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==> STAGING COMPLETE (2404 inputs)
/// MultiQC đ | v1.21
| multiqc | MultiQC Version v1.35 now available!
| multiqc | Module(s) in config.run_modules are unknown: arriba
| multiqc | Only using modules: custom_content, fastqc, fastp, star, samtools, picard, kallisto, rseqc, preseq
| multiqc | Search path : /tmp/nxf.SZAAJwVJme
| searching | ââââââââââââââââââââââââââââââââââââââââ 100% 2439/2439
| custom_content | preseq_metrics: Found 96 General Statistics columns
| custom_content | rseqc_extra_metrics: Found 96 General Statistics columns
| custom_content | kallisto_qc_metrics: Found 96 General Statistics columns
| custom_content | seqtools_metrics: Found 96 General Statistics columns
| custom_content | rna_contamination: Found 96 General Statistics columns
| custom_content | nf-core-rnafusion-methods-description: Found 1 sample (html)
| custom_content | nf-core-rnafusion-summary: Found 1 sample (html)
| kallisto | Found 96 reports
| picard | Found 96 MarkDuplicates reports
| preseq | Found 96 reports
| rseqc | Found 96 read_distribution reports
| rseqc | Found 96 inner_distance reports
| rseqc | Found 96 read_duplication reports
| rseqc | Found 96 junction_annotation reports
| rseqc | Found 96 junction_saturation reports
| rseqc | Found 96 infer_experiment reports
| rseqc | Found 96 bam_stat reports
| star | Found 96 reports and 96 gene count files
| fastp | Found 96 reports
| fastqc | Found 384 reports
| fastqc | Found 192 reports
| multiqc | Report : multiqc_report.html
| multiqc | Data : multiqc_data
| multiqc | Plots : multiqc_plots
| multiqc | MultiQC complete