-ctat genome lib [/tmp/nxf.AkzD6AYLen/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.AkzD6AYLen/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary -sample contains 232293608 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.AkzD6AYLen/ctat_genome_lib_build_dir -J /tmp/nxf.AkzD6AYLen/tih_rna_sample_00425_23H5VFLT4_s46.Chimeric.out.junction -O /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.AkzD6AYLen/tih_rna_sample_00425_23H5VFLT4_s46.Chimeric.out.junction -building interval tree based on /tmp/nxf.AkzD6AYLen/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=60000.00/min [20000], rate=63157.89/min [30000], rate=64285.71/min [40000], rate=64864.86/min [50000], rate=66666.67/min [60000], rate=66666.67/min [70000], rate=66666.67/min [80000], rate=66666.67/min [90000], rate=67500.00/min [100000], rate=68181.82/min [110000], rate=69473.68/min [120000], rate=70588.24/min [130000], rate=72897.20/min [140000], rate=74336.28/min [150000], rate=75630.25/min [160000], rate=76800.00/min [170000], rate=77272.73/min [180000], rate=78260.87/min [190000], rate=79720.28/min [200000], rate=81081.08/min [210000], rate=81818.18/min [220000], rate=83544.30/min [230000], rate=85714.29/min [240000], rate=87272.73/min [250000], rate=89285.71/min [260000], rate=88636.36/min [270000], rate=86631.02/min [280000], rate=85279.19/min [290000], rate=82857.14/min [300000], rate=80357.14/min [310000], rate=78151.26/min [320000], rate=75294.12/min [330000], rate=73605.95/min [340000], rate=72084.81/min [350000], rate=71428.57/min [360000], rate=70129.87/min [370000], rate=69375.00/min [380000], rate=68468.47/min [390000], rate=67826.09/min [400000], rate=67226.89/min [410000], rate=66486.49/min [420000], rate=66315.79/min [430000], rate=65648.85/min [440000], rate=65024.63/min [450000], rate=65060.24/min [460000], rate=64941.18/min [470000], rate=64383.56/min [480000], rate=63716.81/min [490000], rate=63090.13/min [500000], rate=63025.21/min [510000], rate=62962.96/min [520000], rate=62903.23/min [530000], rate=63095.24/min [540000], rate=62790.70/min [550000], rate=62857.14/min [560000], rate=62569.83/min [570000], rate=62408.76/min [580000], rate=62477.56/min [590000], rate=62544.17/min [600000], rate=62608.70/min [610000], rate=62778.73/min [620000], rate=62944.16/min [630000], rate=63105.18/min [640000], rate=63366.34/min [650000], rate=63621.53/min [660000], rate=63870.97/min [670000], rate=64114.83/min [680000], rate=64353.31/min [690000], rate=64687.50/min [700000], rate=65116.28/min [710000], rate=65538.46/min [720000], rate=66055.05/min [730000], rate=66464.34/min [740000], rate=66867.47/min [750000], rate=67264.57/min [760000], rate=67555.56/min [770000], rate=67941.18/min [780000], rate=68321.17/min [790000], rate=68795.36/min [800000], rate=69264.07/min [810000], rate=69627.51/min [820000], rate=69787.23/min [830000], rate=69747.90/min [840000], rate=69806.09/min [850000], rate=69863.01/min [860000], rate=70013.57/min [870000], rate=70255.72/min [880000], rate=70400.00/min [890000], rate=70728.48/min [900000], rate=71052.63/min [910000], rate=71372.55/min [920000], rate=71595.33/min [930000], rate=71907.22/min [940000], rate=72215.11/min [950000], rate=72519.08/min [960000], rate=72819.22/min [970000], rate=73207.55/min [980000], rate=73591.99/min [990000], rate=73880.60/min [1000000], rate=74165.64/min [1010000], rate=74355.83/min [1020000], rate=74634.15/min [1030000], rate=75000.00/min [1040000], rate=75636.36/min [1050000], rate=76271.19/min [1060000], rate=76718.94/min [1070000], rate=76978.42/min [1080000], rate=77234.80/min [1090000], rate=77764.57/min [1100000], rate=78291.81/min [1110000], rate=78723.40/min [1120000], rate=78965.92/min [1130000], rate=79391.10/min [1140000], rate=79906.54/min [1150000], rate=80325.96/min [1160000], rate=80555.56/min [1170000], rate=80875.58/min [1180000], rate=81099.66/min [1190000], rate=81228.67/min [1200000], rate=81447.96/min [1210000], rate=81573.03/min [1220000], rate=81787.71/min [1230000], rate=82274.25/min [1240000], rate=82574.92/min [1250000], rate=82781.46/min [1260000], rate=83168.32/min [1270000], rate=83736.26/min [1280000], rate=84118.29/min [1290000], rate=84130.43/min [1300000], rate=84324.32/min [1310000], rate=84244.37/min [1320000], rate=84345.05/min [1330000], rate=84533.90/min [1340000], rate=85169.49/min [1350000], rate=85714.29/min [1360000], rate=86257.93/min [1370000], rate=86800.42/min [1380000], rate=86974.79/min [1390000], rate=87056.37/min [1400000], rate=87500.00/min [1410000], rate=87941.79/min [1420000], rate=88381.74/min [1430000], rate=88453.61/min [1440000], rate=88706.37/min [1450000], rate=88957.06/min [1460000], rate=89205.70/min [1470000], rate=89271.26/min [1480000], rate=89516.13/min [1490000], rate=90030.21/min [1500000], rate=90543.26/min [1510000], rate=90690.69/min [1520000], rate=90566.04/min [1530000], rate=90621.92/min [1540000], rate=90766.21/min [1550000], rate=90820.31/min [1560000], rate=91139.24/min [1570000], rate=91545.19/min [1580000], rate=91594.20/min [1590000], rate=91730.77/min [1600000], rate=91690.54/min [1610000], rate=91650.85/min [1620000], rate=92045.45/min [1630000], rate=92351.27/min [1640000], rate=92655.37/min [1650000], rate=92783.51/min [1660000], rate=92910.45/min [1670000], rate=93122.68/min [1680000], rate=93246.99/min [1690000], rate=93370.17/min [1700000], rate=93321.13/min [1710000], rate=93357.60/min [1720000], rate=93563.01/min [1730000], rate=93682.31/min [1740000], rate=93800.54/min [1750000], rate=93917.71/min [1760000], rate=94033.84/min [1770000], rate=94316.16/min [1780000], rate=94513.27/min [1790000], rate=94708.99/min [1800000], rate=94653.81/min [1810000], rate=94599.30/min [1820000], rate=94627.38/min [1830000], rate=94573.64/min [1840000], rate=94520.55/min [1850000], rate=94548.55/min [1860000], rate=94656.49/min [1870000], rate=94683.54/min [1880000], rate=94710.33/min [1890000], rate=94816.05/min [1900000], rate=94841.93/min [1910000], rate=94946.15/min [1920000], rate=94971.15/min [1930000], rate=95073.89/min [1940000], rate=95175.80/min [1950000], rate=95276.87/min [1960000], rate=95377.13/min [1970000], rate=95476.58/min [1980000], rate=95345.10/min [1990000], rate=94837.17/min [2000000], rate=94339.62/min [2010000], rate=93852.14/min [2020000], rate=93446.41/min [2030000], rate=92977.10/min [2040000], rate=92657.08/min [2050000], rate=92203.90/min [2060000], rate=91895.91/min [2070000], rate=91592.92/min [2080000], rate=91228.07/min [2090000], rate=90935.46/min [2100000], rate=90582.31/min [2110000], rate=90235.21/min [2120000], rate=89957.57/min [2130000], rate=89747.19/min [2140000], rate=89539.75/min [2150000], rate=89335.18/min [2160000], rate=89194.77/min [2170000], rate=88995.22/min [2180000], rate=88858.70/min [2190000], rate=88783.78/min [2200000], rate=88769.33/min [2210000], rate=88636.36/min [2220000], rate=88504.98/min [2230000], rate=88375.17/min [2240000], rate=88073.39/min [2250000], rate=88005.22/min [2260000], rate=87880.75/min [2270000], rate=87757.73/min [2280000], rate=87692.31/min [2290000], rate=87683.47/min [2300000], rate=87674.71/min [2310000], rate=87721.52/min [2320000], rate=87767.97/min [2330000], rate=87814.07/min [2340000], rate=87914.84/min -building interval tree based on /tmp/nxf.AkzD6AYLen/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=120000.00/min [20000], rate=120000.00/min [30000], rate=120000.00/min [40000], rate=109090.91/min [50000], rate=93750.00/min [60000], rate=87804.88/min [70000], rate=84000.00/min [80000], rate=78688.52/min [90000], rate=77142.86/min [100000], rate=75949.37/min [110000], rate=75000.00/min [120000], rate=74226.80/min [130000], rate=74285.71/min [140000], rate=74336.28/min [150000], rate=74380.17/min [160000], rate=74418.60/min [170000], rate=74452.55/min [180000], rate=75000.00/min [190000], rate=75496.69/min [200000], rate=76433.12/min [210000], rate=77300.61/min [220000], rate=78571.43/min [230000], rate=79768.79/min [240000], rate=80446.93/min [250000], rate=81521.74/min [260000], rate=82105.26/min [270000], rate=83076.92/min [280000], rate=84000.00/min [290000], rate=84878.05/min [300000], rate=83720.93/min [310000], rate=82666.67/min [320000], rate=80672.27/min [330000], rate=79200.00/min [340000], rate=78764.48/min [350000], rate=77777.78/min [360000], rate=77419.35/min [370000], rate=76816.61/min [380000], rate=76254.18/min [390000], rate=75728.16/min [400000], rate=75471.70/min [410000], rate=75460.12/min [420000], rate=75223.88/min [430000], rate=75218.66/min [440000], rate=74787.54/min [450000], rate=74792.24/min [460000], rate=74796.75/min [470000], rate=74406.33/min [480000], rate=74035.99/min [490000], rate=73869.35/min [500000], rate=74074.07/min [510000], rate=74092.01/min [520000], rate=74109.26/min [530000], rate=74473.07/min [540000], rate=74654.38/min [550000], rate=75000.00/min [560000], rate=75675.68/min [570000], rate=75831.49/min [580000], rate=76315.79/min [590000], rate=76789.59/min [600000], rate=77087.79/min [610000], rate=77542.37/min [620000], rate=77987.42/min [630000], rate=78423.24/min [640000], rate=78850.10/min [650000], rate=79268.29/min [660000], rate=79838.71/min [670000], rate=80079.68/min [680000], rate=79223.30/min [690000], rate=78857.14/min [700000], rate=78504.67/min [710000], rate=78165.14/min [720000], rate=77837.84/min [730000], rate=77522.12/min [740000], rate=77083.33/min [750000], rate=76791.81/min [760000], rate=76510.07/min [770000], rate=76237.62/min [780000], rate=76097.56/min [790000], rate=75961.54/min [800000], rate=75829.38/min [810000], rate=75700.93/min [820000], rate=75692.31/min [830000], rate=75683.89/min [840000], rate=75675.68/min [850000], rate=75780.09/min [860000], rate=75770.93/min [870000], rate=75761.97/min [880000], rate=75753.23/min [890000], rate=75960.17/min [900000], rate=76056.34/min [910000], rate=76363.64/min [920000], rate=76773.30/min [930000], rate=76859.50/min [940000], rate=77154.58/min [950000], rate=77445.65/min [960000], rate=77732.79/min [970000], rate=78016.09/min [980000], rate=78400.00/min [990000], rate=78675.50/min [1000000], rate=79051.38/min [1010000], rate=79423.33/min [1020000], rate=79069.77/min [1030000], rate=78726.11/min [1040000], rate=78391.96/min [1050000], rate=78066.91/min [1060000], rate=77750.61/min [1070000], rate=77536.23/min [1080000], rate=77326.97/min [1090000], rate=77122.64/min [1100000], rate=76923.08/min [1110000], rate=76905.31/min [1120000], rate=76624.86/min [1130000], rate=76523.70/min [1140000], rate=76510.07/min [1150000], rate=76411.96/min [1160000], rate=76399.56/min [1170000], rate=76304.35/min [1180000], rate=76129.03/min [1190000], rate=76038.34/min [1200000], rate=76109.94/min [1210000], rate=76100.63/min [1220000], rate=76091.48/min [1230000], rate=75847.89/min [1240000], rate=75532.99/min [1250000], rate=75075.08/min [1260000], rate=75074.48/min [1270000], rate=75222.11/min [1280000], rate=75368.01/min [1290000], rate=75512.20/min [1300000], rate=75654.70/min [1310000], rate=75795.56/min [1320000], rate=75934.80/min [1330000], rate=76000.00/min [1340000], rate=76064.33/min [1350000], rate=76199.44/min [1360000], rate=76261.68/min [1370000], rate=76465.12/min [1380000], rate=76666.67/min [1390000], rate=76795.58/min [1400000], rate=77134.99/min [1410000], rate=77401.65/min [1420000], rate=77595.63/min [1430000], rate=77787.85/min [1440000], rate=77978.34/min [1450000], rate=77887.20/min [1460000], rate=77797.51/min [1470000], rate=77640.85/min [1480000], rate=77554.59/min [1490000], rate=77402.60/min [1500000], rate=77319.59/min [1510000], rate=77237.85/min [1520000], rate=77157.36/min [1530000], rate=77142.86/min [1540000], rate=77128.55/min [1550000], rate=76923.08/min [1560000], rate=76973.68/min [1570000], rate=76960.78/min [1580000], rate=77073.17/min [1590000], rate=77122.07/min [1600000], rate=77170.42/min [1610000], rate=77280.00/min [1620000], rate=77450.20/min [1630000], rate=77619.05/min [1640000], rate=77725.12/min [1650000], rate=77830.19/min [1660000], rate=77995.30/min [1670000], rate=78159.13/min [1680000], rate=78321.68/min [1690000], rate=78604.65/min [1700000], rate=78886.31/min [1710000], rate=79227.80/min [1720000], rate=79445.73/min [1730000], rate=79662.32/min [1740000], rate=79816.51/min [1750000], rate=80030.49/min [1760000], rate=80000.00/min [1770000], rate=79849.62/min [1780000], rate=79701.49/min [1790000], rate=79555.56/min [1800000], rate=79470.20/min [1810000], rate=79327.98/min [1820000], rate=79245.28/min [1830000], rate=79163.66/min [1840000], rate=79196.56/min [1850000], rate=79229.12/min [1860000], rate=79261.36/min [1870000], rate=79237.29/min [1880000], rate=79269.15/min [1890000], rate=79300.70/min [1900000], rate=79387.19/min [1910000], rate=79472.95/min [1920000], rate=79503.11/min [1930000], rate=79587.63/min [1940000], rate=79726.03/min [1950000], rate=79809.00/min [1960000], rate=79945.62/min [1970000], rate=80027.08/min [1980000], rate=80161.94/min [1990000], rate=80404.04/min [2000000], rate=80536.91/min [2010000], rate=80668.90/min [2020000], rate=80800.00/min [2030000], rate=80930.23/min [2040000], rate=81059.60/min [2050000], rate=81134.56/min [2060000], rate=81315.79/min [2070000], rate=81496.06/min [2080000], rate=81675.39/min [2090000], rate=81587.51/min [2100000], rate=81290.32/min [2110000], rate=81101.86/min [2120000], rate=80967.54/min [2130000], rate=80886.08/min [2140000], rate=80805.54/min [2150000], rate=80827.07/min [2160000], rate=80747.66/min [2170000], rate=80569.31/min [2180000], rate=80442.80/min [2190000], rate=80317.85/min [2200000], rate=80291.97/min [2210000], rate=80072.46/min [2220000], rate=79856.12/min [2230000], rate=79832.94/min [2240000], rate=79857.40/min [2250000], rate=79928.95/min [2260000], rate=79952.83/min [2270000], rate=80023.50/min [2280000], rate=80093.68/min [2290000], rate=80210.16/min [2300000], rate=80325.96/min [2310000], rate=80441.09/min [2320000], rate=80555.56/min [2330000], rate=80622.84/min -building interval tree based on /tmp/nxf.AkzD6AYLen/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=150000.00/min [20000], rate=133333.33/min [30000], rate=138461.54/min [40000], rate=133333.33/min [50000], rate=142857.14/min [60000], rate=156521.74/min [70000], rate=161538.46/min [80000], rate=160000.00/min [90000], rate=154285.71/min [100000], rate=146341.46/min [110000], rate=153488.37/min [120000], rate=160000.00/min [130000], rate=165957.45/min [140000], rate=171428.57/min [150000], rate=169811.32/min [160000], rate=168421.05/min [170000], rate=178947.37/min [180000], rate=186206.90/min [190000], rate=183870.97/min [200000], rate=179104.48/min [210000], rate=177464.79/min [220000], rate=173684.21/min [230000], rate=168292.68/min [240000], rate=171428.57/min [250000], rate=174418.60/min [260000], rate=173333.33/min [270000], rate=172340.43/min [280000], rate=168000.00/min [290000], rate=164150.94/min [300000], rate=168224.30/min [310000], rate=169090.91/min [320000], rate=171428.57/min [330000], rate=170689.66/min [340000], rate=171428.57/min [350000], rate=175000.00/min [360000], rate=180000.00/min [370000], rate=179032.26/min [380000], rate=176744.19/min [390000], rate=174626.87/min [400000], rate=171428.57/min [410000], rate=169655.17/min [420000], rate=168000.00/min [430000], rate=168627.45/min [440000], rate=171428.57/min [450000], rate=170886.08/min [460000], rate=170370.37/min [470000], rate=169879.52/min [480000], rate=167441.86/min [490000], rate=163333.33/min [500000], rate=165745.86/min [510000], rate=167213.11/min [520000], rate=168648.65/min [530000], rate=169148.94/min [540000], rate=168750.00/min [550000], rate=170103.09/min [560000], rate=170558.38/min [570000], rate=169306.93/min [580000], rate=168115.94/min [590000], rate=166981.13/min [600000], rate=166666.67/min [610000], rate=165610.86/min [620000], rate=166816.14/min [630000], rate=168000.00/min [640000], rate=166956.52/min [650000], rate=165957.45/min [660000], rate=165000.00/min [670000], rate=162753.04/min [680000], rate=161904.76/min [690000], rate=162992.13/min [700000], rate=164062.50/min [710000], rate=164478.76/min [720000], rate=164885.50/min [730000], rate=165909.09/min [740000], rate=164444.44/min [750000], rate=157342.66/min [760000], rate=149508.20/min [770000], rate=143034.06/min [780000], rate=137647.06/min [790000], rate=132773.11/min [800000], rate=128686.33/min [810000], rate=124615.38/min [820000], rate=121481.48/min [830000], rate=117730.50/min [840000], rate=114806.38/min [850000], rate=112334.80/min [860000], rate=109554.14/min [870000], rate=107407.41/min [880000], rate=105389.22/min [890000], rate=102692.31/min [900000], rate=100934.58/min [910000], rate=98378.38/min [920000], rate=96842.11/min [930000], rate=95384.62/min [940000], rate=94156.93/min [950000], rate=92833.88/min [960000], rate=91719.75/min [970000], rate=90654.21/min [980000], rate=89361.70/min [990000], rate=88392.86/min [1000000], rate=87591.24/min [1010000], rate=86819.48/min [1020000], rate=86197.18/min [1030000], rate=85595.57/min [1040000], rate=85013.62/min [1050000], rate=84450.40/min [1060000], rate=83905.01/min [1070000], rate=83485.05/min [1080000], rate=82970.55/min [1090000], rate=82575.76/min [1100000], rate=82294.26/min [1110000], rate=82019.70/min [1120000], rate=81652.49/min [1130000], rate=81392.56/min [1140000], rate=81235.15/min [1150000], rate=80890.97/min [1160000], rate=80648.90/min [1170000], rate=80412.37/min [1180000], rate=80181.20/min [1190000], rate=79865.77/min [1200000], rate=79646.02/min [1210000], rate=79431.07/min [1220000], rate=79220.78/min [1230000], rate=78846.15/min [1240000], rate=78563.89/min [1250000], rate=78369.91/min [1260000], rate=78018.58/min [1270000], rate=77675.84/min [1280000], rate=77497.48/min [1290000], rate=77400.00/min [1300000], rate=77304.26/min [1310000], rate=77210.22/min [1320000], rate=77192.98/min [1330000], rate=77176.02/min [1340000], rate=77159.31/min [1350000], rate=77142.86/min [1360000], rate=77126.65/min [1370000], rate=77110.69/min [1380000], rate=77094.97/min [1390000], rate=77222.22/min [1400000], rate=77276.91/min [1410000], rate=77330.90/min [1420000], rate=77454.55/min [1430000], rate=77576.85/min [1440000], rate=77697.84/min [1450000], rate=77817.53/min [1460000], rate=77935.94/min [1470000], rate=78122.23/min [1480000], rate=78306.88/min [1490000], rate=78489.90/min [1500000], rate=78602.62/min [1510000], rate=78782.61/min [1520000], rate=78961.04/min [1530000], rate=79206.21/min [1540000], rate=79381.44/min [1550000], rate=79216.35/min [1560000], rate=79054.05/min [1570000], rate=78960.60/min [1580000], rate=78802.99/min [1590000], rate=78712.87/min [1600000], rate=78688.52/min [1610000], rate=78600.49/min [1620000], rate=78513.73/min [1630000], rate=78365.38/min [1640000], rate=78219.40/min [1650000], rate=78199.05/min [1660000], rate=78178.96/min [1670000], rate=78159.13/min [1680000], rate=78200.16/min [1690000], rate=78301.16/min [1700000], rate=78341.01/min [1710000], rate=78380.44/min [1720000], rate=78419.45/min [1730000], rate=78458.05/min [1740000], rate=78437.27/min [1750000], rate=78475.34/min [1760000], rate=78513.01/min [1770000], rate=78608.44/min [1780000], rate=78761.06/min [1790000], rate=78854.63/min [1800000], rate=79005.12/min [1810000], rate=79096.87/min [1820000], rate=79187.82/min [1830000], rate=79335.26/min [1840000], rate=79424.46/min [1850000], rate=79569.89/min [1860000], rate=79714.29/min [1870000], rate=79800.85/min [1880000], rate=79943.30/min [1890000], rate=80141.34/min [1900000], rate=80281.69/min [1910000], rate=80477.53/min [1920000], rate=80672.27/min [1930000], rate=80416.67/min [1940000], rate=80110.12/min [1950000], rate=79754.60/min [1960000], rate=79620.85/min [1970000], rate=79382.14/min [1980000], rate=79147.24/min [1990000], rate=78811.88/min [2000000], rate=78431.37/min [2010000], rate=78159.43/min [2020000], rate=77892.03/min [2030000], rate=77579.62/min [2040000], rate=77419.35/min [2050000], rate=77261.31/min [2060000], rate=77105.43/min [2070000], rate=76619.37/min [2080000], rate=76237.02/min [2090000], rate=76000.00/min [2100000], rate=75812.27/min [2110000], rate=75763.02/min [2120000], rate=75624.26/min [2130000], rate=75487.30/min [2140000], rate=75440.66/min [2150000], rate=75394.51/min [2160000], rate=75305.06/min [2170000], rate=75260.12/min [2180000], rate=75172.41/min [2190000], rate=75128.64/min [2200000], rate=75128.06/min [2210000], rate=75084.94/min [2220000], rate=75042.25/min [2230000], rate=75042.06/min [2240000], rate=75083.80/min [2250000], rate=75083.43/min [2260000], rate=75083.06/min [2270000], rate=75165.56/min [2280000], rate=75247.52/min [2290000], rate=75370.27/min [2300000], rate=75451.07/min [2310000], rate=75531.34/min [2320000], rate=75447.15/min [2330000], rate=75161.29/min -building interval tree based on /tmp/nxf.AkzD6AYLen/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=50000.00/min [20000], rate=50000.00/min [30000], rate=52941.18/min [40000], rate=54545.45/min [50000], rate=54545.45/min [60000], rate=51428.57/min [70000], rate=52500.00/min [80000], rate=53333.33/min [90000], rate=54545.45/min [100000], rate=55045.87/min [110000], rate=55932.20/min [120000], rate=56250.00/min [130000], rate=56934.31/min [140000], rate=57534.25/min [150000], rate=58064.52/min [160000], rate=58536.59/min [170000], rate=59302.33/min [180000], rate=60000.00/min [190000], rate=60638.30/min [200000], rate=60913.71/min [210000], rate=61764.71/min [220000], rate=62264.15/min [230000], rate=63302.75/min [240000], rate=64285.71/min [250000], rate=65502.18/min [260000], rate=66101.69/min [270000], rate=66122.45/min [280000], rate=66403.16/min [290000], rate=67181.47/min [300000], rate=68702.29/min [310000], rate=69924.81/min [320000], rate=71111.11/min [330000], rate=72000.00/min [340000], rate=72597.86/min [350000], rate=72916.67/min [360000], rate=73469.39/min [370000], rate=74000.00/min [380000], rate=74509.80/min [390000], rate=75000.00/min [400000], rate=75709.78/min [410000], rate=76160.99/min [420000], rate=76829.27/min [430000], rate=77477.48/min [440000], rate=77647.06/min [450000], rate=77809.80/min [460000], rate=78186.97/min [470000], rate=77685.95/min [480000], rate=77419.35/min [490000], rate=77165.35/min [500000], rate=77120.82/min [510000], rate=76884.42/min [520000], rate=76847.29/min [530000], rate=76811.59/min [540000], rate=76959.62/min [550000], rate=76923.08/min [560000], rate=77064.22/min [570000], rate=77200.90/min [580000], rate=77333.33/min [590000], rate=77631.58/min [600000], rate=77922.08/min [610000], rate=78372.59/min [620000], rate=78646.93/min [630000], rate=78914.41/min [640000], rate=79338.84/min [650000], rate=79754.60/min [660000], rate=80161.94/min [670000], rate=80561.12/min [680000], rate=81274.90/min [690000], rate=81818.18/min [700000], rate=81871.35/min [710000], rate=81453.15/min [720000], rate=80747.66/min [730000], rate=80219.78/min [740000], rate=80000.00/min [750000], rate=79787.23/min [760000], rate=79304.35/min [770000], rate=79245.28/min [780000], rate=79322.03/min [790000], rate=79396.98/min [800000], rate=79470.20/min [810000], rate=79541.73/min [820000], rate=79611.65/min [830000], rate=79807.69/min [840000], rate=79873.22/min [850000], rate=79937.30/min [860000], rate=80124.22/min [870000], rate=80431.43/min [880000], rate=80733.94/min [890000], rate=81155.02/min [900000], rate=81694.40/min [910000], rate=81981.98/min [920000], rate=82265.28/min [930000], rate=82544.38/min [940000], rate=81976.74/min [950000], rate=81545.06/min [960000], rate=81012.66/min [970000], rate=80721.22/min [980000], rate=80658.44/min [990000], rate=80270.27/min [1000000], rate=80000.00/min [1010000], rate=79736.84/min [1020000], rate=79480.52/min [1030000], rate=79332.48/min [1040000], rate=79187.82/min [1050000], rate=79046.42/min [1060000], rate=78908.19/min [1070000], rate=78773.01/min [1080000], rate=78640.78/min [1090000], rate=78511.40/min [1100000], rate=78478.00/min [1110000], rate=78445.23/min [1120000], rate=78413.07/min [1130000], rate=78290.99/min [1140000], rate=78260.87/min [1150000], rate=78142.70/min [1160000], rate=78202.25/min [1170000], rate=78260.87/min [1180000], rate=78232.04/min [1190000], rate=78289.47/min [1200000], rate=78175.90/min [1210000], rate=78148.55/min [1220000], rate=77624.60/min [1230000], rate=77439.66/min [1240000], rate=77500.00/min [1250000], rate=77559.46/min [1260000], rate=77300.61/min [1270000], rate=77047.52/min [1280000], rate=76953.91/min [1290000], rate=76861.97/min [1300000], rate=76923.08/min [1310000], rate=77058.82/min [1320000], rate=77117.82/min [1330000], rate=77027.03/min [1340000], rate=77011.49/min [1350000], rate=77069.46/min [1360000], rate=77126.65/min [1370000], rate=77110.69/min [1380000], rate=77094.97/min [1390000], rate=77008.31/min [1400000], rate=76993.58/min [1410000], rate=76979.07/min [1420000], rate=77034.36/min [1430000], rate=77088.95/min [1440000], rate=77211.80/min [1450000], rate=77333.33/min [1460000], rate=77453.58/min [1470000], rate=77572.56/min [1480000], rate=77690.29/min [1490000], rate=77942.46/min [1500000], rate=78125.00/min [1510000], rate=78305.96/min [1520000], rate=78149.10/min [1530000], rate=77664.97/min [1540000], rate=77257.53/min [1550000], rate=76796.04/min [1560000], rate=76470.59/min [1570000], rate=76151.98/min [1580000], rate=75840.00/min [1590000], rate=75594.29/min [1600000], rate=75412.41/min [1610000], rate=75175.10/min [1620000], rate=75000.00/min [1630000], rate=74885.15/min [1640000], rate=74715.26/min [1650000], rate=74604.37/min [1660000], rate=74439.46/min [1670000], rate=74332.34/min [1680000], rate=74281.50/min [1690000], rate=74177.03/min [1700000], rate=74074.07/min [1710000], rate=73972.60/min [1720000], rate=73872.58/min [1730000], rate=73826.46/min [1740000], rate=73780.92/min [1750000], rate=73839.66/min [1760000], rate=73846.15/min [1770000], rate=73903.97/min [1780000], rate=73961.22/min [1790000], rate=73966.94/min [1800000], rate=74124.91/min [1810000], rate=74231.03/min [1820000], rate=74285.71/min [1830000], rate=74339.88/min [1840000], rate=74343.43/min [1850000], rate=74346.95/min [1860000], rate=74300.93/min [1870000], rate=74353.88/min [1880000], rate=74259.38/min [1890000], rate=73972.60/min [1900000], rate=73691.01/min [1910000], rate=73603.08/min [1920000], rate=73610.22/min [1930000], rate=73617.29/min [1940000], rate=73670.89/min [1950000], rate=73724.01/min [1960000], rate=73822.98/min [1970000], rate=73921.20/min [1980000], rate=74018.69/min [1990000], rate=73794.81/min [2000000], rate=73755.38/min [2010000], rate=73671.35/min [2020000], rate=73588.34/min [2030000], rate=73550.72/min [2040000], rate=73690.55/min [2050000], rate=73652.69/min [2060000], rate=73703.04/min [2070000], rate=73709.20/min [2080000], rate=73889.88/min [2090000], rate=73938.68/min [2100000], rate=73987.08/min [2110000], rate=73905.43/min [2120000], rate=73824.72/min [2130000], rate=73787.53/min [2140000], rate=73878.02/min [2150000], rate=73967.89/min [2160000], rate=74099.49/min [2170000], rate=74103.59/min [2180000], rate=73773.27/min [2190000], rate=73531.06/min [2200000], rate=73089.70/min [2210000], rate=72657.53/min [2220000], rate=72430.67/min [2230000], rate=72168.28/min [2240000], rate=71871.66/min [2250000], rate=71542.13/min [2260000], rate=71330.88/min [2270000], rate=71159.87/min [2280000], rate=70844.12/min [2290000], rate=70642.67/min [2300000], rate=70480.08/min [2310000], rate=70319.63/min [2320000], rate=70090.63/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.AkzD6AYLen/ctat_genome_lib_build_dir --filt_file /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 6000000.00 reads per min processed... 6000000.00 reads per min processed... 9000000.00 reads per min processed... 8000000.00 reads per min processed... 7500000.00 reads per min processed... 7200000.00 reads per min processed... 7000000.00 reads per min processed... 6000000.00 reads per min processed... 5400000.00 reads per min processed... 5000000.00 reads per min processed... 4400000.00 reads per min processed... 4235294.12 reads per min processed... 4105263.16 reads per min processed... 4000000.00 reads per min processed... 3913043.48 reads per min processed... 3840000.00 reads per min processed... 3777777.78 reads per min processed... 3724137.93 reads per min processed... 3677419.35 reads per min processed... 3636363.64 reads per min processed... 3600000.00 reads per min processed... 3473684.21 reads per min processed... 3450000.00 reads per min processed... 3428571.43 reads per min processed... 3409090.91 reads per min processed... 3319148.94 reads per min processed... 3306122.45 reads per min processed... 3230769.23 reads per min processed... 3163636.36 reads per min processed... 3157894.74 reads per min processed... 3100000.00 reads per min processed... 3096774.19 reads per min processed... 3093750.00 reads per min processed... 3090909.09 reads per min processed... 3043478.26 reads per min processed... 3042253.52 reads per min processed... 3041095.89 reads per min processed... 3040000.00 reads per min processed... 3038961.04 reads per min processed... 3037974.68 reads per min processed... 3075000.00 reads per min processed... 3111111.11 reads per min processed... 3071428.57 reads per min processed... 3105882.35 reads per min processed... 3103448.28 reads per min processed... 3101123.60 reads per min processed... 3098901.10 reads per min processed... 3130434.78 reads per min processed... 3161290.32 reads per min processed... 3225806.45 reads per min processed... 3255319.15 reads per min processed... 3284210.53 reads per min processed... 3312500.00 reads per min processed... 3306122.45 reads per min processed... 3300000.00 reads per min processed... 3262135.92 reads per min processed... 3257142.86 reads per min processed... 3252336.45 reads per min processed... 3247706.42 reads per min processed... 3243243.24 reads per min processed... 3238938.05 reads per min processed... 3234782.61 reads per min processed... 3230769.23 reads per min processed... 3226890.76 reads per min processed... 3250000.00 reads per min processed... 3245901.64 reads per min processed... 3241935.48 reads per min processed... 3238095.24 reads per min processed... 3234375.00 reads per min processed... 3230769.23 reads per min processed... 3227272.73 reads per min processed... 3223880.60 reads per min processed... 3197080.29 reads per min processed... 3217391.30 reads per min processed... 3191489.36 reads per min processed... 3188811.19 reads per min processed... 3186206.90 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.AkzD6AYLen/tih_rna_sample_00425_23H5VFLT4_s46.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.AkzD6AYLen/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -358884.918254 EM: Round [1] log likelihood: -358691.501816 EM: Round [2] log likelihood: -358614.004328 EM: Round [3] log likelihood: -358575.647530 EM: Round [4] log likelihood: -358554.726126 EM: Round [5] log likelihood: -358542.656771 EM: Round [6] log likelihood: -358535.380726 EM: Round [7] log likelihood: -358530.805196 EM: Round [8] log likelihood: -358527.804573 EM: Round [9] log likelihood: -358525.756226 EM: Round [10] log likelihood: -358524.305948 EM: Round [11] log likelihood: -358523.245736 EM: Round [12] log likelihood: -358522.449159 EM: Round [13] log likelihood: -358521.836624 EM: Round [14] log likelihood: -358521.356292 EM: Round [15] log likelihood: -358520.973313 EM: Round [16] log likelihood: -358520.663584 EM: Round [17] log likelihood: -358520.410000 EM: Round [18] log likelihood: -358520.200152 EM: Round [19] log likelihood: -358520.024857 EM: Round [20] log likelihood: -358519.877205 EM: Round [21] log likelihood: -358519.751913 EM: Round [22] log likelihood: -358519.644890 EM: Round [23] log likelihood: -358519.552927 EM: Round [24] log likelihood: -358519.473481 EM: Round [25] log likelihood: -358519.404513 EM: Round [26] log likelihood: -358519.344378 EM: Round [27] log likelihood: -358519.291732 EM: Round [28] log likelihood: -358519.245472 EM: Round [29] log likelihood: -358519.204687 EM: Round [30] log likelihood: -358519.168616 EM: Round [31] log likelihood: -358519.136621 EM: Round [32] log likelihood: -358519.108166 EM: Round [33] log likelihood: -358519.082795 EM: Round [34] log likelihood: -358519.060123 EM: Round [35] log likelihood: -358519.039817 EM: Round [36] log likelihood: -358519.021594 EM: Round [37] log likelihood: -358519.005207 EM: Round [38] log likelihood: -358518.990446 EM: Round [39] log likelihood: -358518.977126 EM: Round [40] log likelihood: -358518.965086 EM: Round [41] log likelihood: -358518.954188 EM: Round [42] log likelihood: -358518.944308 EM: Round [43] log likelihood: -358518.935339 EM: Round [44] log likelihood: -358518.927185 EM: Round [45] log likelihood: -358518.919764 EM: Round [46] log likelihood: -358518.913001 EM: Round [47] log likelihood: -358518.906830 EM: Round [48] log likelihood: -358518.901194 EM: Round [49] log likelihood: -358518.896041 EM: Round [50] log likelihood: -358518.891325 EM: Round [51] log likelihood: -358518.887004 EM: Round [52] log likelihood: -358518.883041 EM: Round [53] log likelihood: -358518.879403 EM: Round [54] log likelihood: -358518.876061 EM: Round [55] log likelihood: -358518.872989 EM: Round [56] log likelihood: -358518.870161 EM: Round [57] log likelihood: -358518.867557 EM: Round [58] log likelihood: -358518.865156 EM: Round [59] log likelihood: -358518.862942 EM: Round [60] log likelihood: -358518.860898 EM: Round [61] log likelihood: -358518.859011 EM: Round [62] log likelihood: -358518.857265 EM: Round [63] log likelihood: -358518.855651 EM: Round [64] log likelihood: -358518.854157 EM: Round [65] log likelihood: -358518.852773 EM: Round [66] log likelihood: -358518.851491 EM: Round [67] log likelihood: -358518.850302 EM: Round [68] log likelihood: -358518.849198 EM: Round [69] log likelihood: -358518.848173 EM: Round [70] log likelihood: -358518.847221 EM: Round [71] log likelihood: -358518.846336 EM: Round [72] log likelihood: -358518.845513 EM: Round [73] log likelihood: -358518.844747 EM: Round [74] log likelihood: -358518.844034 EM: Round [75] log likelihood: -358518.843370 EM: Round [76] log likelihood: -358518.842750 EM: Round [77] log likelihood: -358518.842172 EM: Round [78] log likelihood: -358518.841633 EM: Round [79] log likelihood: -358518.841130 EM: Round [80] log likelihood: -358518.840659 EM: Round [81] log likelihood: -358518.840219 EM: Round [82] log likelihood: -358518.839808 