File Info

Filename
Adapter_Metrics.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001_exp0003/B23H5VFLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L002/Reports/Adapter_Metrics.csv
Size
7.0 KB
Workflow Run
dev_rna_exp0001_exp0003_73d51683
Published
Jun 07, 2026 11:35 PM

Content

View in new tab
Lane Sample_ID index index2 ReadNumber AdapterBases SampleBases % Adapter Bases
2 V4_0001_RNA_0005_23H5VFLT4_s01 GAGCAGTA TGAGCTGT 1 0 14614117032 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s01 GAGCAGTA TGAGCTGT 2 0 14614117032 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s02 AGTTCGTC ACTCGATC 1 0 12965105375 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s02 AGTTCGTC ACTCGATC 2 0 12965105375 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s03 TTGCGAAG AACACGCT 1 0 13862819854 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s03 TTGCGAAG AACACGCT 2 0 13862819854 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s04 ATCGCCAT TGCGTAAC 1 0 11769064575 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s04 ATCGCCAT TGCGTAAC 2 0 11769064575 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s05 TGGCATGT CGTCTTCA 1 0 11488995513 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s05 TGGCATGT CGTCTTCA 2 0 11488995513 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s06 CTGTTGAC ACCTCAGT 1 0 11835110465 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s06 CTGTTGAC ACCTCAGT 2 0 11835110465 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s07 CATACCAC AACAACCG 1 0 9865924448 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s07 CATACCAC AACAACCG 2 0 9865924448 0.000
2 GM24385_0001_RNA_0001_23H5VFLT4_s08 GAAGTTGG CGAACAAC 1 0 10994478365 0.000
2 GM24385_0001_RNA_0001_23H5VFLT4_s08 GAAGTTGG CGAACAAC 2 0 10994478365 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s09 ATGACGTC CTTCCTTC 1 0 13454114345 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s09 ATGACGTC CTTCCTTC 2 0 13454114345 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s10 TTGGACGT GAAGTGCT 1 0 13447933160 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s10 TTGGACGT GAAGTGCT 2 0 13447933160 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s11 AGTGGATC TCGATGAC 1 0 10828570588 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s11 AGTGGATC TCGATGAC 2 0 10828570588 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s12 GATAGGCT CAGTCACA 1 0 14594458946 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s12 GATAGGCT CAGTCACA 2 0 14594458946 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s13 TGGTAGCT AGGTGTTG 1 0 12730488521 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s13 TGGTAGCT AGGTGTTG 2 0 12730488521 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s14 CGCAATCT ACAGGCAT 1 0 11759400273 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s14 CGCAATCT ACAGGCAT 2 0 11759400273 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s15 GATGTGTG TAGCCATG 1 0 10695828300 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s15 GATGTGTG TAGCCATG 2 0 10695828300 0.000
2 GM24385_0001_RNA_0001_23H5VFLT4_s16 GATTGCTC CACTTCAC 1 0 11195092737 0.000
2 GM24385_0001_RNA_0001_23H5VFLT4_s16 GATTGCTC CACTTCAC 2 0 11195092737 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s17 CGCTCTAT TTGCAACG 1 0 16599818825 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s17 CGCTCTAT TTGCAACG 2 0 16599818825 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s18 TATCGGTC TACCGGAT 1 0 13172538605 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s18 TATCGGTC TACCGGAT 2 0 13172538605 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s19 AACGTCTG AATGACGC 1 0 13267674343 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s19 AACGTCTG AATGACGC 2 0 13267674343 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s20 ACGTTCAG AGTTGTGC 1 0 12092742739 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s20 ACGTTCAG AGTTGTGC 2 0 12092742739 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s21 CAGTCCAA CGGTAATC 1 0 11213391370 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s21 CAGTCCAA CGGTAATC 2 0 11213391370 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s22 TTGCAGAC ATCGTGGT 1 0 9789798553 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s22 TTGCAGAC ATCGTGGT 2 0 9789798553 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s23 CAATGTGG TCTTCGAC 1 0 11008343336 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s23 CAATGTGG TCTTCGAC 2 0 11008343336 0.000
