Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d2/9b41c0ac3053136c788aea75313f04/V4_0001_RNA_0005_23H5VFLT4_s04_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/2a0d4f0f2e47109f26e21920adf487/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/48/acb1f0be6bb5c291a868481b50963a/V4_0001_RNA_0005_23H5VFLT4_s04.Chimeric.out.junction
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/2a0d4f0f2e47109f26e21920adf487/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d2/9b41c0ac3053136c788aea75313f04/V4_0001_RNA_0005_23H5VFLT4_s04_1.fastp.fastq.gz
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.Yy4zpyB0U9/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.Yy4zpyB0U9/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary
-sample contains 293600266 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.Yy4zpyB0U9/ctat_genome_lib_build_dir  -J /tmp/nxf.Yy4zpyB0U9/V4_0001_RNA_0005_23H5VFLT4_s04.Chimeric.out.junction  -O /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.Yy4zpyB0U9/V4_0001_RNA_0005_23H5VFLT4_s04.Chimeric.out.junction
-building interval tree based on /tmp/nxf.Yy4zpyB0U9/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[2930000], rate=86558.35/min -building interval tree based on /tmp/nxf.Yy4zpyB0U9/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[267000-building interval tree based on /tmp/nxf.Yy4zpyB0U9/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[2890000], rate=65286.14/min 
[2900000], rate=65071.05/min 
[2910000], rate=64618.80/min -building interval tree based on /tmp/nxf.Yy4zpyB0U9/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=35294.12/min 
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[2280000], rate=63627.91/min 
[2290000], rate=63670.06/min 
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[2590000], rate=61495.84/min 
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[2890000], rate=56098.35/min 
[2900000], rate=55912.60/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.Yy4zpyB0U9/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
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 3139534.88 reads per min processed...  
 3120000.00 reads per min processed...  
 3101123.60 reads per min processed...  
 3117318.44 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.Yy4zpyB0U9/V4_0001_RNA_0005_23H5VFLT4_s04.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.Yy4zpyB0U9/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -635677.177019
EM: Round [1] log likelihood: -635308.335348
EM: Round [2] log likelihood: -635177.034932
EM: Round [3] log likelihood: -635114.550425
EM: Round [4] log likelihood: -635080.747449
EM: Round [5] log likelihood: -635061.069944
EM: Round [6] log likelihood: -635048.966978
EM: Round [7] log likelihood: -635041.155305
EM: Round [8] log likelihood: -635035.887760
EM: Round [9] log likelihood: -635032.193459
EM: Round [10] log likelihood: -635029.511747
EM: Round [11] log likelihood: -635027.506608
EM: Round [12] log likelihood: -635025.969183
EM: Round [13] log likelihood: -635024.764997
EM: Round [14] log likelihood: -635023.804550
EM: Round [15] log likelihood: -635023.026447
EM: Round [16] log likelihood: -635022.387429
EM: Round [17] log likelihood: -635021.856291
EM: Round [18] log likelihood: -635021.410058
EM: Round [19] log likelihood: -635021.031519
EM: Round [20] log likelihood: -635020.707581
EM: Round [21] log likelihood: -635020.428148
EM: Round [22] log likelihood: -635020.185342
EM: Round [23] log likelihood: -635019.972948
EM: Round [24] log likelihood: -635019.786016
EM: Round [25] log likelihood: -635019.620566
EM: Round [26] log likelihood: -635019.473373
EM: Round [27] log likelihood: -635019.341800
EM: Round [28] log likelihood: -635019.223675
EM: Round [29] log likelihood: -635019.117200
EM: Round [30] log likelihood: -635019.020872
EM: Round [31] log likelihood: -635018.933429
EM: Round [32] log likelihood: -635018.853803
EM: Round [33] log likelihood: -635018.781089
EM: Round [34] log likelihood: -635018.714510
EM: Round [35] log likelihood: -635018.653401
EM: Round [36] log likelihood: -635018.597186
EM: Round [37] log likelihood: -635018.545366
EM: Round [38] log likelihood: -635018.497504
EM: Round [39] log likelihood: -635018.453221
EM: Round [40] log likelihood: -635018.412181
EM: Round [41] log likelihood: -635018.374088
EM: Round [42] log likelihood: -635018.338679
EM: Round [43] log likelihood: -635018.305722
EM: Round [44] log likelihood: -635018.275009
EM: Round [45] log likelihood: -635018.246353
EM: Round [46] log likelihood: -635018.219588
EM: Round [47] log likelihood: -635018.194564
EM: Round [48] log likelihood: -635018.171143
EM: Round [49] log likelihood: -635018.149205
EM: Round [50] log likelihood: -635018.128637
EM: Round [51] log likelihood: -635018.109338
EM: Round [52] log likelihood: -635018.091216
EM: Round [53] log likelihood: -635018.074187
EM: Round [54] log likelihood: -635018.058174
EM: Round [55] log likelihood: -635018.043106
EM: Round [56] log likelihood: -635018.028918
EM: Round [57] log likelihood: -635018.015552
EM: Round [58] log likelihood: -635018.002952
EM: Round [59] log likelihood: -635017.991068
EM: Round [60] log likelihood: -635017.979853
EM: Round [61] log likelihood: -635017.969264
EM: Round [62] log likelihood: -635017.959262
EM: Round [63] log likelihood: -635017.949809
EM: Round [64] log likelihood: -635017.940871
EM: Round [65] log likelihood: -635017.932417
EM: Round [66] log likelihood: -635017.924417
EM: Round [67] log likelihood: -635017.916843
EM: Round [68] log likelihood: -635017.909670
EM: Round [69] log likelihood: -635017.902874
EM: Round [70] log likelihood: -635017.896433
EM: Round [71] log likelihood: -635017.890325
EM: Round [72] log likelihood: -635017.884533
EM: Round [73] log likelihood: -635017.879037
EM: Round [74] log likelihood: -635017.873820
EM: Round [75] log likelihood: -635017.868867
EM: Round [76] log likelihood: -635017.864163
EM: Round [77] log likelihood: -635017.859694
EM: Round [78] log likelihood: -635017.855447
EM: Round [79] log likelihood: -635017.851410
EM: Round [80] log likelihood: -635017.847571
EM: Round [81] log likelihood: -635017.843919
EM: Round [82] log likelihood: -635017.840444
EM: Round [83] log likelihood: -635017.837137
EM: Round [84] log likelihood: -635017.833989
EM: Round [85] log likelihood: -635017.830991
EM: Round [86] log likelihood: -635017.828136
EM: Round [87] log likelihood: -635017.825415
EM: Round [88] log likelihood: -635017.822823
EM: Round [89] log likelihood: -635017.820351
EM: Round [90] log likelihood: -635017.817995
EM: Round [91] log likelihood: -635017.815747
EM: Round [92] log likelihood: -635017.813603
EM: Round [93] log likelihood: -635017.811558
EM: Round [94] log likelihood: -635017.809605
EM: Round [95] log likelihood: -635017.807741
EM: Round [96] log likelihood: -635017.805962
EM: Round [97] log likelihood: -635017.804262
EM: Round [98] log likelihood: -635017.802638
EM: Round [99] log likelihood: -635017.801086
EM: Round [100] log likelihood: -635017.799603
EM: Round [101] log likelihood: -635017.798186
EM: Round [102] log likelihood: -635017.796830
EM: Round [103] log likelihood: -635017.795534
EM: Round [104] log likelihood: -635017.794294
EM: Round [105] log likelihood: -635017.793107
EM: Round [106] log likelihood: -635017.791972
EM: Round [107] log likelihood: -635017.790885
EM: Round [108] log likelihood: -635017.789844
EM: Round [109] log likelihood: -635017.788848
EM: Round [110] log likelihood: -635017.787893
EM: Round [111] log likelihood: -635017.786979
EM: Round [112] log likelihood: -635017.786103
EM: Round [113] log likelihood: -635017.785263
EM: Round [114] log likelihood: -635017.784458
EM: Round [115] log likelihood: -635017.783686
EM: Round [116] log likelihood: -635017.782946
EM: Round [117] log likelihood: -635017.782236
EM: Round [118] log likelihood: -635017.781555
EM: Round [119] log likelihood: -635017.780901
EM: Round [120] log likelihood: -635017.780274
EM: Round [121] log likelihood: -635017.779671
EM: Round [122] log likelihood: -635017.779093
EM: Round [123] log likelihood: -635017.778538
EM: Round [124] log likelihood: -635017.778004
EM: Round [125] log likelihood: -635017.777491
EM: Round [126] log likelihood: -635017.776999
EM: Round [127] log likelihood: -635017.776525
EM: Round [128] log likelihood: -635017.776070
EM: Round [129] log likelihood: -635017.775632
EM: Round [130] log likelihood: -635017.775211
EM: Round [131] log likelihood: -635017.774806
EM: Round [132] log likelihood: -635017.774417
EM: Round [133] log likelihood: -635017.774041
EM: Round [134] log likelihood: -635017.773680
EM: Round [135] log likelihood: -635017.773333
EM: Round [136] log likelihood: -635017.772998
EM: Round [137] log likelihood: -635017.772676
EM: Round [138] log likelihood: -635017.772365
EM: Round [139] log likelihood: -635017.772066
EM: Round [140] log likelihood: -635017.771778
EM: Round [141] log likelihood: -635017.771500
EM: Round [142] log likelihood: -635017.771231
EM: Round [143] log likelihood: -635017.770973
EM: Round [144] log likelihood: -635017.770723
EM: Round [145] log likelihood: -635017.770483
EM: Round [146] log likelihood: -635017.770251
EM: Round [147] log likelihood: -635017.770026
EM: Round [148] log likelihood: -635017.769810
EM: Round [149] log likelihood: -635017.769601
EM: Round [150] log likelihood: -635017.769399
EM: Round [151] log likelihood: -635017.769204
EM: Round [152] log likelihood: -635017.769016
EM: Round [153] log likelihood: -635017.768834
EM: Round [154] log likelihood: -635017.768658
EM: Round [155] log likelihood: -635017.768487
EM: Round [156] log likelihood: -635017.768323
EM: Round [157] log likelihood: -635017.768163
EM: Round [158] log likelihood: -635017.768009
EM: Round [159] log likelihood: -635017.767860
EM: Round [160] log likelihood: -635017.767716
EM: Round [161] log likelihood: -635017.767576
EM: Round [162] log likelihood: -635017.767440
EM: Round [163] log likelihood: -635017.767309
EM: Round [164] log likelihood: -635017.767182
EM: Round [165] log likelihood: -635017.767059
EM: Round [166] log likelihood: -635017.766939
EM: Round [167] log likelihood: -635017.766824
EM: Round [168] log likelihood: -635017.766711
EM: Round [169] log likelihood: -635017.766602
EM: Round [170] log likelihood: -635017.766497
EM: Round [171] log likelihood: -635017.766394
EM: Round [172] log likelihood: -635017.766294
EM: Stopping iterations at round 172 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -635230.174520
EM: Round [1] log likelihood: -634926.261790
EM: Round [2] log likelihood: -634823.812927
EM: Round [3] log likelihood: -634776.694519
EM: Round [4] log likelihood: -634752.000299
EM: Round [5] log likelihood: -634738.123985
EM: Round [6] log likelihood: -634729.916743
EM: Round [7] log likelihood: -634724.832535
EM: Round [8] log likelihood: -634721.539495
EM: Round [9] log likelihood: -634719.313865
EM: Round [10] log likelihood: -634717.749158
EM: Round [11] log likelihood: -634716.609550
EM: Round [12] log likelihood: -634715.753606
EM: Round [13] log likelihood: -634715.093567
EM: Round [14] log likelihood: -634714.573107
EM: Round [15] log likelihood: -634714.154878
EM: Round [16] log likelihood: -634713.813350
EM: Round [17] log likelihood: -634713.530582
EM: Round [18] log likelihood: -634713.293652
EM: Round [19] log likelihood: -634713.093050
EM: Round [20] log likelihood: -634712.921635
EM: Round [21] log likelihood: -634712.773962
EM: Round [22] log likelihood: -634712.645808
EM: Round [23] log likelihood: -634712.533861
EM: Round [24] log likelihood: -634712.435487
EM: Round [25] log likelihood: -634712.348571
