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Quality_Metrics.csv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001_exp0003/B23H5VFLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L008/Reports/Quality_Metrics.csv
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Workflow Run
dev_rna_exp0001_exp0003_73d51683
Published
Jun 07, 2026 11:33 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
8 tih_rna_sample_00248_23H5VFLT4_s01 CTGATCGT GCGCATAT 1 11767973449 11212051337 458878670840 38.99 0.95
8 tih_rna_sample_00248_23H5VFLT4_s01 CTGATCGT GCGCATAT 2 11767973449 10991177402 454548237092 38.63 0.93
8 tih_rna_sample_00088_23H5VFLT4_s02 ACTCTCGA CTGTACCA 1 15677453143 14894644716 610133404365 38.92 0.95
8 tih_rna_sample_00088_23H5VFLT4_s02 ACTCTCGA CTGTACCA 2 15677453143 14747201099 607753768373 38.77 0.94
8 tih_rna_sample_00251_23H5VFLT4_s03 TGAGCTAG GAACGGTT 1 13012246367 12414280388 507703574624 39.02 0.95
8 tih_rna_sample_00251_23H5VFLT4_s03 TGAGCTAG GAACGGTT 2 13012246367 12312051126 506000228142 38.89 0.95
8 tih_rna_sample_00252_23H5VFLT4_s04 GAGACGAT ACCGGTTA 1 11852038622 11354101832 463560304409 39.11 0.96
8 tih_rna_sample_00252_23H5VFLT4_s04 GAGACGAT ACCGGTTA 2 11852038622 11158226966 459633306254 38.78 0.94
8 tih_rna_sample_00254_23H5VFLT4_s05 CTTGTCGA CGATGTTC 1 14307201227 13429249512 552956936997 38.65 0.94
8 tih_rna_sample_00254_23H5VFLT4_s05 CTTGTCGA CGATGTTC 2 14307201227 13355447051 552402781082 38.61 0.93
8 tih_rna_sample_00261_23H5VFLT4_s06 TTCCAAGG CTACAAGG 1 11096833111 10540046065 431947232458 38.93 0.95
8 tih_rna_sample_00261_23H5VFLT4_s06 TTCCAAGG CTACAAGG 2 11096833111 10464107321 430721506160 38.81 0.94
8 tih_rna_sample_00235_23H5VFLT4_s07 CGCATGAT AAGCCTGA 1 18744693040 17961818297 733143805493 39.11 0.96
8 tih_rna_sample_00235_23H5VFLT4_s07 CGCATGAT AAGCCTGA 2 18744693040 17757265270 729271596643 38.91 0.95
8 tih_rna_sample_00127_23H5VFLT4_s08 ACGGAACA ACGAGAAC 1 8829385552 8247440233 340287897307 38.54 0.93
8 tih_rna_sample_00127_23H5VFLT4_s08 ACGGAACA ACGAGAAC 2 8829385552 8268430251 341563163694 38.68 0.94
8 tih_rna_sample_00272_23H5VFLT4_s09 CGGCTAAT CTCGTTCT 1 13693880148 13103976992 535135715645 39.08 0.96
8 tih_rna_sample_00272_23H5VFLT4_s09 CGGCTAAT CTCGTTCT 2 13693880148 12966379980 532715476179 38.90 0.95
8 tih_rna_sample_00218_23H5VFLT4_s10 ATCGATCG TGGAAGCA 1 13250819572 12668296542 517527361161 39.06 0.96
8 tih_rna_sample_00218_23H5VFLT4_s10 ATCGATCG TGGAAGCA 2 13250819572 12584532405 516357314529 38.97 0.95
8 tih_rna_sample_00096_23H5VFLT4_s11 GCAAGATC AGTCGAAG 1 11753361179 11237015572 459123109522 39.06 0.96
