Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1d/084e1212dea19b585ff4f3e3b5ff3c/tih_rna_sample_00218_23H5VFLT4_s10.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/2a6ffcb3d89d873be8a7f9cbfcbff5/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/2a6ffcb3d89d873be8a7f9cbfcbff5/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory