FastQCFastQC Report
Mon 8 Jun 2026
NTC_0001_0001_23H5VFLT4_s15_2.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameNTC_0001_0001_23H5VFLT4_s15_2.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences206994
Total Bases31.2 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC93

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG16014477.36649371479366No Hit
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAAGGCGTAGTGTAGATC13270.6410813840014686Illumina Single End PCR Primer 1 (97% over 34bp)
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA11890.5744127849116399No Hit
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC9820.47440988627689695No Hit
GGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7290.35218412127887766No Hit
GGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6760.3265795143820594No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT5000.2415528952530025No Hit
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG3340.16135733402900565No Hit
GTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGTTCCAGATCGGAAGAG2540.12270887078852527No Hit
CTTCGCGCCCTCTCTCTCTCTCTCTCCCCCAGATCGGAAGAGCGTCGTGT2270.10966501444486315No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)