8 tih_rna_sample_00096_23H5VFLT4_s11 GCAAGATC AGTCGAAG 2 11753361179 11137785610 457419889957 38.92 0.95
8 tih_rna_sample_00097_23H5VFLT4_s12 GCTATCCT AACAGGTG 1 13906499473 13139490299 539590696676 38.80 0.94
8 tih_rna_sample_00097_23H5VFLT4_s12 GCTATCCT AACAGGTG 2 13906499473 13118062009 539988110755 38.83 0.94
8 V4_0001_RNA_0001_23H5VFLT4_s13 TACGCTAC CGTGTGAT 1 14455893645 13968284134 568274315821 39.31 0.97
8 V4_0001_RNA_0001_23H5VFLT4_s13 TACGCTAC CGTGTGAT 2 14455893645 13604017419 560067039879 38.74 0.94
8 tih_rna_sample_00274_23H5VFLT4_s14 TGGACTCT TCTTACGG 1 7614186325 7123616687 293785748384 38.58 0.94
8 tih_rna_sample_00274_23H5VFLT4_s14 TGGACTCT TCTTACGG 2 7614186325 7122199304 294307256204 38.65 0.94
8 NTC_0001_0001_23H5VFLT4_s15 AGAGTAGC AAGGCGTA 1 8036371 5227749 259218795 32.26 0.65
8 NTC_0001_0001_23H5VFLT4_s15 AGAGTAGC AAGGCGTA 2 8036371 6253665 286868040 35.70 0.78
8 tih_rna_sample_00220_23H5VFLT4_s16 ATCCAGAG TAACGTCG 1 11855124760 11321127109 462748875727 39.03 0.95
8 tih_rna_sample_00220_23H5VFLT4_s16 ATCCAGAG TAACGTCG 2 11855124760 11217012421 461057403043 38.89 0.95
8 tih_rna_sample_00087_23H5VFLT4_s17 GACGATCT TCGTGCAT 1 15706458280 15058469938 614558821327 39.13 0.96
8 tih_rna_sample_00087_23H5VFLT4_s17 GACGATCT TCGTGCAT 2 15706458280 14888957843 611454412649 38.93 0.95
8 tih_rna_sample_00280_23H5VFLT4_s18 AACTGAGC CAATCAGG 1 17130158307 16522172762 672697496822 39.27 0.96
8 tih_rna_sample_00280_23H5VFLT4_s18 AACTGAGC CAATCAGG 2 17130158307 16270937227 667506416167 38.97 0.95
8 HD789_0002_RNA_0008_23H5VFLT4_s19 CTTAGGAC ACTCCTAC 1 18332373044 17755057978 721630868053 39.36 0.97
8 HD789_0002_RNA_0008_23H5VFLT4_s19 CTTAGGAC ACTCCTAC 2 18332373044 17451036222 715135690998 39.01 0.95
8 tih_rna_sample_00104_23H5VFLT4_s20 GTGCCATA CTCCTAGT 1 8086783558 7496235181 310336981201 38.38 0.93
8 tih_rna_sample_00104_23H5VFLT4_s20 GTGCCATA CTCCTAGT 2 8086783558 7485014116 310826892670 38.44 0.93
8 tih_rna_sample_00105_23H5VFLT4_s21 GAATCCGA AGCTAGTG 1 2160852884 1932009926 81366020399 37.65 0.89
8 tih_rna_sample_00105_23H5VFLT4_s21 GAATCCGA AGCTAGTG 2 2160852884 1956772327 82175741059 38.03 0.91
8 tih_rna_sample_00388_23H5VFLT4_s22 TCGCTGTT CAAGTCGT 1 20861173366 20124210934 819007988671 39.26 0.96
8 tih_rna_sample_00388_23H5VFLT4_s22 TCGCTGTT CAAGTCGT 2 20861173366 19821524373 812996807436 38.97 0.95
8 tih_rna_sample_00377_23H5VFLT4_s23 TTCGTTGG TACACACG 1 15564653425 14844355361 607236201386 39.01 0.95
8 tih_rna_sample_00377_23H5VFLT4_s23 TTCGTTGG TACACACG 2 15564653425 14712437726 604922374184 38.87 0.95
8 tih_rna_sample_00378_23H5VFLT4_s24 AAGCACTG AGGTCAAC 1 6763219936 6299518918 260280725683 38.48 0.93
