.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_INDEX_ALIGNMENT_CRAM (tih_rna_sample_00097_23H5VFLT4_s12)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9f/7254f6bab2ceee5fc6763c9eebdef5/.command.log
Size: 510 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_INDEX_ALIGNMENT_CRAM (tih_rna_sample_00097_23H5VFLT4_s12)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a1/f70df9e334cec7247acb277c0cc03f/tih_rna_sample_00097_23H5VFLT4_s12.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9f/7254f6bab2ceee5fc6763c9eebdef5/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9f/7254f6bab2ceee5fc6763c9eebdef5/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory