AIH curated blacklist: matched 8 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 169
Pass (FILTER=PASS): 5 (3.0%)
Fail (FILTER=FAIL): 164 (97.0%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 8
All 8 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 72
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0);aih_curated_blacklist: 4
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(low<high): 3
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 2
total_reads_below_min(7.0<8.0): 2
Breakdown by confidence:
high: 5 pass, 6 fail (total: 11)
low: 0 pass, 50 fail (total: 50)
medium: 0 pass, 108 fail (total: 108)
Arriba filter: 169 rows -> 5 PASS; wrote tih_rna_sample_00127_23H5VFLT4_s08.arriba.fusions.filtered.tsv and tih_rna_sample_00127_23H5VFLT4_s08.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00127_23H5VFLT4_s08.arriba.fusions.filter_summary.txt