EM: Round [26] log likelihood: -634712.271396
EM: Round [27] log likelihood: -634712.202560
EM: Round [28] log likelihood: -634712.140902
EM: Round [29] log likelihood: -634712.085460
EM: Round [30] log likelihood: -634712.035428
EM: Round [31] log likelihood: -634711.990126
EM: Round [32] log likelihood: -634711.948980
EM: Round [33] log likelihood: -634711.911499
EM: Round [34] log likelihood: -634711.877263
EM: Round [35] log likelihood: -634711.845912
EM: Round [36] log likelihood: -634711.817134
EM: Round [37] log likelihood: -634711.790658
EM: Round [38] log likelihood: -634711.766249
EM: Round [39] log likelihood: -634711.743699
EM: Round [40] log likelihood: -634711.722829
EM: Round [41] log likelihood: -634711.703479
EM: Round [42] log likelihood: -634711.685508
EM: Round [43] log likelihood: -634711.668791
EM: Round [44] log likelihood: -634711.653218
EM: Round [45] log likelihood: -634711.638690
EM: Round [46] log likelihood: -634711.625119
EM: Round [47] log likelihood: -634711.612425
EM: Round [48] log likelihood: -634711.600539
EM: Round [49] log likelihood: -634711.589395
EM: Round [50] log likelihood: -634711.578936
EM: Round [51] log likelihood: -634711.569110
EM: Round [52] log likelihood: -634711.559869
EM: Round [53] log likelihood: -634711.551172
EM: Round [54] log likelihood: -634711.542978
EM: Round [55] log likelihood: -634711.535252
EM: Round [56] log likelihood: -634711.527962
EM: Round [57] log likelihood: -634711.521077
EM: Round [58] log likelihood: -634711.514571
EM: Round [59] log likelihood: -634711.508418
EM: Round [60] log likelihood: -634711.502596
EM: Round [61] log likelihood: -634711.497082
EM: Round [62] log likelihood: -634711.491859
EM: Round [63] log likelihood: -634711.486907
EM: Round [64] log likelihood: -634711.482209
EM: Round [65] log likelihood: -634711.477751
EM: Round [66] log likelihood: -634711.473519
EM: Round [67] log likelihood: -634711.469497
EM: Round [68] log likelihood: -634711.465675
EM: Round [69] log likelihood: -634711.462041
EM: Round [70] log likelihood: -634711.458584
EM: Round [71] log likelihood: -634711.455294
EM: Round [72] log likelihood: -634711.452162
EM: Round [73] log likelihood: -634711.449179
EM: Round [74] log likelihood: -634711.446337
EM: Round [75] log likelihood: -634711.443628
EM: Round [76] log likelihood: -634711.441045
EM: Round [77] log likelihood: -634711.438581
EM: Round [78] log likelihood: -634711.436230
EM: Round [79] log likelihood: -634711.433987
EM: Round [80] log likelihood: -634711.431845
EM: Round [81] log likelihood: -634711.429800
EM: Round [82] log likelihood: -634711.427846
EM: Round [83] log likelihood: -634711.425979
EM: Round [84] log likelihood: -634711.424194
EM: Round [85] log likelihood: -634711.422488
EM: Round [86] log likelihood: -634711.420856
EM: Round [87] log likelihood: -634711.419295
EM: Round [88] log likelihood: -634711.417802
EM: Round [89] log likelihood: -634711.416372
EM: Round [90] log likelihood: -634711.415004
EM: Round [91] log likelihood: -634711.413694
EM: Round [92] log likelihood: -634711.412439
EM: Round [93] log likelihood: -634711.411237
EM: Round [94] log likelihood: -634711.410085
EM: Round [95] log likelihood: -634711.408981
EM: Round [96] log likelihood: -634711.407922
EM: Round [97] log likelihood: -634711.406908
EM: Round [98] log likelihood: -634711.405934
EM: Round [99] log likelihood: -634711.405001
EM: Round [100] log likelihood: -634711.404105
EM: Round [101] log likelihood: -634711.403245
EM: Round [102] log likelihood: -634711.402420
EM: Round [103] log likelihood: -634711.401628
EM: Round [104] log likelihood: -634711.400868
EM: Round [105] log likelihood: -634711.400137
EM: Round [106] log likelihood: -634711.399435
EM: Round [107] log likelihood: -634711.398761
EM: Round [108] log likelihood: -634711.398113
EM: Round [109] log likelihood: -634711.397490
EM: Round [110] log likelihood: -634711.396891
EM: Round [111] log likelihood: -634711.396315
EM: Round [112] log likelihood: -634711.395762
EM: Round [113] log likelihood: -634711.395229
EM: Round [114] log likelihood: -634711.394716
EM: Round [115] log likelihood: -634711.394223
EM: Round [116] log likelihood: -634711.393748
EM: Round [117] log likelihood: -634711.393291
EM: Round [118] log likelihood: -634711.392851
EM: Round [119] log likelihood: -634711.392427
EM: Round [120] log likelihood: -634711.392019
EM: Round [121] log likelihood: -634711.391625
EM: Round [122] log likelihood: -634711.391246
EM: Round [123] log likelihood: -634711.390881
EM: Round [124] log likelihood: -634711.390529
EM: Round [125] log likelihood: -634711.390189
EM: Round [126] log likelihood: -634711.389861
EM: Round [127] log likelihood: -634711.389545
EM: Round [128] log likelihood: -634711.389241
EM: Round [129] log likelihood: -634711.388946
EM: Round [130] log likelihood: -634711.388662
EM: Round [131] log likelihood: -634711.388388
EM: Round [132] log likelihood: -634711.388124
EM: Round [133] log likelihood: -634711.387868
EM: Round [134] log likelihood: -634711.387621
EM: Round [135] log likelihood: -634711.387383
EM: Round [136] log likelihood: -634711.387152
EM: Round [137] log likelihood: -634711.386929
EM: Round [138] log likelihood: -634711.386714
EM: Round [139] log likelihood: -634711.386506
EM: Round [140] log likelihood: -634711.386304
EM: Round [141] log likelihood: -634711.386109
EM: Round [142] log likelihood: -634711.385921
EM: Round [143] log likelihood: -634711.385739
EM: Round [144] log likelihood: -634711.385562
EM: Round [145] log likelihood: -634711.385391
EM: Round [146] log likelihood: -634711.385225
EM: Round [147] log likelihood: -634711.385065
EM: Round [148] log likelihood: -634711.384910
EM: Round [149] log likelihood: -634711.384759
EM: Round [150] log likelihood: -634711.384613
EM: Round [151] log likelihood: -634711.384472
EM: Round [152] log likelihood: -634711.384335
