#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	LeftGene	LeftLocalBreakpoint	LeftBreakpoint	RightGene	RightLocalBreakpoint	RightBreakpoint	SpliceType	LargeAnchorSupport	NumCounterFusionLeft	NumCounterFusionRight	FAR_left	FAR_right	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	FFPM	microh_brkpt_dist	num_microh_near_brkpt
FGFR3--TACC3	1451	1	1451.00	1.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	27590	chr4:1739702:+	ONLY_REF_SPLICE	YES	32	1336	44.03	1.09	GT	1.8892	AG	1.7819	4.9525	627	0
TMPRSS2--ERG	954	0	954.00	0.00	TMPRSS2^ENSG00000184012.14	4652	chr21:41508081:-	ERG^ENSG00000157554.19	28751	chr21:38584945:-	ONLY_REF_SPLICE	YES	0	29	955.00	31.83	GT	1.6895	AG	1.9219	3.2539	1104	0
CCDC6--RET	329	0	329.00	0.00	CCDC6^ENSG00000108091.11	1435	chr10:59906122:-	RET^ENSG00000165731.20	31587	chr10:43116584:+	ONLY_REF_SPLICE	YES	970	79	0.34	4.12	GT	1.8892	AG	1.8323	1.1222	2092	0
TPM3--NTRK1	267	0	267.00	0.00	TPM3^ENSG00000143549.21	13389	chr1:154170400:-	NTRK1^ENSG00000198400.13	42070	chr1:156874571:+	ONLY_REF_SPLICE	YES	4892	7	0.05	33.50	GT	1.9329	AG	1.6895	0.9107	355	0
LMNA--NTRK1	264	1	264.00	1.00	LMNA^ENSG00000160789.23	17733	chr1:156130773:+	NTRK1^ENSG00000198400.13	40289	chr1:156874906:+	ONLY_REF_SPLICE	YES	1151	68	0.23	3.86	GT	1.7465	AG	1.5058	0.9039	947	0
FGFR3--BAIAP2L1	248	0	248.00	0.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	BAIAP2L1^ENSG00000006453.14	16927	chr7:98362432:-	ONLY_REF_SPLICE	YES	32	29	7.55	8.30	GT	1.8892	AG	1.8062	0.8459	1171	0
ETV6--NTRK3	204	0	204.00	0.00	ETV6^ENSG00000139083.11	11237	chr12:11869969:+	NTRK3^ENSG00000140538.16	46238	chr15:87940753:-	ONLY_REF_SPLICE	YES	1177	3	0.17	51.25	GT	1.7819	AG	1.9656	0.6958	1252	0
NCOA4--RET	196	1	196.00	1.00	NCOA4^ENSG00000266412.6	9075	chr10:46012883:-	RET^ENSG00000165731.20	30127	chr10:43116584:+	ONLY_REF_SPLICE	YES	963	80	0.21	2.44	GT	1.9086	AG	1.8323	0.6719	5144	0
KIF5B--RET	173	0	173.00	0.00	KIF5B^ENSG00000170759.11	19977	chr10:32017143:-	RET^ENSG00000165731.20	38832	chr10:43114480:+	ONLY_REF_SPLICE	YES	663	0	0.26	174.00	GT	1.9656	AG	1.9656	0.5901	3178	0
EML4--ALK	160	0	160.00	0.00	EML4^ENSG00000143924.19	17400	chr2:42295516:+	ALK^ENSG00000171094.18	59003	chr2:29223528:-	ONLY_REF_SPLICE	YES	265	17	0.61	8.94	GT	1.6895	AG	1.9086	0.5457	1550	0
SLC34A2--ROS1	132	1	132.00	1.00	SLC34A2^ENSG00000157765.13	6084	chr4:25664330:+	ROS1^ENSG00000047936.11	58025	chr6:117324415:-	ONLY_REF_SPLICE	YES	0	14	134.00	8.93	GT	1.8892	AG	1.7465	0.4536	999	0