8 tih_rna_sample_00378_23H5VFLT4_s24 AAGCACTG AGGTCAAC 2 6763219936 6320810425 261364433089 38.64 0.93
8 tih_rna_sample_00394_23H5VFLT4_s25 CCTTGATC GATGGAGT 1 7460798411 7017372413 288667224350 38.69 0.94
8 tih_rna_sample_00394_23H5VFLT4_s25 CCTTGATC GATGGAGT 2 7460798411 6969340311 288164727660 38.62 0.93
8 tih_rna_sample_00396_23H5VFLT4_s26 GTCGAAGA CCACATTG 1 15984942144 15366788557 626281033840 39.18 0.96
8 tih_rna_sample_00396_23H5VFLT4_s26 GTCGAAGA CCACATTG 2 15984942144 15209171403 623443934469 39.00 0.95
8 tih_rna_sample_00400_23H5VFLT4_s27 ACCACGAT GTCTGCAA 1 15880899218 15053675095 617322990703 38.87 0.95
8 tih_rna_sample_00400_23H5VFLT4_s27 ACCACGAT GTCTGCAA 2 15880899218 14925137257 615312514249 38.75 0.94
8 tih_rna_sample_00402_23H5VFLT4_s28 GATTACCG TTGGACTG 1 15034966414 14332094689 586495689586 39.01 0.95
8 tih_rna_sample_00402_23H5VFLT4_s28 GATTACCG TTGGACTG 2 15034966414 14225879208 584779531869 38.89 0.95
8 tih_rna_sample_00403_23H5VFLT4_s29 GCACAACT CTGAACGT 1 12313237771 11669311823 478521441245 38.86 0.95
8 tih_rna_sample_00403_23H5VFLT4_s29 GCACAACT CTGAACGT 2 12313237771 11612381940 478044072837 38.82 0.94
8 tih_rna_sample_00111_23H5VFLT4_s30 GCGTCATT CAGACGTT 1 6545980766 6181373398 253858868818 38.78 0.94
8 tih_rna_sample_00111_23H5VFLT4_s30 GCGTCATT CAGACGTT 2 6545980766 6121215287 252918337532 38.64 0.94
8 tih_rna_sample_00124_23H5VFLT4_s31 ATCCGGTA GACCGATA 1 13285041457 12687063696 518606088477 39.04 0.95
8 tih_rna_sample_00124_23H5VFLT4_s31 ATCCGGTA GACCGATA 2 13285041457 12570201424 516656981002 38.89 0.95
8 tih_rna_sample_00090_23H5VFLT4_s32 CGTTGCAA ATAGAGCG 1 13506769253 12681318014 522132028355 38.66 0.94
8 tih_rna_sample_00090_23H5VFLT4_s32 CGTTGCAA ATAGAGCG 2 13506769253 12567112417 520618127917 38.54 0.93
8 tih_rna_sample_00407_23H5VFLT4_s33 GTGAAGTG GAGCAATC 1 10966353407 10456217671 427738340998 39.00 0.95
8 tih_rna_sample_00407_23H5VFLT4_s33 GTGAAGTG GAGCAATC 2 10966353407 10313206727 424927623002 38.75 0.94
8 tih_rna_sample_00410_23H5VFLT4_s34 CATGGCTA CACACATC 1 10714410058 10127863324 415800918286 38.81 0.95
8 tih_rna_sample_00410_23H5VFLT4_s34 CATGGCTA CACACATC 2 10714410058 10066820686 415108997359 38.74 0.94
8 tih_rna_sample_00115_23H5VFLT4_s35 ATGCCTGT AGATTGCG 1 9671635164 9076088786 374282980223 38.70 0.94
8 tih_rna_sample_00115_23H5VFLT4_s35 ATGCCTGT AGATTGCG 2 9671635164 8841812644 369376595341 38.19 0.91
8 tih_rna_sample_00116_23H5VFLT4_s36 CAACACCT AGCTACCA 1 13557782942 12707071495 523553781643 38.62 0.94
8 tih_rna_sample_00116_23H5VFLT4_s36 CAACACCT AGCTACCA 2 13557782942 12616049571 522576960540 38.54 0.93
