Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/d7637e3962706ee34350d888b3060b/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d9/004f37ed3faaefc86ff6d2ddcf9a37/tih_rna_sample_00124_23H5VFLT4_s31.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/d7637e3962706ee34350d888b3060b/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory