File Info
- Filename
- V4_0001_RNA_0005_23H5VFLT4_s13.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001_exp0003/B23H5VFLT4/nfcore_rnafusion__73d51683--20260607-225254/fusioninspector/V4_0001_RNA_0005_23H5VFLT4_s13.FusionInspector.fusions.abridged.tsv
- Size
- 5.5 KB
- Workflow Run
- dev_rna_exp0001_exp0003_73d51683
- Published
- Jun 08, 2026 4:30 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 1235 | 1 | 1235.00 | 1.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 8 | 953 | 137.44 | 1.30 | GT | 1.8892 | AG | 1.7819 | 4.2037 | 627 | 0 |
| TMPRSS2--ERG | 729 | 0 | 729.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 0 | 16 | 730.00 | 42.94 | GT | 1.6895 | AG | 1.9219 | 2.4794 | 1104 | 0 |
| TPM3--NTRK1 | 279 | 0 | 279.00 | 0.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 3184 | 4 | 0.09 | 56.00 | GT | 1.9329 | AG | 1.6895 | 0.9489 | 355 | 0 |
| ETV6--NTRK3 | 263 | 0 | 263.00 | 0.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 987 | 3 | 0.27 | 66.00 | GT | 1.7819 | AG | 1.9656 | 0.8945 | 1252 | 0 |
| KIF5B--RET | 247 | 0 | 247.00 | 0.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 423 | 4 | 0.58 | 49.60 | GT | 1.9656 | AG | 1.9656 | 0.8401 | 3178 | 0 |
| CCDC6--RET | 199 | 0 | 199.00 | 0.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 764 | 35 | 0.26 | 5.56 | GT | 1.8892 | AG | 1.8323 | 0.6768 | 2092 | 0 |
| SLC34A2--ROS1 | 181 | 1 | 181.00 | 1.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 6 | 183.00 | 26.14 | GT | 1.8892 | AG | 1.7465 | 0.619 | 999 | 0 |
| SLC34A2--ROS1 | 5 | 0 | 5.00 | 0.00 | SLC34A2^ENSG00000157765.13 | 6088 | chr4:25664334:+ | ROS1^ENSG00000047936.11 | 58030 | chr6:117324410:- | INCL_NON_REF_SPLICE | YES | 0 | 8 | 6.00 | 0.67 | GA | 1.7465 | AT | 1.9086 | 0.017 | 1004 | 0 |
| FGFR3--BAIAP2L1 | 156 | 0 | 156.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 8 | 30 | 17.44 | 5.06 | GT | 1.8892 | AG | 1.8062 | 0.5306 | 1171 | 0 |
| NCOA4--RET | 150 | 0 | 150.00 | 0.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 825 | 35 | 0.18 | 4.19 | GT | 1.9086 | AG | 1.8323 | 0.5102 | 5144 | 0 |
| LMNA--NTRK1 | 142 | 0 | 142.00 | 0.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 973 | 40 | 0.15 | 3.49 | GT | 1.7465 | AG | 1.5058 | 0.483 | 947 | 0 |
| CD74--ROS1 | 134 | 0 | 134.00 | 0.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 14420 | 5 | 0.01 | 22.50 | GT | 1.7819 | AG | 1.7465 | 0.4557 | 2407 | 0 |
| STX16--NPEPL1 | 106 | 1 | 106.00 | 1.00 | STX16^ENSG00000124222.22 | 8855 | chr20:58673711:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 685 | 116 | 0.16 | 0.92 | GT | 1.7968 | AG | 1.8256 | 0.3639 | 1940 | 0 |
| STX16--NPEPL1 | 2 | 0 | 2.00 | 0.00 | STX16^ENSG00000124222.22 | 7774 | chr20:58671297:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 750 | 116 | 0.00 | 0.03 | GT | 1.8062 | AG | 1.8256 | 0.0068 | 2729 | 0 |
