File Info

Filename
Demultiplex_Stats.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001_exp0003/B23H5VFLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L004/Reports/Demultiplex_Stats.csv
Size
5.3 KB
Workflow Run
dev_rna_exp0001_exp0003_73d51683
Published
Jun 07, 2026 11:39 PM

Content

View in new tab
Lane SampleID Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
4 V4_0001_RNA_0005_23H5VFLT4_s01 GAGCAGTA-TGAGCTGT 97456721 95768607 1688114 0 0.0245 0.9827 0.0173 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s02 AGTTCGTC-ACTCGATC 86154360 84968994 1185366 0 0.0217 0.9862 0.0138 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s03 TTGCGAAG-AACACGCT 92705072 91303945 1401127 0 0.0233 0.9849 0.0151 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s04 ATCGCCAT-TGCGTAAC 77768550 76556999 1211551 0 0.0195 0.9844 0.0156 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s05 TGGCATGT-CGTCTTCA 75206706 74051382 1155324 0 0.0189 0.9846 0.0154 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s06 CTGTTGAC-ACCTCAGT 78137219 76897491 1239728 0 0.0196 0.9841 0.0159 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s07 CATACCAC-AACAACCG 65098184 63853633 1244551 0 0.0164 0.9809 0.0191 0.0000
4 GM24385_0001_RNA_0001_23H5VFLT4_s08 GAAGTTGG-CGAACAAC 72844451 71528548 1315903 0 0.0183 0.9819 0.0181 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s09 ATGACGTC-CTTCCTTC 90504164 89234305 1269859 0 0.0227 0.9860 0.0140 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s10 TTGGACGT-GAAGTGCT 89310577 87887801 1422776 0 0.0224 0.9841 0.0159 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s11 AGTGGATC-TCGATGAC 72358068 71338996 1019072 0 0.0182 0.9859 0.0141 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s12 GATAGGCT-CAGTCACA 95700391 94280304 1420087 0 0.0241 0.9852 0.0148 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s13 TGGTAGCT-AGGTGTTG 84593208 83161364 1431844 0 0.0213 0.9831 0.0169 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s14 CGCAATCT-ACAGGCAT 77593207 76194978 1398229 0 0.0195 0.9820 0.0180 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s15 GATGTGTG-TAGCCATG 70735880 69475974 1259906 0 0.0178 0.9822 0.0178 0.0000
4 GM24385_0001_RNA_0001_23H5VFLT4_s16 GATTGCTC-CACTTCAC 73413671 72215283 1198388 0 0.0185 0.9837 0.0163 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s17 CGCTCTAT-TTGCAACG 111703635 108644512 3059123 0 0.0281 0.9726 0.0274 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s18 TATCGGTC-TACCGGAT 88353547 87037564 1315983 0 0.0222 0.9851 0.0149 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s19 AACGTCTG-AATGACGC 89004151 87360920 1643231 0 0.0224 0.9815 0.0185 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s20 ACGTTCAG-AGTTGTGC 80333967 78961647 1372320 0 0.0202 0.9829 0.0171 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s21 CAGTCCAA-CGGTAATC 74871490 73433080 1438410 0 0.0188 0.9808 0.0192 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s22 TTGCAGAC-ATCGTGGT 65514528 64554783 959745 0 0.0165 0.9854 0.0146 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s23 CAATGTGG-TCTTCGAC 73187234 72080580 1106654 0 0.0184 0.9849 0.0151 0.0000
4 GM24385_0001_RNA_0001_23H5VFLT4_s24 ACTCCATC-GATCAAGG 59175665 58199940 975725 0 0.0149 0.9835 0.0165 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s25 GTTGACCT-CAGTGCTT 108729818 107091471 1638347 0 0.0273 0.9849 0.0151 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s26 CGTGTGTA-CCAACGAA 102776984 101346701 1430283 0 0.0258 0.9861 0.0139 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s27 ACGACTTG-AACAGCGA 88125722 86650162 1475560 0 0.0222 0.9833 0.0167 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s28 CACTAGCT-TCGGATTC 60416242 59502377 913865 0 0.0152 0.9849 0.0151 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s29 ACTAGGAG-TATGGCAC 79962536 78446199 1516337 0 0.0201 0.9810 0.0190 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s30 GTAGGAGT-GTCCTAAG 61756331 60732320 1024011 0 0.0155 0.9834 0.0166 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s31 CCTGATTG-GCTCAGTT 76184446 74575537 1608909 0 0.0191 0.9789 0.0211 0.0000
4 GM24385_0001_RNA_0001_23H5VFLT4_s32 ATGCACGA-AGATCGTC 58946065 57817159 1128906 0 0.0148 0.9808 0.0192 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s33 CGACGTTA-CTCTGGAT 91515739 89832014 1683725 0 0.0230 0.9816 0.0184 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s34 TACGCCTT-GCTACTCT 86541515 85055776 1485739 0 0.0218 0.9828 0.0172 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s35 CCGTAAGA-AGAGTCCA 59706969 58513936 1193033 0 0.0150 0.9800 0.0200 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s36 ATCACACG-GTAGCGTA 71694994 70041588 1653406 0 0.0180 0.9769 0.0231 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s37 CACCTGTT-AGGATAGC 69837725 68364622 1473103 0 0.0176 0.9789 0.0211 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s38 CTTCGACT-GATCTTGC 67820057 66724487 1095570 0 0.0170 0.9838 0.0162 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s39 TGCTTCCA-CGATCGAT 62906832 61723773 1183059 0 0.0158 0.9812 0.0188 0.0000
4 GM24385_0001_RNA_0001_23H5VFLT4_s40 AGAACGAG-ATTAGCCG 64681190 61122782 3558408 0 0.0163 0.9450 0.0550 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s41 GTTCTCGT-TGTTCCGT 107181954 105712342 1469612 0 0.0269 0.9863 0.0137 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s42 TCAGGCTT-ATCATGCG 92436075 90909069 1527006 0 0.0232 0.9835 0.0165 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s43 CCTTGTAG-CCTTGGAA 89146140 87761730 1384410 0 0.0224 0.9845 0.0155 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s44 GAACATCG-TCGACAAG 69756624 68252237 1504387 0 0.0175 0.9784 0.0216 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s45 TAACCGGT-ATCGTCTC 71448675 70050445 1398230 0 0.0180 0.9804 0.0196 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s46 AACCGTTC-CTAGCTCA 59934947 58892678 1042269 0 0.0151 0.9826 0.0174 0.0000
4 V4_0001_RNA_0005_23H5VFLT4_s47 TGGTACAG-TCGAGAGT 75261432 74034947 1226485 0 0.0189 0.9837 0.0163 0.0000
4 GM24385_0001_RNA_0001_23H5VFLT4_s48 ATATGCGC-ACGATCAG 54685185 53814770 870415 0 0.0137 0.9841 0.0159 0.0000
4 Undetermined 205129324 205129324 0 0 0.0516 1.0000 0.0000 0.0000
50 rows