CD74--ROS1	103	0	103.00	0.00	CD74^ENSG00000019582.16	4990	chr5:150404680:-	ROS1^ENSG00000047936.11	48731	chr6:117324415:-	ONLY_REF_SPLICE	YES	21268	14	0.00	6.93	GT	1.7819	AG	1.7465	0.3513	2407	0
CD74--ROS1	3	0	3.00	0.00	CD74^ENSG00000019582.16	4989	chr5:150404681:-	ROS1^ENSG00000047936.11	48779	chr6:117324367:-	INCL_NON_REF_SPLICE	YES	23743	33	0.00	0.12	GG	1.7819	TG	1.7465	0.0102	2384	0
SLC45A3--BRAF	81	0	81.00	0.00	SLC45A3^ENSG00000158715.6	1116	chr1:205680394:-	BRAF^ENSG00000157764.14	25172	chr7:140794467:-	ONLY_REF_SPLICE	YES	1	796	41.00	0.10	GT	1.5628	AG	1.7465	0.2763	2599	0
TFG--NTRK1	63	0	63.00	0.00	TFG^ENSG00000114354.15	9135	chr3:100732672:+	NTRK1^ENSG00000198400.13	37655	chr1:156874571:+	ONLY_REF_SPLICE	YES	517	7	0.12	8.00	GT	1.9329	AG	1.6895	0.2149	883	0
TLK2--AC240565.1	56	0	56.00	0.00	TLK2^ENSG00000146872.18	17137	chr17:62560126:+	AC240565.1^ENSG00000280136.2	41242	chr17:106864:-	ONLY_REF_SPLICE	YES	230	34	0.25	1.63	GT	1.8892	AG	1.8892	0.191	1734	0
PAX8--PPARG	40	0	40.00	0.00	PAX8^ENSG00000125618.18	9714	chr2:113235394:-	PPARG^ENSG00000132170.23	31404	chr3:12379704:+	ONLY_REF_SPLICE	YES	48	10	0.84	3.73	GT	1.8295	AG	1.9329	0.1364	1923	0
EGFR--SEPTIN14	35	0	35.00	0.00	EGFR^ENSG00000146648.19	30734	chr7:55200413:+	SEPTIN14^ENSG00000154997.9	54769	chr7:55796092:-	ONLY_REF_SPLICE	YES	1	17	18.00	2.00	GT	1.8892	AG	1.9899	0.1194	658	0
TVP23C--CDRT4	31	1	31.00	1.00	TVP23C^ENSG00000175106.17	14926	chr17:15503098:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	INCL_NON_REF_SPLICE	YES	90	4	0.36	6.60	GT	1.9329	AG	1.9899	0.1091	1215	0
TVP23C--CDRT4	27	0	27.00	0.00	TVP23C^ENSG00000175106.17	7982	chr17:15540433:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	205	4	0.14	5.60	GT	1.8323	AG	1.9899	0.0921	2126	0
TVP23C--CDRT4	23	0	23.00	0.00	TVP23C^ENSG00000175106.17	14926	chr17:15503098:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	INCL_NON_REF_SPLICE	YES	90	18	0.26	1.26	GT	1.9329	AG	1.6402	0.0784	137	0
TVP23C--CDRT4	7	0	7.00	0.00	TVP23C^ENSG00000175106.17	12676	chr17:15516419:-	CDRT4^ENSG00000239704.11	22624	chr17:15440285:-	ONLY_REF_SPLICE	YES	16	4	0.47	1.60	GT	1.8892	AG	1.9899	0.0239	1949	0
TVP23C--CDRT4	2	0	2.00	0.00	TVP23C^ENSG00000175106.17	7982	chr17:15540433:-	CDRT4^ENSG00000239704.11	23702	chr17:15438200:-	ONLY_REF_SPLICE	YES	205	18	0.01	0.16	GT	1.8323	AG	1.6402	0.0068	1363	0