9375 0.0625 0.0000
5 tih_rna_sample_00096_23H5VFLT4_s11 GCAAGATC-AGTCGAAG 76092282 74333201 1759081 0 0.0191 0.9769 0.0231 0.0000
5 tih_rna_sample_00097_23H5VFLT4_s12 GCTATCCT-AACAGGTG 90388623 88823531 1565092 0 0.0227 0.9827 0.0173 0.0000
5 V4_0001_RNA_0001_23H5VFLT4_s13 TACGCTAC-CGTGTGAT 93978155 91897520 2080635 0 0.0236 0.9779 0.0221 0.0000
5 tih_rna_sample_00274_23H5VFLT4_s14 TGGACTCT-TCTTACGG 49725777 48927564 798213 0 0.0125 0.9839 0.0161 0.0000
5 NTC_0001_0001_23H5VFLT4_s15 AGAGTAGC-AAGGCGTA 52817 51672 1145 0 0.0000 0.9783 0.0217 0.0000
5 tih_rna_sample_00220_23H5VFLT4_s16 ATCCAGAG-TAACGTCG 77007604 75207485 1800119 0 0.0194 0.9766 0.0234 0.0000
5 tih_rna_sample_00087_23H5VFLT4_s17 GACGATCT-TCGTGCAT 102563300 100600225 1963075 0 0.0258 0.9809 0.0191 0.0000
5 tih_rna_sample_00280_23H5VFLT4_s18 AACTGAGC-CAATCAGG 111793707 110013096 1780611 0 0.0281 0.9841 0.0159 0.0000
5 HD789_0002_RNA_0008_23H5VFLT4_s19 CTTAGGAC-ACTCCTAC 119718770 117385374 2333396 0 0.0301 0.9805 0.0195 0.0000
5 tih_rna_sample_00104_23H5VFLT4_s20 GTGCCATA-CTCCTAGT 52650626 51354957 1295669 0 0.0132 0.9754 0.0246 0.0000
5 tih_rna_sample_00105_23H5VFLT4_s21 GAATCCGA-AGCTAGTG 14167168 13859993 307175 0 0.0036 0.9783 0.0217 0.0000
5 tih_rna_sample_00388_23H5VFLT4_s22 TCGCTGTT-CAAGTCGT 134693439 132184446 2508993 0 0.0338 0.9814 0.0186 0.0000
5 tih_rna_sample_00377_23H5VFLT4_s23 TTCGTTGG-TACACACG 101089277 99145220 1944057 0 0.0254 0.9808 0.0192 0.0000
5 tih_rna_sample_00378_23H5VFLT4_s24 AAGCACTG-AGGTCAAC 44271208 43360073 911135 0 0.0111 0.9794 0.0206 0.0000
5 tih_rna_sample_00394_23H5VFLT4_s25 CCTTGATC-GATGGAGT 48846190 47954478 891712 0 0.0123 0.9817 0.0183 0.0000
5 tih_rna_sample_00396_23H5VFLT4_s26 GTCGAAGA-CCACATTG 104605841 102750466 1855375 0 0.0263 0.9823 0.0177 0.0000
5 tih_rna_sample_00400_23H5VFLT4_s27 ACCACGAT-GTCTGCAA 103269576 101293281 1976295 0 0.0259 0.9809 0.0191 0.0000
5 tih_rna_sample_00402_23H5VFLT4_s28 GATTACCG-TTGGACTG 97600751 95769337 1831414 0 0.0245 0.9812 0.0188 0.0000
5 tih_rna_sample_00403_23H5VFLT4_s29 GCACAACT-CTGAACGT 80711954 79286432 1425522 0 0.0203 0.9823 0.0177 0.0000
5 tih_rna_sample_00111_23H5VFLT4_s30 GCGTCATT-CAGACGTT 42600631 41663780 936851 0 0.0107 0.9780 0.0220 0.0000
5 tih_rna_sample_00124_23H5VFLT4_s31 ATCCGGTA-GACCGATA 87055662 85544185 1511477 0 0.0219 0.9826 0.0174 0.0000
5 tih_rna_sample_00090_23H5VFLT4_s32 CGTTGCAA-ATAGAGCG 87549843 85708656 1841187 0 0.0220 0.9790 0.0210 0.0000
5 tih_rna_sample_00407_23H5VFLT4_s33 GTGAAGTG-GAGCAATC 71464718 69940487 1524231 0 0.0180 0.9787 0.0213 0.0000
5 tih_rna_sample_00410_23H5VFLT4_s34 CATGGCTA-CACACATC 69571814 68553028 1018786 0 0.0175 0.9854 0.0146 0.0000
5 tih_rna_sample_00115_23H5VFLT4_s35 ATGCCTGT-AGATTGCG 62986872 61718286 1268586 0 0.0158 0.9799 0.0201 0.0000
5 tih_rna_sample_00116_23H5VFLT4_s36 CAACACCT-AGCTACCA 88176342 85950591 2225751 0 0.0222 0.9748 0.0252 0.0000
5 tih_rna_sample_00117_23H5VFLT4_s37 TGTGACTG-AGCCTATC 52374703 51063755 1310948 0 0.0132 0.9750 0.0250 0.0000
5 tih_rna_sample_00118_23H5VFLT4_s38 GTCATCGA-GATCCACT 83820047 82340798 1479249 0 0.0211 0.9824 0.0176 0.0000
5 tih_rna_sample_00089_23H5VFLT4_s39 AGCACTTC-ACGTCCAA 96656287 94461223 2195064 0 0.0243 0.9773 0.0227 0.0000
5 tih_rna_sample_00414_23H5VFLT4_s40 GAAGGAAG-GACGTCAT 90865787 88734539 2131248 0 0.0228 0.9765 0.0235 0.0000
5 tih_rna_sample_00121_23H5VFLT4_s41 GTTGTTCG-CCAACTTC 76845189 75595993 1249196 0 0.0193 0.9837 0.0163 0.0000
5 tih_rna_sample_00122_23H5VFLT4_s42 CGGTTGTT-GTGGTATG 53673966 52643095 1030871 0 0.0135 0.9808 0.0192 0.0000
5 tih_rna_sample_00163_23H5VFLT4_s43 ACTGAGGT-GTCAACAG 99403139 97282773 2120366 0 0.0250 0.9787 0.0213 0.0000
5 tih_rna_sample_00419_23H5VFLT4_s44 TGAAGACG-ACATGCCA 107346731 105035664 2311067 0 0.0270 0.9785 0.0215 0.0000
5 tih_rna_sample_00420_23H5VFLT4_s45 GTTACGCA-ATGGCGAT 49414409 48546963 867446 0 0.0124 0.9824 0.0176 0.0000
5 tih_rna_sample_00425_23H5VFLT4_s46 AGCGTGTT-CTTCGCAA 59281497 58173517 1107980 0 0.0149 0.9813 0.0187 0.0000
5 tih_rna_sample_00422_23H5VFLT4_s47 GATCGAGT-GACGAACT 22037867 21652366 385501 0 0.0055 0.9825 0.0175 0.0000
5 tih_rna_sample_00426_23H5VFLT4_s48 ACAGCTCA-TACTGCTC 72423252 71352400 1070852 0 0.0182 0.9852 0.0148 0.0000
5 Undetermined 241714586 241714586 0 0 0.0607 1.0000 0.0000 0.0000
50 rows