Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/07/2c461c1e939beac185680a316c8e74/tih_rna_sample_00419_23H5VFLT4_s44.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8e/8ca2eed5f12769a2609f836fce01bc/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8e/8ca2eed5f12769a2609f836fce01bc/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory