.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (GM24385_0001_RNA_0001_23H5VFLT4_s08)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/69575e6afb44ba390d85bc4185fe7e/.command.log
Size: 1.2 KB
Task: NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (GM24385_0001_RNA_0001_23H5VFLT4_s08)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7d/7af082dc1586253625df97bcf144a9/GM24385_0001_RNA_0001_23H5VFLT4_s08_fusionreport_index.html
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/46/0a0820b20b88068329de19028d43ad/GM24385_0001_RNA_0001_23H5VFLT4_s08.FusionInspector.fusions.abridged.tsv.annotated.coding_effect
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/69575e6afb44ba390d85bc4185fe7e/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/hgnc/hgnc_complete_set.txt
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/hgnc/HGNC-DB-timestamp.txt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7d/7af082dc1586253625df97bcf144a9/GM24385_0001_RNA_0001_23H5VFLT4_s08.fusions.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/12/cf6b397e29b320ded20fac583269bb/GM24385_0001_RNA_0001_23H5VFLT4_s08.arriba.fusions.filtered_pass_only.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/69575e6afb44ba390d85bc4185fe7e/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/b0dc884236d8e8c977af77b57fdaf9/GM24385_0001_RNA_0001_23H5VFLT4_s08.tsv
==> STAGING COMPLETE (9 inputs)