Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dd/d255a83425d153220d4da674045048/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/35/e687559129c062a059bf6cc0a1f385/GM24385_0001_RNA_0001_23H5VFLT4_s24_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dd/d255a83425d153220d4da674045048/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/35/e687559129c062a059bf6cc0a1f385/GM24385_0001_RNA_0001_23H5VFLT4_s24_R2.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory