Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8a/1bb7fa3d42866de72ad59ea7a2aabd/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ba/57cc45ab14b44dc270407e78bc8c32/V4_0001_RNA_0005_23H5VFLT4_s09.features.csv Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8a/1bb7fa3d42866de72ad59ea7a2aabd/.command.run ==> STAGING COMPLETE (3 inputs) Predicting contamination for 1 sample(s)... Detection threshold: VAF_p90 < 0.9999 Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65 V4_0001_RNA_0005_23H5VFLT4_s09: vaf_p90=1.000000 -> CLEAN Output saved to: V4_0001_RNA_0005_23H5VFLT4_s09.predictions.csv Summary: 0/1 samples flagged as contaminated