EM: Round [153] log likelihood: -634711.384202
EM: Round [154] log likelihood: -634711.384073
EM: Round [155] log likelihood: -634711.383947
EM: Round [156] log likelihood: -634711.383826
EM: Round [157] log likelihood: -634711.383708
EM: Round [158] log likelihood: -634711.383594
EM: Round [159] log likelihood: -634711.383482
EM: Round [160] log likelihood: -634711.383374
EM: Round [161] log likelihood: -634711.383269
EM: Round [162] log likelihood: -634711.383167
EM: Round [163] log likelihood: -634711.383068
EM: Stopping iterations at round 163 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.Yy4zpyB0U9/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.Yy4zpyB0U9/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.Yy4zpyB0U9/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 293600266 > /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.Yy4zpyB0U9/ctat_genome_lib_build_dir > /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.Yy4zpyB0U9/ctat_genome_lib_build_dir --annotate /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.Yy4zpyB0U9/ctat_genome_lib_build_dir
-done, see /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.Yy4zpyB0U9/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 2351, filtered: 12085)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.Yy4zpyB0U9/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.Yy4zpyB0U9/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000275014.1]
WARNING, no entry stored in dbm for [ENSG00000264322.2]
WARNING, no entry stored in dbm for [ENSG00000264916.2]
WARNING, no entry stored in dbm for [ENSG00000266467.2]
WARNING, no entry stored in dbm for [ENSG00000244376.3]
WARNING, no entry stored in dbm for [ENSG00000243738.3]
WARNING, no entry stored in dbm for [ENSG00000263988.2]
WARNING, no entry stored in dbm for [ENSG00000201533.1]
WARNING, no entry stored in dbm for [ENSG00000245571.7]
WARNING, no entry stored in dbm for [ENSG00000230295.1]
WARNING, no entry stored in dbm for [ENSG00000236948.2]
WARNING, no entry stored in dbm for [ENSG00000281358.1]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000267515.1]
WARNING, no entry stored in dbm for [ENSG00000258561.2]
WARNING, no entry stored in dbm for [ENSG00000250493.2]
WARNING, no entry stored in dbm for [ENSG00000285835.1]
WARNING, no entry stored in dbm for [ENSG00000235759.1]
WARNING, no entry stored in dbm for [ENSG00000231856.2]
WARNING, no entry stored in dbm for [ENSG00000213985.4]
WARNING, no entry stored in dbm for [ENSG00000235499.1]
WARNING, no entry stored in dbm for [ENSG00000287700.1]
WARNING, no entry stored in dbm for [ENSG00000241832.1]
WARNING, no entry stored in dbm for [ENSG00000256967.1]
WARNING, no entry stored in dbm for [ENSG00000226226.1]
WARNING, no entry stored in dbm for [ENSG00000264907.1]
WARNING, no entry stored in dbm for [ENSG00000230748.1]
WARNING, no entry stored in dbm for [ENSG00000238086.5]
WARNING, no entry stored in dbm for [ENSG00000227284.2]
WARNING, no entry stored in dbm for [ENSG00000260793.2]
WARNING, no entry stored in dbm for [ENSG00000236778.8]
WARNING, no entry stored in dbm for [ENSG00000249923.1]
WARNING, no entry stored in dbm for [ENSG00000257176.3]
WARNING, no entry stored in dbm for [ENSG00000226919.4]
WARNING, no entry stored in dbm for [ENSG00000265787.2]
WARNING, no entry stored in dbm for [ENSG00000215068.8]
WARNING, no entry stored in dbm for [ENSG00000267586.7]
WARNING, no entry stored in dbm for [ENSG00000237268.2]
WARNING, no entry stored in dbm for [ENSG00000251095.7]
WARNING, no entry stored in dbm for [ENSG00000274602.5]
WARNING, no entry stored in dbm for [ENSG00000265480.5]
WARNING, no entry stored in dbm for [ENSG00000280725.2]
WARNING, no entry stored in dbm for [ENSG00000249023.1]
WARNING, no entry stored in dbm for [ENSG00000232416.3]
WARNING, no entry stored in dbm for [ENSG00000221990.4]
WARNING, no entry stored in dbm for [ENSG00000214765.8]
WARNING, no entry stored in dbm for [ENSG00000206120.11]
WARNING, no entry stored in dbm for [ENSG00000286887.1]
WARNING, no entry stored in dbm for [ENSG00000262480.2]
WARNING, no entry stored in dbm for [ENSG00000236778.8]
WARNING, no entry stored in dbm for [ENSG00000265313.7]
WARNING, no entry stored in dbm for [ENSG00000223677.1]
WARNING, no entry stored in dbm for [ENSG00000247556.6]
WARNING, no entry stored in dbm for [ENSG00000223482.8]
WARNING, no entry stored in dbm for [ENSG00000254859.1]
WARNING, no entry stored in dbm for [ENSG00000242536.2]
WARNING, no entry stored in dbm for [ENSG00000229852.4]
WARNING, no entry stored in dbm for [ENSG00000173209.23]
WARNING, no entry stored in dbm for [ENSG00000226950.8]
WARNING, no entry stored in dbm for [ENSG00000243069.8]
WARNING, no entry stored in dbm for [ENSG00000287424.1]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000228623.6]
WARNING, no entry stored in dbm for [ENSG00000249074.1]
WARNING, no entry stored in dbm for [ENSG00000237037.9]
WARNING, no entry stored in dbm for [ENSG00000224617.1]
WARNING, no entry stored in dbm for [ENSG00000226394.2]
WARNING, no entry stored in dbm for [ENSG00000253118.1]
WARNING, no entry stored in dbm for [ENSG00000283072.3]
WARNING, no entry stored in dbm for [ENSG00000254701.3]
WARNING, no entry stored in dbm for [ENSG00000226779.1]
WARNING, no entry stored in dbm for [ENSG00000267858.6]
WARNING, no entry stored in dbm for [ENSG00000280011.1]
WARNING, no entry stored in dbm for [ENSG00000274487.2]
WARNING, no entry stored in dbm for [ENSG00000197847.12]
WARNING, no entry stored in dbm for [ENSG00000234072.1]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000267478.1]
WARNING, no entry stored in dbm for [ENSG00000288577.1]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000284286.1]