2 GM24385_0001_RNA_0001_23H5VFLT4_s24 ACTCCATC GATCAAGG 1 0 8899076129 0.000
2 GM24385_0001_RNA_0001_23H5VFLT4_s24 ACTCCATC GATCAAGG 2 0 8899076129 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s25 GTTGACCT CAGTGCTT 1 0 16325133064 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s25 GTTGACCT CAGTGCTT 2 0 16325133064 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s26 CGTGTGTA CCAACGAA 1 0 15372963153 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s26 CGTGTGTA CCAACGAA 2 0 15372963153 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s27 ACGACTTG AACAGCGA 1 0 13167162250 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s27 ACGACTTG AACAGCGA 2 0 13167162250 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s28 CACTAGCT TCGGATTC 1 0 9083382199 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s28 CACTAGCT TCGGATTC 2 0 9083382199 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s29 ACTAGGAG TATGGCAC 1 0 12078077921 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s29 ACTAGGAG TATGGCAC 2 0 12078077921 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s30 GTAGGAGT GTCCTAAG 1 0 9394203619 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s30 GTAGGAGT GTCCTAAG 2 0 9394203619 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s31 CCTGATTG GCTCAGTT 1 0 11515710282 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s31 CCTGATTG GCTCAGTT 2 0 11515710282 0.000
2 GM24385_0001_RNA_0001_23H5VFLT4_s32 ATGCACGA AGATCGTC 1 0 8856212514 0.000
2 GM24385_0001_RNA_0001_23H5VFLT4_s32 ATGCACGA AGATCGTC 2 0 8856212514 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s33 CGACGTTA CTCTGGAT 1 0 13687292773 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s33 CGACGTTA CTCTGGAT 2 0 13687292773 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s34 TACGCCTT GCTACTCT 1 0 13085624515 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s34 TACGCCTT GCTACTCT 2 0 13085624515 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s35 CCGTAAGA AGAGTCCA 1 0 8936658972 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s35 CCGTAAGA AGAGTCCA 2 0 8936658972 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s36 ATCACACG GTAGCGTA 1 0 10717387778 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s36 ATCACACG GTAGCGTA 2 0 10717387778 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s37 CACCTGTT AGGATAGC 1 0 10514361030 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s37 CACCTGTT AGGATAGC 2 0 10514361030 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s38 CTTCGACT GATCTTGC 1 0 10290085260 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s38 CTTCGACT GATCTTGC 2 0 10290085260 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s39 TGCTTCCA CGATCGAT 1 0 9575864320 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s39 TGCTTCCA CGATCGAT 2 0 9575864320 0.000
2 GM24385_0001_RNA_0001_23H5VFLT4_s40 AGAACGAG ATTAGCCG 1 0 9859326805 0.000
2 GM24385_0001_RNA_0001_23H5VFLT4_s40 AGAACGAG ATTAGCCG 2 0 9859326805 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s41 GTTCTCGT TGTTCCGT 1 0 16133986241 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s41 GTTCTCGT TGTTCCGT 2 0 16133986241 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s42 TCAGGCTT ATCATGCG 1 0 13770643867 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s42 TCAGGCTT ATCATGCG 2 0 13770643867 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s43 CCTTGTAG CCTTGGAA 1 0 13348601585 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s43 CCTTGTAG CCTTGGAA 2 0 13348601585 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s44 GAACATCG TCGACAAG 1 0 10466538424 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s44 GAACATCG TCGACAAG 2 0 10466538424 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s45 TAACCGGT ATCGTCTC 1 0 10926253696 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s45 TAACCGGT ATCGTCTC 2 0 10926253696 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s46 AACCGTTC CTAGCTCA 1 0 9152403091 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s46 AACCGTTC CTAGCTCA 2 0 9152403091 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s47 TGGTACAG TCGAGAGT 1 0 11429690414 0.000
2 V4_0001_RNA_0005_23H5VFLT4_s47 TGGTACAG TCGAGAGT 2 0 11429690414 0.000
2 GM24385_0001_RNA_0001_23H5VFLT4_s48 ATATGCGC ACGATCAG 1 0 8272267579 0.000
2 GM24385_0001_RNA_0001_23H5VFLT4_s48 ATATGCGC ACGATCAG 2 0 8272267579 0.000
2 Undetermined 1 0 34183477999 0.000
2 Undetermined 2 0 34183477999 0.000
99 rows