.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (tih_rna_sample_00111_23H5VFLT4_s30)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3c/6e06b7a107bc1fe4c770fa21ec29d6/.command.log
Size: 1.2 KB
Task: NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (tih_rna_sample_00111_23H5VFLT4_s30)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/01/1202f898544a151af84f85ca475aaf/tih_rna_sample_00111_23H5VFLT4_s30_fusionreport_index.html
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3c/6e06b7a107bc1fe4c770fa21ec29d6/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/hgnc/hgnc_complete_set.txt
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/hgnc/HGNC-DB-timestamp.txt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/32/3171500a50c9bd5080263632153746/tih_rna_sample_00111_23H5VFLT4_s30.arriba.fusions.filtered_pass_only.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/93/e427108f336ced892ccc19cf371c32/tih_rna_sample_00111_23H5VFLT4_s30.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/28/392959925d0b521b862295add05c0e/tih_rna_sample_00111_23H5VFLT4_s30.FusionInspector.fusions.abridged.tsv.annotated.coding_effect
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3c/6e06b7a107bc1fe4c770fa21ec29d6/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/01/1202f898544a151af84f85ca475aaf/tih_rna_sample_00111_23H5VFLT4_s30.fusions.csv
==> STAGING COMPLETE (9 inputs)