WARNING, no entry stored in dbm for [ENSG00000228340.6]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000224184.6]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000253522.6]
WARNING, no entry stored in dbm for [ENSG00000234883.6]
WARNING, no entry stored in dbm for [ENSG00000268654.2]
WARNING, no entry stored in dbm for [ENSG00000239883.8]
WARNING, no entry stored in dbm for [ENSG00000245466.1]
WARNING, no entry stored in dbm for [ENSG00000197880.9]
WARNING, no entry stored in dbm for [ENSG00000244055.2]
WARNING, no entry stored in dbm for [ENSG00000228335.1]
WARNING, no entry stored in dbm for [ENSG00000226620.8]
WARNING, no entry stored in dbm for [ENSG00000287265.1]
WARNING, no entry stored in dbm for [ENSG00000225889.9]
WARNING, no entry stored in dbm for [ENSG00000235703.6]
WARNING, no entry stored in dbm for [ENSG00000267278.6]
WARNING, no entry stored in dbm for [ENSG00000248973.3]
WARNING, no entry stored in dbm for [ENSG00000259234.6]
WARNING, no entry stored in dbm for [ENSG00000254519.5]
WARNING, no entry stored in dbm for [ENSG00000281649.2]
WARNING, no entry stored in dbm for [ENSG00000271978.1]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000227110.7]
WARNING, no entry stored in dbm for [ENSG00000236675.1]
WARNING, no entry stored in dbm for [ENSG00000224164.2]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000231566.2]
WARNING, no entry stored in dbm for [ENSG00000232613.6]
WARNING, no entry stored in dbm for [ENSG00000271584.2]
WARNING, no entry stored in dbm for [ENSG00000277851.2]
WARNING, no entry stored in dbm for [ENSG00000180712.4]
WARNING, no entry stored in dbm for [ENSG00000248150.1]
WARNING, no entry stored in dbm for [ENSG00000234634.2]
WARNING, no entry stored in dbm for [ENSG00000248489.2]
WARNING, no entry stored in dbm for [ENSG00000236008.3]
WARNING, no entry stored in dbm for [ENSG00000236790.6]
WARNING, no entry stored in dbm for [ENSG00000272259.5]
WARNING, no entry stored in dbm for [ENSG00000258602.1]
WARNING, no entry stored in dbm for [ENSG00000214900.11]
WARNING, no entry stored in dbm for [ENSG00000261008.7]
WARNING, no entry stored in dbm for [ENSG00000225975.7]
WARNING, no entry stored in dbm for [ENSG00000237877.7]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000249534.2]
WARNING, no entry stored in dbm for [ENSG00000284543.1]
WARNING, no entry stored in dbm for [ENSG00000242512.9]
WARNING, no entry stored in dbm for [ENSG00000245937.8]
WARNING, no entry stored in dbm for [ENSG00000245937.8]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000167459.17]
WARNING, no entry stored in dbm for [ENSG00000235703.6]
WARNING, no entry stored in dbm for [ENSG00000263753.8]
WARNING, no entry stored in dbm for [ENSG00000226067.7]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000238121.6]
WARNING, no entry stored in dbm for [ENSG00000238230.2]
WARNING, no entry stored in dbm for [ENSG00000227456.9]
WARNING, no entry stored in dbm for [ENSG00000286217.2]
WARNING, no entry stored in dbm for [ENSG00000284196.3]
WARNING, no entry stored in dbm for [ENSG00000270112.4]
WARNING, no entry stored in dbm for [ENSG00000201458.1]
WARNING, no entry stored in dbm for [ENSG00000272100.1]
WARNING, no entry stored in dbm for [ENSG00000287067.1]
WARNING, no entry stored in dbm for [ENSG00000214439.4]
WARNING, no entry stored in dbm for [ENSG00000253658.6]
WARNING, no entry stored in dbm for [ENSG00000228384.4]
WARNING, no entry stored in dbm for [ENSG00000232373.2]
WARNING, no entry stored in dbm for [ENSG00000203709.12]
WARNING, no entry stored in dbm for [ENSG00000225470.8]
WARNING, no entry stored in dbm for [ENSG00000200434.1]
WARNING, no entry stored in dbm for [ENSG00000197536.11]
WARNING, no entry stored in dbm for [ENSG00000197536.11]
WARNING, no entry stored in dbm for [ENSG00000259673.6]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000270696.1]
WARNING, no entry stored in dbm for [ENSG00000243829.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000286675.1]
WARNING, no entry stored in dbm for [ENSG00000233891.8]
WARNING, no entry stored in dbm for [ENSG00000255092.1]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000255991.2]
WARNING, no entry stored in dbm for [ENSG00000234996.4]
WARNING, no entry stored in dbm for [ENSG00000276975.3]
WARNING, no entry stored in dbm for [ENSG00000270231.4]
WARNING, no entry stored in dbm for [ENSG00000232908.3]
WARNING, no entry stored in dbm for [ENSG00000267469.1]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000236832.1]
WARNING, no entry stored in dbm for [ENSG00000231471.1]
WARNING, no entry stored in dbm for [ENSG00000232916.1]
WARNING, no entry stored in dbm for [ENSG00000234705.2]
WARNING, no entry stored in dbm for [ENSG00000234705.2]
WARNING, no entry stored in dbm for [ENSG00000213650.3]
WARNING, no entry stored in dbm for [ENSG00000279460.1]
WARNING, no entry stored in dbm for [ENSG00000196301.3]
WARNING, no entry stored in dbm for [ENSG00000262691.1]
WARNING, no entry stored in dbm for [ENSG00000131002.12]
WARNING, no entry stored in dbm for [ENSG00000259319.1]
WARNING, no entry stored in dbm for [ENSG00000231074.9]
WARNING, no entry stored in dbm for [ENSG00000270604.5]
WARNING, no entry stored in dbm for [ENSG00000272645.3]
WARNING, no entry stored in dbm for [ENSG00000204790.9]
WARNING, no entry stored in dbm for [ENSG00000281649.2]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000218502.3]
WARNING, no entry stored in dbm for [ENSG00000254838.5]
WARNING, no entry stored in dbm for [ENSG00000241549.8]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000251451.1]
WARNING, no entry stored in dbm for [ENSG00000230189.7]
WARNING, no entry stored in dbm for [ENSG00000233910.1]
WARNING, no entry stored in dbm for [ENSG00000285697.1]
WARNING, no entry stored in dbm for [ENSG00000279277.2]
WARNING, no entry stored in dbm for [ENSG00000236675.1]
WARNING, no entry stored in dbm for [ENSG00000261064.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000255769.7]
WARNING, no entry stored in dbm for [ENSG00000241621.1]
WARNING, no entry stored in dbm for [ENSG00000223893.1]
WARNING, no entry stored in dbm for [ENSG00000269540.1]
WARNING, no entry stored in dbm for [ENSG00000226067.7]
WARNING, no entry stored in dbm for [ENSG00000223482.8]
WARNING, no entry stored in dbm for [ENSG00000280248.1]
WARNING, no entry stored in dbm for [ENSG00000160766.14]
WARNING, no entry stored in dbm for [ENSG00000234741.8]
WARNING, no entry stored in dbm for [ENSG00000235587.2]
WARNING, no entry stored in dbm for [ENSG00000285184.3]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000198468.9]
WARNING, no entry stored in dbm for [ENSG00000266258.1]
WARNING, no entry stored in dbm for [ENSG00000259905.7]
WARNING, no entry stored in dbm for [ENSG00000250227.1]
WARNING, no entry stored in dbm for [ENSG00000237729.2]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000231868.1]
WARNING, no entry stored in dbm for [ENSG00000283769.1]
WARNING, no entry stored in dbm for [ENSG00000260565.7]
WARNING, no entry stored in dbm for [ENSG00000215154.6]
WARNING, no entry stored in dbm for [ENSG00000248113.2]
WARNING, no entry stored in dbm for [ENSG00000239920.2]
WARNING, no entry stored in dbm for [ENSG00000234936.1]
WARNING, no entry stored in dbm for [ENSG00000264044.1]
WARNING, no entry stored in dbm for [ENSG00000267257.1]
WARNING, no entry stored in dbm for [ENSG00000257790.1]
WARNING, no entry stored in dbm for [ENSG00000231018.1]
WARNING, no entry stored in dbm for [ENSG00000230406.2]
WARNING, no entry stored in dbm for [ENSG00000206120.11]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [ENSG00000240376.1]
WARNING, no entry stored in dbm for [ENSG00000131002.12]
WARNING, no entry stored in dbm for [ENSG00000243701.7]
WARNING, no entry stored in dbm for [ENSG00000243701.7]
WARNING, no entry stored in dbm for [ENSG00000257222.1]
WARNING, no entry stored in dbm for [ENSG00000186481.16]
WARNING, no entry stored in dbm for [ENSG00000235143.1]
WARNING, no entry stored in dbm for [ENSG00000173209.23]
WARNING, no entry stored in dbm for [ENSG00000235519.3]
WARNING, no entry stored in dbm for [ENSG00000276744.1]
WARNING, no entry stored in dbm for [ENSG00000233342.2]
WARNING, no entry stored in dbm for [ENSG00000229738.1]
WARNING, no entry stored in dbm for [ENSG00000237491.10]
WARNING, no entry stored in dbm for [ENSG00000279249.3]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000232824.1]
WARNING, no entry stored in dbm for [ENSG00000226950.8]
WARNING, no entry stored in dbm for [ENSG00000226950.8]
WARNING, no entry stored in dbm for [ENSG00000230409.3]
WARNING, no entry stored in dbm for [ENSG00000286458.1]
WARNING, no entry stored in dbm for [ENSG00000286624.1]
WARNING, no entry stored in dbm for [ENSG00000247151.7]
WARNING, no entry stored in dbm for [ENSG00000249684.6]
WARNING, no entry stored in dbm for [ENSG00000226703.1]
WARNING, no entry stored in dbm for [ENSG00000270533.2]
WARNING, no entry stored in dbm for [ENSG00000270231.4]
WARNING, no entry stored in dbm for [ENSG00000278932.4]
WARNING, no entry stored in dbm for [ENSG00000278931.1]
WARNING, no entry stored in dbm for [ENSG00000230223.8]
WARNING, no entry stored in dbm for [ENSG00000286761.1]
WARNING, no entry stored in dbm for [ENSG00000228768.3]
WARNING, no entry stored in dbm for [ENSG00000181984.11]
WARNING, no entry stored in dbm for [ENSG00000286694.1]
WARNING, no entry stored in dbm for [ENSG00000236088.10]
WARNING, no entry stored in dbm for [ENSG00000235172.8]
WARNING, no entry stored in dbm for [ENSG00000200156.1]
WARNING, no entry stored in dbm for [ENSG00000199568.1]
WARNING, no entry stored in dbm for [ENSG00000249237.5]
WARNING, no entry stored in dbm for [ENSG00000285755.2]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000215424.10]
WARNING, no entry stored in dbm for [ENSG00000260896.6]
WARNING, no entry stored in dbm for [ENSG00000260896.6]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000236675.1]
WARNING, no entry stored in dbm for [ENSG00000224172.1]
WARNING, no entry stored in dbm for [ENSG00000226232.8]
WARNING, no entry stored in dbm for [ENSG00000253204.1]
WARNING, no entry stored in dbm for [ENSG00000239572.3]
WARNING, no entry stored in dbm for [ENSG00000285972.1]
WARNING, no entry stored in dbm for [ENSG00000285972.1]
WARNING, no entry stored in dbm for [ENSG00000223482.8]
WARNING, no entry stored in dbm for [ENSG00000287845.1]
WARNING, no entry stored in dbm for [ENSG00000286277.1]
WARNING, no entry stored in dbm for [ENSG00000247556.6]
WARNING, no entry stored in dbm for [ENSG00000286951.1]
WARNING, no entry stored in dbm for [ENSG00000258938.1]
WARNING, no entry stored in dbm for [ENSG00000287126.1]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000235574.1]
WARNING, no entry stored in dbm for [ENSG00000232004.1]
WARNING, no entry stored in dbm for [ENSG00000265401.1]
WARNING, no entry stored in dbm for [ENSG00000248441.7]
WARNING, no entry stored in dbm for [ENSG00000227742.2]
WARNING, no entry stored in dbm for [ENSG00000261526.2]
WARNING, no entry stored in dbm for [ENSG00000178722.13]
WARNING, no entry stored in dbm for [ENSG00000188511.12]
WARNING, no entry stored in dbm for [ENSG00000224888.4]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000226397.8]
WARNING, no entry stored in dbm for [ENSG00000230131.6]
WARNING, no entry stored in dbm for [ENSG00000232260.2]
WARNING, no entry stored in dbm for [ENSG00000203414.2]
WARNING, no entry stored in dbm for [ENSG00000229106.1]
WARNING, no entry stored in dbm for [ENSG00000197023.6]
WARNING, no entry stored in dbm for [ENSG00000229106.1]
WARNING, no entry stored in dbm for [ENSG00000250442.1]
WARNING, no entry stored in dbm for [ENSG00000220771.2]
WARNING, no entry stored in dbm for [ENSG00000284607.1]
