Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
7,tih_rna_sample_00248_23H5VFLT4_s01,CTGATCGT-GCGCATAT,77121329,75583069,1538260,0,0.0190,0.9801,0.0199,0.0000
7,tih_rna_sample_00088_23H5VFLT4_s02,ACTCTCGA-CTGTACCA,103984751,102345149,1639602,0,0.0257,0.9842,0.0158,0.0000
7,tih_rna_sample_00251_23H5VFLT4_s03,TGAGCTAG-GAACGGTT,86059827,83821053,2238774,0,0.0213,0.9740,0.0260,0.0000
7,tih_rna_sample_00252_23H5VFLT4_s04,GAGACGAT-ACCGGTTA,78580639,76914280,1666359,0,0.0194,0.9788,0.0212,0.0000
7,tih_rna_sample_00254_23H5VFLT4_s05,CTTGTCGA-CGATGTTC,93994868,92334244,1660624,0,0.0232,0.9823,0.0177,0.0000
7,tih_rna_sample_00261_23H5VFLT4_s06,TTCCAAGG-CTACAAGG,73512186,72297081,1215105,0,0.0182,0.9835,0.0165,0.0000
7,tih_rna_sample_00235_23H5VFLT4_s07,CGCATGAT-AAGCCTGA,124825267,122363673,2461594,0,0.0308,0.9803,0.0197,0.0000
7,tih_rna_sample_00127_23H5VFLT4_s08,ACGGAACA-ACGAGAAC,57802060,56730920,1071140,0,0.0143,0.9815,0.0185,0.0000
7,tih_rna_sample_00272_23H5VFLT4_s09,CGGCTAAT-CTCGTTCT,90792740,89534426,1258314,0,0.0224,0.9861,0.0139,0.0000
7,tih_rna_sample_00218_23H5VFLT4_s10,ATCGATCG-TGGAAGCA,88700798,83557778,5143020,0,0.0219,0.9420,0.0580,0.0000
7,tih_rna_sample_00096_23H5VFLT4_s11,GCAAGATC-AGTCGAAG,78194320,76461011,1733309,0,0.0193,0.9778,0.0222,0.0000
7,tih_rna_sample_00097_23H5VFLT4_s12,GCTATCCT-AACAGGTG,91390665,89845517,1545148,0,0.0226,0.9831,0.0169,0.0000
7,V4_0001_RNA_0001_23H5VFLT4_s13,TACGCTAC-CGTGTGAT,97238390,95252462,1985928,0,0.0240,0.9796,0.0204,0.0000
7,tih_rna_sample_00274_23H5VFLT4_s14,TGGACTCT-TCTTACGG,49392293,48627474,764819,0,0.0122,0.9845,0.0155,0.0000
7,NTC_0001_0001_23H5VFLT4_s15,AGAGTAGC-AAGGCGTA,50023,48999,1024,0,0.0000,0.9795,0.0205,0.0000
7,tih_rna_sample_00220_23H5VFLT4_s16,ATCCAGAG-TAACGTCG,78240511,76574556,1665955,0,0.0193,0.9787,0.0213,0.0000
7,tih_rna_sample_00087_23H5VFLT4_s17,GACGATCT-TCGTGCAT,104395613,102495816,1899797,0,0.0258,0.9818,0.0182,0.0000
7,tih_rna_sample_00280_23H5VFLT4_s18,AACTGAGC-CAATCAGG,115402061,113633472,1768589,0,0.0285,0.9847,0.0153,0.0000
7,HD789_0002_RNA_0008_23H5VFLT4_s19,CTTAGGAC-ACTCCTAC,124722179,122416266,2305913,0,0.0308,0.9815,0.0185,0.0000
7,tih_rna_sample_00104_23H5VFLT4_s20,GTGCCATA-CTCCTAGT,52396853,51271955,1124898,0,0.0129,0.9785,0.0215,0.0000
7,tih_rna_sample_00105_23H5VFLT4_s21,GAATCCGA-AGCTAGTG,14147235,13859099,288136,0,0.0035,0.9796,0.0204,0.0000
7,tih_rna_sample_00388_23H5VFLT4_s22,TCGCTGTT-CAAGTCGT,140377430,137787616,2589814,0,0.0347,0.9816,0.0184,0.0000
7,tih_rna_sample_00377_23H5VFLT4_s23,TTCGTTGG-TACACACG,102882182,100967633,1914549,0,0.0254,0.9814,0.0186,0.0000
7,tih_rna_sample_00378_23H5VFLT4_s24,AAGCACTG-AGGTCAAC,44394540,43520885,873655,0,0.0110,0.9803,0.0197,0.0000
