AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 120
Pass (FILTER=PASS): 20 (16.7%)
Fail (FILTER=FAIL): 100 (83.3%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 16
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 11
confidence_below_min(medium<high): 7
confidence_below_min(low<high): 6
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 3
total_reads_below_min(3.0<8.0): 2
confidence_below_min(medium<high);aih_curated_blacklist: 2
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 2
aih_curated_blacklist: 1
Breakdown by confidence:
high: 20 pass, 3 fail (total: 23)
low: 0 pass, 78 fail (total: 78)
medium: 0 pass, 19 fail (total: 19)
Arriba filter: 120 rows -> 20 PASS; wrote V4_0001_RNA_0001_23H5VFLT4_s13.arriba.fusions.filtered.tsv and V4_0001_RNA_0001_23H5VFLT4_s13.arriba.fusions.filtered_pass_only.tsv
Summary written to: V4_0001_RNA_0001_23H5VFLT4_s13.arriba.fusions.filter_summary.txt