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Quality_Metrics.csv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001_exp0003/B23H5VFLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L007/Reports/Quality_Metrics.csv
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dev_rna_exp0001_exp0003_73d51683
Published
Jun 07, 2026 11:32 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
7 tih_rna_sample_00248_23H5VFLT4_s01 CTGATCGT GCGCATAT 1 11645320679 11152509285 455302482507 39.10 0.96
7 tih_rna_sample_00248_23H5VFLT4_s01 CTGATCGT GCGCATAT 2 11645320679 10949670548 451348132499 38.76 0.94
7 tih_rna_sample_00088_23H5VFLT4_s02 ACTCTCGA CTGTACCA 1 15701697401 14983756502 612387739277 39.00 0.95
7 tih_rna_sample_00088_23H5VFLT4_s02 ACTCTCGA CTGTACCA 2 15701697401 14861393024 610597932173 38.89 0.95
7 tih_rna_sample_00251_23H5VFLT4_s03 TGAGCTAG GAACGGTT 1 12995033877 12454465687 508209427621 39.11 0.96
7 tih_rna_sample_00251_23H5VFLT4_s03 TGAGCTAG GAACGGTT 2 12995033877 12366505951 506791935886 39.00 0.95
7 tih_rna_sample_00252_23H5VFLT4_s04 GAGACGAT ACCGGTTA 1 11865676489 11418127161 465143632848 39.20 0.96
7 tih_rna_sample_00252_23H5VFLT4_s04 GAGACGAT ACCGGTTA 2 11865676489 11240199800 461602266548 38.90 0.95
7 tih_rna_sample_00254_23H5VFLT4_s05 CTTGTCGA CGATGTTC 1 14193225068 13387151869 549859875466 38.74 0.94
7 tih_rna_sample_00254_23H5VFLT4_s05 CTTGTCGA CGATGTTC 2 14193225068 13338981236 549884670578 38.74 0.94
7 tih_rna_sample_00261_23H5VFLT4_s06 TTCCAAGG CTACAAGG 1 11100340086 10594448260 433153136413 39.02 0.95
7 tih_rna_sample_00261_23H5VFLT4_s06 TTCCAAGG CTACAAGG 2 11100340086 10529271054 432143261316 38.93 0.95
7 tih_rna_sample_00235_23H5VFLT4_s07 CGCATGAT AAGCCTGA 1 18848615317 18142406499 738874438908 39.20 0.96
7 tih_rna_sample_00235_23H5VFLT4_s07 CGCATGAT AAGCCTGA 2 18848615317 17963096634 735547396074 39.02 0.95
7 tih_rna_sample_00127_23H5VFLT4_s08 ACGGAACA ACGAGAAC 1 8728111060 8189784268 337110991762 38.62 0.94
7 tih_rna_sample_00127_23H5VFLT4_s08 ACGGAACA ACGAGAAC 2 8728111060 8226017535 338738017530 38.81 0.94
7 tih_rna_sample_00272_23H5VFLT4_s09 CGGCTAAT CTCGTTCT 1 13709703740 13180405865 537011171504 39.17 0.96
7 tih_rna_sample_00272_23H5VFLT4_s09 CGGCTAAT CTCGTTCT 2 13709703740 13060055514 534959245968 39.02 0.95
7 tih_rna_sample_00218_23H5VFLT4_s10 ATCGATCG TGGAAGCA 1 13393820498 12857623799 524188726232 39.14 0.96
7 tih_rna_sample_00218_23H5VFLT4_s10 ATCGATCG TGGAAGCA 2 13393820498 12788848364 523337620499 39.07 0.95
7 tih_rna_sample_00096_23H5VFLT4_s11 GCAAGATC AGTCGAAG 1 11807342320 11338175305 462249597424 39.15 0.96
