Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
8,tih_rna_sample_00248_23H5VFLT4_s01,CTGATCGT-GCGCATAT,77933599,76297937,1635662,0,0.0192,0.9790,0.0210,0.0000
8,tih_rna_sample_00088_23H5VFLT4_s02,ACTCTCGA-CTGTACCA,103824193,102096645,1727548,0,0.0255,0.9834,0.0166,0.0000
8,tih_rna_sample_00251_23H5VFLT4_s03,TGAGCTAG-GAACGGTT,86173817,83752936,2420881,0,0.0212,0.9719,0.0281,0.0000
8,tih_rna_sample_00252_23H5VFLT4_s04,GAGACGAT-ACCGGTTA,78490322,76726407,1763915,0,0.0193,0.9775,0.0225,0.0000
8,tih_rna_sample_00254_23H5VFLT4_s05,CTTGTCGA-CGATGTTC,94749677,92928216,1821461,0,0.0233,0.9808,0.0192,0.0000
8,tih_rna_sample_00261_23H5VFLT4_s06,TTCCAAGG-CTACAAGG,73488961,72195803,1293158,0,0.0181,0.9824,0.0176,0.0000
8,tih_rna_sample_00235_23H5VFLT4_s07,CGCATGAT-AAGCCTGA,124137040,121563990,2573050,0,0.0305,0.9793,0.0207,0.0000
8,tih_rna_sample_00127_23H5VFLT4_s08,ACGGAACA-ACGAGAAC,58472752,57284180,1188572,0,0.0144,0.9797,0.0203,0.0000
8,tih_rna_sample_00272_23H5VFLT4_s09,CGGCTAAT-CTCGTTCT,90687948,89401996,1285952,0,0.0223,0.9858,0.0142,0.0000
8,tih_rna_sample_00218_23H5VFLT4_s10,ATCGATCG-TGGAAGCA,87753772,82315151,5438621,0,0.0216,0.9380,0.0620,0.0000
8,tih_rna_sample_00096_23H5VFLT4_s11,GCAAGATC-AGTCGAAG,77836829,76021502,1815327,0,0.0191,0.9767,0.0233,0.0000
8,tih_rna_sample_00097_23H5VFLT4_s12,GCTATCCT-AACAGGTG,92096023,90467335,1628688,0,0.0227,0.9823,0.0177,0.0000
8,V4_0001_RNA_0001_23H5VFLT4_s13,TACGCTAC-CGTGTGAT,95734395,93608067,2126328,0,0.0235,0.9778,0.0222,0.0000
8,tih_rna_sample_00274_23H5VFLT4_s14,TGGACTCT-TCTTACGG,50425075,49616012,809063,0,0.0124,0.9840,0.0160,0.0000
8,NTC_0001_0001_23H5VFLT4_s15,AGAGTAGC-AAGGCGTA,53221,52007,1214,0,0.0000,0.9772,0.0228,0.0000
8,tih_rna_sample_00220_23H5VFLT4_s16,ATCCAGAG-TAACGTCG,78510760,76728308,1782452,0,0.0193,0.9773,0.0227,0.0000
8,tih_rna_sample_00087_23H5VFLT4_s17,GACGATCT-TCGTGCAT,104016280,102012397,2003883,0,0.0256,0.9807,0.0193,0.0000
8,tih_rna_sample_00280_23H5VFLT4_s18,AACTGAGC-CAATCAGG,113444757,111590030,1854727,0,0.0279,0.9837,0.0163,0.0000
8,HD789_0002_RNA_0008_23H5VFLT4_s19,CTTAGGAC-ACTCCTAC,121406444,119044221,2362223,0,0.0299,0.9805,0.0195,0.0000
8,tih_rna_sample_00104_23H5VFLT4_s20,GTGCCATA-CTCCTAGT,53554858,52274970,1279888,0,0.0132,0.9761,0.0239,0.0000
8,tih_rna_sample_00105_23H5VFLT4_s21,GAATCCGA-AGCTAGTG,14310284,13992838,317446,0,0.0035,0.9778,0.0222,0.0000
8,tih_rna_sample_00388_23H5VFLT4_s22,TCGCTGTT-CAAGTCGT,138153466,135512506,2640960,0,0.0340,0.9809,0.0191,0.0000
8,tih_rna_sample_00377_23H5VFLT4_s23,TTCGTTGG-TACACACG,103077175,101039454,2037721,0,0.0254,0.9802,0.0198,0.0000
8,tih_rna_sample_00378_23H5VFLT4_s24,AAGCACTG-AGGTCAAC,44789536,43852003,937533,0,0.0110,0.9791,0.0209,0.0000