7,tih_rna_sample_00394_23H5VFLT4_s25,CCTTGATC-GATGGAGT,48955111,48096300,858811,0,0.0121,0.9825,0.0175,0.0000
7,tih_rna_sample_00396_23H5VFLT4_s26,GTCGAAGA-CCACATTG,107774744,105948617,1826127,0,0.0266,0.9831,0.0169,0.0000
7,tih_rna_sample_00400_23H5VFLT4_s27,ACCACGAT-GTCTGCAA,104113184,102199514,1913670,0,0.0257,0.9816,0.0184,0.0000
7,tih_rna_sample_00402_23H5VFLT4_s28,GATTACCG-TTGGACTG,100074941,98239854,1835087,0,0.0247,0.9817,0.0183,0.0000
7,tih_rna_sample_00403_23H5VFLT4_s29,GCACAACT-CTGAACGT,80632029,79251956,1380073,0,0.0199,0.9829,0.0171,0.0000
7,tih_rna_sample_00111_23H5VFLT4_s30,GCGTCATT-CAGACGTT,42679489,41771492,907997,0,0.0105,0.9787,0.0213,0.0000
7,tih_rna_sample_00124_23H5VFLT4_s31,ATCCGGTA-GACCGATA,88569872,87061184,1508688,0,0.0219,0.9830,0.0170,0.0000
7,tih_rna_sample_00090_23H5VFLT4_s32,CGTTGCAA-ATAGAGCG,88444259,86653308,1790951,0,0.0218,0.9798,0.0202,0.0000
7,tih_rna_sample_00407_23H5VFLT4_s33,GTGAAGTG-GAGCAATC,72670666,71171732,1498934,0,0.0179,0.9794,0.0206,0.0000
7,tih_rna_sample_00410_23H5VFLT4_s34,CATGGCTA-CACACATC,69976073,69001846,974227,0,0.0173,0.9861,0.0139,0.0000
7,tih_rna_sample_00115_23H5VFLT4_s35,ATGCCTGT-AGATTGCG,62414275,61190501,1223774,0,0.0154,0.9804,0.0196,0.0000
7,tih_rna_sample_00116_23H5VFLT4_s36,CAACACCT-AGCTACCA,88429080,86326380,2102700,0,0.0218,0.9762,0.0238,0.0000
7,tih_rna_sample_00117_23H5VFLT4_s37,TGTGACTG-AGCCTATC,52696549,51467882,1228667,0,0.0130,0.9767,0.0233,0.0000
7,tih_rna_sample_00118_23H5VFLT4_s38,GTCATCGA-GATCCACT,85423224,83964430,1458794,0,0.0211,0.9829,0.0171,0.0000
7,tih_rna_sample_00089_23H5VFLT4_s39,AGCACTTC-ACGTCCAA,98750174,96585368,2164806,0,0.0244,0.9781,0.0219,0.0000
7,tih_rna_sample_00414_23H5VFLT4_s40,GAAGGAAG-GACGTCAT,91949709,89925942,2023767,0,0.0227,0.9780,0.0220,0.0000
7,tih_rna_sample_00121_23H5VFLT4_s41,GTTGTTCG-CCAACTTC,77736799,76510952,1225847,0,0.0192,0.9842,0.0158,0.0000
7,tih_rna_sample_00122_23H5VFLT4_s42,CGGTTGTT-GTGGTATG,53462107,52454609,1007498,0,0.0132,0.9812,0.0188,0.0000
7,tih_rna_sample_00163_23H5VFLT4_s43,ACTGAGGT-GTCAACAG,101040029,99024758,2015271,0,0.0250,0.9801,0.0199,0.0000
7,tih_rna_sample_00419_23H5VFLT4_s44,TGAAGACG-ACATGCCA,110261933,107966467,2295466,0,0.0272,0.9792,0.0208,0.0000
7,tih_rna_sample_00420_23H5VFLT4_s45,GTTACGCA-ATGGCGAT,49897544,49042607,854937,0,0.0123,0.9829,0.0171,0.0000
7,tih_rna_sample_00425_23H5VFLT4_s46,AGCGTGTT-CTTCGCAA,58717385,57677590,1039795,0,0.0145,0.9823,0.0177,0.0000
7,tih_rna_sample_00422_23H5VFLT4_s47,GATCGAGT-GACGAACT,21488020,21127502,360518,0,0.0053,0.9832,0.0168,0.0000
7,tih_rna_sample_00426_23H5VFLT4_s48,ACAGCTCA-TACTGCTC,73754078,72707076,1047002,0,0.0182,0.9858,0.0142,0.0000
7,Undetermined,,250759187,250759187,0,0,0.0619,1.0000,0.0000,0.0000