.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_INDEX_ALIGNMENT_CRAM (tih_rna_sample_00163_23H5VFLT4_s43)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c5/ff8fd584b5dac898f09b10e3fd1c35/.command.log
Size: 510 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_INDEX_ALIGNMENT_CRAM (tih_rna_sample_00163_23H5VFLT4_s43)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c5/ff8fd584b5dac898f09b10e3fd1c35/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/20/b7cbf65a19ab991bbd619980fafb56/tih_rna_sample_00163_23H5VFLT4_s43.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c5/ff8fd584b5dac898f09b10e3fd1c35/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory