AIH curated blacklist: matched 3 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 65
Pass (FILTER=PASS): 4 (6.2%)
Fail (FILTER=FAIL): 61 (93.8%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 3
All 3 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 18
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 4
confidence_below_min(medium<high): 4
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 3
confidence_below_min(medium<high);aih_curated_blacklist: 2
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 2
confidence_below_min(low<high): 2
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 1
total_reads_below_min(7.0<8.0): 1
total_reads_below_min(6.0<8.0): 1
Breakdown by confidence:
high: 4 pass, 4 fail (total: 8)
low: 0 pass, 42 fail (total: 42)
medium: 0 pass, 15 fail (total: 15)
Arriba filter: 65 rows -> 4 PASS; wrote V4_0001_RNA_0005_23H5VFLT4_s31.arriba.fusions.filtered.tsv and V4_0001_RNA_0005_23H5VFLT4_s31.arriba.fusions.filtered_pass_only.tsv
Summary written to: V4_0001_RNA_0005_23H5VFLT4_s31.arriba.fusions.filter_summary.txt