AIH curated blacklist: matched 10 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 226
Pass (FILTER=PASS): 18 (8.0%)
Fail (FILTER=FAIL): 208 (92.0%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 10
All 10 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 50
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 35
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 23
confidence_below_min(low<high): 14
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 9
confidence_below_min(medium<high);aih_curated_blacklist: 6
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
total_reads_below_min(4.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 2
Breakdown by confidence:
high: 18 pass, 7 fail (total: 25)
low: 0 pass, 104 fail (total: 104)
medium: 0 pass, 97 fail (total: 97)
Arriba filter: 226 rows -> 18 PASS; wrote tih_rna_sample_00414_23H5VFLT4_s40.arriba.fusions.filtered.tsv and tih_rna_sample_00414_23H5VFLT4_s40.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00414_23H5VFLT4_s40.arriba.fusions.filter_summary.txt