File Info
- Filename
- V4_0001_RNA_0005_23H5VFLT4_s03.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001_exp0003/B23H5VFLT4/nfcore_rnafusion__73d51683--20260607-225254/fusioninspector/V4_0001_RNA_0005_23H5VFLT4_s03.FusionInspector.fusions.abridged.tsv
- Size
- 5.7 KB
- Workflow Run
- dev_rna_exp0001_exp0003_73d51683
- Published
- Jun 08, 2026 5:01 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 3411 | 2 | 3411.00 | 2.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 68 | 2066 | 49.48 | 1.65 | GT | 1.8892 | AG | 1.7819 | 11.609 | 627 | 0 |
| FGFR3--TACC3 | 13 | 1 | 13.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9838 | chr4:1806894:+ | TACC3^ENSG00000013810.20 | 27601 | chr4:1739713:+ | INCL_NON_REF_SPLICE | YES | 359 | 2204 | 0.04 | 0.01 | GG | 1.9899 | AC | 1.5219 | 0.0442 | 638 | 0 |
| TMPRSS2--ERG | 2197 | 0 | 2197.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 1 | 106 | 1099.00 | 20.54 | GT | 1.6895 | AG | 1.9219 | 7.4729 | 1104 | 0 |
| TMPRSS2--ERG | 19 | 0 | 19.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4653 | chr21:41508080:- | ERG^ENSG00000157554.19 | 28756 | chr21:38584940:- | INCL_NON_REF_SPLICE | YES | 1 | 110 | 10.00 | 0.18 | TG | 1.6402 | AT | 1.9656 | 0.0646 | 1109 | 0 |
| ETV6--NTRK3 | 927 | 3 | 927.00 | 3.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1508 | 20 | 0.62 | 44.33 | GT | 1.7819 | AG | 1.9656 | 3.1633 | 1252 | 0 |
| TPM3--NTRK1 | 793 | 1 | 793.00 | 1.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 6489 | 12 | 0.12 | 61.15 | GT | 1.9329 | AG | 1.6895 | 2.7007 | 355 | 0 |
| LMNA--NTRK1 | 783 | 2 | 783.00 | 2.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 2338 | 176 | 0.34 | 4.44 | GT | 1.7465 | AG | 1.5058 | 2.6701 | 947 | 0 |
| FGFR3--BAIAP2L1 | 767 | 0 | 767.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 68 | 35 | 11.13 | 21.33 | GT | 1.8892 | AG | 1.8062 | 2.6089 | 1171 | 0 |
| NCOA4--RET | 718 | 2 | 718.00 | 2.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1576 | 221 | 0.46 | 3.25 | GT | 1.9086 | AG | 1.8323 | 2.449 | 5144 | 0 |
| CCDC6--RET | 494 | 3 | 494.00 | 3.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1342 | 221 | 0.37 | 2.24 | GT | 1.8892 | AG | 1.8323 | 1.6905 | 2092 | 0 |
| EML4--ALK | 465 | 0 | 465.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 310 | 36 | 1.50 | 12.59 | GT | 1.6895 | AG | 1.9086 | 1.5816 | 1550 | 0 |
| SLC34A2--ROS1 | 445 | 3 | 445.00 | 2.98 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 25 | 449.00 | 17.27 | GT | 1.8892 | AG | 1.7465 | 1.5237 | 999 | 0 |
| SLC34A2--ROS1 | 3 | 3 | 3.00 | 0.02 | SLC34A2^ENSG00000157765.13 | 6088 | chr4:25664334:+ | ROS1^ENSG00000047936.11 | 58030 | chr6:117324410:- | INCL_NON_REF_SPLICE | YES | 0 | 38 | 7.00 | 0.18 | GA | 1.7465 | AT | 1.9086 | 0.0103 | 1004 | 0 |
| KIF5B--RET | 441 | 4 | 441.00 | 4.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 940 | 11 | 0.47 | 37.17 | GT | 1.9656 | AG | 1.9656 | 1.5136 | 3178 | 0 |
