Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/38/767d1e45f086e72caea55508ff7db0/GM24385_0001_RNA_0001_23H5VFLT4_s08.starfusion.starfusion.fusion_predictions.filtered_pass_only.tsv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-5b456d70-fab3-4fcc-916c-bc437f411fba/5f/4d32fc1f4ec7fe5ef236279e51ead4/dummy_file_fusioncatcher.txt
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7d/7af082dc1586253625df97bcf144a9/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7d/7af082dc1586253625df97bcf144a9/.command.run
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/fusion_report_db
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/12/cf6b397e29b320ded20fac583269bb/GM24385_0001_RNA_0001_23H5VFLT4_s08.arriba.fusions.filtered_pass_only.tsv
==> STAGING COMPLETE (6 inputs)
[32mRunning application...[0m
TLK2--AC240565.1
starfusion
STX16--NPEPL1
starfusion
arriba
TVP23C--CDRT4
arriba
0%| | 0/3 [00:00<?, ?it/s]
Processing TLK2--AC240565.1: 0%| | 0/3 [00:00<?, ?it/s]
Processing TLK2--AC240565.1: 33%|███▎ | 1/3 [00:00<00:00, 9.25it/s]
Processing STX16--NPEPL1: 33%|███▎ | 1/3 [00:00<00:00, 9.25it/s]
Processing STX16--NPEPL1: 67%|██████▋ | 2/3 [00:00<00:00, 9.47it/s]
Processing TVP23C--CDRT4: 67%|██████▋ | 2/3 [00:00<00:00, 9.47it/s]
Processing TVP23C--CDRT4: 100%|██████████| 3/3 [00:00<00:00, 9.55it/s]
Processing TVP23C--CDRT4: 100%|██████████| 3/3 [00:00<00:00, 9.50it/s]
cat: fusion_report_db/DB-timestamp.txt: No such file or directory