EM: Round [83] log likelihood: -358518.839423 EM: Round [84] log likelihood: -358518.839063 EM: Round [85] log likelihood: -358518.838725 EM: Round [86] log likelihood: -358518.838408 EM: Round [87] log likelihood: -358518.838111 EM: Round [88] log likelihood: -358518.837833 EM: Round [89] log likelihood: -358518.837571 EM: Round [90] log likelihood: -358518.837325 EM: Round [91] log likelihood: -358518.837093 EM: Round [92] log likelihood: -358518.836876 EM: Round [93] log likelihood: -358518.836671 EM: Round [94] log likelihood: -358518.836478 EM: Round [95] log likelihood: -358518.836296 EM: Round [96] log likelihood: -358518.836124 EM: Round [97] log likelihood: -358518.835962 EM: Round [98] log likelihood: -358518.835809 EM: Round [99] log likelihood: -358518.835665 EM: Round [100] log likelihood: -358518.835528 EM: Round [101] log likelihood: -358518.835398 EM: Round [102] log likelihood: -358518.835276 EM: Round [103] log likelihood: -358518.835159 EM: Round [104] log likelihood: -358518.835049 EM: Round [105] log likelihood: -358518.834945 EM: Round [106] log likelihood: -358518.834845 EM: Stopping iterations at round 106 due to insufficient improvement in likelihood. EM: Starting log likelihood: -358631.778346 EM: Round [1] log likelihood: -358466.276268 EM: Round [2] log likelihood: -358401.638609 EM: Round [3] log likelihood: -358370.179009 EM: Round [4] log likelihood: -358353.291596 EM: Round [5] log likelihood: -358343.694739 EM: Round [6] log likelihood: -358337.989728 EM: Round [7] log likelihood: -358334.446808 EM: Round [8] log likelihood: -358332.147868 EM: Round [9] log likelihood: -358330.591620 EM: Round [10] log likelihood: -358329.496393 EM: Round [11] log likelihood: -358328.698730 EM: Round [12] log likelihood: -358328.100422 EM: Round [13] log likelihood: -358327.640322 EM: Round [14] log likelihood: -358327.279008 EM: Round [15] log likelihood: -358326.990215 EM: Round [16] log likelihood: -358326.755904 EM: Round [17] log likelihood: -358326.563346 EM: Round [18] log likelihood: -358326.403343 EM: Round [19] log likelihood: -358326.269103 EM: Round [20] log likelihood: -358326.155521 EM: Round [21] log likelihood: -358326.058697 EM: Round [22] log likelihood: -358325.975607 EM: Round [23] log likelihood: -358325.903877 EM: Round [24] log likelihood: -358325.841623 EM: Round [25] log likelihood: -358325.787330 EM: Round [26] log likelihood: -358325.739774 EM: Round [27] log likelihood: -358325.697953 EM: Round [28] log likelihood: -358325.661041 EM: Round [29] log likelihood: -358325.628355 EM: Round [30] log likelihood: -358325.599321 EM: Round [31] log likelihood: -358325.573459 EM: Round [32] log likelihood: -358325.550363 EM: Round [33] log likelihood: -358325.529687 EM: Round [34] log likelihood: -358325.511136 EM: Round [35] log likelihood: -358325.494456 EM: Round [36] log likelihood: -358325.479431 EM: Round [37] log likelihood: -358325.465870 EM: Round [38] log likelihood: -358325.453611 EM: Round [39] log likelihood: -358325.442510 EM: Round [40] log likelihood: -358325.432443 EM: Round [41] log likelihood: -358325.423300 EM: Round [42] log likelihood: -358325.414985 EM: Round [43] log likelihood: -358325.407413 EM: Round [44] log likelihood: -358325.400510 EM: Round [45] log likelihood: -358325.394209 EM: Round [46] log likelihood: -358325.388451 EM: Round [47] log likelihood: -358325.383184 EM: Round [48] log likelihood: -358325.378361 EM: Round [49] log likelihood: -358325.373941 EM: Round [50] log likelihood: -358325.369885 EM: Round [51] log likelihood: -358325.366161 EM: Round [52] log likelihood: -358325.362738 EM: Round [53] log likelihood: -358325.359590 EM: Round [54] log likelihood: -358325.356692 EM: Round [55] log likelihood: -358325.354022 EM: Round [56] log likelihood: -358325.351561 EM: Round [57] log likelihood: -358325.349290 EM: Round [58] log likelihood: -358325.347193 EM: Round [59] log likelihood: -358325.345256 EM: Round [60] log likelihood: -358325.343465 EM: Round [61] log likelihood: -358325.341808 EM: Round [62] log likelihood: -358325.340275 EM: Round [63] log likelihood: -358325.338854 EM: Round [64] log likelihood: -358325.337537 EM: Round [65] log likelihood: -358325.336316 EM: Round [66] log likelihood: -358325.335183 EM: Round [67] log likelihood: -358325.334131 EM: Round [68] log likelihood: -358325.333154 EM: Round [69] log likelihood: -358325.332245 EM: Round [70] log likelihood: -358325.331400 EM: Round [71] log likelihood: -358325.330614 EM: Round [72] log likelihood: -358325.329881 EM: Round [73] log likelihood: -358325.329199 EM: Round [74] log likelihood: -358325.328564 EM: Round [75] log likelihood: -358325.327971 EM: Round [76] log likelihood: -358325.327417 EM: Round [77] log likelihood: -358325.326901 EM: Round [78] log likelihood: -358325.326418 EM: Round [79] log likelihood: -358325.325967 EM: Round [80] log likelihood: -358325.325545 EM: Round [81] log likelihood: -358325.325151 EM: Round [82] log likelihood: -358325.324781 EM: Round [83] log likelihood: -358325.324435 EM: Round [84] log likelihood: -358325.324111 EM: Round [85] log likelihood: -358325.323807 EM: Round [86] log likelihood: -358325.323521 EM: Round [87] log likelihood: -358325.323253 EM: Round [88] log likelihood: -358325.323002 EM: Round [89] log likelihood: -358325.322765 EM: Round [90] log likelihood: -358325.322542 EM: Round [91] log likelihood: -358325.322333 EM: Round [92] log likelihood: -358325.322136 EM: Round [93] log likelihood: -358325.321950 EM: Round [94] log likelihood: -358325.321774 EM: Round [95] log likelihood: -358325.321609 EM: Round [96] log likelihood: -358325.321453 EM: Round [97] log likelihood: -358325.321305 EM: Round [98] log likelihood: -358325.321166 EM: Round [99] log likelihood: -358325.321034 EM: Round [100] log likelihood: -358325.320909 EM: Round [101] log likelihood: -358325.320790 EM: Round [102] log likelihood: -358325.320678 EM: Round [103] log likelihood: -358325.320572 EM: Round [104] log likelihood: -358325.320471 EM: Round [105] log likelihood: -358325.320374 EM: Stopping iterations at round 105 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.AkzD6AYLen/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.AkzD6AYLen/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.AkzD6AYLen/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 232293608 > /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.AkzD6AYLen/ctat_genome_lib_build_dir > /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.AkzD6AYLen/ctat_genome_lib_build_dir --annotate /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.AkzD6AYLen/ctat_genome_lib_build_dir -done, see /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.AkzD6AYLen/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 1808, filtered: 12316) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.AkzD6AYLen/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.AkzD6AYLen/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000287721.1] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000235749.3] WARNING, no entry stored in dbm for [ENSG00000281903.2] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000220685.3] WARNING, no entry stored in dbm for [ENSG00000215158.9] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000262801.6] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000158482.10] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000250251.6] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000236051.7] WARNING, no entry stored in dbm for [ENSG00000172965.17] WARNING, no entry stored in dbm for [ENSG00000204745.4] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000245958.6] WARNING, no entry stored in dbm for [ENSG00000283752.1] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000257252.6] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000254485.5] WARNING, no entry stored in dbm for [ENSG00000226823.1] WARNING, no entry stored in dbm for [ENSG00000202058.1] WARNING, no entry stored in dbm for [ENSG00000222386.1] WARNING, no entry stored in dbm for [ENSG00000202058.1] WARNING, no entry stored in dbm for [ENSG00000200794.1] WARNING, no entry stored in dbm for [ENSG00000241350.1] WARNING, no entry stored in dbm for [ENSG00000239969.5] WARNING, no entry stored in dbm for [ENSG00000186704.9] WARNING, no entry stored in dbm for [ENSG00000254275.6] WARNING, no entry stored in dbm for [ENSG00000251649.2] WARNING, no entry stored in dbm for 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WARNING, no entry stored in dbm for [ENSG00000200681.1] WARNING, no entry stored in dbm for [ENSG00000206836.1] WARNING, no entry stored in dbm for [ENSG00000257038.1] WARNING, no entry stored in dbm for [ENSG00000258779.8] WARNING, no entry stored in dbm for [ENSG00000255325.2] WARNING, no entry stored in dbm for [ENSG00000276868.1] WARNING, no entry stored in dbm for [ENSG00000224812.3] WARNING, no entry stored in dbm for [ENSG00000270499.1] WARNING, no entry stored in dbm for [ENSG00000182796.14] WARNING, no entry stored in dbm for [ENSG00000223088.1] WARNING, no entry stored in dbm for [ENSG00000284977.2] WARNING, no entry stored in dbm for [ENSG00000227160.3] WARNING, no entry stored in dbm for [ENSG00000248932.6] WARNING, no entry stored in dbm for [ENSG00000223947.1] WARNING, no entry stored in dbm for [ENSG00000224966.4] WARNING, no entry stored in dbm for [ENSG00000229372.1] WARNING, no entry stored in dbm for [ENSG00000282961.1] WARNING, no entry stored in dbm for [ENSG00000259977.1] WARNING, no entry stored in dbm for [ENSG00000223727.6] WARNING, no entry stored in dbm for [ENSG00000240859.3] WARNING, no entry stored in dbm for [ENSG00000254518.1] WARNING, no entry stored in dbm for [ENSG00000280425.2] WARNING, no entry stored in dbm for [ENSG00000227733.10] WARNING, no entry stored in dbm for [ENSG00000248660.1] WARNING, no entry stored in dbm for [ENSG00000242156.1] WARNING, no entry stored in dbm for [ENSG00000224899.1] WARNING, no entry stored in dbm for [ENSG00000242207.1] WARNING, no entry stored in dbm for [ENSG00000251987.1] WARNING, no entry stored in dbm for [ENSG00000263934.5] WARNING, no entry stored in dbm for [ENSG00000221400.2] WARNING, no entry stored in dbm for [ENSG00000232956.9] WARNING, no entry stored in dbm for [ENSG00000279940.1] WARNING, no entry stored in dbm for [ENSG00000242753.2] WARNING, no entry stored in dbm for [ENSG00000225689.2] WARNING, no entry stored in dbm for [ENSG00000214381.6] WARNING, no entry stored in 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WARNING, no entry stored in dbm for [ENSG00000200783.1] WARNING, no entry stored in dbm for [ENSG00000202241.1] WARNING, no entry stored in dbm for [ENSG00000200475.1] WARNING, no entry stored in dbm for [ENSG00000200472.1] WARNING, no entry stored in dbm for [ENSG00000200475.1] WARNING, no entry stored in dbm for [ENSG00000223117.1] WARNING, no entry stored in dbm for [ENSG00000200475.1] WARNING, no entry stored in dbm for [ENSG00000202415.1] WARNING, no entry stored in dbm for [ENSG00000200475.1] WARNING, no entry stored in dbm for [ENSG00000222974.1] WARNING, no entry stored in dbm for [ENSG00000200475.1] WARNING, no entry stored in dbm for [ENSG00000222343.1] WARNING, no entry stored in dbm for [ENSG00000250230.3] WARNING, no entry stored in dbm for [ENSG00000280007.1] WARNING, no entry stored in dbm for [ENSG00000285999.1] WARNING, no entry stored in dbm for [ENSG00000236922.10] WARNING, no entry stored in dbm for [ENSG00000219928.2] WARNING, no entry stored in dbm for [ENSG00000229419.1] WARNING, no entry stored in dbm for [ENSG00000235777.1] WARNING, no entry stored in dbm for [ENSG00000254208.1] WARNING, no entry stored in dbm for [ENSG00000227373.6] WARNING, no entry stored in dbm for [ENSG00000250182.3] WARNING, no entry stored in dbm for [ENSG00000263072.8] WARNING, no entry stored in dbm for [ENSG00000257225.1] WARNING, no entry stored in dbm for [ENSG00000275212.3] WARNING, no entry stored in dbm for [ENSG00000204429.4] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000259948.2] WARNING, no entry stored in dbm for [ENSG00000260799.1] WARNING, no entry stored in dbm for [ENSG00000236116.1] WARNING, no entry stored in dbm for [ENSG00000231721.7] WARNING, no entry stored in dbm for [ENSG00000254389.3] WARNING, no entry stored in dbm for [ENSG00000230510.7] WARNING, no entry stored in dbm for [ENSG00000230630.5] WARNING, no entry stored in dbm for [ENSG00000224086.6] WARNING, no entry stored in dbm for [ENSG00000272655.2] WARNING, no entry stored in dbm for [ENSG00000215196.5] WARNING, no entry stored in dbm for [ENSG00000285751.1] WARNING, no entry stored in dbm for [ENSG00000260855.1] WARNING, no entry stored in dbm for [ENSG00000260855.1] WARNING, no entry stored in dbm for [ENSG00000258057.6] WARNING, no entry stored in dbm for [ENSG00000230606.11] WARNING, no entry stored in dbm for [ENSG00000231881.2] WARNING, no entry stored in dbm for [ENSG00000244257.5] WARNING, no entry stored in dbm for [ENSG00000266667.1] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000267107.8] WARNING, no entry stored in dbm for [ENSG00000286887.1] WARNING, no entry stored in dbm for [ENSG00000254719.1] WARNING, no entry stored in dbm for [ENSG00000257285.6] WARNING, no entry stored in dbm for [ENSG00000133624.13] WARNING, no entry stored in dbm for [ENSG00000226949.1] WARNING, no entry stored in dbm for [ENSG00000231383.2] WARNING, no entry stored in dbm for [ENSG00000281903.2] WARNING, no entry stored in dbm for [ENSG00000188599.17] WARNING, no entry stored in dbm for [ENSG00000272195.1] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000288670.1] WARNING, no entry stored in dbm for [ENSG00000206337.12] WARNING, no entry stored in dbm for [ENSG00000251634.2] WARNING, no entry stored in dbm for [ENSG00000234793.1] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000274656.1] WARNING, no entry stored in dbm for [ENSG00000239335.4] WARNING, no entry stored in dbm for [ENSG00000250324.2] WARNING, no entry stored in dbm for [ENSG00000188002.10] WARNING, no entry stored in dbm for [ENSG00000285219.2] WARNING, no entry stored in dbm for [ENSG00000230500.1] WARNING, no entry stored in dbm for [ENSG00000267374.2] WARNING, no entry stored in dbm for [ENSG00000283805.1] WARNING, no entry stored in dbm for [ENSG00000267532.5] WARNING, no entry stored in dbm for [ENSG00000279608.1] WARNING, no entry stored in dbm for [ENSG00000233006.8] WARNING, no entry stored in dbm for [ENSG00000266643.1] WARNING, no entry stored in dbm for [ENSG00000255248.9] WARNING, no entry stored in dbm for [ENSG00000272894.5] WARNING, no entry stored in dbm for [ENSG00000213078.3] WARNING, no entry stored in dbm for [ENSG00000271270.7] WARNING, no entry stored in dbm for [ENSG00000249669.10] WARNING, no entry stored in dbm for [ENSG00000231689.2] WARNING, no entry stored in dbm for [ENSG00000231312.7] WARNING, no entry stored in dbm for [ENSG00000237567.2] WARNING, no entry stored in dbm for [ENSG00000286295.1] WARNING, no entry stored in dbm for [ENSG00000133519.12] WARNING, no entry stored in dbm for [ENSG00000251513.2] WARNING, no entry stored in dbm for [ENSG00000232527.8] WARNING, no entry stored in dbm for [ENSG00000272779.1] WARNING, no entry stored in dbm for [ENSG00000254416.6] WARNING, no entry stored in dbm for [ENSG00000241288.8] WARNING, no entry stored in dbm for [ENSG00000255970.1] WARNING, no entry stored in dbm for [ENSG00000259448.3] WARNING, no entry stored in dbm for [ENSG00000206187.4] WARNING, no entry stored in dbm for [ENSG00000260792.1] WARNING, no entry stored in dbm for [ENSG00000204650.14] WARNING, no entry stored in dbm for [ENSG00000232190.3] WARNING, no entry stored in dbm for [ENSG00000261348.2] WARNING, no entry stored in dbm for [ENSG00000254101.7] WARNING, no entry stored in dbm for [ENSG00000224153.3] WARNING, no entry stored in dbm for [ENSG00000198685.4] WARNING, no entry stored in dbm for [ENSG00000228065.11] WARNING, no entry stored in dbm for [ENSG00000233901.6] WARNING, no entry stored in dbm for [ENSG00000254562.7] WARNING, no entry stored in dbm for [ENSG00000236204.6] WARNING, no entry stored in dbm for [ENSG00000259471.1] WARNING, no entry stored in dbm for [ENSG00000224577.3] WARNING, no entry stored in dbm for [ENSG00000280809.4] WARNING, no entry stored in dbm for [ENSG00000225269.3] WARNING, no entry stored in dbm for [ENSG00000280279.1] WARNING, no entry stored in dbm for [ENSG00000215190.9] WARNING, no entry stored in dbm for [ENSG00000239650.4] WARNING, no entry stored in dbm for [ENSG00000226067.7] WARNING, no entry stored in dbm for [ENSG00000223779.6] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000153363.13] WARNING, no entry stored in dbm for [ENSG00000236790.6] WARNING, no entry stored in dbm for [ENSG00000256642.1] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000238094.1] WARNING, no entry stored in dbm for [ENSG00000255874.2] WARNING, no entry stored in dbm for [ENSG00000264707.1] WARNING, no entry stored in dbm for [ENSG00000257195.1] WARNING, no entry stored in dbm for [ENSG00000258120.2] WARNING, no entry stored in dbm for [ENSG00000250412.1] WARNING, no entry stored in dbm for [ENSG00000255050.1] WARNING, no entry stored in dbm for [ENSG00000250658.1] WARNING, no