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Filename
Quality_Metrics.csv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001_exp0003/B23H5VFLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L004/Reports/Quality_Metrics.csv
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Workflow Run
dev_rna_exp0001_exp0003_73d51683
Published
Jun 07, 2026 11:39 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
4 V4_0001_RNA_0005_23H5VFLT4_s01 GAGCAGTA TGAGCTGT 1 14715964871 14139145147 576275644660 39.16 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s01 GAGCAGTA TGAGCTGT 2 14715964871 13961461423 572812103140 38.92 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s02 AGTTCGTC ACTCGATC 1 13009308360 12475395247 508861922299 39.12 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s02 AGTTCGTC ACTCGATC 2 13009308360 12329236082 506112642623 38.90 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s03 TTGCGAAG AACACGCT 1 13998465872 13497138527 549601551581 39.26 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s03 TTGCGAAG AACACGCT 2 13998465872 13264983092 544541027738 38.90 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s04 ATCGCCAT TGCGTAAC 1 11743051050 11306887700 460665950384 39.23 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s04 ATCGCCAT TGCGTAAC 2 11743051050 11080135390 455713731691 38.81 0.94
4 V4_0001_RNA_0005_23H5VFLT4_s05 TGGCATGT CGTCTTCA 1 11356212606 10901337493 444799676299 39.17 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s05 TGGCATGT CGTCTTCA 2 11356212606 10701856523 440463623261 38.79 0.94
4 V4_0001_RNA_0005_23H5VFLT4_s06 CTGTTGAC ACCTCAGT 1 11798720069 11307524169 461632527126 39.13 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s06 CTGTTGAC ACCTCAGT 2 11798720069 11127655139 457773618629 38.80 0.94
4 V4_0001_RNA_0005_23H5VFLT4_s07 CATACCAC AACAACCG 1 9829825784 9361120565 383083240307 38.97 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s07 CATACCAC AACAACCG 2 9829825784 9221750424 380246609511 38.68 0.94
4 GM24385_0001_RNA_0001_23H5VFLT4_s08 GAAGTTGG CGAACAAC 1 10999512101 10454760966 428027160867 38.91 0.95
4 GM24385_0001_RNA_0001_23H5VFLT4_s08 GAAGTTGG CGAACAAC 2 10999512101 10363888804 426507063295 38.78 0.94
4 V4_0001_RNA_0005_23H5VFLT4_s09 ATGACGTC CTTCCTTC 1 13666128764 13185897194 536395909940 39.25 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s09 ATGACGTC CTTCCTTC 2 13666128764 13015424139 533067942099 39.01 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s10 TTGGACGT GAAGTGCT 1 13485897127 13072082887 531030804880 39.38 0.97
4 V4_0001_RNA_0005_23H5VFLT4_s10 TTGGACGT GAAGTGCT 2 13485897127 12831725528 525725671994 38.98 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s11 AGTGGATC TCGATGAC 1 10926068268 10546106111 429051864710 39.27 0.97
4 V4_0001_RNA_0005_23H5VFLT4_s11 AGTGGATC TCGATGAC 2 10926068268 10403052422 426071973290 39.00 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s12 GATAGGCT CAGTCACA 1 14450759041 13862884689 565515782904 39.13 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s12 GATAGGCT CAGTCACA 2 14450759041 13676538459 561754789209 38.87 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s13 TGGTAGCT AGGTGTTG 1 12773574408 12270360504 500168394642 39.16 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s13 TGGTAGCT AGGTGTTG 2 12773574408 12093402543 496588365711 38.88 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s14 CGCAATCT ACAGGCAT 1 11716574257 11250057911 458694178124 39.15 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s14 CGCAATCT ACAGGCAT 2 11716574257 11080710054 455247670824 38.86 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s15 GATGTGTG TAGCCATG 1 10681117880 10225322665 417349553143 39.07 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s15 GATGTGTG TAGCCATG 2 10681117880 10091389396 414751379551 38.83 0.94
