.command.out - Workdir - NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:PREDICT_CONTAMINATION (tih_rna_sample_00088_23H5VFLT4_s02)

File Info

Filename: .command.out
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/14/7e9232a0a5aefa6a874b898f21abd4/.command.out
Size: 341 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:PREDICT_CONTAMINATION (tih_rna_sample_00088_23H5VFLT4_s02)
Attempt

Content

Predicting contamination for 1 sample(s)...
Detection threshold: VAF_p90 < 0.9999
Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65

  tih_rna_sample_00088_23H5VFLT4_s02: vaf_p90=0.999434 -> CONTAMINATED (~0.0%)

Output saved to: tih_rna_sample_00088_23H5VFLT4_s02.predictions.csv
Summary: 1/1 samples flagged as contaminated