WARNING, no entry stored in dbm for [ENSG00000249993.1]
WARNING, no entry stored in dbm for [ENSG00000279022.1]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000254560.6]
WARNING, no entry stored in dbm for [ENSG00000182796.14]
WARNING, no entry stored in dbm for [ENSG00000279080.1]
WARNING, no entry stored in dbm for [ENSG00000187172.15]
WARNING, no entry stored in dbm for [ENSG00000235430.1]
WARNING, no entry stored in dbm for [ENSG00000232732.11]
WARNING, no entry stored in dbm for [ENSG00000255545.8]
WARNING, no entry stored in dbm for [ENSG00000226510.1]
WARNING, no entry stored in dbm for [ENSG00000231898.9]
WARNING, no entry stored in dbm for [ENSG00000254897.1]
WARNING, no entry stored in dbm for [ENSG00000242553.1]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000222042.2]
WARNING, no entry stored in dbm for [ENSG00000185433.10]
WARNING, no entry stored in dbm for [ENSG00000286517.1]
WARNING, no entry stored in dbm for [ENSG00000275598.1]
WARNING, no entry stored in dbm for [ENSG00000254681.6]
WARNING, no entry stored in dbm for [ENSG00000253706.5]
WARNING, no entry stored in dbm for [ENSG00000215067.10]
WARNING, no entry stored in dbm for [ENSG00000236274.1]
WARNING, no entry stored in dbm for [ENSG00000270094.1]
WARNING, no entry stored in dbm for [ENSG00000230021.10]
WARNING, no entry stored in dbm for [ENSG00000229422.2]
WARNING, no entry stored in dbm for [ENSG00000234997.2]
WARNING, no entry stored in dbm for [ENSG00000170161.7]
WARNING, no entry stored in dbm for [ENSG00000231212.1]
WARNING, no entry stored in dbm for [ENSG00000228530.1]
WARNING, no entry stored in dbm for [ENSG00000285803.1]
WARNING, no entry stored in dbm for [ENSG00000227619.3]
WARNING, no entry stored in dbm for [ENSG00000258561.2]
WARNING, no entry stored in dbm for [ENSG00000282772.1]
WARNING, no entry stored in dbm for [ENSG00000279124.1]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000230533.4]
WARNING, no entry stored in dbm for [ENSG00000217786.1]
WARNING, no entry stored in dbm for [ENSG00000286782.1]
WARNING, no entry stored in dbm for [ENSG00000268509.2]
WARNING, no entry stored in dbm for [ENSG00000233668.1]
WARNING, no entry stored in dbm for [ENSG00000236924.1]
WARNING, no entry stored in dbm for [ENSG00000285269.2]
WARNING, no entry stored in dbm for [ENSG00000258656.1]
WARNING, no entry stored in dbm for [ENSG00000197670.6]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000283773.1]
WARNING, no entry stored in dbm for [ENSG00000279057.1]
WARNING, no entry stored in dbm for [ENSG00000283773.1]
WARNING, no entry stored in dbm for [ENSG00000250685.7]
WARNING, no entry stored in dbm for [ENSG00000286257.2]
WARNING, no entry stored in dbm for [ENSG00000272866.1]
WARNING, no entry stored in dbm for [ENSG00000233415.1]
WARNING, no entry stored in dbm for [ENSG00000244733.5]
WARNING, no entry stored in dbm for [ENSG00000225012.5]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000258526.7]
WARNING, no entry stored in dbm for [ENSG00000274760.1]
WARNING, no entry stored in dbm for [ENSG00000274760.1]
WARNING, no entry stored in dbm for [ENSG00000231769.3]
WARNING, no entry stored in dbm for [ENSG00000271746.1]
WARNING, no entry stored in dbm for [ENSG00000240143.1]
WARNING, no entry stored in dbm for [ENSG00000285646.2]
WARNING, no entry stored in dbm for [ENSG00000285646.2]
WARNING, no entry stored in dbm for [ENSG00000272540.1]
WARNING, no entry stored in dbm for [ENSG00000235257.9]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000231713.2]
WARNING, no entry stored in dbm for [ENSG00000259456.4]
WARNING, no entry stored in dbm for [ENSG00000224411.3]
WARNING, no entry stored in dbm for [ENSG00000241473.1]
WARNING, no entry stored in dbm for [ENSG00000229349.2]
WARNING, no entry stored in dbm for [ENSG00000226642.1]
WARNING, no entry stored in dbm for [ENSG00000229800.1]
WARNING, no entry stored in dbm for [ENSG00000279382.1]
WARNING, no entry stored in dbm for [ENSG00000287979.1]
WARNING, no entry stored in dbm for [ENSG00000285062.1]
WARNING, no entry stored in dbm for [ENSG00000275140.1]
WARNING, no entry stored in dbm for [ENSG00000275557.1]
WARNING, no entry stored in dbm for [ENSG00000275557.1]
WARNING, no entry stored in dbm for [ENSG00000228922.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000231536.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000261273.1]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000255328.1]
WARNING, no entry stored in dbm for [ENSG00000255328.1]
WARNING, no entry stored in dbm for [ENSG00000226268.3]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000280193.1]
WARNING, no entry stored in dbm for [ENSG00000287378.1]
WARNING, no entry stored in dbm for [ENSG00000283345.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000261924.1]
WARNING, no entry stored in dbm for [ENSG00000285668.1]
WARNING, no entry stored in dbm for [ENSG00000268081.1]
WARNING, no entry stored in dbm for [ENSG00000215246.5]
WARNING, no entry stored in dbm for [ENSG00000287879.1]
WARNING, no entry stored in dbm for [ENSG00000286074.1]
WARNING, no entry stored in dbm for [ENSG00000234791.1]
WARNING, no entry stored in dbm for [ENSG00000260303.1]
WARNING, no entry stored in dbm for [ENSG00000287083.1]
WARNING, no entry stored in dbm for [ENSG00000250421.5]
WARNING, no entry stored in dbm for [ENSG00000250159.7]
WARNING, no entry stored in dbm for [ENSG00000259867.6]
WARNING, no entry stored in dbm for [ENSG00000250149.2]
WARNING, no entry stored in dbm for [ENSG00000254006.5]
WARNING, no entry stored in dbm for [ENSG00000260403.1]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000273230.1]
WARNING, no entry stored in dbm for [ENSG00000241593.5]
WARNING, no entry stored in dbm for [ENSG00000225588.2]
WARNING, no entry stored in dbm for [ENSG00000100058.12]
WARNING, no entry stored in dbm for [ENSG00000248736.3]