8,tih_rna_sample_00394_23H5VFLT4_s25,CCTTGATC-GATGGAGT,49409261,48503671,905590,0,0.0122,0.9817,0.0183,0.0000
8,tih_rna_sample_00396_23H5VFLT4_s26,GTCGAAGA-CCACATTG,105860544,103941681,1918863,0,0.0260,0.9819,0.0181,0.0000
8,tih_rna_sample_00400_23H5VFLT4_s27,ACCACGAT-GTCTGCAA,105171518,103141494,2030024,0,0.0259,0.9807,0.0193,0.0000
8,tih_rna_sample_00402_23H5VFLT4_s28,GATTACCG-TTGGACTG,99569314,97688811,1880503,0,0.0245,0.9811,0.0189,0.0000
8,tih_rna_sample_00403_23H5VFLT4_s29,GCACAACT-CTGAACGT,81544621,80081607,1463014,0,0.0201,0.9821,0.0179,0.0000
8,tih_rna_sample_00111_23H5VFLT4_s30,GCGTCATT-CAGACGTT,43350866,42382694,968172,0,0.0107,0.9777,0.0223,0.0000
8,tih_rna_sample_00124_23H5VFLT4_s31,ATCCGGTA-GACCGATA,87980407,86438222,1542185,0,0.0216,0.9825,0.0175,0.0000
8,tih_rna_sample_00090_23H5VFLT4_s32,CGTTGCAA-ATAGAGCG,89448803,87528602,1920201,0,0.0220,0.9785,0.0215,0.0000
8,tih_rna_sample_00407_23H5VFLT4_s33,GTGAAGTG-GAGCAATC,72624857,71048516,1576341,0,0.0179,0.9783,0.0217,0.0000
8,tih_rna_sample_00410_23H5VFLT4_s34,CATGGCTA-CACACATC,70956358,69898602,1057756,0,0.0175,0.9851,0.0149,0.0000
8,tih_rna_sample_00115_23H5VFLT4_s35,ATGCCTGT-AGATTGCG,64050564,62739528,1311036,0,0.0158,0.9795,0.0205,0.0000
8,tih_rna_sample_00116_23H5VFLT4_s36,CAACACCT-AGCTACCA,89786642,87514029,2272613,0,0.0221,0.9747,0.0253,0.0000
8,tih_rna_sample_00117_23H5VFLT4_s37,TGTGACTG-AGCCTATC,53247772,51898250,1349522,0,0.0131,0.9747,0.0253,0.0000
8,tih_rna_sample_00118_23H5VFLT4_s38,GTCATCGA-GATCCACT,84770880,83250999,1519881,0,0.0208,0.9821,0.0179,0.0000
8,tih_rna_sample_00089_23H5VFLT4_s39,AGCACTTC-ACGTCCAA,97943531,95677468,2266063,0,0.0241,0.9769,0.0231,0.0000
8,tih_rna_sample_00414_23H5VFLT4_s40,GAAGGAAG-GACGTCAT,90856344,88721575,2134769,0,0.0223,0.9765,0.0235,0.0000
8,tih_rna_sample_00121_23H5VFLT4_s41,GTTGTTCG-CCAACTTC,78240110,76926501,1313609,0,0.0192,0.9832,0.0168,0.0000
8,tih_rna_sample_00122_23H5VFLT4_s42,CGGTTGTT-GTGGTATG,54407325,53350962,1056363,0,0.0134,0.9806,0.0194,0.0000
8,tih_rna_sample_00163_23H5VFLT4_s43,ACTGAGGT-GTCAACAG,100806588,98622881,2183707,0,0.0248,0.9783,0.0217,0.0000
8,tih_rna_sample_00419_23H5VFLT4_s44,TGAAGACG-ACATGCCA,108945702,106548690,2397012,0,0.0268,0.9780,0.0220,0.0000
8,tih_rna_sample_00420_23H5VFLT4_s45,GTTACGCA-ATGGCGAT,49746142,48847569,898573,0,0.0122,0.9819,0.0181,0.0000
8,tih_rna_sample_00425_23H5VFLT4_s46,AGCGTGTT-CTTCGCAA,59869068,58738280,1130788,0,0.0147,0.9811,0.0189,0.0000
8,tih_rna_sample_00422_23H5VFLT4_s47,GATCGAGT-GACGAACT,22069556,21679116,390440,0,0.0054,0.9823,0.0177,0.0000
8,tih_rna_sample_00426_23H5VFLT4_s48,ACAGCTCA-TACTGCTC,73577918,72473970,1103948,0,0.0181,0.9850,0.0150,0.0000
8,Undetermined,,268476578,268476578,0,0,0.0660,1.0000,0.0000,0.0000