7 tih_rna_sample_00096_23H5VFLT4_s11 GCAAGATC AGTCGAAG 2 11807342320 11252009433 460823230677 39.03 0.95
7 tih_rna_sample_00097_23H5VFLT4_s12 GCTATCCT AACAGGTG 1 13799990415 13107530941 536903691406 38.91 0.95
7 tih_rna_sample_00097_23H5VFLT4_s12 GCTATCCT AACAGGTG 2 13799990415 13100210517 537568487094 38.95 0.95
7 V4_0001_RNA_0001_23H5VFLT4_s13 TACGCTAC CGTGTGAT 1 14682996890 14247291266 578428786427 39.39 0.97
7 V4_0001_RNA_0001_23H5VFLT4_s13 TACGCTAC CGTGTGAT 2 14682996890 13899787702 570602656399 38.86 0.95
7 tih_rna_sample_00274_23H5VFLT4_s14 TGGACTCT TCTTACGG 1 7458236243 7016130880 288573504574 38.69 0.94
7 tih_rna_sample_00274_23H5VFLT4_s14 TGGACTCT TCTTACGG 2 7458236243 7020804556 289201389994 38.78 0.94
7 NTC_0001_0001_23H5VFLT4_s15 AGAGTAGC AAGGCGTA 1 7553473 4993927 245384491 32.49 0.66
7 NTC_0001_0001_23H5VFLT4_s15 AGAGTAGC AAGGCGTA 2 7553473 5825038 268353709 35.53 0.77
7 tih_rna_sample_00220_23H5VFLT4_s16 ATCCAGAG TAACGTCG 1 11814317161 11330470732 462127081597 39.12 0.96
7 tih_rna_sample_00220_23H5VFLT4_s16 ATCCAGAG TAACGTCG 2 11814317161 11244000936 460827423033 39.01 0.95
7 tih_rna_sample_00087_23H5VFLT4_s17 GACGATCT TCGTGCAT 1 15763737563 15182303892 618226767213 39.22 0.96
7 tih_rna_sample_00087_23H5VFLT4_s17 GACGATCT TCGTGCAT 2 15763737563 15031435683 615505142388 39.05 0.95
7 tih_rna_sample_00280_23H5VFLT4_s18 AACTGAGC CAATCAGG 1 17425711211 16879034546 685788856292 39.35 0.97
7 tih_rna_sample_00280_23H5VFLT4_s18 AACTGAGC CAATCAGG 2 17425711211 16642119887 680890175549 39.07 0.96
7 HD789_0002_RNA_0008_23H5VFLT4_s19 CTTAGGAC ACTCCTAC 1 18833049029 18310802123 742779683699 39.44 0.97
7 HD789_0002_RNA_0008_23H5VFLT4_s19 CTTAGGAC ACTCCTAC 2 18833049029 18016283691 736493650770 39.11 0.96
7 tih_rna_sample_00104_23H5VFLT4_s20 GTGCCATA CTCCTAGT 1 7911924803 7372113608 304393947008 38.47 0.93
7 tih_rna_sample_00104_23H5VFLT4_s20 GTGCCATA CTCCTAGT 2 7911924803 7373313105 305159815230 38.57 0.93
7 tih_rna_sample_00105_23H5VFLT4_s21 GAATCCGA AGCTAGTG 1 2136232485 1918619551 80601681067 37.73 0.90
7 tih_rna_sample_00105_23H5VFLT4_s21 GAATCCGA AGCTAGTG 2 2136232485 1949809820 81566480942 38.18 0.91
7 tih_rna_sample_00388_23H5VFLT4_s22 TCGCTGTT CAAGTCGT 1 21196991930 20531966245 833888439277 39.34 0.97
7 tih_rna_sample_00388_23H5VFLT4_s22 TCGCTGTT CAAGTCGT 2 21196991930 20253871858 828433086553 39.08 0.96
7 tih_rna_sample_00377_23H5VFLT4_s23 TTCGTTGG TACACACG 1 15535209482 14888442445 607604254069 39.11 0.96
7 tih_rna_sample_00377_23H5VFLT4_s23 TTCGTTGG TACACACG 2 15535209482 14769249109 605531807275 38.98 0.95
7 tih_rna_sample_00378_23H5VFLT4_s24 AAGCACTG AGGTCAAC 1 6703575540 6272948190 258562343301 38.57 0.94
