AIH curated blacklist: matched 8 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 195
Pass (FILTER=PASS): 29 (14.9%)
Fail (FILTER=FAIL): 166 (85.1%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 8
All 8 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 49
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 19
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 18
confidence_below_min(low<high): 10
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 6
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 2
Breakdown by confidence:
high: 29 pass, 2 fail (total: 31)
low: 0 pass, 74 fail (total: 74)
medium: 0 pass, 90 fail (total: 90)
Arriba filter: 195 rows -> 29 PASS; wrote tih_rna_sample_00377_23H5VFLT4_s23.arriba.fusions.filtered.tsv and tih_rna_sample_00377_23H5VFLT4_s23.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00377_23H5VFLT4_s23.arriba.fusions.filter_summary.txt