4 GM24385_0001_RNA_0001_23H5VFLT4_s16 GATTGCTC CACTTCAC 1 11085464321 10580475318 432506083881 39.02 0.95
4 GM24385_0001_RNA_0001_23H5VFLT4_s16 GATTGCTC CACTTCAC 2 11085464321 10449744578 430007552477 38.79 0.94
4 V4_0001_RNA_0005_23H5VFLT4_s17 CGCTCTAT TTGCAACG 1 16867248885 16369397882 664696957151 39.41 0.97
4 V4_0001_RNA_0005_23H5VFLT4_s17 CGCTCTAT TTGCAACG 2 16867248885 16063919400 657892326024 39.00 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s18 TATCGGTC TACCGGAT 1 13341385597 12833095351 522822539980 39.19 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s18 TATCGGTC TACCGGAT 2 13341385597 12644691054 518987536242 38.90 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s19 AACGTCTG AATGACGC 1 13439626801 12921893398 526450204258 39.17 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s19 AACGTCTG AATGACGC 2 13439626801 12740305574 522923537240 38.91 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s20 ACGTTCAG AGTTGTGC 1 12130429017 11620528908 474218115879 39.09 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s20 ACGTTCAG AGTTGTGC 2 12130429017 11469746351 471354993521 38.86 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s21 CAGTCCAA CGGTAATC 1 11305594990 10793638178 441086239379 39.01 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s21 CAGTCCAA CGGTAATC 2 11305594990 10681814362 439037122396 38.83 0.94
4 V4_0001_RNA_0005_23H5VFLT4_s22 TTGCAGAC ATCGTGGT 1 9892693728 9495818849 387298083035 39.15 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s22 TTGCAGAC ATCGTGGT 2 9892693728 9282595008 382673317368 38.68 0.94
4 V4_0001_RNA_0005_23H5VFLT4_s23 CAATGTGG TCTTCGAC 1 11051272334 10556205744 431317535433 39.03 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s23 CAATGTGG TCTTCGAC 2 11051272334 10450720438 429367857559 38.85 0.95
4 GM24385_0001_RNA_0001_23H5VFLT4_s24 ACTCCATC GATCAAGG 1 8935525415 8493710072 347653706741 38.91 0.95
4 GM24385_0001_RNA_0001_23H5VFLT4_s24 ACTCCATC GATCAAGG 2 8935525415 8424530702 346621173296 38.79 0.94
4 V4_0001_RNA_0005_23H5VFLT4_s25 GTTGACCT CAGTGCTT 1 16418202518 15826911431 644281232123 39.24 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s25 GTTGACCT CAGTGCTT 2 16418202518 15596052004 639492132130 38.95 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s26 CGTGTGTA CCAACGAA 1 15519324584 14889317428 607153851193 39.12 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s26 CGTGTGTA CCAACGAA 2 15519324584 14691506399 603271489988 38.87 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s27 ACGACTTG AACAGCGA 1 13306984022 12792097357 521192804167 39.17 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s27 ACGACTTG AACAGCGA 2 13306984022 12604240689 517454993220 38.89 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s28 CACTAGCT TCGGATTC 1 9122852542 8734705047 356578611102 39.09 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s28 CACTAGCT TCGGATTC 2 9122852542 8625940673 354469104317 38.86 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s29 ACTAGGAG TATGGCAC 1 12074342936 11567305807 472250557906 39.11 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s29 ACTAGGAG TATGGCAC 2 12074342936 11417881608 469189929096 38.86 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s30 GTAGGAGT GTCCTAAG 1 9325205981 8914354572 364315233135 39.07 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s30 GTAGGAGT GTCCTAAG 2 9325205981 8809938584 362161239290 38.84 0.94
4 V4_0001_RNA_0005_23H5VFLT4_s31 CCTGATTG GCTCAGTT 1 11503851346 11002733418 449308238037 39.06 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s31 CCTGATTG GCTCAGTT 2 11503851346 10866697123 446733276130 38.83 0.94
4 GM24385_0001_RNA_0001_23H5VFLT4_s32 ATGCACGA AGATCGTC 1 8900855815 8430920146 345691267045 38.84 0.95
4 GM24385_0001_RNA_0001_23H5VFLT4_s32 ATGCACGA AGATCGTC 2 8900855815 8294615537 343170260894 38.55 0.93
4 V4_0001_RNA_0005_23H5VFLT4_s33 CGACGTTA CTCTGGAT 1 13818876589 13275643128 541088467728 39.16 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s33 CGACGTTA CTCTGGAT 2 13818876589 13137182891 538494141758 38.97 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s34 TACGCCTT GCTACTCT 1 13067768765 12537635293 511357674712 39.13 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s34 TACGCCTT GCTACTCT 2 13067768765 12371497769 508060229657 38.88 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s35 CCGTAAGA AGAGTCCA 1 9015752319 8636271951 352403723727 39.09 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s35 CCGTAAGA AGAGTCCA 2 9015752319 8364760600 346044067324 38.38 0.93
4 V4_0001_RNA_0005_23H5VFLT4_s36 ATCACACG GTAGCGTA 1 10825944094 10334556837 422325784746 39.01 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s36 ATCACACG GTAGCGTA 2 10825944094 10052890789 415834166788 38.41 0.93
4 V4_0001_RNA_0005_23H5VFLT4_s37 CACCTGTT AGGATAGC 1 10545496475 10064901790 411328851385 39.01 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s37 CACCTGTT AGGATAGC 2 10545496475 9876620456 407590617119 38.65 0.94
4 V4_0001_RNA_0005_23H5VFLT4_s38 CTTCGACT GATCTTGC 1 10240828607 9750237756 398997276657 38.96 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s38 CTTCGACT GATCTTGC 2 10240828607 9629033092 396737678113 38.74 0.94
4 V4_0001_RNA_0005_23H5VFLT4_s39 TGCTTCCA CGATCGAT 1 9498931632 9034066634 369793457552 38.93 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s39 TGCTTCCA CGATCGAT 2 9498931632 8937173937 368067596775 38.75 0.94
4 GM24385_0001_RNA_0001_23H5VFLT4_s40 AGAACGAG ATTAGCCG 1 9766859690 9223003019 378670851311 38.77 0.94
4 GM24385_0001_RNA_0001_23H5VFLT4_s40 AGAACGAG ATTAGCCG 2 9766859690 9150443311 377648164747 38.67 0.94
4 V4_0001_RNA_0005_23H5VFLT4_s41 GTTCTCGT TGTTCCGT 1 16184475054 15595618410 635172725676 39.25 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s41 GTTCTCGT TGTTCCGT 2 16184475054 15343470906 629782061451 38.91 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s42 TCAGGCTT ATCATGCG 1 13957847325 13428555561 547063301445 39.19 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s42 TCAGGCTT ATCATGCG 2 13957847325 13199930732 542332261019 38.86 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s43 CCTTGTAG CCTTGGAA 1 13461067140 12882034038 525918699900 39.07 0.96
4 V4_0001_RNA_0005_23H5VFLT4_s43 CCTTGTAG CCTTGGAA 2 13461067140 12740293714 523235030485 38.87 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s44 GAACATCG TCGACAAG 1 10533250224 10004974444 409784768479 38.90 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s44 GAACATCG TCGACAAG 2 10533250224 9920437474 408399509092 38.77 0.94
4 V4_0001_RNA_0005_23H5VFLT4_s45 TAACCGGT ATCGTCTC 1 10788749925 10283699851 420777787168 39.00 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s45 TAACCGGT ATCGTCTC 2 10788749925 10095528082 416902972264 38.64 0.94
4 V4_0001_RNA_0005_23H5VFLT4_s46 AACCGTTC CTAGCTCA 1 9050176997 8628305986 352884466264 38.99 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s46 AACCGTTC CTAGCTCA 2 9050176997 8514832043 350664905585 38.75 0.94
4 V4_0001_RNA_0005_23H5VFLT4_s47 TGGTACAG TCGAGAGT 1 11364476232 10765397513 441403702931 38.84 0.95
4 V4_0001_RNA_0005_23H5VFLT4_s47 TGGTACAG TCGAGAGT 2 11364476232 10670725681 439856470828 38.70 0.94
4 GM24385_0001_RNA_0001_23H5VFLT4_s48 ATATGCGC ACGATCAG 1 8257462935 7861629502 321864019210 38.98 0.95
4 GM24385_0001_RNA_0001_23H5VFLT4_s48 ATATGCGC ACGATCAG 2 8257462935 7751073929 319586923073 38.70 0.94
4 Undetermined 1 30974527924 26838145972 1147162708912 37.04 0.87
4 Undetermined 2 30974527924 26266931345 1130278642907 36.49 0.85
99 rows