File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d8/ee780cbabfe7a6cf5c60ebfe2d641b/.command.err
Size
634 bytes
Task
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_TO_MULTIQC (GM24385_0001_RNA_0001_23H5VFLT4_s08)
Attempt

Content

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Processing SeqTools file: GM24385_0001_RNA_0001_23H5VFLT4_s08_full_basic_stats.tsv
Warning: scipy not available. GC bias calculation will be simplified.
Successfully converted GM24385_0001_RNA_0001_23H5VFLT4_s08_full_basic_stats.tsv to GM24385_0001_RNA_0001_23H5VFLT4_s08_seqtool_mqc.tsv
  Samples: 1
  SeqTools (general stats) columns: 18
  Metrics: reads, frac_unmapped, frac_dupes, unique_reads, frac_reads_on_target, frac_pairs_on_target, frac_reads_off_target, frac_pairs_off_target, reads_on_target, pairs_on_target, reads_off_target, pairs_off_target, mean_depth, q50_depth, frac_bases_gt30x, frac_bases_gt100x, n_q30, gc_bias