entry stored in dbm for [ENSG00000279166.1] WARNING, no entry stored in dbm for [ENSG00000224536.2] WARNING, no entry stored in dbm for [ENSG00000197536.11] WARNING, no entry stored in dbm for [ENSG00000177112.8] WARNING, no entry stored in dbm for [ENSG00000254034.2] WARNING, no entry stored in dbm for [ENSG00000264970.2] WARNING, no entry stored in dbm for [ENSG00000264431.1] WARNING, no entry stored in dbm for [ENSG00000224975.1] WARNING, no entry stored in dbm for [ENSG00000257720.1] WARNING, no entry stored in dbm for [ENSG00000227115.8] WARNING, no entry stored in dbm for [ENSG00000238231.2] WARNING, no entry stored in dbm for [ENSG00000227733.10] WARNING, no entry stored in dbm for [ENSG00000227733.10] WARNING, no entry stored in dbm for [ENSG00000237380.7] WARNING, no entry stored in dbm for [ENSG00000272973.1] WARNING, no entry stored in dbm for [ENSG00000243188.1] WARNING, no entry stored in dbm for [ENSG00000205412.5] WARNING, no entry stored in dbm for [ENSG00000213707.2] WARNING, no entry stored in dbm for [ENSG00000271044.1] WARNING, no entry stored in dbm for [ENSG00000273419.1] WARNING, no entry stored in dbm for [ENSG00000287925.1] WARNING, no entry stored in dbm for [ENSG00000243753.5] WARNING, no entry stored in dbm for [ENSG00000168405.17] WARNING, no entry stored in dbm for [ENSG00000272556.2] WARNING, no entry stored in dbm for [ENSG00000276550.4] WARNING, no entry stored in dbm for [ENSG00000268879.1] WARNING, no entry stored in dbm for [ENSG00000277720.1] WARNING, no entry stored in dbm for [ENSG00000216436.2] WARNING, no entry stored in dbm for [ENSG00000250778.1] WARNING, no entry stored in dbm for [ENSG00000272645.3] WARNING, no entry stored in dbm for [ENSG00000231666.7] WARNING, no entry stored in dbm for [ENSG00000214433.4] WARNING, no entry stored in dbm for [ENSG00000238105.7] WARNING, no entry stored in dbm for [ENSG00000240927.3] WARNING, no entry stored in dbm for [ENSG00000240373.1] WARNING, no entry stored in dbm for [ENSG00000270538.1] WARNING, no entry stored in dbm for [ENSG00000236263.1] WARNING, no entry stored in dbm for [ENSG00000272645.3] WARNING, no entry stored in dbm for [ENSG00000230590.11] WARNING, no entry stored in dbm for [ENSG00000203801.8] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000180769.10] WARNING, no entry stored in dbm for [ENSG00000248431.2] WARNING, no entry stored in dbm for [ENSG00000235621.9] WARNING, no entry stored in dbm for [ENSG00000233013.10] WARNING, no entry stored in dbm for [ENSG00000236438.7] WARNING, no entry stored in dbm for [ENSG00000236438.7] WARNING, no entry stored in dbm for [ENSG00000286982.1] WARNING, no entry stored in dbm for [ENSG00000225393.1] WARNING, no entry stored in dbm for [ENSG00000226521.7] WARNING, no entry stored in dbm for [ENSG00000264044.1] WARNING, no entry stored in dbm for [ENSG00000100058.12] WARNING, no entry stored in dbm for [ENSG00000286340.1] WARNING, no entry stored in dbm for [ENSG00000262999.1] WARNING, no entry stored in dbm for [ENSG00000197182.14] WARNING, no entry stored in dbm for [ENSG00000229358.3] WARNING, no entry stored in dbm for [ENSG00000225808.1] WARNING, no entry stored in dbm for [ENSG00000225808.1] WARNING, no entry stored in dbm for [ENSG00000225808.1] WARNING, no entry stored in dbm for [ENSG00000225808.1] WARNING, no entry stored in dbm for [ENSG00000225808.1] WARNING, no entry stored in dbm for [ENSG00000225808.1] WARNING, no entry stored in dbm for [ENSG00000225808.1] WARNING, no entry stored in dbm for [ENSG00000225808.1] WARNING, no entry stored in dbm for [ENSG00000225808.1] WARNING, no entry stored in dbm for [ENSG00000225808.1] WARNING, no entry stored in dbm for [ENSG00000225808.1] WARNING, no entry stored in dbm for [ENSG00000225808.1] WARNING, no entry stored in dbm for [ENSG00000225808.1] WARNING, no entry stored in dbm for [ENSG00000225808.1] WARNING, no entry stored in dbm for [ENSG00000225808.1] WARNING, no entry stored in dbm for [ENSG00000225808.1] WARNING, no entry stored in dbm for [ENSG00000225808.1] WARNING, no entry stored in dbm for [ENSG00000225808.1] WARNING, no entry stored in dbm for [ENSG00000225808.1] WARNING, no entry stored in dbm for [ENSG00000225808.1] WARNING, no entry stored in dbm for [ENSG00000203993.6] WARNING, no entry stored in dbm for [ENSG00000249780.1] WARNING, no entry stored in dbm for [ENSG00000263508.6] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000285280.2] WARNING, no entry stored in dbm for [ENSG00000268392.1] WARNING, no entry stored in dbm for [ENSG00000233514.1] WARNING, no entry stored in dbm for [ENSG00000231312.7] WARNING, no entry stored in dbm for [ENSG00000226950.8] WARNING, no entry stored in dbm for [ENSG00000287315.1] WARNING, no entry stored in dbm for [ENSG00000222041.11] WARNING, no entry stored in dbm for [ENSG00000227579.6] WARNING, no entry stored in dbm for [ENSG00000286458.1] WARNING, no entry stored in dbm for [ENSG00000240015.2] WARNING, no entry stored in dbm for [ENSG00000226383.7] WARNING, no entry stored in dbm for [ENSG00000227066.2] WARNING, no entry stored in dbm for [ENSG00000226891.9] WARNING, no entry stored in dbm for [ENSG00000233025.1] WARNING, no entry stored in dbm for [ENSG00000100058.12] WARNING, no entry stored in dbm for [ENSG00000215908.10] WARNING, no entry stored in dbm for [ENSG00000215908.10] WARNING, no entry stored in dbm for [ENSG00000236283.5] WARNING, no entry stored in dbm for [ENSG00000237773.7] WARNING, no entry stored in dbm for [ENSG00000233090.1] WARNING, no entry stored in dbm for [ENSG00000270533.2] WARNING, no entry stored in dbm for [ENSG00000216829.6] WARNING, no entry stored in dbm for [ENSG00000236088.10] WARNING, no entry stored in dbm for [ENSG00000100068.14] WARNING, no entry stored in dbm for [ENSG00000258343.2] WARNING, no entry stored in dbm for [ENSG00000246695.8] WARNING, no entry stored in dbm for [ENSG00000223960.7] WARNING, no entry stored in dbm for [ENSG00000223960.7] WARNING, no entry stored in dbm for [ENSG00000205559.5] WARNING, no entry stored in dbm for [ENSG00000180846.8] WARNING, no entry stored in dbm for [ENSG00000257391.1] WARNING, no entry stored in dbm for [ENSG00000288091.1] WARNING, no entry stored in dbm for [ENSG00000239224.3] WARNING, no entry stored in dbm for [ENSG00000283627.1] WARNING, no entry stored in dbm for [ENSG00000241104.5] WARNING, no entry stored in dbm for [ENSG00000255856.2] WARNING, no entry stored in dbm for [ENSG00000226137.5] WARNING, no entry stored in dbm for [ENSG00000267083.1] WARNING, no entry stored in dbm for [ENSG00000236456.1] WARNING, no entry stored in dbm for [ENSG00000288540.1] WARNING, no entry stored in dbm for [ENSG00000228544.1] WARNING, no entry stored in dbm for [ENSG00000239665.8] WARNING, no entry stored in dbm for [ENSG00000223745.8] WARNING, no entry stored in dbm for [ENSG00000226950.8] WARNING, no entry stored in dbm for [ENSG00000223215.1] WARNING, no entry stored in dbm for [ENSG00000278872.1] WARNING, no entry stored in dbm for [ENSG00000270453.1] WARNING, no entry stored in dbm for [ENSG00000204352.4] WARNING, no entry stored in dbm for [ENSG00000224086.6] WARNING, no entry stored in dbm for [ENSG00000224462.2] WARNING, no entry stored in dbm for [ENSG00000224462.2] WARNING, no entry stored in dbm for [ENSG00000224462.2] WARNING, no entry stored in dbm for [ENSG00000224462.2] WARNING, no entry stored in dbm for [ENSG00000224462.2] WARNING, no entry stored in dbm for [ENSG00000224462.2] WARNING, no entry stored in dbm for [ENSG00000198590.12] WARNING, no entry stored in dbm for [ENSG00000188511.12] WARNING, no entry stored in dbm for [ENSG00000249476.2] WARNING, no entry stored in dbm for [ENSG00000258732.1] WARNING, no entry stored in dbm for [ENSG00000228634.1] WARNING, no entry stored in dbm for [ENSG00000280424.1] WARNING, no entry stored in dbm for [ENSG00000216657.1] WARNING, no entry stored in dbm for [ENSG00000231424.3] WARNING, no entry stored in dbm for [ENSG00000237265.6] WARNING, no entry stored in dbm for [ENSG00000239407.5] WARNING, no entry stored in dbm for [ENSG00000243828.2] WARNING, no entry stored in dbm for [ENSG00000271913.7] WARNING, no entry stored in dbm for [ENSG00000234072.1] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000199535.1] WARNING, no entry stored in dbm for [ENSG00000279022.1] WARNING, no entry stored in dbm for [ENSG00000279277.2] WARNING, no entry stored in dbm for [ENSG00000205464.13] WARNING, no entry stored in dbm for [ENSG00000287277.1] WARNING, no entry stored in dbm for [ENSG00000213373.7] WARNING, no entry stored in dbm for [ENSG00000223546.7] WARNING, no entry stored in dbm for [ENSG00000260896.6] WARNING, no entry stored in dbm for [ENSG00000267529.3] WARNING, no entry stored in dbm for [ENSG00000266373.1] WARNING, no entry stored in dbm for [ENSG00000266373.1] WARNING, no entry stored in dbm for [ENSG00000230951.1] WARNING, no entry stored in dbm for [ENSG00000254676.1] WARNING, no entry stored in dbm for [ENSG00000230212.6] WARNING, no entry stored in dbm for [ENSG00000279467.1] WARNING, no entry stored in dbm for [ENSG00000235437.8] WARNING, no entry stored in dbm for [ENSG00000232748.3] WARNING, no entry stored in dbm for [ENSG00000259984.1] WARNING, no entry stored in dbm for [ENSG00000238009.6] WARNING, no entry stored in dbm for [ENSG00000275046.1] WARNING, no entry stored in dbm for [ENSG00000240291.1] WARNING, no entry stored in dbm for [ENSG00000225096.3] WARNING, no entry stored in dbm for [ENSG00000225096.3] WARNING, no entry stored in dbm for [ENSG00000232499.2] WARNING, no entry stored in dbm for [ENSG00000212961.4] WARNING, no entry stored in dbm for [ENSG00000227619.3] WARNING, no entry stored in dbm for [ENSG00000234062.8] WARNING, no entry stored in dbm for [ENSG00000235020.5] WARNING, no entry stored in dbm for [ENSG00000217801.10] WARNING, no entry stored in dbm for [ENSG00000228792.3] WARNING, no entry stored in dbm for [ENSG00000258599.2] WARNING, no entry stored in dbm for [ENSG00000224810.1] WARNING, no entry stored in dbm for [ENSG00000236358.1] WARNING, no entry stored in dbm for [ENSG00000237480.3] WARNING, no entry stored in dbm for [ENSG00000246203.2] WARNING, no entry stored in dbm for [ENSG00000286699.1] WARNING, no entry stored in dbm for [ENSG00000234648.1] WARNING, no entry stored in dbm for [ENSG00000232573.1] WARNING, no entry stored in dbm for [ENSG00000259133.5] WARNING, no entry stored in dbm for [ENSG00000258656.1] WARNING, no entry stored in dbm for [ENSG00000214195.4] WARNING, no entry stored in dbm for [ENSG00000234918.1] WARNING, no entry stored in dbm for [ENSG00000230490.3] WARNING, no entry stored in dbm for [ENSG00000273149.1] WARNING, no entry stored in dbm for [ENSG00000273149.1] WARNING, no entry stored in dbm for [ENSG00000259093.2] WARNING, no entry stored in dbm for [ENSG00000273619.1] WARNING, no entry stored in dbm for [ENSG00000283405.2] WARNING, no entry stored in dbm for [ENSG00000093100.13] WARNING, no entry stored in dbm for [ENSG00000259977.1] WARNING, no entry stored in dbm for [ENSG00000286825.1] WARNING, no entry stored in dbm for [ENSG00000217746.1] WARNING, no entry stored in dbm for [ENSG00000286381.1] WARNING, no entry stored in dbm for [ENSG00000227486.2] WARNING, no entry stored in dbm for [ENSG00000260532.1] WARNING, no entry stored in dbm for [ENSG00000226310.1] WARNING, no entry stored in dbm for [ENSG00000226310.1] WARNING, no entry stored in dbm for [ENSG00000226310.1] WARNING, no entry stored in dbm for [ENSG00000282740.1] WARNING, no entry stored in dbm for [ENSG00000180846.8] WARNING, no entry stored in dbm for [ENSG00000231713.2] WARNING, no entry stored in dbm for [ENSG00000178803.12] WARNING, no entry stored in dbm for [ENSG00000249628.3] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000285844.2] WARNING, no entry stored in dbm for [ENSG00000280263.1] WARNING, no entry stored in dbm for [ENSG00000251452.2] WARNING, no entry stored in dbm for [ENSG00000254319.6] WARNING, no entry stored in dbm for [ENSG00000276216.1] WARNING, no entry stored in dbm for [ENSG00000284964.1] WARNING, no entry stored in dbm for [ENSG00000284964.1] WARNING, no entry stored in dbm for [ENSG00000274423.1] WARNING, no entry stored in dbm for [ENSG00000284964.1] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000273598.1] WARNING, no entry stored in dbm for [ENSG00000279821.1] WARNING, no entry stored in dbm for [ENSG00000266717.1] WARNING, no entry stored in dbm for [ENSG00000214999.3] WARNING, no entry stored in dbm for [ENSG00000253452.6] WARNING, no entry stored in dbm for [ENSG00000278022.1] WARNING, no entry stored in dbm for [ENSG00000237961.4] WARNING, no entry stored in dbm for [ENSG00000278931.1] WARNING, no entry stored in dbm for [ENSG00000284675.1] WARNING, no entry stored in dbm for [ENSG00000244513.7] WARNING, no entry stored in dbm for [ENSG00000250241.6] WARNING, no entry stored in dbm for [ENSG00000241770.1] WARNING, no entry stored in dbm for [ENSG00000254285.3] WARNING, no entry stored in dbm for [ENSG00000285108.1] WARNING, no entry stored in dbm for [ENSG00000287129.1] WARNING, no entry stored in dbm for [ENSG00000237877.7] WARNING, no entry stored in dbm for [ENSG00000287129.1] WARNING, no entry stored in dbm for [ENSG00000231646.6] WARNING, no entry stored in dbm for [ENSG00000285631.1] WARNING, no entry stored in dbm for [ENSG00000251378.1] WARNING, no entry stored in dbm for [ENSG00000228303.1] WARNING, no entry stored in dbm for [ENSG00000249001.5] WARNING, no entry stored in dbm for [ENSG00000284968.1] WARNING, no entry stored in dbm for [ENSG00000243176.6] WARNING, no entry stored in dbm for [ENSG00000282057.1] WARNING, no entry stored in dbm for [ENSG00000260750.7] WARNING, no entry stored in dbm for [ENSG00000276538.1] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000259418.1] WARNING, no entry stored in dbm for [ENSG00000259381.2] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000250869.2] WARNING, no entry stored in dbm for [ENSG00000280362.1] WARNING, no entry stored in dbm for [ENSG00000228327.3] WARNING, no entry stored in dbm for [ENSG00000285744.1] WARNING, no entry stored in dbm for [ENSG00000286935.1] WARNING, no entry stored in dbm for [ENSG00000259511.3] WARNING, no entry stored in dbm for [ENSG00000273329.1] WARNING, no entry stored in dbm for [ENSG00000279863.1] WARNING, no entry stored in dbm for [ENSG00000254951.7] WARNING, no entry stored in dbm for [ENSG00000261815.1] WARNING, no entry stored in dbm for [ENSG00000260963.2] WARNING, no entry stored in dbm for [ENSG00000267095.1] WARNING, no entry stored in dbm for [ENSG00000248827.1] WARNING, no entry stored in dbm for [ENSG00000285600.1] WARNING, no entry stored in dbm for [ENSG00000287555.1] WARNING, no entry stored in dbm for [ENSG00000259172.1] WARNING, no entry stored in dbm for [ENSG00000287621.1] WARNING, no entry stored in dbm for [ENSG00000259407.1] WARNING, no entry stored in dbm for [ENSG00000287512.1] WARNING, no entry stored in dbm for [ENSG00000271122.1] WARNING, no entry stored in dbm for [ENSG00000226380.9] WARNING, no entry stored in dbm for [ENSG00000251421.2] WARNING, no entry stored in dbm for [ENSG00000243744.2] WARNING, no entry stored in dbm for [ENSG00000229700.1] WARNING, no entry stored in dbm for [ENSG00000267075.1] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000244251.1] WARNING, no entry stored in dbm for [ENSG00000254363.6] WARNING, no entry stored in dbm for [ENSG00000249839.1] WARNING, no entry stored in dbm for [ENSG00000249839.1] WARNING, no entry stored in dbm for [ENSG00000205212.5] WARNING, no entry stored in dbm for [ENSG00000270804.1] WARNING, no entry stored in dbm for [ENSG00000249588.1] WARNING, no entry stored in dbm for [ENSG00000259564.2] WARNING, no entry stored in dbm for [ENSG00000111788.10] WARNING, no entry stored in dbm for [ENSG00000238045.9] WARNING, no entry stored in dbm for [ENSG00000284649.1] WARNING, no entry stored in dbm for [ENSG00000214331.8] WARNING, no entry stored in dbm for [ENSG00000271109.2] WARNING, no entry stored in dbm for [ENSG00000274525.1] WARNING, no entry stored in dbm for [ENSG00000230092.7] WARNING, no entry stored in dbm for [ENSG00000287603.1] WARNING, no entry stored in dbm for [ENSG00000283041.1] WARNING, no entry stored in dbm for [ENSG00000262202.4] WARNING, no entry stored in dbm for [ENSG00000262202.4] WARNING, no entry stored in dbm for [ENSG00000287498.1] WARNING, no entry stored in dbm for [ENSG00000267575.7] WARNING, no entry stored in dbm for [ENSG00000261786.1] WARNING, no entry stored in dbm for [ENSG00000262879.6] WARNING, no entry stored in dbm for [ENSG00000272736.5] WARNING, no entry stored in dbm for [ENSG00000214970.8] WARNING, no entry stored in dbm for [ENSG00000268983.1] WARNING, no entry stored in dbm for [ENSG00000280004.1] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000286423.1] WARNING, no entry stored in dbm for [ENSG00000279525.1] WARNING, no entry stored in dbm for [ENSG00000225722.1] WARNING, no entry stored in dbm for [ENSG00000255642.1] WARNING, no entry stored in dbm for [ENSG00000283544.1] WARNING, no entry stored in dbm for [ENSG00000237296.9] * STAR-Fusion complete. See output: /tmp/nxf.AkzD6AYLen/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)