.command.err - Workdir - NFCORE_RNAFUSION:RNAFUSION:KALLISTO_INDEX (Homo_sapiens.GRCh38.102.cdna.all.fa.gz)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2e/b98e3c81f942c27eced3763638b9e2/.command.err
Size: 520 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:KALLISTO_INDEX (Homo_sapiens.GRCh38.102.cdna.all.fa.gz)
Attempt

Content

[build] loading fasta file Homo_sapiens.GRCh38.102.cdna.all.fa.gz
[build] k-mer length: 31
[build] warning: clipped off poly-A tail (longer than 10)
        from 1490 target sequences
[build] warning: replaced 100005 non-ACGUT characters in the input sequence
        with pseudorandom nucleotides
[build] building MPHF
[build] creating equivalence classes ... 
[build] target de Bruijn graph has k-mer length 31 and minimizer length 23
[build] target de Bruijn graph has 983294 contigs and contains 112035259 k-mers