.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_INDEX_ALIGNMENT_CRAM (V4_0001_RNA_0005_23H5VFLT4_s26)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/da8e1b7cfc4c3ac8486d4ec77efc0c/.command.log
Size: 506 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_INDEX_ALIGNMENT_CRAM (V4_0001_RNA_0005_23H5VFLT4_s26)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/69/3a6ab410b29cae30365d0f696fd99f/V4_0001_RNA_0005_23H5VFLT4_s26.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/da8e1b7cfc4c3ac8486d4ec77efc0c/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/da8e1b7cfc4c3ac8486d4ec77efc0c/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory