AIH curated blacklist: matched 5 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 84
Pass (FILTER=PASS): 15 (17.9%)
Fail (FILTER=FAIL): 69 (82.1%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 5
All 5 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 19
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 14
confidence_below_min(medium<high): 6
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 3
confidence_below_min(low<high): 3
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 2
confidence_below_min(medium<high);aih_curated_blacklist: 2
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 2
total_reads_below_min(7.0<8.0);aih_curated_blacklist: 1
total_reads_below_min(6.0<8.0): 1
total_reads_below_min(3.0<8.0): 1
total_reads_below_min(3.0<8.0);aih_curated_blacklist: 1
Breakdown by confidence:
high: 15 pass, 4 fail (total: 19)
low: 0 pass, 53 fail (total: 53)
medium: 0 pass, 12 fail (total: 12)
Arriba filter: 84 rows -> 15 PASS; wrote V4_0001_RNA_0005_23H5VFLT4_s13.arriba.fusions.filtered.tsv and V4_0001_RNA_0005_23H5VFLT4_s13.arriba.fusions.filtered_pass_only.tsv
Summary written to: V4_0001_RNA_0005_23H5VFLT4_s13.arriba.fusions.filter_summary.txt