AIH curated blacklist: matched 10 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 243
Pass (FILTER=PASS): 15 (6.2%)
Fail (FILTER=FAIL): 228 (93.8%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 10
All 10 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 76
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 36
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 16
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 12
confidence_below_min(low<high): 10
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 6
confidence_below_min(medium<high);aih_curated_blacklist: 6
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 3
Breakdown by confidence:
high: 15 pass, 6 fail (total: 21)
low: 0 pass, 112 fail (total: 112)
medium: 0 pass, 110 fail (total: 110)
Arriba filter: 243 rows -> 15 PASS; wrote tih_rna_sample_00419_23H5VFLT4_s44.arriba.fusions.filtered.tsv and tih_rna_sample_00419_23H5VFLT4_s44.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00419_23H5VFLT4_s44.arriba.fusions.filter_summary.txt