| STX16--NPEPL1 | 1 | 0 | 1.00 | 0.00 | STX16^ENSG00000124222.22 | 8855 | chr20:58673711:+ | NPEPL1^ENSG00000215440.12 | 19290 | chr20:58693737:+ | ONLY_REF_SPLICE | YES | 685 | 606 | 0.00 | 0.00 | GT | 1.7968 | AG | 1.7819 | 0.0034 | 1248 | 0 |
| STX16--NPEPL1 | 1 | 0 | 1.00 | 0.00 | STX16^ENSG00000124222.22 | 8855 | chr20:58673711:+ | NPEPL1^ENSG00000215440.12 | 21146 | chr20:58698684:+ | ONLY_REF_SPLICE | YES | 685 | 469 | 0.00 | 0.00 | GT | 1.7968 | AG | 1.9899 | 0.0034 | 2583 | 0 |
| SLC45A3--BRAF | 106 | 0 | 106.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 648 | 107.00 | 0.16 | GT | 1.5628 | AG | 1.7465 | 0.3605 | 2599 | 0 |
| TLK2--AC240565.1 | 68 | 0 | 68.00 | 0.00 | TLK2^ENSG00000146872.18 | 17137 | chr17:62560126:+ | AC240565.1^ENSG00000280136.2 | 41242 | chr17:106864:- | ONLY_REF_SPLICE | YES | 224 | 42 | 0.31 | 1.60 | GT | 1.8892 | AG | 1.8892 | 0.2313 | 1734 | 0 |
| TFG--NTRK1 | 65 | 0 | 65.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 415 | 4 | 0.16 | 13.20 | GT | 1.9329 | AG | 1.6895 | 0.2211 | 883 | 0 |
| PAX8--PPARG | 61 | 0 | 61.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 32 | 14 | 1.88 | 4.13 | GT | 1.8295 | AG | 1.9329 | 0.2075 | 1923 | 0 |
| TVP23C--CDRT4 | 50 | 0 | 50.00 | 0.00 | TVP23C^ENSG00000175106.17 | 14926 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | INCL_NON_REF_SPLICE | YES | 78 | 2 | 0.65 | 17.00 | GT | 1.9329 | AG | 1.9899 | 0.1701 | 1215 | 0 |
| TVP23C--CDRT4 | 19 | 0 | 19.00 | 0.00 | TVP23C^ENSG00000175106.17 | 14926 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | INCL_NON_REF_SPLICE | YES | 78 | 14 | 0.25 | 1.33 | GT | 1.9329 | AG | 1.6402 | 0.0646 | 137 | 0 |
| TVP23C--CDRT4 | 9 | 0 | 9.00 | 0.00 | TVP23C^ENSG00000175106.17 | 12676 | chr17:15516419:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | ONLY_REF_SPLICE | YES | 16 | 2 | 0.59 | 3.33 | GT | 1.8892 | AG | 1.9899 | 0.0306 | 1949 | 0 |
| TVP23C--CDRT4 | 6 | 0 | 6.00 | 0.00 | TVP23C^ENSG00000175106.17 | 7982 | chr17:15540433:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | ONLY_REF_SPLICE | YES | 186 | 14 | 0.04 | 0.47 | GT | 1.8323 | AG | 1.6402 | 0.0204 | 1363 | 0 |
| TVP23C--CDRT4 | 5 | 0 | 5.00 | 0.00 | TVP23C^ENSG00000175106.17 | 7982 | chr17:15540433:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | ONLY_REF_SPLICE | YES | 186 | 2 | 0.03 | 2.00 | GT | 1.8323 | AG | 1.9899 | 0.017 | 2126 | 0 |
| TVP23C--CDRT4 | 3 | 0 | 3.00 | 0.00 | TVP23C^ENSG00000175106.17 | 12676 | chr17:15516419:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | ONLY_REF_SPLICE | YES | 16 | 14 | 0.24 | 0.27 | GT | 1.8892 | AG | 1.6402 | 0.0102 | 873 | 0 |
| EGFR--SEPTIN14 | 31 | 0 | 31.00 | 0.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 0 | 19 | 32.00 | 1.60 | GT | 1.8892 | AG | 1.9899 | 0.1054 | 658 | 0 |
28 rows