AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 165
Pass (FILTER=PASS): 10 (6.1%)
Fail (FILTER=FAIL): 155 (93.9%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 36
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 24
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 20
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 10
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 10
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 10
confidence_below_min(low<high): 5
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(low<high);total_reads_below_min(3.0<8.0);aih_curated_blacklist: 2
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 2
total_reads_below_min(7.0<8.0): 1
Breakdown by confidence:
high: 10 pass, 3 fail (total: 13)
low: 0 pass, 67 fail (total: 67)
medium: 0 pass, 85 fail (total: 85)
Arriba filter: 165 rows -> 10 PASS; wrote tih_rna_sample_00407_23H5VFLT4_s33.arriba.fusions.filtered.tsv and tih_rna_sample_00407_23H5VFLT4_s33.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00407_23H5VFLT4_s33.arriba.fusions.filter_summary.txt