7 tih_rna_sample_00378_23H5VFLT4_s24 AAGCACTG AGGTCAAC 2 6703575540 6305967781 259915604935 38.77 0.94
7 tih_rna_sample_00394_23H5VFLT4_s25 CCTTGATC GATGGAGT 1 7392221761 6988293441 286753336578 38.79 0.95
7 tih_rna_sample_00394_23H5VFLT4_s25 CCTTGATC GATGGAGT 2 7392221761 6951404873 286479245213 38.75 0.94
7 tih_rna_sample_00396_23H5VFLT4_s26 GTCGAAGA CCACATTG 1 16273986344 15705843557 638842194602 39.26 0.97
7 tih_rna_sample_00396_23H5VFLT4_s26 GTCGAAGA CCACATTG 2 16273986344 15565705615 636395611894 39.11 0.96
7 tih_rna_sample_00400_23H5VFLT4_s27 ACCACGAT GTCTGCAA 1 15721090784 14976619506 612662294034 38.97 0.95
7 tih_rna_sample_00400_23H5VFLT4_s27 ACCACGAT GTCTGCAA 2 15721090784 14873127465 611173010256 38.88 0.95
7 tih_rna_sample_00402_23H5VFLT4_s28 GATTACCG TTGGACTG 1 15111316091 14463382868 590628658637 39.09 0.96
7 tih_rna_sample_00402_23H5VFLT4_s28 GATTACCG TTGGACTG 2 15111316091 14380552568 589457911634 39.01 0.95
7 tih_rna_sample_00403_23H5VFLT4_s29 GCACAACT CTGAACGT 1 12175436379 11595938355 474348209541 38.96 0.95
7 tih_rna_sample_00403_23H5VFLT4_s29 GCACAACT CTGAACGT 2 12175436379 11555521855 474212432395 38.95 0.95
7 tih_rna_sample_00111_23H5VFLT4_s30 GCGTCATT CAGACGTT 1 6444602839 6114895925 250524843182 38.87 0.95
7 tih_rna_sample_00111_23H5VFLT4_s30 GCGTCATT CAGACGTT 2 6444602839 6065362797 249815272863 38.76 0.94
7 tih_rna_sample_00124_23H5VFLT4_s31 ATCCGGTA GACCGATA 1 13374050672 12830240590 523252952848 39.12 0.96
7 tih_rna_sample_00124_23H5VFLT4_s31 ATCCGGTA GACCGATA 2 13374050672 12730608336 521696150418 39.01 0.95
7 tih_rna_sample_00090_23H5VFLT4_s32 CGTTGCAA ATAGAGCG 1 13355083109 12596559027 517412037393 38.74 0.94
7 tih_rna_sample_00090_23H5VFLT4_s32 CGTTGCAA ATAGAGCG 2 13355083109 12512803701 516595122285 38.68 0.94
7 tih_rna_sample_00407_23H5VFLT4_s33 GTGAAGTG GAGCAATC 1 10973270566 10506550628 428863709072 39.08 0.96
7 tih_rna_sample_00407_23H5VFLT4_s33 GTGAAGTG GAGCAATC 2 10973270566 10381602337 426488987191 38.87 0.95
7 tih_rna_sample_00410_23H5VFLT4_s34 CATGGCTA CACACATC 1 10566387023 10035755920 411019681807 38.90 0.95
7 tih_rna_sample_00410_23H5VFLT4_s34 CATGGCTA CACACATC 2 10566387023 9988856382 410639664159 38.86 0.95
7 tih_rna_sample_00115_23H5VFLT4_s35 ATGCCTGT AGATTGCG 1 9424555525 8902632877 365967303265 38.83 0.94
7 tih_rna_sample_00115_23H5VFLT4_s35 ATGCCTGT AGATTGCG 2 9424555525 8682048824 361352265821 38.34 0.92
7 tih_rna_sample_00116_23H5VFLT4_s36 CAACACCT AGCTACCA 1 13352791080 12579943023 516988078272 38.72 0.94
7 tih_rna_sample_00116_23H5VFLT4_s36 CAACACCT AGCTACCA 2 13352791080 12512488152 516518142237 38.68 0.94