8 tih_rna_sample_00117_23H5VFLT4_s37 TGTGACTG AGCCTATC 1 8040413572 7612645719 312322069350 38.84 0.95
8 tih_rna_sample_00117_23H5VFLT4_s37 TGTGACTG AGCCTATC 2 8040413572 7501589236 310254919810 38.59 0.93
8 tih_rna_sample_00118_23H5VFLT4_s38 GTCATCGA GATCCACT 1 12800402880 12221488815 499536368730 39.03 0.95
8 tih_rna_sample_00118_23H5VFLT4_s38 GTCATCGA GATCCACT 2 12800402880 12107037146 497691002141 38.88 0.95
8 tih_rna_sample_00089_23H5VFLT4_s39 AGCACTTC ACGTCCAA 1 14789473181 14178996224 578623593122 39.12 0.96
8 tih_rna_sample_00089_23H5VFLT4_s39 AGCACTTC ACGTCCAA 2 14789473181 14014439415 575538170457 38.92 0.95
8 tih_rna_sample_00414_23H5VFLT4_s40 GAAGGAAG GACGTCAT 1 13719307944 13152587458 536829750931 39.13 0.96
8 tih_rna_sample_00414_23H5VFLT4_s40 GAAGGAAG GACGTCAT 2 13719307944 12937027553 532625890946 38.82 0.94
8 tih_rna_sample_00121_23H5VFLT4_s41 GTTGTTCG CCAACTTC 1 11814256610 11131599402 457512719070 38.73 0.94
8 tih_rna_sample_00121_23H5VFLT4_s41 GTTGTTCG CCAACTTC 2 11814256610 11074998024 457179470712 38.70 0.94
8 tih_rna_sample_00122_23H5VFLT4_s42 CGGTTGTT GTGGTATG 1 8215506075 7634360166 315654059784 38.42 0.93
8 tih_rna_sample_00122_23H5VFLT4_s42 CGGTTGTT GTGGTATG 2 8215506075 7651345794 316867155387 38.57 0.93
8 tih_rna_sample_00163_23H5VFLT4_s43 ACTGAGGT GTCAACAG 1 15221794788 14548568410 594564191317 39.06 0.96
8 tih_rna_sample_00163_23H5VFLT4_s43 ACTGAGGT GTCAACAG 2 15221794788 14399145961 591827808328 38.88 0.95
8 tih_rna_sample_00419_23H5VFLT4_s44 TGAAGACG ACATGCCA 1 16450801002 15729816412 642597745510 39.06 0.96
8 tih_rna_sample_00419_23H5VFLT4_s44 TGAAGACG ACATGCCA 2 16450801002 15550466144 639397159223 38.87 0.95
8 tih_rna_sample_00420_23H5VFLT4_s45 GTTACGCA ATGGCGAT 1 7511667442 7131164905 292264436941 38.91 0.95
8 tih_rna_sample_00420_23H5VFLT4_s45 GTTACGCA ATGGCGAT 2 7511667442 7046413839 290742176199 38.71 0.94
8 tih_rna_sample_00425_23H5VFLT4_s46 AGCGTGTT CTTCGCAA 1 9040229268 8457703702 348768652192 38.58 0.94
8 tih_rna_sample_00425_23H5VFLT4_s46 AGCGTGTT CTTCGCAA 2 9040229268 8435394948 348939247941 38.60 0.93
8 tih_rna_sample_00422_23H5VFLT4_s47 GATCGAGT GACGAACT 1 3332502956 3049160449 127056006403 38.13 0.91
8 tih_rna_sample_00422_23H5VFLT4_s47 GATCGAGT GACGAACT 2 3332502956 3053588432 127491493232 38.26 0.92
8 tih_rna_sample_00426_23H5VFLT4_s48 ACAGCTCA TACTGCTC 1 11110265618 10574053248 432847721322 38.96 0.95
8 tih_rna_sample_00426_23H5VFLT4_s48 ACAGCTCA TACTGCTC 2 11110265618 10389879102 429170765679 38.63 0.94
8 Undetermined 1 40539963278 35354979587 1505689485179 37.14 0.87
8 Undetermined 2 40539963278 34445999308 1481377271935 36.54 0.85
99 rows