WARNING, no entry stored in dbm for [ENSG00000260091.1]
WARNING, no entry stored in dbm for [ENSG00000281490.1]
WARNING, no entry stored in dbm for [ENSG00000280402.1]
WARNING, no entry stored in dbm for [ENSG00000264739.1]
WARNING, no entry stored in dbm for [ENSG00000243176.6]
WARNING, no entry stored in dbm for [ENSG00000259674.1]
WARNING, no entry stored in dbm for [ENSG00000284687.1]
WARNING, no entry stored in dbm for [ENSG00000284605.1]
WARNING, no entry stored in dbm for [ENSG00000284428.1]
WARNING, no entry stored in dbm for [ENSG00000267053.8]
WARNING, no entry stored in dbm for [ENSG00000268362.6]
WARNING, no entry stored in dbm for [ENSG00000268362.6]
WARNING, no entry stored in dbm for [ENSG00000260417.1]
WARNING, no entry stored in dbm for [ENSG00000288633.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000284783.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000259363.6]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000213280.2]
WARNING, no entry stored in dbm for [ENSG00000267408.1]
WARNING, no entry stored in dbm for [ENSG00000263244.2]
WARNING, no entry stored in dbm for [ENSG00000255583.2]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000287022.1]
WARNING, no entry stored in dbm for [ENSG00000284707.2]
WARNING, no entry stored in dbm for [ENSG00000279176.1]
WARNING, no entry stored in dbm for [ENSG00000248694.1]
WARNING, no entry stored in dbm for [ENSG00000285679.2]
WARNING, no entry stored in dbm for [ENSG00000246528.3]
WARNING, no entry stored in dbm for [ENSG00000225205.5]
WARNING, no entry stored in dbm for [ENSG00000259605.3]
WARNING, no entry stored in dbm for [ENSG00000283303.1]
WARNING, no entry stored in dbm for [ENSG00000258716.1]
WARNING, no entry stored in dbm for [ENSG00000231359.3]
WARNING, no entry stored in dbm for [ENSG00000213942.3]
WARNING, no entry stored in dbm for [ENSG00000279605.1]
WARNING, no entry stored in dbm for [ENSG00000267058.1]
WARNING, no entry stored in dbm for [ENSG00000253829.1]
WARNING, no entry stored in dbm for [ENSG00000272631.1]
WARNING, no entry stored in dbm for [ENSG00000280331.1]
WARNING, no entry stored in dbm for [ENSG00000266365.1]
WARNING, no entry stored in dbm for [ENSG00000259025.1]
WARNING, no entry stored in dbm for [ENSG00000261386.2]
WARNING, no entry stored in dbm for [ENSG00000261386.2]
WARNING, no entry stored in dbm for [ENSG00000267040.6]
WARNING, no entry stored in dbm for [ENSG00000257817.2]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000261273.1]
WARNING, no entry stored in dbm for [ENSG00000245904.4]
WARNING, no entry stored in dbm for [ENSG00000259327.1]
WARNING, no entry stored in dbm for [ENSG00000259583.3]
WARNING, no entry stored in dbm for [ENSG00000247934.4]
WARNING, no entry stored in dbm for [ENSG00000260276.2]
WARNING, no entry stored in dbm for [ENSG00000267169.2]
WARNING, no entry stored in dbm for [ENSG00000279649.1]
WARNING, no entry stored in dbm for [ENSG00000242858.1]
WARNING, no entry stored in dbm for [ENSG00000251161.4]
WARNING, no entry stored in dbm for [ENSG00000229852.4]
WARNING, no entry stored in dbm for [ENSG00000213963.6]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000267605.7]
WARNING, no entry stored in dbm for [ENSG00000270231.4]
WARNING, no entry stored in dbm for [ENSG00000267605.7]
WARNING, no entry stored in dbm for [ENSG00000270231.4]
WARNING, no entry stored in dbm for [ENSG00000258454.1]
WARNING, no entry stored in dbm for [ENSG00000286030.2]
WARNING, no entry stored in dbm for [ENSG00000286030.2]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000260103.2]
WARNING, no entry stored in dbm for [ENSG00000222017.1]
WARNING, no entry stored in dbm for [ENSG00000222017.1]
WARNING, no entry stored in dbm for [ENSG00000253706.5]
WARNING, no entry stored in dbm for [ENSG00000250956.1]
WARNING, no entry stored in dbm for [ENSG00000270804.1]
WARNING, no entry stored in dbm for [ENSG00000235253.1]
WARNING, no entry stored in dbm for [ENSG00000229738.1]
WARNING, no entry stored in dbm for [ENSG00000250608.2]
WARNING, no entry stored in dbm for [ENSG00000216895.9]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000286797.1]
WARNING, no entry stored in dbm for [ENSG00000286797.1]
WARNING, no entry stored in dbm for [ENSG00000234352.9]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000260905.1]
WARNING, no entry stored in dbm for [ENSG00000267751.5]
WARNING, no entry stored in dbm for [ENSG00000254170.1]
WARNING, no entry stored in dbm for [ENSG00000237875.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000272911.1]
WARNING, no entry stored in dbm for [ENSG00000213414.3]
WARNING, no entry stored in dbm for [ENSG00000249637.2]
WARNING, no entry stored in dbm for [ENSG00000257261.6]
WARNING, no entry stored in dbm for [ENSG00000274723.1]
WARNING, no entry stored in dbm for [ENSG00000267009.6]
WARNING, no entry stored in dbm for [ENSG00000283648.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000284052.1]
WARNING, no entry stored in dbm for [ENSG00000267191.2]
WARNING, no entry stored in dbm for [ENSG00000269968.1]
WARNING, no entry stored in dbm for [ENSG00000230084.6]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000233006.8]
WARNING, no entry stored in dbm for [ENSG00000230825.2]
WARNING, no entry stored in dbm for [ENSG00000243004.6]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000284523.2]
WARNING, no entry stored in dbm for [ENSG00000228204.2]
WARNING, no entry stored in dbm for [ENSG00000280054.1]
WARNING, no entry stored in dbm for [ENSG00000279159.1]
WARNING, no entry stored in dbm for [ENSG00000267698.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000244307.3]
WARNING, no entry stored in dbm for [ENSG00000240869.3]


	* STAR-Fusion complete.  See output: /tmp/nxf.Yy4zpyB0U9/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)