7 tih_rna_sample_00117_23H5VFLT4_s37 TGTGACTG AGCCTATC 1 7957178899 7568672252 309794840897 38.93 0.95
7 tih_rna_sample_00117_23H5VFLT4_s37 TGTGACTG AGCCTATC 2 7957178899 7471336286 308039087771 38.71 0.94
7 tih_rna_sample_00118_23H5VFLT4_s38 GTCATCGA GATCCACT 1 12898906824 12366198926 504385076762 39.10 0.96
7 tih_rna_sample_00118_23H5VFLT4_s38 GTCATCGA GATCCACT 2 12898906824 12271854686 503006111744 39.00 0.95
7 tih_rna_sample_00089_23H5VFLT4_s39 AGCACTTC ACGTCCAA 1 14911276274 14358067582 584653510789 39.21 0.96
7 tih_rna_sample_00089_23H5VFLT4_s39 AGCACTTC ACGTCCAA 2 14911276274 14209906524 581933321445 39.03 0.95
7 tih_rna_sample_00414_23H5VFLT4_s40 GAAGGAAG GACGTCAT 1 13884406059 13370270040 544524424089 39.22 0.96
7 tih_rna_sample_00414_23H5VFLT4_s40 GAAGGAAG GACGTCAT 2 13884406059 13171498915 540670814893 38.94 0.95
7 tih_rna_sample_00121_23H5VFLT4_s41 GTTGTTCG CCAACTTC 1 11738256649 11113838567 455679740039 38.82 0.95
7 tih_rna_sample_00121_23H5VFLT4_s41 GTTGTTCG CCAACTTC 2 11738256649 11072270483 455671375292 38.82 0.94
7 tih_rna_sample_00122_23H5VFLT4_s42 CGGTTGTT GTGGTATG 1 8072778157 7542456144 311018931138 38.53 0.93
7 tih_rna_sample_00122_23H5VFLT4_s42 CGGTTGTT GTGGTATG 2 8072778157 7570538704 312453852388 38.70 0.94
7 tih_rna_sample_00163_23H5VFLT4_s43 ACTGAGGT GTCAACAG 1 15257044379 14652984756 597421447794 39.16 0.96
7 tih_rna_sample_00163_23H5VFLT4_s43 ACTGAGGT GTCAACAG 2 15257044379 14519129354 594994567394 39.00 0.95
7 tih_rna_sample_00419_23H5VFLT4_s44 TGAAGACG ACATGCCA 1 16649551883 15984047297 651638159879 39.14 0.96
7 tih_rna_sample_00419_23H5VFLT4_s44 TGAAGACG ACATGCCA 2 16649551883 15828575320 648995232622 38.98 0.95
7 tih_rna_sample_00420_23H5VFLT4_s45 GTTACGCA ATGGCGAT 1 7534529144 7183207153 293740111921 38.99 0.95
7 tih_rna_sample_00420_23H5VFLT4_s45 GTTACGCA ATGGCGAT 2 7534529144 7111791937 292539857077 38.83 0.94
7 tih_rna_sample_00425_23H5VFLT4_s46 AGCGTGTT CTTCGCAA 1 8866325135 8340408155 343004721608 38.69 0.94
7 tih_rna_sample_00425_23H5VFLT4_s46 AGCGTGTT CTTCGCAA 2 8866325135 8327761678 343365045832 38.73 0.94
7 tih_rna_sample_00422_23H5VFLT4_s47 GATCGAGT GACGAACT 1 3244691020 2988855257 124147038863 38.26 0.92
7 tih_rna_sample_00422_23H5VFLT4_s47 GATCGAGT GACGAACT 2 3244691020 2994771343 124586871415 38.40 0.92
7 tih_rna_sample_00426_23H5VFLT4_s48 ACAGCTCA TACTGCTC 1 11136865778 10646184423 434809265271 39.04 0.96
7 tih_rna_sample_00426_23H5VFLT4_s48 ACAGCTCA TACTGCTC 2 11136865778 10481409019 431596494679 38.75 0.94
7 Undetermined 1 37864637237 33349969599 1414051671093 37.34 0.88
7 Undetermined 2 37864637237 32635899828 1394597435583 36.83 0.86
99 rows