| KIF5B--RET | 6 | 0 | 6.00 | 0.00 | KIF5B^ENSG00000170759.11 | 18994 | chr10:32018126:- | RET^ENSG00000165731.20 | 38867 | chr10:43114515:+ | INCL_NON_REF_SPLICE | YES | 1191 | 51 | 0.01 | 0.13 | GC | 1.9329 | TC | 1.7465 | 0.0204 | 4082 | 0 |
| PAX8--PPARG | 309 | 0 | 309.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 68 | 9 | 4.49 | 31.00 | GT | 1.8295 | AG | 1.9329 | 1.051 | 1923 | 0 |
| TFG--NTRK1 | 288 | 2 | 288.00 | 2.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 842 | 12 | 0.35 | 22.38 | GT | 1.9329 | AG | 1.6895 | 0.9864 | 883 | 0 |
| CD74--ROS1 | 287 | 1 | 287.00 | 1.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 24960 | 27 | 0.01 | 10.32 | GT | 1.7819 | AG | 1.7465 | 0.9796 | 2407 | 0 |
| SLC45A3--BRAF | 266 | 0 | 266.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 1 | 876 | 133.50 | 0.30 | GT | 1.5628 | AG | 1.7465 | 0.9048 | 2599 | 0 |
| EGFR--SEPTIN14 | 183 | 0 | 183.00 | 0.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 14 | 24 | 12.27 | 7.36 | GT | 1.8892 | AG | 1.9899 | 0.6225 | 658 | 0 |
| STX16--NPEPL1 | 108 | 1 | 108.00 | 0.97 | STX16^ENSG00000124222.22 | 8855 | chr20:58673711:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 781 | 155 | 0.14 | 0.71 | GT | 1.7968 | AG | 1.8256 | 0.3707 | 1940 | 0 |
| STX16--NPEPL1 | 3 | 1 | 3.00 | 0.03 | STX16^ENSG00000124222.22 | 7774 | chr20:58671297:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 886 | 155 | 0.01 | 0.03 | GT | 1.8062 | AG | 1.8256 | 0.0103 | 2729 | 0 |
| TLK2--AC240565.1 | 56 | 0 | 56.00 | 0.00 | TLK2^ENSG00000146872.18 | 17137 | chr17:62560126:+ | AC240565.1^ENSG00000280136.2 | 41242 | chr17:106864:- | ONLY_REF_SPLICE | YES | 309 | 30 | 0.18 | 1.84 | GT | 1.8892 | AG | 1.8892 | 0.1905 | 1734 | 0 |
| TVP23C--CDRT4 | 44 | 2 | 44.00 | 2.00 | TVP23C^ENSG00000175106.17 | 14926 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | INCL_NON_REF_SPLICE | YES | 96 | 1 | 0.48 | 23.50 | GT | 1.9329 | AG | 1.9899 | 0.1565 | 1215 | 0 |
| TVP23C--CDRT4 | 22 | 0 | 22.00 | 0.00 | TVP23C^ENSG00000175106.17 | 14926 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | INCL_NON_REF_SPLICE | YES | 96 | 23 | 0.24 | 0.96 | GT | 1.9329 | AG | 1.6402 | 0.0748 | 137 | 0 |
| TVP23C--CDRT4 | 9 | 0 | 9.00 | 0.00 | TVP23C^ENSG00000175106.17 | 7982 | chr17:15540433:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | ONLY_REF_SPLICE | YES | 315 | 1 | 0.03 | 5.00 | GT | 1.8323 | AG | 1.9899 | 0.0306 | 2126 | 0 |
| TVP23C--CDRT4 | 7 | 0 | 7.00 | 0.00 | TVP23C^ENSG00000175106.17 | 12676 | chr17:15516419:- | CDRT4^ENSG00000239704.11 | 22624 | chr17:15440285:- | ONLY_REF_SPLICE | YES | 17 | 1 | 0.44 | 4.00 | GT | 1.8892 | AG | 1.9899 | 0.0238 | 1949 | 0 |
| TVP23C--CDRT4 | 1 | 0 | 1.00 | 0.00 | TVP23C^ENSG00000175106.17 | 12676 | chr17:15516419:- | CDRT4^ENSG00000239704.11 | 23702 | chr17:15438200:- | ONLY_REF_SPLICE | YES | 17 | 23 | 0.11 | 0.08 | GT | 1.8892 | AG | 1.6402 | 0.0034 | 873 | 0 |
29 rows