Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/02d8aa94e9d6d08c6c2acc10816631/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/02d8aa94e9d6d08c6c2acc10816631/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4a/708828745aa92ea96e9a7231bb51c7/tih_rna_sample_00105_23H5VFLT4_s21.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/9055d4b0da3d2fb2a1c6cf662c7616/ref_annot.bed
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/97/f63ee4c7bdb5db7845b878969ce73b/tih_rna_sample_00105_23H5VFLT4_s21.Aligned.sortedByCoord.out.bam.bai
==> STAGING COMPLETE (5 inputs)

null device 
          1 
null device 
          1 
total = 27018422
[W::hts_idx_load3] The index file is older than the data file: tih_rna_sample_00105_23H5VFLT4_s21.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	27018422
Known Splicing Events:	26657797
Partial Novel Splicing Events:	172702
Novel Splicing Events:	165691
Filtered Splicing Events:	22232

Total splicing  Junctions:	195942
Known Splicing Junctions:	160106
Partial Novel Splicing Junctions:	14386
Novel Splicing Junctions:	21450

===================================================================
Create BED file ...
Create Interact file ...